Query 017388
Match_columns 372
No_of_seqs 227 out of 823
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:36:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 99.8 3.3E-18 1.1E-22 175.8 19.5 156 63-302 306-462 (490)
2 3edt_B KLC 2, kinesin light ch 99.7 3.1E-16 1.1E-20 141.3 22.6 160 64-307 41-201 (283)
3 3nf1_A KLC 1, kinesin light ch 99.7 1E-14 3.4E-19 133.8 23.2 160 64-307 25-185 (311)
4 3edt_B KLC 2, kinesin light ch 99.7 8.2E-15 2.8E-19 131.9 20.5 158 64-305 83-282 (283)
5 3nf1_A KLC 1, kinesin light ch 99.7 1.7E-14 5.7E-19 132.3 22.6 159 65-307 68-227 (311)
6 3qww_A SET and MYND domain-con 99.7 2.4E-15 8.2E-20 152.2 18.2 135 64-282 296-431 (433)
7 3vtx_A MAMA; tetratricopeptide 99.6 3.7E-15 1.3E-19 128.7 16.3 169 66-307 5-173 (184)
8 3ulq_A Response regulator aspa 99.6 9.7E-15 3.3E-19 141.2 17.8 151 69-307 106-256 (383)
9 3qwp_A SET and MYND domain-con 99.6 9.5E-15 3.3E-19 147.5 16.5 139 65-287 286-425 (429)
10 3ro3_A PINS homolog, G-protein 99.6 1.1E-13 3.6E-18 113.8 19.7 154 64-306 7-160 (164)
11 3q15_A PSP28, response regulat 99.6 1.7E-14 5.7E-19 139.7 17.2 155 65-307 100-254 (378)
12 3gw4_A Uncharacterized protein 99.6 1.1E-13 3.7E-18 120.0 20.5 156 65-308 25-180 (203)
13 3ulq_A Response regulator aspa 99.6 1E-13 3.5E-18 134.0 21.3 156 64-307 141-296 (383)
14 4gyw_A UDP-N-acetylglucosamine 99.6 7.3E-14 2.5E-18 149.6 18.6 172 64-310 7-180 (723)
15 3qww_A SET and MYND domain-con 99.6 1.9E-14 6.6E-19 145.6 13.0 109 204-312 310-419 (433)
16 3u3w_A Transcriptional activat 99.6 1.5E-13 5.3E-18 128.7 18.3 100 206-307 169-269 (293)
17 1qqe_A Vesicular transport pro 99.6 2.9E-13 9.9E-18 127.4 20.2 151 66-305 37-188 (292)
18 2qfc_A PLCR protein; TPR, HTH, 99.5 2.8E-13 9.6E-18 126.9 18.5 195 63-307 72-269 (293)
19 3q15_A PSP28, response regulat 99.5 6E-13 2.1E-17 128.7 20.9 154 63-305 138-291 (378)
20 2ifu_A Gamma-SNAP; membrane fu 99.5 4.8E-13 1.7E-17 126.7 18.9 57 66-124 35-92 (307)
21 3n71_A Histone lysine methyltr 99.5 6.6E-14 2.2E-18 143.8 13.2 110 204-313 321-431 (490)
22 3urz_A Uncharacterized protein 99.5 9.1E-13 3.1E-17 117.9 16.3 142 66-306 4-188 (208)
23 1qqe_A Vesicular transport pro 99.5 7.7E-13 2.6E-17 124.5 16.2 156 65-307 76-231 (292)
24 4gyw_A UDP-N-acetylglucosamine 99.5 9.8E-13 3.4E-17 140.9 18.9 137 66-267 43-179 (723)
25 4a1s_A PINS, partner of inscut 99.5 2.4E-12 8.2E-17 123.9 19.6 193 62-307 44-255 (411)
26 2pl2_A Hypothetical conserved 99.5 7.6E-13 2.6E-17 119.2 15.0 133 66-305 5-148 (217)
27 4a1s_A PINS, partner of inscut 99.5 2.3E-12 7.8E-17 124.0 19.3 99 205-306 99-214 (411)
28 2pl2_A Hypothetical conserved 99.5 2.3E-12 7.8E-17 116.0 16.9 144 66-306 39-182 (217)
29 3sf4_A G-protein-signaling mod 99.4 3.7E-12 1.3E-16 121.0 19.1 100 205-307 100-219 (406)
30 2ifu_A Gamma-SNAP; membrane fu 99.4 2.2E-12 7.5E-17 122.2 17.3 150 65-305 75-224 (307)
31 3qwp_A SET and MYND domain-con 99.4 2.4E-13 8.3E-18 137.2 10.3 108 205-312 300-408 (429)
32 4i17_A Hypothetical protein; T 99.4 4.3E-12 1.5E-16 113.3 17.4 141 67-307 8-149 (228)
33 3sf4_A G-protein-signaling mod 99.4 1E-11 3.5E-16 118.0 20.6 99 206-307 161-259 (406)
34 3ro2_A PINS homolog, G-protein 99.4 8.6E-12 3E-16 114.1 18.8 151 66-307 5-175 (338)
35 4i17_A Hypothetical protein; T 99.4 1.1E-12 3.7E-17 117.2 12.2 125 67-291 43-169 (228)
36 3ro2_A PINS homolog, G-protein 99.4 1.4E-11 4.6E-16 112.8 19.5 155 64-307 41-215 (338)
37 3uq3_A Heat shock protein STI1 99.4 1.7E-11 5.8E-16 109.0 19.6 149 64-306 3-170 (258)
38 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.7E-12 9.2E-17 112.7 13.0 143 62-306 2-152 (213)
39 4gcn_A Protein STI-1; structur 99.4 7.7E-12 2.6E-16 103.8 14.9 109 63-263 5-113 (127)
40 4gco_A Protein STI-1; structur 99.4 5.3E-12 1.8E-16 105.0 13.8 114 65-285 12-125 (126)
41 4gcn_A Protein STI-1; structur 99.4 8.2E-12 2.8E-16 103.7 14.9 90 207-304 23-112 (127)
42 4ga2_A E3 SUMO-protein ligase 99.4 4.8E-13 1.6E-17 114.2 7.3 129 71-306 2-131 (150)
43 1fch_A Peroxisomal targeting s 99.4 9.5E-12 3.2E-16 117.4 16.0 97 206-309 265-364 (368)
44 3u3w_A Transcriptional activat 99.4 2.6E-11 8.9E-16 113.5 18.6 100 206-307 129-228 (293)
45 2qfc_A PLCR protein; TPR, HTH, 99.4 1E-11 3.5E-16 116.2 15.7 99 206-307 129-228 (293)
46 3uq3_A Heat shock protein STI1 99.4 3.1E-11 1.1E-15 107.3 18.0 166 66-305 38-203 (258)
47 1a17_A Serine/threonine protei 99.4 2.9E-11 1E-15 100.9 16.5 142 60-306 7-148 (166)
48 4g1t_A Interferon-induced prot 99.4 2.4E-11 8E-16 119.3 18.2 147 66-304 51-204 (472)
49 3qky_A Outer membrane assembly 99.3 1.5E-11 5.1E-16 112.4 15.3 142 66-305 15-178 (261)
50 4eqf_A PEX5-related protein; a 99.3 3.5E-11 1.2E-15 114.2 18.4 88 203-305 188-277 (365)
51 2h6f_A Protein farnesyltransfe 99.3 7.2E-12 2.4E-16 124.3 13.9 159 64-307 95-272 (382)
52 4eqf_A PEX5-related protein; a 99.3 2.4E-11 8.1E-16 115.5 16.5 168 66-306 65-244 (365)
53 2vq2_A PILW, putative fimbrial 99.3 1.2E-10 4E-15 101.4 18.8 169 65-306 7-178 (225)
54 3qky_A Outer membrane assembly 99.3 8.3E-11 2.8E-15 107.4 18.4 170 66-321 52-250 (261)
55 2hr2_A Hypothetical protein; a 99.3 6.7E-11 2.3E-15 104.3 16.4 125 59-267 4-136 (159)
56 2ho1_A Type 4 fimbrial biogene 99.3 6.9E-11 2.4E-15 105.9 16.8 166 65-305 36-205 (252)
57 2fo7_A Synthetic consensus TPR 99.3 1.9E-10 6.4E-15 91.2 17.4 131 67-304 2-132 (136)
58 1fch_A Peroxisomal targeting s 99.3 8.2E-11 2.8E-15 110.9 17.8 66 232-305 216-281 (368)
59 3gyz_A Chaperone protein IPGC; 99.3 3.9E-12 1.3E-16 110.2 7.8 84 207-305 51-134 (151)
60 3u4t_A TPR repeat-containing p 99.3 3.9E-11 1.3E-15 108.5 14.4 175 66-307 74-253 (272)
61 3as5_A MAMA; tetratricopeptide 99.3 3.1E-10 1.1E-14 95.2 18.9 166 65-305 7-174 (186)
62 3gw4_A Uncharacterized protein 99.3 1.2E-10 4.1E-15 100.6 16.7 99 207-307 41-139 (203)
63 4abn_A Tetratricopeptide repea 99.3 2.3E-11 7.7E-16 122.9 13.9 176 66-305 102-288 (474)
64 1hz4_A MALT regulatory protein 99.3 2.1E-10 7.3E-15 109.6 20.0 153 65-306 13-166 (373)
65 3hym_B Cell division cycle pro 99.3 9E-11 3.1E-15 108.2 16.6 90 216-305 176-266 (330)
66 4gco_A Protein STI-1; structur 99.3 8E-11 2.7E-15 97.8 14.2 84 207-305 28-111 (126)
67 2r5s_A Uncharacterized protein 99.3 1.6E-11 5.4E-16 106.4 10.2 158 67-305 7-174 (176)
68 3qou_A Protein YBBN; thioredox 99.3 7E-11 2.4E-15 111.2 15.3 162 66-305 117-285 (287)
69 1w3b_A UDP-N-acetylglucosamine 99.3 1E-10 3.4E-15 112.2 16.3 166 66-306 67-234 (388)
70 1xnf_A Lipoprotein NLPI; TPR, 99.3 7.7E-11 2.6E-15 106.3 14.1 173 64-304 41-244 (275)
71 3upv_A Heat shock protein STI1 99.2 5.2E-10 1.8E-14 90.7 17.5 122 65-287 3-124 (126)
72 1p5q_A FKBP52, FK506-binding p 99.2 1.6E-10 5.6E-15 111.5 17.1 147 62-307 143-297 (336)
73 3as5_A MAMA; tetratricopeptide 99.2 1.3E-10 4.4E-15 97.6 14.2 86 206-306 56-141 (186)
74 3u4t_A TPR repeat-containing p 99.2 3.9E-11 1.3E-15 108.5 11.6 168 67-307 4-174 (272)
75 3cv0_A Peroxisome targeting si 99.2 1.7E-10 5.7E-15 106.2 15.5 145 66-309 172-320 (327)
76 2vq2_A PILW, putative fimbrial 99.2 4.7E-10 1.6E-14 97.5 17.5 167 66-304 42-211 (225)
77 1w3b_A UDP-N-acetylglucosamine 99.2 1.4E-10 4.7E-15 111.3 15.2 164 66-304 203-368 (388)
78 3hym_B Cell division cycle pro 99.2 6.6E-11 2.3E-15 109.1 12.4 173 66-306 125-301 (330)
79 2q7f_A YRRB protein; TPR, prot 99.2 5.5E-10 1.9E-14 98.7 17.4 166 66-306 57-224 (243)
80 3rkv_A Putative peptidylprolyl 99.2 2.9E-10 1E-14 96.6 14.9 114 59-263 4-127 (162)
81 2ho1_A Type 4 fimbrial biogene 99.2 4.8E-10 1.6E-14 100.3 16.8 167 66-305 71-239 (252)
82 1hz4_A MALT regulatory protein 99.2 6.7E-10 2.3E-14 106.1 18.8 153 64-305 51-204 (373)
83 2q7f_A YRRB protein; TPR, prot 99.2 7.3E-10 2.5E-14 97.9 17.5 167 65-306 22-190 (243)
84 2h6f_A Protein farnesyltransfe 99.2 1.1E-10 3.9E-15 115.6 13.4 153 66-306 131-300 (382)
85 2vgx_A Chaperone SYCD; alterna 99.2 1.8E-10 6.1E-15 98.1 12.5 85 207-306 36-120 (148)
86 4g1t_A Interferon-induced prot 99.2 3E-10 1E-14 111.4 14.6 155 66-305 247-402 (472)
87 2yhc_A BAMD, UPF0169 lipoprote 99.2 1E-09 3.5E-14 98.7 16.9 193 66-303 4-212 (225)
88 3sz7_A HSC70 cochaperone (SGT) 99.2 7.2E-10 2.4E-14 94.4 15.1 103 64-265 9-111 (164)
89 2vsy_A XCC0866; transferase, g 99.2 6E-10 2.1E-14 113.9 17.0 133 66-305 23-158 (568)
90 3ieg_A DNAJ homolog subfamily 99.1 1.5E-09 5.1E-14 100.7 17.8 137 65-305 2-150 (359)
91 3cv0_A Peroxisome targeting si 99.1 1.6E-09 5.5E-14 99.6 17.8 85 205-304 151-235 (327)
92 2vyi_A SGTA protein; chaperone 99.1 2.3E-09 7.8E-14 84.9 16.4 124 62-292 8-131 (131)
93 3fp2_A TPR repeat-containing p 99.1 1.3E-09 4.5E-14 108.0 17.5 59 59-125 18-76 (537)
94 2xpi_A Anaphase-promoting comp 99.1 1.8E-09 6.2E-14 108.8 18.6 173 66-306 407-581 (597)
95 2fbn_A 70 kDa peptidylprolyl i 99.1 7.3E-10 2.5E-14 97.3 13.6 39 58-96 30-68 (198)
96 3ro3_A PINS homolog, G-protein 99.1 2.3E-09 8E-14 87.5 15.7 99 206-307 23-121 (164)
97 1ouv_A Conserved hypothetical 99.1 1.7E-09 6E-14 98.8 16.6 162 66-304 6-179 (273)
98 2lni_A Stress-induced-phosphop 99.1 9.6E-10 3.3E-14 88.0 12.4 119 65-290 15-133 (133)
99 2pzi_A Probable serine/threoni 99.1 9.6E-11 3.3E-15 123.9 8.1 130 67-304 434-563 (681)
100 1xnf_A Lipoprotein NLPI; TPR, 99.1 9.6E-10 3.3E-14 99.0 13.6 127 76-305 15-141 (275)
101 2gw1_A Mitochondrial precursor 99.1 2.1E-09 7.1E-14 105.4 17.1 173 67-308 305-482 (514)
102 2hr2_A Hypothetical protein; a 99.1 1.8E-09 6.3E-14 95.1 14.9 100 206-306 25-133 (159)
103 3ieg_A DNAJ homolog subfamily 99.1 2.3E-09 7.8E-14 99.4 16.3 88 206-304 248-335 (359)
104 4ga2_A E3 SUMO-protein ligase 99.1 9E-10 3.1E-14 93.7 12.4 119 65-290 30-149 (150)
105 2xcb_A PCRH, regulatory protei 99.1 1.1E-09 3.9E-14 91.4 12.8 85 207-306 33-117 (142)
106 3sz7_A HSC70 cochaperone (SGT) 99.1 4.1E-09 1.4E-13 89.6 16.4 98 207-319 26-131 (164)
107 2e2e_A Formate-dependent nitri 99.1 1.3E-10 4.4E-15 99.8 6.7 128 70-304 14-144 (177)
108 3rkv_A Putative peptidylprolyl 99.1 1.8E-09 6.1E-14 91.7 13.8 92 206-305 25-127 (162)
109 1elr_A TPR2A-domain of HOP; HO 99.1 2.7E-09 9.4E-14 84.6 13.6 122 65-287 3-124 (131)
110 3upv_A Heat shock protein STI1 99.1 2.8E-09 9.5E-14 86.4 13.9 85 207-306 19-103 (126)
111 2xpi_A Anaphase-promoting comp 99.1 6E-09 2.1E-13 105.0 19.4 172 66-305 373-546 (597)
112 3gyz_A Chaperone protein IPGC; 99.1 2.1E-09 7.1E-14 92.9 13.7 100 65-263 35-134 (151)
113 4b4t_Q 26S proteasome regulato 99.1 5.3E-09 1.8E-13 101.3 18.0 155 64-307 53-207 (434)
114 2y4t_A DNAJ homolog subfamily 99.1 4.7E-09 1.6E-13 101.8 17.3 88 206-304 271-358 (450)
115 2y4t_A DNAJ homolog subfamily 99.0 1.1E-08 3.8E-13 99.1 19.5 166 65-305 25-207 (450)
116 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 2.4E-09 8.2E-14 107.8 14.9 137 62-297 264-407 (457)
117 3fp2_A TPR repeat-containing p 99.0 4.1E-09 1.4E-13 104.4 16.3 173 66-307 310-494 (537)
118 3q49_B STIP1 homology and U bo 99.0 1.8E-08 6.1E-13 81.8 16.8 102 66-266 9-110 (137)
119 1p5q_A FKBP52, FK506-binding p 99.0 1.7E-10 5.9E-15 111.3 5.0 128 78-305 125-260 (336)
120 1wao_1 Serine/threonine protei 99.0 5.9E-11 2E-15 120.5 1.7 130 64-300 4-135 (477)
121 2gw1_A Mitochondrial precursor 99.0 6.8E-09 2.3E-13 101.8 16.4 76 232-307 185-269 (514)
122 1elr_A TPR2A-domain of HOP; HO 99.0 1.2E-08 4.1E-13 80.8 14.6 90 207-304 19-108 (131)
123 1ihg_A Cyclophilin 40; ppiase 99.0 6.9E-09 2.3E-13 102.0 15.4 139 59-296 216-362 (370)
124 1ouv_A Conserved hypothetical 99.0 1.3E-08 4.6E-13 92.9 16.3 163 66-305 38-216 (273)
125 2if4_A ATFKBP42; FKBP-like, al 99.0 1.5E-09 5E-14 105.0 10.1 39 58-96 171-209 (338)
126 2vgx_A Chaperone SYCD; alterna 99.0 2.6E-08 9E-13 84.5 16.6 101 65-264 20-120 (148)
127 4abn_A Tetratricopeptide repea 99.0 2.3E-09 8E-14 108.1 11.0 139 67-301 171-318 (474)
128 2fbn_A 70 kDa peptidylprolyl i 98.9 2E-09 6.8E-14 94.4 9.1 91 207-305 53-152 (198)
129 4b4t_Q 26S proteasome regulato 98.9 3.9E-08 1.3E-12 95.2 19.0 151 69-307 98-248 (434)
130 1elw_A TPR1-domain of HOP; HOP 98.9 1.9E-08 6.5E-13 78.2 13.4 116 64-286 2-117 (118)
131 2pzi_A Probable serine/threoni 98.9 3E-09 1E-13 112.4 11.3 129 77-305 402-530 (681)
132 2vsy_A XCC0866; transferase, g 98.9 4.6E-09 1.6E-13 107.3 12.2 120 79-305 2-121 (568)
133 3q49_B STIP1 homology and U bo 98.9 1.9E-08 6.7E-13 81.6 13.6 86 207-307 24-109 (137)
134 2xcb_A PCRH, regulatory protei 98.9 2.3E-08 7.9E-13 83.4 14.3 102 65-265 17-118 (142)
135 1na0_A Designed protein CTPR3; 98.9 5.8E-08 2E-12 76.0 15.8 116 66-288 9-124 (125)
136 3rjv_A Putative SEL1 repeat pr 98.9 2.1E-08 7.2E-13 89.8 14.2 44 66-119 18-61 (212)
137 3mkr_A Coatomer subunit epsilo 98.9 5.1E-08 1.7E-12 92.1 17.5 155 66-305 101-265 (291)
138 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 8.3E-10 2.8E-14 111.2 5.4 127 78-304 246-380 (457)
139 2c2l_A CHIP, carboxy terminus 98.9 6.7E-09 2.3E-13 97.4 11.1 102 66-266 4-105 (281)
140 1hxi_A PEX5, peroxisome target 98.9 1.4E-08 4.9E-13 83.3 11.2 99 68-265 19-117 (121)
141 2dba_A Smooth muscle cell asso 98.9 3.9E-08 1.3E-12 80.1 13.1 119 65-287 27-145 (148)
142 1zu2_A Mitochondrial import re 98.9 5E-09 1.7E-13 92.2 8.0 99 78-265 14-123 (158)
143 2xev_A YBGF; tetratricopeptide 98.8 1.5E-07 5.1E-12 75.5 15.8 117 68-282 4-120 (129)
144 3k9i_A BH0479 protein; putativ 98.8 7.5E-09 2.6E-13 83.5 7.2 88 206-305 4-91 (117)
145 1zu2_A Mitochondrial import re 98.8 2.5E-09 8.6E-14 94.1 4.6 86 214-307 17-123 (158)
146 3mkr_A Coatomer subunit epsilo 98.8 1.1E-07 3.9E-12 89.6 16.0 172 66-312 65-237 (291)
147 3vtx_A MAMA; tetratricopeptide 98.8 2.5E-08 8.6E-13 85.4 10.4 135 66-265 39-173 (184)
148 2lni_A Stress-induced-phosphop 98.8 8.7E-08 3E-12 76.4 12.9 80 218-305 35-114 (133)
149 2kat_A Uncharacterized protein 98.8 4E-08 1.4E-12 78.5 10.3 82 218-307 4-85 (115)
150 2xev_A YBGF; tetratricopeptide 98.8 5.2E-08 1.8E-12 78.2 10.7 91 206-305 16-106 (129)
151 1na0_A Designed protein CTPR3; 98.7 1.9E-07 6.5E-12 73.0 13.3 84 207-305 24-107 (125)
152 2vyi_A SGTA protein; chaperone 98.7 2.2E-07 7.5E-12 73.2 13.8 84 207-305 27-110 (131)
153 2ond_A Cleavage stimulation fa 98.7 1.7E-07 5.8E-12 88.1 14.3 85 217-305 187-271 (308)
154 3ma5_A Tetratricopeptide repea 98.7 4.3E-08 1.5E-12 77.4 8.6 70 230-307 4-73 (100)
155 4f3v_A ESX-1 secretion system 98.7 4.3E-07 1.5E-11 86.9 16.9 206 64-320 5-251 (282)
156 1hxi_A PEX5, peroxisome target 98.7 1.3E-08 4.6E-13 83.5 5.3 85 206-305 31-115 (121)
157 1hh8_A P67PHOX, NCF-2, neutrop 98.7 1.4E-07 4.8E-12 82.3 12.1 107 66-264 37-152 (213)
158 3rjv_A Putative SEL1 repeat pr 98.7 5.5E-07 1.9E-11 80.5 15.1 132 66-304 50-197 (212)
159 1ihg_A Cyclophilin 40; ppiase 98.6 2.4E-07 8.2E-12 91.0 13.1 91 207-305 238-337 (370)
160 2c2l_A CHIP, carboxy terminus 98.6 2E-07 6.7E-12 87.3 11.4 86 206-306 18-103 (281)
161 2dba_A Smooth muscle cell asso 98.6 2.4E-07 8.3E-12 75.3 10.4 82 216-305 45-129 (148)
162 2kck_A TPR repeat; tetratricop 98.6 1.7E-07 5.9E-12 72.1 9.0 97 68-263 8-107 (112)
163 2l6j_A TPR repeat-containing p 98.6 1.2E-07 4.2E-12 73.8 8.2 67 232-306 3-69 (111)
164 1a17_A Serine/threonine protei 98.6 2.2E-07 7.4E-12 77.1 9.6 86 206-306 27-112 (166)
165 2ond_A Cleavage stimulation fa 98.6 5.4E-07 1.9E-11 84.6 13.5 85 215-307 115-201 (308)
166 3urz_A Uncharacterized protein 98.6 1.2E-07 4E-12 84.4 7.8 85 206-305 18-118 (208)
167 1elw_A TPR1-domain of HOP; HOP 98.5 2.3E-07 8E-12 71.9 8.4 84 206-304 18-101 (118)
168 2kck_A TPR repeat; tetratricop 98.5 1.9E-07 6.3E-12 71.9 7.4 86 206-304 20-106 (112)
169 1na3_A Designed protein CTPR2; 98.5 4.4E-07 1.5E-11 68.1 9.3 68 230-305 6-73 (91)
170 2e2e_A Formate-dependent nitri 98.5 2.3E-06 8E-11 72.8 14.8 101 66-264 44-146 (177)
171 3k9i_A BH0479 protein; putativ 98.5 3.5E-07 1.2E-11 73.5 8.7 90 78-263 2-91 (117)
172 2xm6_A Protein corresponding t 98.5 2.7E-06 9.3E-11 84.9 16.6 164 65-304 38-216 (490)
173 2xm6_A Protein corresponding t 98.5 2.7E-06 9.3E-11 84.9 16.3 80 207-305 346-433 (490)
174 1wao_1 Serine/threonine protei 98.4 7.3E-07 2.5E-11 90.3 10.3 86 205-305 19-104 (477)
175 2l6j_A TPR repeat-containing p 98.4 7.5E-08 2.6E-12 75.0 2.1 101 65-258 3-103 (111)
176 2fo7_A Synthetic consensus TPR 98.3 3.5E-06 1.2E-10 66.0 9.5 86 206-306 15-100 (136)
177 2if4_A ATFKBP42; FKBP-like, al 98.3 7.3E-07 2.5E-11 85.9 6.5 96 204-307 191-296 (338)
178 3e4b_A ALGK; tetratricopeptide 98.2 5.2E-06 1.8E-10 83.0 11.5 78 206-304 265-351 (452)
179 2v5f_A Prolyl 4-hydroxylase su 98.2 7.6E-06 2.6E-10 65.4 10.2 72 233-305 5-76 (104)
180 2kc7_A BFR218_protein; tetratr 98.2 3.1E-06 1.1E-10 65.1 7.3 63 236-306 3-66 (99)
181 2ooe_A Cleavage stimulation fa 98.2 2.5E-05 8.4E-10 78.8 15.7 163 68-307 323-495 (530)
182 2yhc_A BAMD, UPF0169 lipoprote 98.2 4.8E-06 1.6E-10 74.5 8.9 90 206-304 18-125 (225)
183 2kat_A Uncharacterized protein 98.2 1.5E-05 5.1E-10 63.2 10.8 53 207-266 34-86 (115)
184 3ly7_A Transcriptional activat 98.2 6.2E-05 2.1E-09 74.5 17.0 141 66-304 196-339 (372)
185 1klx_A Cysteine rich protein B 98.2 1.2E-05 4.2E-10 67.3 10.3 75 211-304 44-126 (138)
186 3e4b_A ALGK; tetratricopeptide 98.1 2.1E-05 7.3E-10 78.5 13.5 77 216-305 304-388 (452)
187 2ooe_A Cleavage stimulation fa 98.1 1.8E-05 6.2E-10 79.7 12.7 85 215-307 337-423 (530)
188 1xi4_A Clathrin heavy chain; a 98.1 3.9E-05 1.3E-09 86.9 15.1 163 64-304 1066-1250(1630)
189 2r5s_A Uncharacterized protein 98.0 3.8E-06 1.3E-10 72.1 5.1 91 215-305 22-138 (176)
190 1na3_A Designed protein CTPR2; 98.0 7.4E-05 2.5E-09 55.6 11.6 49 65-121 8-56 (91)
191 1pc2_A Mitochondria fission pr 98.0 4.4E-05 1.5E-09 66.5 11.0 99 213-318 12-116 (152)
192 3qou_A Protein YBBN; thioredox 97.9 1.9E-05 6.4E-10 73.8 7.7 89 216-305 134-249 (287)
193 3u64_A Protein TP_0956; tetrat 97.9 0.00033 1.1E-08 67.3 15.3 88 205-304 176-269 (301)
194 3ma5_A Tetratricopeptide repea 97.8 0.00023 7.9E-09 55.6 11.0 48 66-121 7-54 (100)
195 1dce_A Protein (RAB geranylger 97.7 0.00029 1E-08 73.1 13.5 150 59-305 21-174 (567)
196 1xi4_A Clathrin heavy chain; a 97.6 0.0008 2.8E-08 76.4 14.9 87 215-309 1211-1314(1630)
197 2kc7_A BFR218_protein; tetratr 97.5 5.4E-05 1.8E-09 58.0 3.8 76 206-304 14-90 (99)
198 3dra_A Protein farnesyltransfe 97.5 0.0019 6.4E-08 62.0 15.2 136 65-305 31-176 (306)
199 3ffl_A Anaphase-promoting comp 97.5 0.0008 2.7E-08 59.3 11.0 95 206-300 34-147 (167)
200 1b89_A Protein (clathrin heavy 97.4 5.5E-05 1.9E-09 76.7 3.0 55 234-304 123-177 (449)
201 4f3v_A ESX-1 secretion system 97.3 0.0012 4.2E-08 62.8 11.0 52 206-263 185-238 (282)
202 1dce_A Protein (RAB geranylger 97.3 0.00083 2.8E-08 69.6 10.5 135 66-305 63-222 (567)
203 3bee_A Putative YFRE protein; 97.3 0.00044 1.5E-08 54.6 6.4 66 230-303 3-71 (93)
204 3dss_A Geranylgeranyl transfer 97.3 0.0054 1.9E-07 59.6 15.1 143 65-304 28-174 (331)
205 2v5f_A Prolyl 4-hydroxylase su 97.2 0.0014 4.8E-08 51.9 8.7 70 205-282 18-87 (104)
206 1klx_A Cysteine rich protein B 97.2 0.001 3.6E-08 55.3 8.0 78 206-304 9-90 (138)
207 3dra_A Protein farnesyltransfe 97.1 0.0053 1.8E-07 58.9 13.4 140 66-305 67-216 (306)
208 1nzn_A CGI-135 protein, fissio 97.1 0.0077 2.6E-07 50.7 12.3 106 209-318 11-119 (126)
209 3mv2_B Coatomer subunit epsilo 96.8 0.028 9.5E-07 54.2 15.3 171 67-304 101-282 (310)
210 3bee_A Putative YFRE protein; 96.8 0.011 3.9E-07 46.3 10.3 64 209-284 26-89 (93)
211 1b89_A Protein (clathrin heavy 96.7 0.0024 8.2E-08 64.7 7.5 61 233-305 177-237 (449)
212 3q7a_A Farnesyltransferase alp 96.5 0.012 4E-07 57.7 10.0 132 68-305 55-197 (349)
213 3q7a_A Farnesyltransferase alp 96.4 0.034 1.2E-06 54.4 12.9 135 67-306 89-239 (349)
214 3dss_A Geranylgeranyl transfer 96.2 0.032 1.1E-06 54.1 11.5 134 68-306 66-224 (331)
215 3o48_A Mitochondria fission 1 95.7 0.054 1.8E-06 46.0 9.2 88 213-305 21-108 (134)
216 3ffl_A Anaphase-promoting comp 95.6 0.32 1.1E-05 42.7 14.2 108 66-257 20-146 (167)
217 1y8m_A FIS1; mitochondria, unk 95.5 0.095 3.3E-06 44.9 9.9 86 215-305 22-107 (144)
218 3txn_A 26S proteasome regulato 95.4 0.14 4.9E-06 50.8 12.4 100 204-305 111-211 (394)
219 1pc2_A Mitochondria fission pr 94.9 0.027 9.3E-07 48.8 5.0 59 206-264 34-102 (152)
220 2ff4_A Probable regulatory pro 94.7 0.49 1.7E-05 46.3 14.0 78 233-318 171-256 (388)
221 3u64_A Protein TP_0956; tetrat 94.4 0.16 5.5E-06 48.6 9.3 65 206-279 218-284 (301)
222 4b4t_P 26S proteasome regulato 94.3 1.8 6E-05 43.2 17.3 117 63-266 134-251 (445)
223 1ya0_A SMG-7 transcript varian 93.4 0.15 5.2E-06 52.1 7.7 64 233-304 152-215 (497)
224 4e6h_A MRNA 3'-END-processing 93.0 1.5 5.3E-05 46.2 14.9 94 206-306 392-501 (679)
225 3txn_A 26S proteasome regulato 92.3 5.5 0.00019 39.3 17.0 58 206-263 153-211 (394)
226 3mv2_B Coatomer subunit epsilo 92.2 0.22 7.4E-06 47.9 6.4 83 218-306 85-167 (310)
227 2cpt_A SKD1 protein, vacuolar 91.9 1.2 4.2E-05 36.6 9.8 62 61-122 13-76 (117)
228 2o8p_A 14-3-3 domain containin 91.7 1.1 3.7E-05 41.2 10.2 72 232-305 126-198 (227)
229 3ly7_A Transcriptional activat 91.7 0.29 1E-05 48.2 6.9 88 216-305 216-307 (372)
230 2w2u_A Hypothetical P60 katani 91.4 0.43 1.5E-05 36.9 6.2 53 59-111 12-65 (83)
231 1o9d_A 14-3-3-like protein C; 90.8 1.5 5E-05 41.1 10.4 74 232-305 131-208 (260)
232 4b4t_R RPN7, 26S proteasome re 90.8 0.34 1.1E-05 48.2 6.4 86 217-304 149-237 (429)
233 1wfd_A Hypothetical protein 15 90.3 2.6 9E-05 33.0 9.9 59 61-119 10-69 (93)
234 3iqu_A 14-3-3 protein sigma; s 90.2 1.5 5E-05 40.5 9.7 73 232-304 129-205 (236)
235 4b4t_R RPN7, 26S proteasome re 90.2 1.4 4.6E-05 43.7 10.2 68 230-302 128-195 (429)
236 2v6y_A AAA family ATPase, P60 90.2 0.63 2.2E-05 35.9 6.1 51 62-112 7-58 (83)
237 2v6x_A Vacuolar protein sortin 90.0 2 6.8E-05 32.9 8.9 61 61-121 8-69 (85)
238 4h7y_A Dual specificity protei 89.8 0.53 1.8E-05 40.9 5.9 106 207-321 34-140 (161)
239 2crb_A Nuclear receptor bindin 89.7 3.8 0.00013 32.4 10.2 78 230-319 12-91 (97)
240 2br9_A 14-3-3E, 14-3-3 protein 89.5 1.6 5.3E-05 40.3 9.3 72 232-303 126-201 (234)
241 4b4t_S RPN3, 26S proteasome re 89.2 1.3 4.4E-05 45.5 9.2 68 230-303 228-298 (523)
242 4a5x_A MITD1, MIT domain-conta 89.2 2.8 9.7E-05 32.4 9.2 50 64-113 14-64 (86)
243 2crb_A Nuclear receptor bindin 88.5 1.4 4.9E-05 34.8 7.0 41 62-102 11-51 (97)
244 1nzn_A CGI-135 protein, fissio 88.4 1.8 6.2E-05 36.1 8.1 59 206-264 37-105 (126)
245 3uzd_A 14-3-3 protein gamma; s 88.3 1.8 6.1E-05 40.2 8.8 73 232-304 127-203 (248)
246 4e6h_A MRNA 3'-END-processing 88.1 1.1 3.9E-05 47.3 8.3 84 218-309 328-412 (679)
247 3mkq_B Coatomer subunit alpha; 87.5 1.3 4.6E-05 39.0 7.1 90 206-300 10-114 (177)
248 2npm_A 14-3-3 domain containin 86.7 2.6 8.9E-05 39.4 8.9 71 232-303 152-226 (260)
249 4gns_B Protein CSD3, chitin bi 85.2 1.2 4.1E-05 47.7 6.6 61 233-301 337-397 (754)
250 3ubw_A 14-3-3E, 14-3-3 protein 85.1 3.3 0.00011 38.7 8.8 73 232-304 152-228 (261)
251 3mkq_A Coatomer beta'-subunit; 84.6 2.6 9E-05 43.4 8.8 48 207-259 658-707 (814)
252 2vkj_A TM1634; membrane protei 83.8 6.2 0.00021 31.1 8.4 52 64-121 51-103 (106)
253 3c3r_A Programmed cell death 6 83.2 13 0.00045 36.2 12.7 58 251-308 240-308 (380)
254 1zb1_A BRO1 protein; AIP1, BRO 82.9 9.8 0.00034 37.2 11.7 57 251-307 217-289 (392)
255 2xs1_A Programmed cell death 6 81.8 14 0.00049 38.9 13.2 57 251-307 225-292 (704)
256 4a5x_A MITD1, MIT domain-conta 81.5 8.8 0.0003 29.5 8.6 36 274-309 15-50 (86)
257 3efz_A 14-3-3 protein; 14-3-3, 80.8 3.8 0.00013 38.5 7.3 72 232-303 148-225 (268)
258 4b4t_P 26S proteasome regulato 80.8 6.7 0.00023 39.0 9.7 101 203-306 148-249 (445)
259 1y8m_A FIS1; mitochondria, unk 80.7 11 0.00038 32.0 9.6 58 206-263 41-107 (144)
260 3r9m_A BRO1 domain-containing 80.4 20 0.00067 34.9 12.7 38 274-311 252-289 (376)
261 2rpa_A Katanin P60 ATPase-cont 79.6 2.7 9.2E-05 32.2 4.9 36 278-313 15-50 (78)
262 2v6x_A Vacuolar protein sortin 79.4 14 0.0005 27.9 9.2 37 273-309 11-47 (85)
263 3o48_A Mitochondria fission 1 78.9 3.5 0.00012 34.7 5.8 59 206-264 42-109 (134)
264 2cpt_A SKD1 protein, vacuolar 78.3 18 0.00063 29.4 10.0 58 245-320 30-87 (117)
265 4b4t_O 26S proteasome regulato 77.2 21 0.00072 34.7 11.9 99 206-304 90-198 (393)
266 2v6y_A AAA family ATPase, P60 74.8 5.7 0.0002 30.4 5.6 36 275-310 11-46 (83)
267 2w2u_A Hypothetical P60 katani 74.2 6 0.00021 30.3 5.6 36 274-309 18-53 (83)
268 2uy1_A Cleavage stimulation fa 74.2 32 0.0011 34.2 12.6 78 215-301 302-380 (493)
269 1wfd_A Hypothetical protein 15 69.6 37 0.0013 26.3 9.9 24 244-267 26-49 (93)
270 3re2_A Predicted protein; meni 69.1 14 0.00047 36.4 8.0 72 232-306 254-327 (472)
271 4g26_A Pentatricopeptide repea 65.2 29 0.00099 34.7 10.0 22 74-95 34-55 (501)
272 2ymb_A MITD1, MIT domain-conta 65.0 1.3 4.6E-05 41.3 0.0 62 60-121 17-79 (257)
273 1om2_A Protein (mitochondrial 64.9 19 0.00063 28.5 6.7 39 58-96 12-50 (95)
274 3ax2_A Mitochondrial import re 63.6 17 0.00058 27.3 6.0 36 60-95 11-46 (73)
275 1fxk_C Protein (prefoldin); ar 63.5 1.9 6.6E-05 35.6 0.7 79 240-318 18-113 (133)
276 4gq4_A Menin; tumor suppressor 61.1 23 0.0008 35.3 8.0 72 232-306 261-334 (489)
277 2xze_A STAM-binding protein; h 60.9 40 0.0014 28.4 8.6 40 230-269 37-76 (146)
278 2rpa_A Katanin P60 ATPase-cont 60.9 9.5 0.00032 29.1 4.1 41 63-103 9-49 (78)
279 4h7y_A Dual specificity protei 60.0 18 0.00061 31.3 6.2 50 207-263 75-124 (161)
280 4g26_A Pentatricopeptide repea 59.8 23 0.00078 35.5 8.1 63 233-302 140-202 (501)
281 4gns_B Protein CSD3, chitin bi 59.3 9.4 0.00032 40.8 5.3 55 68-130 339-393 (754)
282 3esl_A Checkpoint serine/threo 54.0 91 0.0031 27.8 10.1 100 213-319 58-166 (202)
283 1om2_A Protein (mitochondrial 53.8 15 0.00051 29.0 4.3 28 237-264 24-51 (95)
284 3u84_A Menin; MLL, JUND, ledgf 52.6 30 0.001 34.6 7.1 71 232-306 276-349 (550)
285 3myv_A SUSD superfamily protei 51.8 19 0.00065 35.6 5.8 56 249-304 164-219 (454)
286 3mkq_A Coatomer beta'-subunit; 50.0 1.9E+02 0.0066 29.2 13.3 36 73-121 659-694 (814)
287 2xze_A STAM-binding protein; h 49.6 24 0.00082 29.8 5.3 47 59-106 33-79 (146)
288 1ya0_A SMG-7 transcript varian 49.0 9.9 0.00034 38.6 3.3 57 206-262 159-215 (497)
289 3mkq_B Coatomer subunit alpha; 48.2 32 0.0011 30.0 6.0 53 242-307 14-66 (177)
290 2rkl_A Vacuolar protein sortin 47.8 51 0.0017 23.2 5.8 39 59-97 13-51 (53)
291 3kez_A Putative sugar binding 47.7 20 0.00068 35.5 5.2 56 249-304 170-225 (461)
292 3ax2_A Mitochondrial import re 47.6 15 0.0005 27.7 3.2 28 236-263 20-47 (73)
293 3na7_A HP0958; flagellar bioge 46.7 1.7E+02 0.0057 26.5 11.3 27 291-317 58-84 (256)
294 3iqc_A FLIS, flagellar protein 46.2 1.1E+02 0.0036 25.2 8.7 44 63-106 33-76 (131)
295 1deq_A Fibrinogen (alpha chain 46.1 1.9E+02 0.0064 28.3 11.5 70 246-318 62-131 (390)
296 2wvi_A Mitotic checkpoint seri 45.7 49 0.0017 28.5 6.7 80 213-305 44-126 (164)
297 2uy1_A Cleavage stimulation fa 44.9 66 0.0023 31.9 8.6 44 219-262 199-242 (493)
298 4a1g_A Mitotic checkpoint seri 43.5 45 0.0015 28.4 6.1 80 213-305 49-131 (152)
299 2wb7_A PT26-6P; extra chromoso 43.2 42 0.0014 34.2 6.6 43 249-291 448-490 (526)
300 3spa_A Mtrpol, DNA-directed RN 42.4 1.3E+02 0.0044 33.6 10.8 63 233-302 165-228 (1134)
301 3mcx_A SUSD superfamily protei 42.1 23 0.00079 35.1 4.7 56 249-304 176-231 (477)
302 2dl1_A Spartin; SPG20, MIT, st 40.9 1.1E+02 0.0037 24.9 7.7 75 233-317 22-99 (116)
303 4fm3_A Uncharacterized hypothe 40.3 79 0.0027 25.0 6.6 65 230-310 31-95 (98)
304 3snx_A SUSD homolog, putative 39.9 37 0.0013 33.6 5.8 55 250-304 161-220 (460)
305 2wpv_A GET4, UPF0363 protein Y 38.8 2.5E+02 0.0087 26.4 20.0 90 214-303 115-216 (312)
306 2oo2_A Hypothetical protein AF 38.3 46 0.0016 25.7 4.8 33 60-92 29-61 (86)
307 1vh6_A Flagellar protein FLIS; 38.2 61 0.0021 27.2 6.1 58 63-120 30-93 (145)
308 2pmr_A Uncharacterized protein 37.5 48 0.0016 25.6 4.8 36 59-94 32-67 (87)
309 3spa_A Mtrpol, DNA-directed RN 37.5 61 0.0021 36.2 7.3 68 231-302 125-192 (1134)
310 1o3u_A Conserved hypothetical 37.2 70 0.0024 26.0 6.2 37 62-98 12-48 (135)
311 2a9u_A Ubiquitin carboxyl-term 36.0 1.9E+02 0.0066 24.2 8.9 42 231-274 40-81 (144)
312 3lew_A SUSD-like carbohydrate 35.7 53 0.0018 32.8 6.2 56 249-304 174-232 (495)
313 1wol_A ST0689, 122AA long cons 35.3 76 0.0026 25.1 6.0 37 62-98 7-43 (122)
314 2rkl_A Vacuolar protein sortin 35.2 75 0.0026 22.3 5.0 34 232-265 19-52 (53)
315 2ff4_A Probable regulatory pro 35.1 2.9E+02 0.0099 26.2 11.3 48 66-121 171-218 (388)
316 2zan_A Vacuolar protein sortin 34.7 8.2 0.00028 38.2 0.0 38 62-99 7-44 (444)
317 2wq1_A General control protein 33.7 19 0.00066 22.8 1.6 17 348-364 16-32 (33)
318 2hsb_A Hypothetical UPF0332 pr 33.5 88 0.003 24.6 6.2 36 61-96 7-42 (126)
319 4aez_C MAD3, mitotic spindle c 33.0 44 0.0015 30.3 4.6 90 213-315 98-197 (223)
320 4fhn_B Nucleoporin NUP120; pro 32.3 93 0.0032 34.4 8.0 70 236-305 845-929 (1139)
321 3kae_A CDC27, possible protein 31.9 2.7E+02 0.0093 24.7 10.7 72 231-304 60-143 (242)
322 1ufb_A TT1696 protein; structu 31.6 79 0.0027 25.0 5.6 36 62-97 7-42 (127)
323 3rau_A Tyrosine-protein phosph 31.4 1E+02 0.0034 29.7 7.2 36 273-308 250-285 (363)
324 2wm9_A Dedicator of cytokinesi 31.3 3E+02 0.01 26.9 10.8 74 234-307 12-120 (428)
325 2zdi_C Prefoldin subunit alpha 30.5 84 0.0029 26.1 5.7 34 285-318 90-123 (151)
326 2jpu_A ORF C02003 protein; sol 30.1 52 0.0018 27.3 4.2 38 63-100 4-41 (129)
327 3c3g_A Alpha/beta peptide with 29.4 34 0.0012 21.6 2.2 17 348-364 16-32 (33)
328 3mv2_A Coatomer subunit alpha; 29.2 1.7E+02 0.0059 27.9 8.2 49 62-110 110-158 (325)
329 1orj_A Flagellar protein FLIS; 28.8 1E+02 0.0034 25.4 5.8 42 63-104 26-71 (130)
330 4abx_A DNA repair protein RECN 28.5 78 0.0027 27.0 5.3 74 212-292 69-142 (175)
331 1kd8_B GABH BLL, GCN4 acid bas 28.1 58 0.002 21.0 3.1 18 348-365 17-34 (36)
332 3hdx_A SUSD homolog, SUSD supe 27.4 80 0.0027 31.1 5.9 31 274-304 196-226 (478)
333 3mkr_B Coatomer subunit alpha; 27.3 69 0.0024 30.6 5.1 35 62-96 98-132 (320)
334 2dl1_A Spartin; SPG20, MIT, st 27.1 81 0.0028 25.7 4.7 30 276-305 23-52 (116)
335 3c3f_A Alpha/beta peptide with 27.0 40 0.0014 21.4 2.2 17 348-364 17-33 (34)
336 2e2a_A Protein (enzyme IIA); h 26.5 1.3E+02 0.0044 23.9 5.8 35 65-99 19-53 (105)
337 1wcr_A PTS system, N, N'-diace 26.1 1.3E+02 0.0046 23.7 5.8 35 65-99 17-51 (103)
338 3eab_A Spastin; spastin, MIT, 25.8 72 0.0025 24.8 4.0 33 274-306 15-50 (89)
339 1lq7_A Alpha3W; three helix bu 24.5 53 0.0018 23.1 2.7 17 305-321 30-46 (67)
340 3swy_A Cyclic nucleotide-gated 24.4 1.6E+02 0.0056 19.9 5.1 30 289-318 1-30 (46)
341 3s4r_A Vimentin; alpha-helix, 24.2 1.3E+02 0.0043 23.3 5.2 41 304-369 53-93 (93)
342 3o10_A Sacsin; all-helical dom 24.1 85 0.0029 25.9 4.5 37 63-99 13-49 (141)
343 2oxj_A Hybrid alpha/beta pepti 23.9 51 0.0017 21.0 2.3 16 348-363 17-32 (34)
344 4gq2_M Nucleoporin NUP120; bet 23.9 1E+02 0.0034 33.6 6.2 27 233-260 841-867 (950)
345 2vkj_A TM1634; membrane protei 23.8 2.3E+02 0.008 22.1 6.5 48 232-285 52-100 (106)
346 3jq1_A SUSD superfamily protei 23.6 59 0.002 32.3 4.1 51 251-303 156-208 (481)
347 3k1s_A PTS system, cellobiose- 23.5 1.6E+02 0.0054 23.6 5.8 35 65-99 21-55 (109)
348 1qsa_A Protein (soluble lytic 23.4 2E+02 0.007 29.6 8.2 63 241-312 293-355 (618)
349 3l8r_A PTCA, putative PTS syst 23.3 1.6E+02 0.0053 24.1 5.8 35 65-99 36-70 (120)
350 2bni_A General control protein 23.2 49 0.0017 21.1 2.1 17 348-364 17-33 (34)
351 2cfu_A SDSA1; SDS-hydrolase, l 23.0 1.6E+02 0.0056 30.5 7.5 52 66-125 449-500 (658)
352 4fx5_A VON willebrand factor t 22.9 1.2E+02 0.0041 30.1 6.1 37 63-99 379-415 (464)
353 2zqm_A Prefoldin beta subunit 22.8 58 0.002 25.5 3.1 76 236-317 19-94 (117)
354 2pjw_V Vacuolar protein sortin 22.3 1.6E+02 0.0056 22.8 5.5 53 248-304 31-83 (91)
355 3i4g_A SUSD-like carbohydrate 22.1 1.1E+02 0.0037 30.8 5.7 29 275-303 198-226 (528)
356 1kd8_A GABH AIV, GCN4 acid bas 22.0 61 0.0021 20.9 2.4 19 348-366 17-35 (36)
357 3qnk_A Putative lipoprotein; a 21.9 1.1E+02 0.0038 30.5 5.7 54 250-303 154-210 (517)
358 4b4t_O 26S proteasome regulato 21.4 4.3E+02 0.015 25.2 9.7 57 206-262 141-198 (393)
359 2a9u_A Ubiquitin carboxyl-term 20.8 2E+02 0.0067 24.1 6.1 47 61-109 37-83 (144)
360 1zme_C Proline utilization tra 20.7 90 0.0031 21.9 3.5 25 348-372 46-70 (70)
361 3m48_A General control protein 20.5 61 0.0021 20.5 2.1 16 348-363 16-31 (33)
362 3t5x_A PCI domain-containing p 20.4 94 0.0032 27.2 4.3 33 273-305 12-44 (203)
363 2hy6_A General control protein 20.3 64 0.0022 20.5 2.2 17 348-364 17-33 (34)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.79 E-value=3.3e-18 Score=175.81 Aligned_cols=156 Identities=15% Similarity=0.023 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~ 142 (372)
+..+..++.....+..+|+|++|..+|.++|+++.+.+|+.||.++.+|+++|.+|..+
T Consensus 306 l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~--------------------- 364 (490)
T 3n71_A 306 IQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL--------------------- 364 (490)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh---------------------
Confidence 55678888999999999999999999999999999999999999999999999999855
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
++++.|..+++.|+.|+
T Consensus 365 ---------------------------------------------------------------g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 365 ---------------------------------------------------------------QAYEEASHYARRMVDGY 381 (490)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------cCHHHHHHHHHHHHHHH
Confidence 37888999999999999
Q ss_pred HHhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 223 EKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 223 ek~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
++.++. ++.+|.+|++||.+|..+|+|++|+..|++||+|++..+|++||.+++++.+|+.++..+++|++|...|+++
T Consensus 382 ~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 382 MKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999884 7999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 017388 302 I 302 (372)
Q Consensus 302 l 302 (372)
.
T Consensus 462 ~ 462 (490)
T 3n71_A 462 R 462 (490)
T ss_dssp H
T ss_pred H
Confidence 4
No 2
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.74 E-value=3.1e-16 Score=141.26 Aligned_cols=160 Identities=20% Similarity=0.186 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+++++....+|..+|..+.+|+.+|.+++..
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------------- 98 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR---------------------- 98 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHh----------------------
Confidence 3467788999999999999999999999999999999999999999999999999844
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|..+++.|+.++.
T Consensus 99 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 99 --------------------------------------------------------------GKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHHHH
Confidence 378889999999999998
Q ss_pred HhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 224 k~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
+..+. .+..+.+|.+||.++...|+|++|+..|++++.+.+...+++++..+.++++||.+|...|++++|+.+|++++
T Consensus 117 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 117 KVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 87664 47899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 017388 303 SVCKS 307 (372)
Q Consensus 303 ~i~~~ 307 (372)
.+...
T Consensus 197 ~~~~~ 201 (283)
T 3edt_B 197 TRAHE 201 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98655
No 3
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.67 E-value=1e-14 Score=133.76 Aligned_cols=160 Identities=19% Similarity=0.136 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+++++.....|..+|..+.+++.+|.+++..
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 82 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQ---------------------- 82 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC----------------------
Confidence 4577899999999999999999999999999999999999999999999999999855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|..+++.++.++.
T Consensus 83 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 83 --------------------------------------------------------------NKYKDAANLLNDALAIRE 100 (311)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 367888999999999988
Q ss_pred HhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 224 k~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
+..+. .+..+.++..||.++...|+|++|+..|++++.+.+..++.+++..+.++++||.+|...+++++|+.+|++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 87443 46789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 017388 303 SVCKS 307 (372)
Q Consensus 303 ~i~~~ 307 (372)
.+++.
T Consensus 181 ~~~~~ 185 (311)
T 3nf1_A 181 EIYQT 185 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98543
No 4
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.66 E-value=8.2e-15 Score=131.90 Aligned_cols=158 Identities=17% Similarity=0.076 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+|+.+..+.+|..+|..+.+|+.+|.+++.+
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 140 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQ---------------------- 140 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHc----------------------
Confidence 3467788999999999999999999999999999999999999999999999999844
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|+.+++.++.++.
T Consensus 141 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 141 --------------------------------------------------------------GKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 368889999999999998
Q ss_pred HhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh------------------------------------
Q 017388 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERM------------------------------------ 266 (372)
Q Consensus 224 k~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l------------------------------------ 266 (372)
+..+. .+..+.++.+||.++..+|+|++|+..|++++.+....
T Consensus 159 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T 3edt_B 159 TRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYG 238 (283)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC--------
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 87553 57789999999999999999999999999999986542
Q ss_pred -----cCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 267 -----VEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 267 -----~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
++..++..+.+++.||.+|...|++++|+.+|++|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 239 SWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 223678999999999999999999999999999999764
No 5
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.66 E-value=1.7e-14 Score=132.26 Aligned_cols=159 Identities=20% Similarity=0.190 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..+..+|..++..|+|++|+.+|.+++.+....+|..+|..+.+|+.+|.+++..
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------------------- 124 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR----------------------- 124 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHc-----------------------
Confidence 456688899999999999999999999999999999999999999999999999844
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|..+++.++.++.+
T Consensus 125 -------------------------------------------------------------g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 125 -------------------------------------------------------------GKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 3688899999999999887
Q ss_pred hcC-CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 225 HWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 225 ~~~-~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
..+ ..+..+.++..||.++...|+|++|+..|++++.+.+..++.+++..+.++++||.+|...|++++|+.+|++++.
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 744 3477899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 017388 304 VCKS 307 (372)
Q Consensus 304 i~~~ 307 (372)
+...
T Consensus 224 ~~~~ 227 (311)
T 3nf1_A 224 RAHE 227 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8655
No 6
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.65 E-value=2.4e-15 Score=152.25 Aligned_cols=135 Identities=20% Similarity=0.164 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..++..+++....|+|++|..+|.++|+++.+.+|+.||.++.+|.++|.+|..+
T Consensus 296 ~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~---------------------- 353 (433)
T 3qww_A 296 RYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM---------------------- 353 (433)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh----------------------
Confidence 4566777788888889999999999999999999999999999999999999999855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|..+++.++.|++
T Consensus 354 --------------------------------------------------------------g~~~eA~~~~~~aL~i~~ 371 (433)
T 3qww_A 354 --------------------------------------------------------------QDWEGALKYGQKIIKPYS 371 (433)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 378889999999999999
Q ss_pred HhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 224 k~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
+.++. ++.+|.+|++||.+|..+|+|++|+..|++||+|++..+|++||.++++..+|.
T Consensus 372 ~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 372 KHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 99884 799999999999999999999999999999999999999999999999988874
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.65 E-value=3.7e-15 Score=128.71 Aligned_cols=169 Identities=18% Similarity=0.173 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+.-++++|..++.+|+|++|+.+|.+|+++ +|..+.+|+.+|.+++.+++.+..+--. ..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~--~~---------- 64 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESL--KK---------- 64 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHH--HH----------
Confidence 567899999999999999999999999998 7999999999999999887654321100 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
... ..+... .... ..+......+++..|...+..+..+
T Consensus 65 --~~~--~~~~~~------~~~~----------------------------~~~~~~~~~~~~~~a~~~~~~a~~~---- 102 (184)
T 3vtx_A 65 --FVV--LDTTSA------EAYY----------------------------ILGSANFMIDEKQAAIDALQRAIAL---- 102 (184)
T ss_dssp --HHH--HCCCCH------HHHH----------------------------HHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred --HHh--cCchhH------HHHH----------------------------HHHHHHHHcCCHHHHHHHHHHHHHh----
Confidence 000 000000 0000 0000001123555665555555543
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.+....++..||.++...|+|++|+..|+++|.+. |..+.+|++||.+|...|++++|+.+|++||++-
T Consensus 103 ---~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 103 ---NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK--------PGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ---CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc--------chhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 34567899999999999999999999999999984 3446899999999999999999999999999875
Q ss_pred HH
Q 017388 306 KS 307 (372)
Q Consensus 306 ~~ 307 (372)
..
T Consensus 172 p~ 173 (184)
T 3vtx_A 172 EK 173 (184)
T ss_dssp HH
T ss_pred cc
Confidence 44
No 8
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.62 E-value=9.7e-15 Score=141.15 Aligned_cols=151 Identities=21% Similarity=0.298 Sum_probs=127.5
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccc
Q 017388 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDS 148 (372)
Q Consensus 69 L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~ 148 (372)
++-+|..++..|+|++|+.+|.+|+.+.... ...+..+.+|+.+|.+++.+
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~--------------------------- 156 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYM--------------------------- 156 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT---------------------------
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHc---------------------------
Confidence 3349999999999999999999999985443 34567999999999999965
Q ss_pred cccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC
Q 017388 149 VKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD 228 (372)
Q Consensus 149 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~ 228 (372)
+++..|...+..|+.++.+....
T Consensus 157 ---------------------------------------------------------~~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 157 ---------------------------------------------------------KQTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp ---------------------------------------------------------TCHHHHHHHHHHHHHHHHTCSTT
T ss_pred ---------------------------------------------------------CCHHHHHHHHHHHHHHHHhCccc
Confidence 26778888889999998887654
Q ss_pred CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 229 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 229 ~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
.+..+.++.+||.++...|+|++|+.+|++||.+.++. .+++.++.+|++||.+|...|++++|+.+|++|+.+.+.
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 67788899999999999999999999999999998877 467788889999999999999999999999999987544
No 9
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.60 E-value=9.5e-15 Score=147.49 Aligned_cols=139 Identities=8% Similarity=-0.006 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++..-..+..+|+|++|+.+|+++|+++.+.+|+.||.++.++.++|.+|..+
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~----------------------- 342 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL----------------------- 342 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh-----------------------
Confidence 456777777788899999999999999999999999999999999999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|..+++.++.||++
T Consensus 343 -------------------------------------------------------------g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 343 -------------------------------------------------------------GLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHHhHHH
Confidence 3788999999999999999
Q ss_pred hcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017388 225 HWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (372)
Q Consensus 225 ~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~ 287 (372)
.++. ++.+|..+++||.+|..+|+|++|+..|++||+|++..+|++||.++.++.+|+.++..
T Consensus 362 ~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 362 FFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 9874 79999999999999999999999999999999999999999999999999999998754
No 10
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.60 E-value=1.1e-13 Score=113.79 Aligned_cols=154 Identities=14% Similarity=0.146 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+++++.... + .....+.+++.+|.+++..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~---------------------- 62 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF-G-DKAAERIAYSNLGNAYIFL---------------------- 62 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-C-CchHHHHHHHHHHHHHHHc----------------------
Confidence 457889999999999999999999999999997663 2 2356778999999988854
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.|+.++.
T Consensus 63 --------------------------------------------------------------g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 63 --------------------------------------------------------------GEFETASEYYKKTLLLAR 80 (164)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 368889999999999987
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.. .....+.++.++|.++...|+|++|+..|++++.+.+... +++..+.++++||.+|...|++++|+.+|++++.
T Consensus 81 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 81 QLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhC-CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 763 3456789999999999999999999999999999988764 4677899999999999999999999999999999
Q ss_pred HHH
Q 017388 304 VCK 306 (372)
Q Consensus 304 i~~ 306 (372)
+.+
T Consensus 158 ~~~ 160 (164)
T 3ro3_A 158 ISR 160 (164)
T ss_dssp HHT
T ss_pred HHH
Confidence 864
No 11
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.60 E-value=1.7e-14 Score=139.74 Aligned_cols=155 Identities=17% Similarity=0.123 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
..--++.+|..++..|+|++|+.+|.+|+.+.... ...+..+.+|+++|.+++.+
T Consensus 100 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~----------------------- 154 (378)
T 3q15_A 100 KYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHM----------------------- 154 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC--CChHHHHHHHHHHHHHHHHc-----------------------
Confidence 34457789999999999999999999999986543 23488999999999999965
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
+++..|...++.|+.++.+
T Consensus 155 -------------------------------------------------------------~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 155 -------------------------------------------------------------KQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------CCcHHHHHHHHHHHHHHHh
Confidence 3678889999999999988
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
..+..+..+.++++||.++...|+|++|+..|++||.+.+++ .+.+.++.+|++||.+|...|++++|+.+|++|+.+
T Consensus 174 ~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 174 HPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 765556789999999999999999999999999999999876 355678999999999999999999999999999997
Q ss_pred HHH
Q 017388 305 CKS 307 (372)
Q Consensus 305 ~~~ 307 (372)
++.
T Consensus 252 ~~~ 254 (378)
T 3q15_A 252 SRE 254 (378)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 12
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.60 E-value=1.1e-13 Score=120.01 Aligned_cols=156 Identities=17% Similarity=0.053 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..+..+|..++..|+|++|+.+|.+|+++.... | ..+..+.+++.+|.+++..
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~----------------------- 79 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS-G-DHTAEHRALHQVGMVERMA----------------------- 79 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-C-CHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc-C-CcHHHHHHHHHHHHHHHHc-----------------------
Confidence 46788999999999999999999999999987543 2 4578899999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.|+.++.+
T Consensus 80 -------------------------------------------------------------g~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 80 -------------------------------------------------------------GNWDAARRCFLEERELLAS 98 (203)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 3688899999999999986
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
........+.++.+||.++...|+|++|+..|++++.+.+..- +.+..+.++++||.+|...|++++|+.+|++|+.+
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD--DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 6544447899999999999999999999999999999987653 45567899999999999999999999999999999
Q ss_pred HHHH
Q 017388 305 CKSR 308 (372)
Q Consensus 305 ~~~r 308 (372)
.+..
T Consensus 177 ~~~~ 180 (203)
T 3gw4_A 177 FAEL 180 (203)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 8763
No 13
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.59 E-value=1e-13 Score=133.96 Aligned_cols=156 Identities=13% Similarity=0.097 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++.+|+|++|+.+|.+|+++.... +...+..+.+|+++|.++..+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~---------------------- 197 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDL---------------------- 197 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHh----------------------
Confidence 467889999999999999999999999999997654 555788999999999999855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|.+.++.|+.++.
T Consensus 198 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 198 --------------------------------------------------------------KQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 368889999999999998
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+. +.....+.++.+||.++..+|+|++|+.+|++||.+.+... +.+..+.++++||.+|...|++++|+.+|++|+.
T Consensus 216 ~~-~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 216 AE-KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN--ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred Hc-CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc--cchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 77 34567899999999999999999999999999999988764 2267799999999999999999999999999999
Q ss_pred HHHH
Q 017388 304 VCKS 307 (372)
Q Consensus 304 i~~~ 307 (372)
+.+.
T Consensus 293 ~~~~ 296 (383)
T 3ulq_A 293 YSQK 296 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9754
No 14
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.56 E-value=7.3e-14 Score=149.61 Aligned_cols=172 Identities=17% Similarity=0.200 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccC--CCCccCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVS--VPKKEGDSQQ 141 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~--~~~~~~e~~~ 141 (372)
..+..|.++|..++.+|+|++|+.+|++|+++ .|..+.+|+++|.+|+.+++.+.++--. +.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~------- 71 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR------- 71 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------
Confidence 35788999999999999999999999999999 7999999999999999998765431110 000
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
.++.... . - -..+......++++.|.+.|+.|+.+
T Consensus 72 -----------l~P~~~~---------a--------~-----------------~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 72 -----------ISPTFAD---------A--------Y-----------------SNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp -----------HCTTCHH---------H--------H-----------------HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -----------hCCCCHH---------H--------H-----------------HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 0000000 0 0 00000111234566666666655544
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
.+..+.+|.+||.++..+|+|++|+..|++||++.. ..+.+|++||.+|...+++++|+++|+++
T Consensus 107 -------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P--------~~~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 107 -------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP--------DFPDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--------CCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CChHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 467799999999999999999999999999999843 34689999999999999999999999999
Q ss_pred HHHHHHHHH
Q 017388 302 ISVCKSRVQ 310 (372)
Q Consensus 302 l~i~~~rl~ 310 (372)
+++....+.
T Consensus 172 l~l~~~~~~ 180 (723)
T 4gyw_A 172 VSIVADQLE 180 (723)
T ss_dssp HHHHHHHHH
T ss_pred HHhChhHHh
Confidence 999877654
No 15
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.55 E-value=1.9e-14 Score=145.60 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=102.7
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 204 DESDLDLAWKMLDVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 204 d~~dl~~Awe~Le~Ar~I~ek~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
..++++.|..+++.++.|+++.++. ++.++.++++||.+|..+|+|++|+.+|+++|.|+++.+|++||.+|.+|+|||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4568899999999999999999885 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCchHHHHHHHHHHHHHHHHHHHH
Q 017388 283 LCLEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (372)
Q Consensus 283 ~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l 312 (372)
.+|..+|+|++|+.+|++|++|++..++.-
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999988875543
No 16
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.55 E-value=1.5e-13 Score=128.74 Aligned_cols=100 Identities=18% Similarity=0.085 Sum_probs=90.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|..+++.|+.++.+.....+..+.+|.+||.++..+|+|++|+.+|++||.+.+..- +...++.+|+++|.+|
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN--SMALIGQLYYQRGECL 246 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--BCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHH
Confidence 57899999999999999887566678899999999999999999999999999999998763 5667899999999999
Q ss_pred HhCCC-chHHHHHHHHHHHHHHH
Q 017388 286 EIGSK-PQEAIPYCQKAISVCKS 307 (372)
Q Consensus 286 ~~~~~-~~eAi~~~ekAl~i~~~ 307 (372)
...|+ +++|+.+|++|+.+++.
T Consensus 247 ~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 247 RKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHHHH
Confidence 99995 69999999999999874
No 17
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.55 E-value=2.9e-13 Score=127.38 Aligned_cols=151 Identities=16% Similarity=0.074 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..+...|..+...|+|++|+.+|.+|+++..+. | ..+..+.+|+++|.++..+
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~------------------------ 90 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSG------------------------ 90 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHC------------------------
Confidence 3344455778889999999999999999997653 4 3467799999999999855
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|..+|+.|+.|+.+.
T Consensus 91 ------------------------------------------------------------g~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 91 ------------------------------------------------------------GNSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHHHHHc
Confidence 36788999999999999765
Q ss_pred cCCCccHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~-~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
+.....+.+|.+||.++... |+|++|+.+|++||.+.+..- +.+..+.+|++||.+|...|+|++|+.+|++++.+
T Consensus 111 -g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 111 -GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33355789999999999996 999999999999999988642 33456889999999999999999999999999986
Q ss_pred H
Q 017388 305 C 305 (372)
Q Consensus 305 ~ 305 (372)
.
T Consensus 188 ~ 188 (292)
T 1qqe_A 188 S 188 (292)
T ss_dssp T
T ss_pred H
Confidence 4
No 18
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.54 E-value=2.8e-13 Score=126.94 Aligned_cols=195 Identities=15% Similarity=0.061 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQ 140 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~ 140 (372)
......++.++..++..|+|++|+.+|.+++++.... ...+..+..++.+|..+...++.+.+.-- .+.......
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~- 148 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH--PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG- 148 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC--hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-
Confidence 4577888999999999999999999999999864331 11245677788888888888665432110 000000000
Q ss_pred CCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 017388 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 220 (372)
Q Consensus 141 ~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~ 220 (372)
.+.. ..... . -..+...-..++++.|+.+++.|+.
T Consensus 149 ----~~~~----------------~~~~~---~----------------------~~lg~~y~~~~~~~~A~~~~~kal~ 183 (293)
T 2qfc_A 149 ----IDVY----------------QNLYI---E----------------------NAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp ----SCTT----------------HHHHH---H----------------------HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ----CchH----------------HHHHH---H----------------------HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 0000 00000 0 0000111234689999999999999
Q ss_pred HHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH-HHHHH
Q 017388 221 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA-IPYCQ 299 (372)
Q Consensus 221 I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA-i~~~e 299 (372)
++..........+.+|.++|.++..+|+|++|+..|++||.+.... .++..++.+|+++|.+|...|++++| ..+|+
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~ 261 (293)
T 2qfc_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 9988755432344899999999999999999999999999998653 35667899999999999999999999 88899
Q ss_pred HHHHHHHH
Q 017388 300 KAISVCKS 307 (372)
Q Consensus 300 kAl~i~~~ 307 (372)
+|+.+++.
T Consensus 262 ~Al~~~~~ 269 (293)
T 2qfc_A 262 KASFFFDI 269 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998643
No 19
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.53 E-value=6e-13 Score=128.72 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~ 142 (372)
...+..+..+|..++.+|+|+.|+.+|.+|+++.... +...+..+.+++.+|.++..+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~--------------------- 195 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDF--------------------- 195 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHh---------------------
Confidence 4568889999999999999999999999999997653 334567899999999999855
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
++++.|.+.++.|+.++
T Consensus 196 ---------------------------------------------------------------~~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 196 ---------------------------------------------------------------KHYDKALPHLEAALELA 212 (378)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 36888999999999999
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
.+. +.....+.++.+||.++..+|+|++|+.+|++|+.+.+.. .++..+.++++||.+|...|++++|+.+|++|+
T Consensus 213 ~~~-~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 288 (378)
T 3q15_A 213 MDI-QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGL 288 (378)
T ss_dssp HHT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHc-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 776 3345789999999999999999999999999999999887 455669999999999999999999999999999
Q ss_pred HHH
Q 017388 303 SVC 305 (372)
Q Consensus 303 ~i~ 305 (372)
.+.
T Consensus 289 ~~~ 291 (378)
T 3q15_A 289 DHI 291 (378)
T ss_dssp HHC
T ss_pred HHH
Confidence 984
No 20
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.52 E-value=4.8e-13 Score=126.73 Aligned_cols=57 Identities=12% Similarity=0.118 Sum_probs=45.0
Q ss_pred HHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhh
Q 017388 66 ADEL-MEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (372)
Q Consensus 66 a~~L-~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~ 124 (372)
|..+ ...|..+...|+|++|+.+|.+|+++..+. |. .+..+.+|..+|.++..+++.
T Consensus 35 A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~~-~~~~a~~~~~lg~~~~~~g~~ 92 (307)
T 2ifu_A 35 AASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN-RS-LFHAAKAFEQAGMMLKDLQRM 92 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CC-HHHHHHHHHHHHHHHHhCCCH
Confidence 4444 445788999999999999999999997654 43 457889999999999877543
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.51 E-value=6.6e-14 Score=143.78 Aligned_cols=110 Identities=12% Similarity=-0.000 Sum_probs=104.1
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 204 DESDLDLAWKMLDVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 204 d~~dl~~Awe~Le~Ar~I~ek~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
..++++.|..+++.++.|+++.++. ++.++.++++||.+|..+|+|++|+.+|+++|.|+++.+|++||.+|.+|++||
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 5788999999999999999999885 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCchHHHHHHHHHHHHHHHHHHHHH
Q 017388 283 LCLEIGSKPQEAIPYCQKAISVCKSRVQRLL 313 (372)
Q Consensus 283 ~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~ 313 (372)
.+|..+|+|++|+.+|++|++|++..++.-.
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H 431 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSH 431 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999988766543
No 22
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=9.1e-13 Score=117.91 Aligned_cols=142 Identities=20% Similarity=0.264 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHH----------------HHHHHHHhhhhhcCcc
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQ----------------YGRALLYKAQEEADPL 129 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~----------------yG~ALl~~ar~es~vL 129 (372)
+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|++ +|.+++..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~-------- 67 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKN-------- 67 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC--------
Confidence 568899999999999999999999999998 7999999999 77777644
Q ss_pred cCCCCccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHH
Q 017388 130 VSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLD 209 (372)
Q Consensus 130 g~~~~~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~ 209 (372)
++++
T Consensus 68 ----------------------------------------------------------------------------g~~~ 71 (208)
T 3urz_A 68 ----------------------------------------------------------------------------RNYD 71 (208)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------CCHH
Confidence 2566
Q ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC--------------------
Q 017388 210 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEP-------------------- 269 (372)
Q Consensus 210 ~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~-------------------- 269 (372)
.|...|+.|+.+ .|.-+.+|.+||.++...|+|++|+.+|+++|.+.+.....
T Consensus 72 ~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~ 144 (208)
T 3urz_A 72 KAYLFYKELLQK-------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLE 144 (208)
T ss_dssp HHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHH
Confidence 666666666554 34567888888888888888888888888888874321100
Q ss_pred -------CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 270 -------DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 270 -------~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
.......++|++|+++...++|++|+.+|++||.+..
T Consensus 145 ~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 145 TDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 0000112345566666667778888888888887643
No 23
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.47 E-value=7.7e-13 Score=124.45 Aligned_cols=156 Identities=12% Similarity=0.045 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..+.++|..+..+|+|++|+.+|.+|+++.... |. ....+.+|+++|.++...
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g~-~~~~a~~~~~lg~~~~~~----------------------- 130 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-GQ-FRRGANFKFELGEILEND----------------------- 130 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-CC-HHHHHHHHHHHHHHHHHh-----------------------
Confidence 36788999999999999999999999999997543 32 345678899999888742
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
.++++.|..+|+.|+.++..
T Consensus 131 ------------------------------------------------------------lg~~~~A~~~~~~Al~~~~~ 150 (292)
T 1qqe_A 131 ------------------------------------------------------------LHDYAKAIDCYELAGEWYAQ 150 (292)
T ss_dssp ------------------------------------------------------------TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------hcCHHHHHHHHHHHHHHHHh
Confidence 03688899999999999876
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
.. .....+.+|.+||.++..+|+|++|+..|++++.+..... ..+...+.+|+++|.||...|++++|+.+|++++.+
T Consensus 151 ~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 151 DQ-SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR-LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT-TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred CC-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC-cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 43 2234578999999999999999999999999998864321 112356779999999999999999999999999976
Q ss_pred HHH
Q 017388 305 CKS 307 (372)
Q Consensus 305 ~~~ 307 (372)
...
T Consensus 229 ~p~ 231 (292)
T 1qqe_A 229 DPN 231 (292)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 24
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.47 E-value=9.8e-13 Score=140.89 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..+.++|..++.+|+|++|+.+|++|+++ .|..+.+|+++|.+|+.+++.+.++--. +.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~a~~nLg~~l~~~g~~~~A~~~~--~k---------- 102 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTLKEMQDVQGALQCY--TR---------- 102 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHH--HH----------
Confidence 567889999999999999999999999998 7999999999999999998765432110 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
.+. .++.... . - -..+......++++.|...|+.|+.+
T Consensus 103 --Al~--l~P~~~~---------a--------~-----------------~~Lg~~~~~~g~~~eAi~~~~~Al~l---- 140 (723)
T 4gyw_A 103 --AIQ--INPAFAD---------A--------H-----------------SNLASIHKDSGNIPEAIASYRTALKL---- 140 (723)
T ss_dssp --HHH--HCTTCHH---------H--------H-----------------HHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred --HHH--hCCCCHH---------H--------H-----------------HHHHHHHHHcCCHHHHHHHHHHHHHh----
Confidence 000 0000000 0 0 00001112234566666666665544
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMV 267 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~ 267 (372)
.+..+.+|.+||.++...++|++|+..|++++++....+
T Consensus 141 ---~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ---KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ---CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ---CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 467899999999999999999999999999999987653
No 25
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.47 E-value=2.4e-12 Score=123.86 Aligned_cols=193 Identities=15% Similarity=0.108 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccC--CCCccCCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVS--VPKKEGDS 139 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~--~~~~~~e~ 139 (372)
....+..|+.+|..++..|+|++|+.+|.+|+++... ..+..+.+|+.+|.+++..++.+...--. +.......
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE----DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS----CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc----ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 3466889999999999999999999999999998543 46788899999999999998764431100 00000000
Q ss_pred CCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 017388 140 QQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 219 (372)
Q Consensus 140 ~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar 219 (372)
. +.+ ..... . -..+...-..++++.|..+++.|+
T Consensus 120 ---~--~~~----------------~~~~~---~----------------------~~l~~~~~~~g~~~~A~~~~~~al 153 (411)
T 4a1s_A 120 ---N--DRL----------------GEAKS---S----------------------GNLGNTLKVMGRFDEAAICCERHL 153 (411)
T ss_dssp ---T--CHH----------------HHHHH---H----------------------HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---c--Cch----------------HHHHH---H----------------------HHHHHHHHHCCCHHHHHHHHHHHH
Confidence 0 000 00000 0 000001123468999999999999
Q ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhcCC-----------------HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 220 AIAEKHWGDSMEKVDILSALAEVALERED-----------------IETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 220 ~I~ek~~~~~~~~A~~~~~LGev~~e~~~-----------------y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
.++.+.. ..+..+.+|.+||.++...|+ |++|+..|++++.+.+.+ .+++.++.+|++||
T Consensus 154 ~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la 230 (411)
T 4a1s_A 154 TLARQLG-DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLG 230 (411)
T ss_dssp HHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHhh-chHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Confidence 9988763 346789999999999999999 999999999999999887 35688999999999
Q ss_pred HHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 283 LCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 283 ~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
.+|...|++++|+.+|++++.+...
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 231 NTYYLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998765
No 26
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.47 E-value=7.6e-13 Score=119.17 Aligned_cols=133 Identities=18% Similarity=0.127 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+|+.+ .|..+.+|+++|.+++..
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~------------------------ 52 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKL------------------------ 52 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc------------------------
Confidence 346789999999999999999999999987 799999999999999855
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|...|+.|..+
T Consensus 53 ------------------------------------------------------------g~~~~A~~~~~~al~~---- 68 (217)
T 2pl2_A 53 ------------------------------------------------------------GLVNPALENGKTLVAR---- 68 (217)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHh----
Confidence 2566677777766654
Q ss_pred cCCCccHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH
Q 017388 226 WGDSMEKVDILSALAEVALER-----------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~-----------~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
.|..+.+|.+||.++... |+|++|+..|++++.+.+ .-+.+|++||.+|...|++++|
T Consensus 69 ---~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P--------~~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 69 ---TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP--------RYAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHcCChHHH
Confidence 356789999999999999 999999999999999843 3468999999999999999999
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
+.+|++|+.+-
T Consensus 138 ~~~~~~al~~~ 148 (217)
T 2pl2_A 138 EASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcc
Confidence 99999999864
No 27
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.47 E-value=2.3e-12 Score=123.99 Aligned_cols=99 Identities=11% Similarity=0.129 Sum_probs=88.5
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a 284 (372)
.++++.|..+++.|+.++.+. +..+..+.+|..||.++...|+|++|+..|++++.+.+... +++..+.+|++||.+
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~ 175 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSM-NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNV 175 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHc-cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHH
Confidence 368999999999999998776 34577899999999999999999999999999999998873 678899999999999
Q ss_pred HHhCCC-----------------chHHHHHHHHHHHHHH
Q 017388 285 LEIGSK-----------------PQEAIPYCQKAISVCK 306 (372)
Q Consensus 285 ~~~~~~-----------------~~eAi~~~ekAl~i~~ 306 (372)
|...|+ +++|+.+|++++.+.+
T Consensus 176 ~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 214 (411)
T 4a1s_A 176 YHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMR 214 (411)
T ss_dssp HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999888764
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.45 E-value=2.3e-12 Score=116.05 Aligned_cols=144 Identities=14% Similarity=0.079 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+|+++ .|..+.+|+.+|.+++...+....
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~------------------ 92 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVAR--------TPRYLGGYMVLSEAYVALYRQAED------------------ 92 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHTCSS------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhhhhhhh------------------
Confidence 456889999999999999999999999998 699999999999999977421000
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
. .-..++++.|...|+.|+.+
T Consensus 93 --------------------~-----------------------------------~~~~g~~~~A~~~~~~al~~---- 113 (217)
T 2pl2_A 93 --------------------R-----------------------------------ERGKGYLEQALSVLKDAERV---- 113 (217)
T ss_dssp --------------------H-----------------------------------HHHHHHHHHHHHHHHHHHHH----
T ss_pred --------------------h-----------------------------------cccccCHHHHHHHHHHHHHh----
Confidence 0 00014677777777766654
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.|..+.+|.+||.++...|+|++|+..|+++|.+. . -+.+|++||.+|...|++++|+.+|++++.+.
T Consensus 114 ---~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~--------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 181 (217)
T 2pl2_A 114 ---NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-D--------TPEIRSALAELYLSMGRLDEALAQYAKALEQA 181 (217)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C--------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ---CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c--------chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999999986 2 25889999999999999999999999999874
Q ss_pred H
Q 017388 306 K 306 (372)
Q Consensus 306 ~ 306 (372)
.
T Consensus 182 P 182 (217)
T 2pl2_A 182 P 182 (217)
T ss_dssp T
T ss_pred C
Confidence 3
No 29
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.45 E-value=3.7e-12 Score=121.00 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=89.5
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILE 264 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~--------------------y~~Al~~y~~AL~I~~ 264 (372)
.++++.|..+++.|+.++.+... ....+.++..||.++...|+ |++|+..|++++.+.+
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 178 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISRELND-KVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT 178 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35889999999999999887643 45679999999999999999 9999999999999998
Q ss_pred HhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 265 RMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 265 ~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
.. .+++..+.++++||.+|...|++++|+.+|++++.+...
T Consensus 179 ~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 179 AL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH
T ss_pred hc--cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Confidence 87 367889999999999999999999999999999998654
No 30
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.45 E-value=2.2e-12 Score=122.19 Aligned_cols=150 Identities=13% Similarity=0.104 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..+.++|..+..+|+|++|+.+|.+|+++... .|. ....+.+|+++|.++..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~-~~~~a~~~~~lg~~~~~------------------------ 128 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE-NGT-PDTAAMALDRAGKLMEP------------------------ 128 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT-TTC-HHHHHHHHHHHHHHHTT------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCC-HHHHHHHHHHHHHHHHc------------------------
Confidence 4667889999999999999999999999999753 332 23567888888877651
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|.++|+.|+.++..
T Consensus 129 -------------------------------------------------------------g~~~~A~~~~~~Al~~~~~ 147 (307)
T 2ifu_A 129 -------------------------------------------------------------LDLSKAVHLYQQAAAVFEN 147 (307)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHHHh
Confidence 2688899999999999987
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
. +.....+.+|.+||.++..+|+|++|+.+|+++|.+.+.... .+..+.+++++|.+|...|++++|+.+|++++ +
T Consensus 148 ~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~ 223 (307)
T 2ifu_A 148 E-ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN--YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-S 223 (307)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-T
T ss_pred C-CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC--hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-C
Confidence 4 233457899999999999999999999999999999987642 55678899999999999999999999999998 5
Q ss_pred H
Q 017388 305 C 305 (372)
Q Consensus 305 ~ 305 (372)
.
T Consensus 224 ~ 224 (307)
T 2ifu_A 224 I 224 (307)
T ss_dssp S
T ss_pred C
Confidence 4
No 31
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.44 E-value=2.4e-13 Score=137.18 Aligned_cols=108 Identities=7% Similarity=0.010 Sum_probs=98.3
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~ 283 (372)
.+.++.|.++++.++.|+++.++. ++.++.++.+||.+|..+|+|++|+.+|+++|.|+++.+|++||.+|.++++||.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 456777888888888888777764 6899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCchHHHHHHHHHHHHHHHHHHHH
Q 017388 284 CLEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (372)
Q Consensus 284 a~~~~~~~~eAi~~~ekAl~i~~~rl~~l 312 (372)
+|..+|+|++|+.+|++|++|++..++.-
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999988875543
No 32
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.44 E-value=4.3e-12 Score=113.26 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~p-e~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
..++.+|..++..|+|++|+.+|.+++++ .| ....+++++|.+++.+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~------------------------ 55 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL--------TNNQDSVTAYNCGVCADNI------------------------ 55 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTTCCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc--------cCCCCcHHHHHHHHHHHHh------------------------
Confidence 67899999999999999999999999998 34 5567888899999855
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|...++.|+.
T Consensus 56 ------------------------------------------------------------~~~~~A~~~~~~al~----- 70 (228)
T 4i17_A 56 ------------------------------------------------------------KKYKEAADYFDIAIK----- 70 (228)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHH-----
T ss_pred ------------------------------------------------------------hcHHHHHHHHHHHHH-----
Confidence 256667776666663
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
..+..+.+|..||.++..+|+|++|+..|++++.+.+... .-...++.+|+++|.+|...|++++|+.+|++|+.+-
T Consensus 71 --~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 71 --KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA-TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp --TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred --hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 3466899999999999999999999999999998854211 0123567899999999999999999999999999865
Q ss_pred HH
Q 017388 306 KS 307 (372)
Q Consensus 306 ~~ 307 (372)
..
T Consensus 148 p~ 149 (228)
T 4i17_A 148 SK 149 (228)
T ss_dssp CH
T ss_pred CC
Confidence 44
No 33
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.43 E-value=1e-11 Score=117.97 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
..++.|..+++.|+.++.+. +..+..+.++.+||.++...|+|++|+..|++++.+.+.. .+++.++.+|++||.+|
T Consensus 161 ~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~ 237 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVTAL-GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAY 237 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHH
Confidence 46888888888888888776 3346788899999999999999999999999999998875 35667888999999999
Q ss_pred HhCCCchHHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
...|++++|+.+|++++.+...
T Consensus 238 ~~~g~~~~A~~~~~~al~~~~~ 259 (406)
T 3sf4_A 238 IFLGEFETASEYYKKTLLLARQ 259 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999887654
No 34
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.42 E-value=8.6e-12 Score=114.07 Aligned_cols=151 Identities=18% Similarity=0.175 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..|+..|..++..|+|++|+.+|.+++++ .....+..+.+|+.+|.+++..
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~----~~~~~~~~~~~~~~l~~~~~~~------------------------ 56 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV----GTEDLKTLSAIYSQLGNAYFYL------------------------ 56 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCSCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh----CcccHHHHHHHHHHHHHHHHHc------------------------
Confidence 567889999999999999999999999997 2223334578999999998854
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
+++..|..+++.|+.++.+.
T Consensus 57 ------------------------------------------------------------g~~~~A~~~~~~al~~~~~~ 76 (338)
T 3ro2_A 57 ------------------------------------------------------------HDYAKALEYHHHDLTLARTI 76 (338)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHHhhcc
Confidence 36788889999999888776
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC---------------
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK--------------- 290 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~--------------- 290 (372)
. ..+..+.+|..||.++...|+|++|+..|++++.+.+... +++.++.++++||.+|...++
T Consensus 77 ~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T 3ro2_A 77 G-DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPE 153 (338)
T ss_dssp T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCH
T ss_pred c-ccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhh
Confidence 3 3467899999999999999999999999999999998863 567789999999999999999
Q ss_pred -----chHHHHHHHHHHHHHHH
Q 017388 291 -----PQEAIPYCQKAISVCKS 307 (372)
Q Consensus 291 -----~~eAi~~~ekAl~i~~~ 307 (372)
+++|+.+|++++.+.+.
T Consensus 154 ~a~~~~~~A~~~~~~a~~~~~~ 175 (338)
T 3ro2_A 154 DVRNALQAAVDLYEENLSLVTA 175 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999998887543
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.42 E-value=1.1e-12 Score=117.22 Aligned_cols=125 Identities=14% Similarity=0.048 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCc
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d 146 (372)
..++.+|..++..|+|++|+.+|.+|+.+ .|....+|+.+|.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~------------------------- 89 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKK--------NYNLANAYIGKSAAYRDM------------------------- 89 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TCSHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHc-------------------------
Confidence 45667999999999999999999999976 689999999999999855
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 017388 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (372)
Q Consensus 147 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~ 226 (372)
++++.|...|+.+..++-...
T Consensus 90 -----------------------------------------------------------~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 90 -----------------------------------------------------------KNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHSTTCH
T ss_pred -----------------------------------------------------------ccHHHHHHHHHHHHHHCCCcH
Confidence 257778888888877653322
Q ss_pred CCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh--HHHHHHHHHHHHHhCCCc
Q 017388 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH--IAELNFRICLCLEIGSKP 291 (372)
Q Consensus 227 ~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~--iAe~~~~Lg~a~~~~~~~ 291 (372)
.....++.+|..+|.++...|+|++|+..|+++|.+ +|. .+.+|++||.+|...++.
T Consensus 111 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 111 TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--------TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--------CCCcccHHHHHHHHHHHHHHHHH
Confidence 112346799999999999999999999999999987 345 578999999999888876
No 36
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.41 E-value=1.4e-11 Score=112.76 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+.-+..+|..++..|+|++|+.+|.+++.+.... ...+..+.+|+.+|.+++..
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~---------------------- 96 (338)
T 3ro2_A 41 TLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVL---------------------- 96 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHc----------------------
Confidence 346778899999999999999999999999997665 34678899999999998855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.++.++.
T Consensus 97 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 97 --------------------------------------------------------------GNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 367888899999999888
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~--------------------y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~ 283 (372)
+.. .....+.++..||.++...|+ |++|+..|++++.+.+... +.+..+.+++++|.
T Consensus 115 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~ 191 (338)
T 3ro2_A 115 ELN-DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALG--DRAAQGRAFGNLGN 191 (338)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHH
T ss_pred Hhc-CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHH
Confidence 763 345678999999999999999 9999999999999988863 56788999999999
Q ss_pred HHHhCCCchHHHHHHHHHHHHHHH
Q 017388 284 CLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 284 a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
+|...|++++|+.+|++++.+...
T Consensus 192 ~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 192 THYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988654
No 37
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.7e-11 Score=109.04 Aligned_cols=149 Identities=18% Similarity=0.117 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+++.+. ..+.+|+.+|.+++.+
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~~~~~~~~---------------------- 51 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH---------KDITYLNNRAAAEYEK---------------------- 51 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------CCTHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHHc----------------------
Confidence 457899999999999999999999999999983 3367899999998855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.+..+..
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~a~~~~~ 69 (258)
T 3uq3_A 52 --------------------------------------------------------------GEYETAISTLNDAVEQGR 69 (258)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhCc
Confidence 367888889999988876
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------------HHhcCCCChhHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL-------------------ERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~-------------------~~l~~~~~r~iAe~~~~Lg~a 284 (372)
......+..+.+|..||.++...|+|++|+..|++++.+. .+.+ ..+|..+.+|+.+|.+
T Consensus 70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (258)
T 3uq3_A 70 EMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEA-YVNPEKAEEARLEGKE 148 (258)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHH-HcCcchHHHHHHHHHH
Confidence 6543344568999999999999999999999999999952 1111 1456778999999999
Q ss_pred HHhCCCchHHHHHHHHHHHHHH
Q 017388 285 LEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
|...|++++|+.+|++++.+..
T Consensus 149 ~~~~~~~~~A~~~~~~a~~~~~ 170 (258)
T 3uq3_A 149 YFTKSDWPNAVKAYTEMIKRAP 170 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHhcCHHHHHHHHHHHHhcCc
Confidence 9999999999999999987643
No 38
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.39 E-value=2.7e-12 Score=112.71 Aligned_cols=143 Identities=15% Similarity=0.073 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~ 141 (372)
++..+..++.+|..++..|+|++|+.+|.+++. | .+.+|+.+|.+++.+
T Consensus 2 s~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~----------~-~~~~~~~lg~~~~~~-------------------- 50 (213)
T 1hh8_A 2 SLVEAISLWNEGVLAADKKDWKGALDAFSAVQD----------P-HSRICFNIGCMYTIL-------------------- 50 (213)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS----------C-CHHHHHHHHHHHHHT--------------------
T ss_pred ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC----------C-ChHHHHHHHHHHHHc--------------------
Confidence 456788899999999999999999999999841 1 467999999999855
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
++++.|...++.|+.+
T Consensus 51 ----------------------------------------------------------------g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 51 ----------------------------------------------------------------KNMTEAEKAFTRSINR 66 (213)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHHHHHh
Confidence 2677788888877765
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC--------CCChhHHHHHHHHHHHHHhCCCchH
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVE--------PDSRHIAELNFRICLCLEIGSKPQE 293 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~--------~~~r~iAe~~~~Lg~a~~~~~~~~e 293 (372)
. +..+.+|.++|.++...|+|++|+.+|++++.+...... ..++..+.+|++||.+|...|++++
T Consensus 67 ~-------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 67 D-------KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp C-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred C-------ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 2 446889999999999999999999999999987543210 1335677999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 294 AIPYCQKAISVCK 306 (372)
Q Consensus 294 Ai~~~ekAl~i~~ 306 (372)
|+.+|++++.+..
T Consensus 140 A~~~~~~al~~~p 152 (213)
T 1hh8_A 140 AEEQLALATSMKS 152 (213)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCc
Confidence 9999999998754
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.39 E-value=7.7e-12 Score=103.83 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~ 142 (372)
.+.|..+.++|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+++.+
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~--------------------- 55 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEE--------------------- 55 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHh---------------------
Confidence 356778889999999999999999999999998 799999999999999966
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
++++.|.+.++.|+.+.
T Consensus 56 ---------------------------------------------------------------~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 56 ---------------------------------------------------------------KKFAECVQFCEKAVEVG 72 (127)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------hhHHHHHHHHHHHHHhC
Confidence 36888899999999988
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
.........++.+|.+||.++...++|++|+..|+++|.+.
T Consensus 73 ~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 73 RETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 77666566789999999999999999999999999999863
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.39 E-value=5.3e-12 Score=105.00 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.|..+.++|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+++.+
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~----------------------- 60 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKL----------------------- 60 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhh-----------------------
Confidence 3778899999999999999999999999998 699999999999999966
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.|+.+
T Consensus 61 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 76 (126)
T 4gco_A 61 -------------------------------------------------------------MEFQRALDDCDTCIRL--- 76 (126)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHHh---
Confidence 2566777777777755
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
.+..+.+|.+||.++..+|+|++|+.+|+++|++.+ ++ ..++.+|+.|+
T Consensus 77 ----~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P-----~~---~~a~~~l~~~l 125 (126)
T 4gco_A 77 ----DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDP-----SN---EEAREGVRNCL 125 (126)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHC
T ss_pred ----hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCc-----CC---HHHHHHHHHhc
Confidence 345688999999999999999999999999999843 23 47888888775
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.39 E-value=8.2e-12 Score=103.67 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+|+.|.+.|+.|+.+ .|..+.+|.+||.+++.+|+|++|+.+|++||.|.+... ..++.++.+|++||.+|.
T Consensus 23 ~~~~A~~~y~~Al~~-------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~a~~~~~lg~~~~ 94 (127)
T 4gcn_A 23 DFEKAHVHYDKAIEL-------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR-ADYKLIAKAMSRAGNAFQ 94 (127)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc-hhhHHHHHHHHHHHHHHH
Confidence 688888888888765 345688999999999999999999999999999988754 467789999999999999
Q ss_pred hCCCchHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i 304 (372)
..++|++|+.+|++||.+
T Consensus 95 ~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 95 KQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhh
Confidence 999999999999999875
No 42
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.39 E-value=4.8e-13 Score=114.20 Aligned_cols=129 Identities=11% Similarity=0.091 Sum_probs=107.6
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccc
Q 017388 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (372)
Q Consensus 71 ~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~ 150 (372)
.+|..+...|++++|+..|++++.. .|+....+|.+|++++..
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~----------------------------- 44 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEA----------------------------- 44 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHT-----------------------------
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHc-----------------------------
Confidence 4788889999999999999999986 599999999999999955
Q ss_pred cccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCc
Q 017388 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSM 230 (372)
Q Consensus 151 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~ 230 (372)
++++.|.+.|+.|+.+ .+
T Consensus 45 -------------------------------------------------------~~~~~A~~~~~~al~~-------~p 62 (150)
T 4ga2_A 45 -------------------------------------------------------KEYDLAKKYICTYINV-------QE 62 (150)
T ss_dssp -------------------------------------------------------TCHHHHHHHHHHHHHH-------CT
T ss_pred -------------------------------------------------------CCHHHHHHHHHHHHHh-------CC
Confidence 2677788777777765 35
Q ss_pred cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHH-HHHHHHHH
Q 017388 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC-QKAISVCK 306 (372)
Q Consensus 231 ~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~-ekAl~i~~ 306 (372)
.-+.+|.+||.++...|+|++|+.+|++||.+.+ .-+.+|++||.+|...+++++|+.+| ++|+.+..
T Consensus 63 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 63 RDPKAHRFLGLLYELEENTDKAVECYRRSVELNP--------TQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 6789999999999999999999999999999853 33589999999999999999888765 89998753
No 43
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.37 E-value=9.5e-12 Score=117.37 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=80.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC---CChhHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEP---DSRHIAELNFRIC 282 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~---~~r~iAe~~~~Lg 282 (372)
++++.|...++.++.+ .+..+.+|.+||.++...|+|++|+..|++++.+.+...++ .++..+.+|++||
T Consensus 265 g~~~~A~~~~~~al~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (368)
T 1fch_A 265 NQSEEAVAAYRRALEL-------QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLR 337 (368)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHH
Confidence 3567777777777654 24567899999999999999999999999999999877433 3566789999999
Q ss_pred HHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 283 LCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 283 ~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
.+|...|++++|...+++++.+++..+
T Consensus 338 ~~~~~~g~~~~A~~~~~~~l~~~~~~~ 364 (368)
T 1fch_A 338 LALSMLGQSDAYGAADARDLSTLLTMF 364 (368)
T ss_dssp HHHHHHTCGGGHHHHHTTCHHHHHHHT
T ss_pred HHHHHhCChHhHHHhHHHHHHHHHHhc
Confidence 999999999999999999999987653
No 44
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.37 E-value=2.6e-11 Score=113.49 Aligned_cols=100 Identities=16% Similarity=0.189 Sum_probs=86.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|+.+++.|+.+..+.. .....+.+|.+||.++...|+|++|+.+|++||.+.+.+ +.+++.++.+|++||.+|
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~-~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y 206 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGI-DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCS-CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHH
Confidence 378889999999988654332 234578899999999999999999999999999998876 347788999999999999
Q ss_pred HhCCCchHHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
...++|++|+.+|++|+.+.+.
T Consensus 207 ~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 207 YLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765
No 45
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.36 E-value=1e-11 Score=116.23 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=82.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLC 284 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~-iAe~~~~Lg~a 284 (372)
++++.|...++.|+.++.+.. .....+.+|++||.++...|+|++|+..|++||.+.+... +.+. .+.+|++||.+
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~--~~~~~~~~~~~nlg~~ 205 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGI-DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNEEFDVKVRYNHAKA 205 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSS-CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC--ccccchHHHHHhHHHH
Confidence 578888888888877655432 2345789999999999999999999999999999988654 3333 34899999999
Q ss_pred HHhCCCchHHHHHHHHHHHHHHH
Q 017388 285 LEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
|...|+|++|+.+|++|+.+...
T Consensus 206 y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 206 LYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999753
No 46
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3.1e-11 Score=107.33 Aligned_cols=166 Identities=15% Similarity=0.066 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++++... .+...+..+.+|+.+|.+++.+++.+.++--. ..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~--~~---------- 104 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE-MRADYKVISKSFARIGNAYHKLGDLKKTIEYY--QK---------- 104 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc-cccchHHHHHHHHHHHHHHHHcccHHHHHHHH--HH----------
Confidence 356788999999999999999999999998643 33445566999999999999886553321100 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
... .. ...+.-.....++.|+.+|.+.
T Consensus 105 --a~~---------------------~~------------------------------~~~~~~~~~~~~~~a~~~~~~~ 131 (258)
T 3uq3_A 105 --SLT---------------------EH------------------------------RTADILTKLRNAEKELKKAEAE 131 (258)
T ss_dssp --HHH---------------------HC------------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHh---------------------cC------------------------------chhHHHHHHhHHHHHHHHHHHH
Confidence 000 00 0012222223344555555555
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
....+..+.++..+|.++...|+|++|+..|++++.+.. ..+.+|++||.+|...+++++|+.+|++++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 132 AYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP--------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc--------ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 444566778888888888888888888888888887642 224778888888888888888888888887664
No 47
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.36 E-value=2.9e-11 Score=100.94 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=115.6
Q ss_pred hhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCC
Q 017388 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDS 139 (372)
Q Consensus 60 ~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~ 139 (372)
......+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~a~~~~~~------------------ 60 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT------------------ 60 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT------------------
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHc------------------
Confidence 445678999999999999999999999999999997 688899999999998855
Q ss_pred CCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 017388 140 QQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 219 (372)
Q Consensus 140 ~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar 219 (372)
++++.|...++.++
T Consensus 61 ------------------------------------------------------------------~~~~~A~~~~~~a~ 74 (166)
T 1a17_A 61 ------------------------------------------------------------------ECYGYALGDATRAI 74 (166)
T ss_dssp ------------------------------------------------------------------TCHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------CCHHHHHHHHHHHH
Confidence 25777877787777
Q ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHH
Q 017388 220 AIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299 (372)
Q Consensus 220 ~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~e 299 (372)
.+. +..+.+|..+|.++...|+|++|+..|++++.+.. .++ .+..++.++..+...+++++|+.+|+
T Consensus 75 ~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-----~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~ 141 (166)
T 1a17_A 75 ELD-------KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HDK-DAKMKYQECNKIVKQKAFERAIAGDE 141 (166)
T ss_dssp HHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhC-------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----CCH-HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 653 34578999999999999999999999999998743 222 23334556666888889999999998
Q ss_pred HHHHHHH
Q 017388 300 KAISVCK 306 (372)
Q Consensus 300 kAl~i~~ 306 (372)
++..++.
T Consensus 142 ~~~~~~~ 148 (166)
T 1a17_A 142 HKRSVVD 148 (166)
T ss_dssp HHHHHHH
T ss_pred chHHHhc
Confidence 8877754
No 48
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.35 E-value=2.4e-11 Score=119.29 Aligned_cols=147 Identities=16% Similarity=0.123 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhC-CCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG-ELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~G-e~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
+..+..+|.+++.+|+|++|+.+|++|+++....++ ..+|..+.+|+++|.+++.++
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g---------------------- 108 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMG---------------------- 108 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcC----------------------
Confidence 556778999999999999999999999999988887 468999999999999999763
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
+++.|..+++.++.|+.+
T Consensus 109 --------------------------------------------------------------~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 109 --------------------------------------------------------------RLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp --------------------------------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ChHHHHHHHHHHHHHhHh
Confidence 455666666666666666
Q ss_pred hcCC-CccHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH---HhCCCchHHHHHH
Q 017388 225 HWGD-SMEKVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL---EIGSKPQEAIPYC 298 (372)
Q Consensus 225 ~~~~-~~~~A~~~~~LGev~~e~--~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~---~~~~~~~eAi~~~ 298 (372)
..+. .+..+.++..+|.+++.. ++|++|+.+|++||.+.+ ++ +.+|+.+|.++ ...+++++|+.+|
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p-----~~---~~~~~~~~~~~~~l~~~~~~~~al~~~ 198 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP-----KN---PEFTSGLAIASYRLDNWPPSQNAIDPL 198 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHHHHHSCCCCCTHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 5442 345666666666655443 357777777777776632 22 34455555443 3345556666666
Q ss_pred HHHHHH
Q 017388 299 QKAISV 304 (372)
Q Consensus 299 ekAl~i 304 (372)
++|+.+
T Consensus 199 ~~al~l 204 (472)
T 4g1t_A 199 RQAIRL 204 (472)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 666654
No 49
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=1.5e-11 Score=112.41 Aligned_cols=142 Identities=12% Similarity=0.094 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++... +.++....++|++|.+++.+
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~------------------------ 65 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-----RTHEWAADAQFYLARAYYQN------------------------ 65 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-----SCSTTHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHh------------------------
Confidence 6789999999999999999999999999862 33455599999999999955
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
+++..|...|+.++.++-.
T Consensus 66 ------------------------------------------------------------~~~~~A~~~~~~~l~~~p~- 84 (261)
T 3qky_A 66 ------------------------------------------------------------KEYLLAASEYERFIQIYQI- 84 (261)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHCTT-
T ss_pred ------------------------------------------------------------CcHHHHHHHHHHHHHHCCC-
Confidence 2677888888877776522
Q ss_pred cCCCccHHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH--------------HHHHH
Q 017388 226 WGDSMEKVDILSALAEVALE--------REDIETSLSDYQKALTILERMVEPDSRHIAELN--------------FRICL 283 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e--------~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~--------------~~Lg~ 283 (372)
.+....+|+.||.++.. .|+|++|+..|++++.+.+ +++....++ +.+|.
T Consensus 85 ---~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p-----~~~~~~~a~~~~~~~~~~~~~~~~~la~ 156 (261)
T 3qky_A 85 ---DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYP-----NHELVDDATQKIRELRAKLARKQYEAAR 156 (261)
T ss_dssp ---CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCT-----TCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCc-----CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24678999999999999 9999999999999998753 444444444 99999
Q ss_pred HHHhCCCchHHHHHHHHHHHHH
Q 017388 284 CLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 284 a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+|...|+|++|+.+|++++...
T Consensus 157 ~~~~~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 157 LYERRELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHccCHHHHHHHHHHHHHHC
Confidence 9999999999999999999764
No 50
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=3.5e-11 Score=114.23 Aligned_cols=88 Identities=18% Similarity=0.180 Sum_probs=67.7
Q ss_pred cCcChHHHHHHHHHHHHHHHHHhcCCCcc--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017388 203 EDESDLDLAWKMLDVARAIAEKHWGDSME--KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFR 280 (372)
Q Consensus 203 ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~--~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~ 280 (372)
...++++.|..+++.++.+. +. .+.++..||.++...|+|++|+..|++++.+.+ ..+.+|++
T Consensus 188 ~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~ 252 (365)
T 4eqf_A 188 VDSSVLEGVKELYLEAAHQN-------GDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP--------EDYSLWNR 252 (365)
T ss_dssp -CCHHHHHHHHHHHHHHHHS-------CSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHhC-------cCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--------CCHHHHHH
Confidence 34566777777777666552 22 577889999999999999999999999988742 23578888
Q ss_pred HHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 281 ICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 281 Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
||.+|...|++++|+.+|++++.+.
T Consensus 253 l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 253 LGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 8888888888888888888888764
No 51
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.34 E-value=7.2e-12 Score=124.31 Aligned_cols=159 Identities=9% Similarity=-0.007 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhh-hhcCccc--CCCCccCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ-EEADPLV--SVPKKEGDSQ 140 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar-~es~vLg--~~~~~~~e~~ 140 (372)
..+..+..+|..+...|+|++|+.+|.+|+.+ +|..+.+|+++|.+|+.+++ .+.++-- .+..
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~------ 160 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIE------ 160 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH------
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHH------
Confidence 45777889999999999999999999999998 79999999999999998865 4322100 0000
Q ss_pred CCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH------
Q 017388 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM------ 214 (372)
Q Consensus 141 ~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~------ 214 (372)
..++...+|-.
T Consensus 161 ---------------------------------------------------------------l~P~~~~a~~~~g~~~~ 177 (382)
T 2h6f_A 161 ---------------------------------------------------------------EQPKNYQVWHHRRVLVE 177 (382)
T ss_dssp ---------------------------------------------------------------HCTTCHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------HCCCCHHHHHHHHHHHH
Confidence 00011111211
Q ss_pred ----HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh-CC
Q 017388 215 ----LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI-GS 289 (372)
Q Consensus 215 ----Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~-~~ 289 (372)
++.|+..|.+.+...+.-+.+|.++|.++...|+|++|+.+|+++|.+.. .-+.+|+++|.+|.. .+
T Consensus 178 ~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P--------~~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 178 WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV--------RNNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTC
T ss_pred HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHhcC
Confidence 23344445444444566788888888888888888888888888888743 335888888888888 55
Q ss_pred CchHH-----HHHHHHHHHHHHH
Q 017388 290 KPQEA-----IPYCQKAISVCKS 307 (372)
Q Consensus 290 ~~~eA-----i~~~ekAl~i~~~ 307 (372)
.+++| +.+|++||.+-..
T Consensus 250 ~~~eA~~~~el~~~~~Al~l~P~ 272 (382)
T 2h6f_A 250 YNDRAVLEREVQYTLEMIKLVPH 272 (382)
T ss_dssp SCSHHHHHHHHHHHHHHHHHSTT
T ss_pred cchHHHHHHHHHHHHHHHHHCCC
Confidence 55777 4888888887754
No 52
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.34 E-value=2.4e-11 Score=115.45 Aligned_cols=168 Identities=15% Similarity=0.065 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++.+++.+.++-- .+...
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 128 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQ--------DPGDAEAWQFLGITQAENENEQAAIVALQRCLEL-------- 128 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------
Confidence 446889999999999999999999999998 688899999999999987654322100 00000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++... ..- -..+......++++.|..+|+.++.+..
T Consensus 129 ----------~p~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~al~~~p 164 (365)
T 4eqf_A 129 ----------QPNNL------KAL----------------------------MALAVSYTNTSHQQDACEALKNWIKQNP 164 (365)
T ss_dssp ----------CTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred ----------CCCCH------HHH----------------------------HHHHHHHHccccHHHHHHHHHHHHHhCc
Confidence 00000 000 0000001112355555555555554332
Q ss_pred HhcCCCccHHHHHH----------HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchH
Q 017388 224 KHWGDSMEKVDILS----------ALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 293 (372)
Q Consensus 224 k~~~~~~~~A~~~~----------~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~e 293 (372)
....++. .+|.++...|+|++|+..|++++.+.. .+ ..+.+|++||.+|...|++++
T Consensus 165 -------~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-----~~-~~~~~~~~l~~~~~~~g~~~~ 231 (365)
T 4eqf_A 165 -------KYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNG-----DM-IDPDLQTGLGVLFHLSGEFNR 231 (365)
T ss_dssp -------HHHCC-------------------CCHHHHHHHHHHHHHHHHSC-----SS-CCHHHHHHHHHHHHHHTCHHH
T ss_pred -------cchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCc-----Cc-cCHHHHHHHHHHHHHCCCHHH
Confidence 2222332 347777777777777777777776632 10 046789999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 294 AIPYCQKAISVCK 306 (372)
Q Consensus 294 Ai~~~ekAl~i~~ 306 (372)
|+.+|++++.+..
T Consensus 232 A~~~~~~al~~~p 244 (365)
T 4eqf_A 232 AIDAFNAALTVRP 244 (365)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998743
No 53
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.32 E-value=1.2e-10 Score=101.40 Aligned_cols=169 Identities=10% Similarity=-0.003 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQG 142 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~ 142 (372)
.+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.+.+. +......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------- 71 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSI------- 71 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh-------
Confidence 4667889999999999999999999999997 5788899999999999887654321 1000000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCc-ChHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDE-SDLDLAWKMLDVARAI 221 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~-~dl~~Awe~Le~Ar~I 221 (372)
.+... ..- -..+...-.. ++++.|...++.++.
T Consensus 72 -----------~~~~~------~~~----------------------------~~l~~~~~~~~~~~~~A~~~~~~~~~- 105 (225)
T 2vq2_A 72 -----------KPDSA------EIN----------------------------NNYGWFLCGRLNRPAESMAYFDKALA- 105 (225)
T ss_dssp -----------CTTCH------HHH----------------------------HHHHHHHHTTTCCHHHHHHHHHHHHT-
T ss_pred -----------CCCCh------HHH----------------------------HHHHHHHHHhcCcHHHHHHHHHHHHc-
Confidence 00000 000 0000011224 567777776666654
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
....+....++..+|.++...|+|++|+..|++++.+. |....+++.||.+|...|++++|+.+|+++
T Consensus 106 ----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 173 (225)
T 2vq2_A 106 ----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ--------PQFPPAFKELARTKMLAGQLGDADYYFKKY 173 (225)
T ss_dssp ----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCchHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 12346788999999999999999999999999999862 233678999999999999999999999999
Q ss_pred HHHHH
Q 017388 302 ISVCK 306 (372)
Q Consensus 302 l~i~~ 306 (372)
+.+..
T Consensus 174 ~~~~~ 178 (225)
T 2vq2_A 174 QSRVE 178 (225)
T ss_dssp HHHHC
T ss_pred HHhCC
Confidence 98865
No 54
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.32 E-value=8.3e-11 Score=107.44 Aligned_cols=170 Identities=14% Similarity=0.098 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
...++.+|..++.+|+|++|+.+|.+++.+. +.+|....+||.+|.+++..+.. .
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~~~~--------~------------ 106 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QIDPRVPQAEYERAMCYYKLSPP--------Y------------ 106 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHCCC--------T------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCCchhHHHHHHHHHHHHHhccc--------c------------
Confidence 5678899999999999999999999999983 34568899999999999976210 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
..+.+++..|...|+.++.++-..
T Consensus 107 --------------------------------------------------------~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 107 --------------------------------------------------------ELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp --------------------------------------------------------TSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred --------------------------------------------------------cccchhHHHHHHHHHHHHHHCcCc
Confidence 001357777877777776654221
Q ss_pred cCC----------CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC-------
Q 017388 226 WGD----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------- 288 (372)
Q Consensus 226 ~~~----------~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~------- 288 (372)
... ...++..++.+|.++...|+|++|+..|+++|.+. |+++....+++.||.+|...
T Consensus 131 ~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~ 205 (261)
T 3qky_A 131 ELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRA 205 (261)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhh
Confidence 110 01234445999999999999999999999999864 45667889999999999977
Q ss_pred ---CCchHHHHHHHHHHHHH---------HHHHHHHHHHHHhhcc
Q 017388 289 ---SKPQEAIPYCQKAISVC---------KSRVQRLLNEVKSLGE 321 (372)
Q Consensus 289 ---~~~~eAi~~~ekAl~i~---------~~rl~~l~~~~~~~~~ 321 (372)
+++++|+.+|++++... ..++..+...+....+
T Consensus 206 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~~ 250 (261)
T 3qky_A 206 RQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELEG 250 (261)
T ss_dssp GHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhhh
Confidence 89999999999999753 3456666666665543
No 55
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.31 E-value=6.7e-11 Score=104.35 Aligned_cols=125 Identities=18% Similarity=0.050 Sum_probs=105.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhC----CCChhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG----ELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~G----e~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~ 134 (372)
|-+....|..++++|..++..|+|++|+.+|.+|+++.-.... ...|..+.+|++.|.+|..+
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L------------- 70 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL------------- 70 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT-------------
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC-------------
Confidence 4455678999999999999999999999999999999643110 11233566999999999976
Q ss_pred ccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH
Q 017388 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (372)
Q Consensus 135 ~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~ 214 (372)
++++.|...
T Consensus 71 -----------------------------------------------------------------------gr~~eAl~~ 79 (159)
T 2hr2_A 71 -----------------------------------------------------------------------RSFDEALHS 79 (159)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------CCHHHHHHH
Confidence 267788888
Q ss_pred HHHHHHHHHHhcCCCccHHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 017388 215 LDVARAIAEKHWGDSMEKVDIL----SALAEVALEREDIETSLSDYQKALTILERMV 267 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~----~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~ 267 (372)
++.|+.+|.+.....+..+.+| +++|.++..+|+|++|+.+|++||.|...--
T Consensus 80 ~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 80 ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 9999999999988788899999 9999999999999999999999999987643
No 56
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.30 E-value=6.9e-11 Score=105.89 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~ 142 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++..++.+.+.-- ....
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-------- 99 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEI--------DPSSADAHAALAVVFQTEMEPKLADEEYRKALA-------- 99 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------
Confidence 4788999999999999999999999999988 577889999999999988655332100 0000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
.++... ..-- ..+...-..+++ +.|+.+|
T Consensus 100 ----------~~~~~~------~~~~----------------------------~la~~~~~~g~~-------~~A~~~~ 128 (252)
T 2ho1_A 100 ----------SDSRNA------RVLN----------------------------NYGGFLYEQKRY-------EEAYQRL 128 (252)
T ss_dssp ----------HCTTCH------HHHH----------------------------HHHHHHHHTTCH-------HHHHHHH
T ss_pred ----------HCcCcH------HHHH----------------------------HHHHHHHHHhHH-------HHHHHHH
Confidence 000000 0000 000000011234 4455555
Q ss_pred HHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 017388 223 EKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (372)
Q Consensus 223 ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ek 300 (372)
.+... ..+..+.++..+|.++...|+|++|+..|++++.+. +....+++.||.+|...+++++|+.+|++
T Consensus 129 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 200 (252)
T 2ho1_A 129 LEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN--------RNQPSVALEMADLLYKEREYVPARQYYDL 200 (252)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------SCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------cccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 55544 456789999999999999999999999999999863 23368899999999999999999999999
Q ss_pred HHHHH
Q 017388 301 AISVC 305 (372)
Q Consensus 301 Al~i~ 305 (372)
++.+.
T Consensus 201 ~~~~~ 205 (252)
T 2ho1_A 201 FAQGG 205 (252)
T ss_dssp HHTTS
T ss_pred HHHhC
Confidence 98764
No 57
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.30 E-value=1.9e-10 Score=91.15 Aligned_cols=131 Identities=26% Similarity=0.359 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCc
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d 146 (372)
..++.+|..++..|+|++|..+|.+++.+ +|....+++.+|.+++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~------------------------- 48 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQ------------------------- 48 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-------------------------
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc--------CCcchhHHHHHHHHHHHh-------------------------
Confidence 34678999999999999999999999987 567788999999888855
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 017388 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (372)
Q Consensus 147 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~ 226 (372)
++++.|..+++.+..+.
T Consensus 49 -----------------------------------------------------------~~~~~A~~~~~~~~~~~---- 65 (136)
T 2fo7_A 49 -----------------------------------------------------------GDYDEAIEYYQKALELD---- 65 (136)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHC----
T ss_pred -----------------------------------------------------------cCHHHHHHHHHHHHHHC----
Confidence 25666777777766542
Q ss_pred CCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 227 ~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
+....++..+|.++...|+|++|+..|++++.+.. ....+++.+|.+|...|++++|+.+|++++.+
T Consensus 66 ---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 66 ---PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp ---TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred ---CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 33467899999999999999999999999998632 22578999999999999999999999999875
No 58
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.30 E-value=8.2e-11 Score=110.90 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.+.++..||.++...|+|++|+..|++++.+. |..+.+|++||.+|...|++++|+.+|++++.+.
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR--------PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56777778888888888888888888777762 2234677777777777777777777777777653
No 59
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.30 E-value=3.9e-12 Score=110.21 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...|+.++.+ .|..+.+|.+||.++...|+|++|+..|++|+.+.+. + +.+|++||.||.
T Consensus 51 ~~~eA~~~~~~al~~-------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~-----~---~~~~~~lg~~~~ 115 (151)
T 3gyz_A 51 RIEEAEVFFRFLCIY-------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN-----D---YTPVFHTGQCQL 115 (151)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS-----C---CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC-----C---cHHHHHHHHHHH
Confidence 566666666666654 4567899999999999999999999999999999643 2 479999999999
Q ss_pred hCCCchHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~ 305 (372)
..|++++|+.+|++|+.+.
T Consensus 116 ~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999874
No 60
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=3.9e-11 Score=108.53 Aligned_cols=175 Identities=10% Similarity=-0.007 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++.+++.+.++-- .+... .+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~ 139 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP------TT 139 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS------SC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc------CC
Confidence 445677888888888888888888888886 577777888888888877665433111 00000 00
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
... ..- -..+...-...+++.|...|+.+..+
T Consensus 140 ------------~~~------~~~----------------------------~~l~~~~~~~~~~~~A~~~~~~a~~~-- 171 (272)
T 3u4t_A 140 ------------TDP------KVF----------------------------YELGQAYYYNKEYVKADSSFVKVLEL-- 171 (272)
T ss_dssp ------------CCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ------------CcH------HHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 000 000 00000000011455555555555443
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ek 300 (372)
.+....++..+|.++...++ |++|+..|++++.+......+....++.+|+.||.+|...|++++|+.+|++
T Consensus 172 -----~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 246 (272)
T 3u4t_A 172 -----KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKN 246 (272)
T ss_dssp -----STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----CccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34557899999999999999 9999999999999997665443455789999999999999999999999999
Q ss_pred HHHHHHH
Q 017388 301 AISVCKS 307 (372)
Q Consensus 301 Al~i~~~ 307 (372)
++.+...
T Consensus 247 al~~~p~ 253 (272)
T 3u4t_A 247 ILALDPT 253 (272)
T ss_dssp HHHHCTT
T ss_pred HHhcCcc
Confidence 9987543
No 61
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.29 E-value=3.1e-10 Score=95.21 Aligned_cols=166 Identities=13% Similarity=0.108 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~ 142 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ +|....+++.+|.+++..++.+.+.-- .....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------- 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDA--------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD------- 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT--------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------
Confidence 3566778888888888888888888888765 466678888888888877654322100 00000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
.+... ..-- ..+...-..++++.|+.+++.+..+
T Consensus 72 -----------~~~~~------~~~~----------------------------~~a~~~~~~~~~~~A~~~~~~~~~~- 105 (186)
T 3as5_A 72 -----------APDNV------KVAT----------------------------VLGLTYVQVQKYDLAVPLLIKVAEA- 105 (186)
T ss_dssp -----------CTTCH------HHHH----------------------------HHHHHHHHHTCHHHHHHHHHHHHHH-
T ss_pred -----------CCCCH------HHHH----------------------------HHHHHHHHhcCHHHHHHHHHHHHhc-
Confidence 00000 0000 0000001124566666666666554
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
.+....++..+|.++...|+|++|+..|++++.+.. ....+++.+|.+|...|++++|+.+|++++
T Consensus 106 ------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 106 ------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP--------NEGKVHRAIAFSYEQMGRHEEALPHFKKAN 171 (186)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc--------cchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 234578899999999999999999999999998742 225889999999999999999999999998
Q ss_pred HHH
Q 017388 303 SVC 305 (372)
Q Consensus 303 ~i~ 305 (372)
.+.
T Consensus 172 ~~~ 174 (186)
T 3as5_A 172 ELD 174 (186)
T ss_dssp HHH
T ss_pred HcC
Confidence 764
No 62
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.29 E-value=1.2e-10 Score=100.65 Aligned_cols=99 Identities=11% Similarity=0.067 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|..+++.|+.++.+.. ..+..+.++.+||.++...|+|++|+..|++++.+.+.. +.+.+..+.++++||.+|.
T Consensus 41 ~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 41 RFDEARASFQALQQQAQKSG-DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVAL 118 (203)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHH
Confidence 68889999999999998763 346789999999999999999999999999999999853 3344578999999999999
Q ss_pred hCCCchHHHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~~~ 307 (372)
..|++++|+.+|++++.+.+.
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998653
No 63
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.29 E-value=2.3e-11 Score=122.94 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCC
Q 017388 66 ADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy-~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~ 142 (372)
+..++.+|..++..|+| ++|+.+|.+|+++ .|..+.+|+.+|.+++.+++.+.+.-- .+... .
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------~ 167 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH------C 167 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT------C
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------C
Confidence 66788999999999999 9999999999998 689999999999999999876543111 00000 0
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
++ ..... ..... .... . . +...+..++++.|...|+.|+.+
T Consensus 168 p~-~~~~~--------------~lg~~--~~~~---~---~---------------~~~~~~~g~~~~A~~~~~~al~~- 208 (474)
T 4abn_A 168 KN-KVSLQ--------------NLSMV--LRQL---Q---T---------------DSGDEHSRHVMDSVRQAKLAVQM- 208 (474)
T ss_dssp CC-HHHHH--------------HHHHH--HTTC---C---C---------------SCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CC-HHHHH--------------HHHHH--HHHh---c---c---------------CChhhhhhhHHHHHHHHHHHHHh-
Confidence 00 00000 00000 0000 0 0 00011225777777777776665
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALER--------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~--------~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
.+..+.+|.+||.+++.. |+|++|+..|++|+.+... ++..+.+|++||.+|...|+|++|
T Consensus 209 ------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 209 ------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK-----ASSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG-----GGGCHHHHHHHHHHHHHTTCHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC-----cccCHHHHHHHHHHHHHcCCHHHH
Confidence 355688999999999999 9999999999999998431 236689999999999999999999
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
+.+|++|+.+.
T Consensus 278 ~~~~~~al~l~ 288 (474)
T 4abn_A 278 LEGFSQAAALD 288 (474)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999764
No 64
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.28 E-value=2.1e-10 Score=109.56 Aligned_cols=153 Identities=16% Similarity=0.047 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~-pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
.+.-++.+|..++..|+|++|..+|.+|+.+. .... ...+.+++.+|.+++..
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------- 66 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCK---------------------- 66 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhc----------------------
Confidence 45667889999999999999999999999864 2222 23566788888877744
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|..+++.|+.++.
T Consensus 67 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 84 (373)
T 1hz4_A 67 --------------------------------------------------------------GELTRSLALMQQTEQMAR 84 (373)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CcHHHHHHHHHHHHHHHH
Confidence 367888999999999987
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.. .....+.++.+||.++...|+|++|+..|+++|.+.+...++.++..+.++++||.+|...|++++|+.+|++++.
T Consensus 85 ~~~-~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 163 (373)
T 1hz4_A 85 QHD-VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIE 163 (373)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcC-cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 753 3345688899999999999999999999999999999988777888999999999999999999999999999998
Q ss_pred HHH
Q 017388 304 VCK 306 (372)
Q Consensus 304 i~~ 306 (372)
+..
T Consensus 164 ~~~ 166 (373)
T 1hz4_A 164 VLS 166 (373)
T ss_dssp HTT
T ss_pred Hhh
Confidence 754
No 65
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.28 E-value=9e-11 Score=108.18 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=75.2
Q ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHHHHHhCCCchHH
Q 017388 216 DVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDS-RHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~-r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
+.|+..|.+.....+..+.++..+|.++...|+|++|+..|++++.+.+....... +..+.+|++||.+|...|++++|
T Consensus 176 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 255 (330)
T 3hym_B 176 KLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEA 255 (330)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHH
Confidence 44555555555545667899999999999999999999999999999887655443 45678999999999999999999
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
+.+|++++.+.
T Consensus 256 ~~~~~~a~~~~ 266 (330)
T 3hym_B 256 LDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhC
Confidence 99999999764
No 66
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.27 E-value=8e-11 Score=97.77 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+|+.|.+.|+.|+.+ .+..+.+|.++|.++..+|+|++|+.+|++||.+.. ..+.+|++||.+|.
T Consensus 28 ~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 28 DYPTAMRHYNEAVKR-------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS--------KFIKGYIRKAACLV 92 (126)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh--------hhhHHHHHHHHHHH
Confidence 677888888877754 355689999999999999999999999999999843 33689999999999
Q ss_pred hCCCchHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~ 305 (372)
.+|+|++|+.+|+++|.+-
T Consensus 93 ~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHC
Confidence 9999999999999999873
No 67
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.27 E-value=1.6e-11 Score=106.39 Aligned_cols=158 Identities=11% Similarity=0.063 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCCC
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGSD 144 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~~ 144 (372)
..++.+|..++..|+|++|+.+|.+++++ +|..+.+++.+|.+++..++.+..+ +-......
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~-------- 70 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEY-------- 70 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG--------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc--------
Confidence 35788999999999999999999999998 5999999999999999887764431 11111000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHH--HH-HHHH-----
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDL--AW-KMLD----- 216 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~--Aw-e~Le----- 216 (372)
....+.. ++ .+..
T Consensus 71 -----------------------------------------------------------p~~~~~~~~~~~~~~~~~~~~ 91 (176)
T 2r5s_A 71 -----------------------------------------------------------QDNSYKSLIAKLELHQQAAES 91 (176)
T ss_dssp -----------------------------------------------------------CCHHHHHHHHHHHHHHHHTSC
T ss_pred -----------------------------------------------------------CChHHHHHHHHHHHHhhcccc
Confidence 0000000 00 0000
Q ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHH
Q 017388 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 296 (372)
Q Consensus 217 ~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~ 296 (372)
.|+..|++.....|.-..+|.+||.++...|+|++|+..|+++|.+.+.. .-..++++||.+|...|++++|+.
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~a~~~l~~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA------QDGEVKKTFMDILSALGQGNAIAS 165 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT------TTTHHHHHHHHHHHHHCSSCHHHH
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc------ChHHHHHHHHHHHHHhCCCCcHHH
Confidence 12444444444346678999999999999999999999999999875322 124689999999999999999999
Q ss_pred HHHHHHHHH
Q 017388 297 YCQKAISVC 305 (372)
Q Consensus 297 ~~ekAl~i~ 305 (372)
+|+++|..+
T Consensus 166 ~y~~al~~~ 174 (176)
T 2r5s_A 166 KYRRQLYSI 174 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998753
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.27 E-value=7e-11 Score=111.21 Aligned_cols=162 Identities=11% Similarity=0.071 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcC--cccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEAD--PLVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~--vLg~~~~~~~e~~~~~ 143 (372)
...++.+|..++..|+|++|+.+|++++.+ .|..+.+++.+|.+|+..++.+.+ .|...+... +
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~------p 182 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQL--------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD------Q 182 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG------C
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh------c
Confidence 467899999999999999999999999998 699999999999999999876543 111111100 0
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHH-----HHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKML-----DVA 218 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~L-----e~A 218 (372)
. .....+..+..++ +.|
T Consensus 183 ---------------------~-------------------------------------~~~~~~~~~~~l~~~~~~~~a 204 (287)
T 3qou_A 183 ---------------------D-------------------------------------TRYQGLVAQIELLXQAADTPE 204 (287)
T ss_dssp ---------------------S-------------------------------------HHHHHHHHHHHHHHHHTSCHH
T ss_pred ---------------------c-------------------------------------hHHHHHHHHHHHHhhcccCcc
Confidence 0 0000111111111 113
Q ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHH
Q 017388 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (372)
Q Consensus 219 r~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ 298 (372)
...|++.....|.-..++++||.++...|+|++|+..|+++|.+.+.. .-+.++.+||.+|...|+.++|+.+|
T Consensus 205 ~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~------~~~~a~~~l~~~~~~~g~~~~a~~~~ 278 (287)
T 3qou_A 205 IQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA------ADGQTRXTFQEILAALGTGDALASXY 278 (287)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG------GGGHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc------ccchHHHHHHHHHHHcCCCCcHHHHH
Confidence 444555444456778999999999999999999999999999986433 12588999999999999999999999
Q ss_pred HHHHHHH
Q 017388 299 QKAISVC 305 (372)
Q Consensus 299 ekAl~i~ 305 (372)
+++|..+
T Consensus 279 r~al~~~ 285 (287)
T 3qou_A 279 RRQLYAL 285 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 69
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.26 E-value=1e-10 Score=112.24 Aligned_cols=166 Identities=16% Similarity=0.126 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccC--CCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVS--VPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~--~~~~~~e~~~~~ 143 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++..++.+..+--. ..+
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--------- 129 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQ--------- 129 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHH---------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHc--------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 345677788888888888888888888776 5777778888888887775543221000 000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.++... ... -..+......++++.|..+|+.+..+
T Consensus 130 ---------~~p~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~al~~-- 164 (388)
T 1w3b_A 130 ---------YNPDLY------CVR----------------------------SDLGNLLKALGRLEEAKACYLKAIET-- 164 (388)
T ss_dssp ---------HCTTCT------HHH----------------------------HHHHHHHHTTSCHHHHHHHHHHHHHH--
T ss_pred ---------hCCCcH------HHH----------------------------HHHHHHHHHccCHHHHHHHHHHHHHh--
Confidence 000000 000 00000011235667776666666543
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.+..+.+|.+||.++...|+|++|+..|++++.+. |....+|++||.+|...+++++|+.+|++++.
T Consensus 165 -----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 231 (388)
T 1w3b_A 165 -----QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD--------PNFLDAYINLGNVLKEARIFDRAVAAYLRALS 231 (388)
T ss_dssp -----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999873 34468999999999999999999999999998
Q ss_pred HHH
Q 017388 304 VCK 306 (372)
Q Consensus 304 i~~ 306 (372)
+..
T Consensus 232 ~~p 234 (388)
T 1w3b_A 232 LSP 234 (388)
T ss_dssp HCT
T ss_pred hCc
Confidence 754
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.25 E-value=7.7e-11 Score=106.27 Aligned_cols=173 Identities=18% Similarity=0.020 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQ 141 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~ 141 (372)
..+..++.+|..++..|+|++|+.+|.+++.+ +|..+.+|+.+|.+++..++.+.++-- .+...
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------ 106 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL------ 106 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------
Confidence 34778899999999999999999999999998 688899999999999988655332110 00000
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
++... ..- -..+...-..++++.|...++.++.+
T Consensus 107 ------------~~~~~------~~~----------------------------~~la~~~~~~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 107 ------------DPTYN------YAH----------------------------LNRGIALYYGGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp ------------CTTCT------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------------Ccccc------HHH----------------------------HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 00000 000 00000011234666666666666553
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH--------------------------HHHhcCCC---Ch
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI--------------------------LERMVEPD---SR 272 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I--------------------------~~~l~~~~---~r 272 (372)
.. .....+..++ +....|+|++|+..|++++.. ..+.+... .+
T Consensus 141 ~~-------~~~~~~~~~~-~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (275)
T 1xnf_A 141 DP-------NDPFRSLWLY-LAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAE 212 (275)
T ss_dssp CT-------TCHHHHHHHH-HHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHH
T ss_pred CC-------CChHHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccc
Confidence 21 1112222222 335557777777777555443 22222111 12
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 273 HIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 273 ~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
..+.+|+.||.+|...|++++|+.+|++++.+
T Consensus 213 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 244 (275)
T 1xnf_A 213 HLSETNFYLGKYYLSLGDLDSATALFKLAVAN 244 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 34789999999999999999999999999875
No 71
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=5.2e-10 Score=90.73 Aligned_cols=122 Identities=16% Similarity=0.094 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+++.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~----------------------- 51 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKL----------------------- 51 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHh-----------------------
Confidence 5778999999999999999999999999998 688899999999999965
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.|+.+
T Consensus 52 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 67 (126)
T 3upv_A 52 -------------------------------------------------------------MSFPEAIADCNKAIEK--- 67 (126)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHh---
Confidence 2567777777777765
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~ 287 (372)
.+....+|..+|.++...|+|++|+.+|++++.+.+... ..|....++..|+.+...
T Consensus 68 ----~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 ----DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHh
Confidence 245688999999999999999999999999999987654 334445677777776654
No 72
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.25 E-value=1.6e-10 Score=111.49 Aligned_cols=147 Identities=15% Similarity=0.131 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-------CCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-------GELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-------Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~ 134 (372)
....+..+..+|..++..|+|++|+.+|.+|+.+.-... ....+..+.+|+++|.+++.+
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 209 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL------------- 209 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc-------------
Confidence 345688999999999999999999999999999842110 001222379999999999965
Q ss_pred ccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH
Q 017388 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (372)
Q Consensus 135 ~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~ 214 (372)
++++.|...
T Consensus 210 -----------------------------------------------------------------------g~~~~A~~~ 218 (336)
T 1p5q_A 210 -----------------------------------------------------------------------QAFSAAIES 218 (336)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------CCHHHHHHH
Confidence 257777777
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
++.|+.+ .+..+.+|+++|.++..+|+|++|+.+|++||.+.. ....++++||.+|...+++++|
T Consensus 219 ~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P--------~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 219 CNKALEL-------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP--------NNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp HHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHHHHHHHH
Confidence 7777765 245688999999999999999999999999999843 3357999999999999999988
Q ss_pred -HHHHHHHHHHHHH
Q 017388 295 -IPYCQKAISVCKS 307 (372)
Q Consensus 295 -i~~~ekAl~i~~~ 307 (372)
...|++.+..+..
T Consensus 284 ~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 284 EKKLYANMFERLAE 297 (336)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 5677777654433
No 73
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.24 E-value=1.3e-10 Score=97.60 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=71.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...++.+..+ .+....++..+|.++...|+|++|+..|++++.+.. ..+.+++.+|.+|
T Consensus 56 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~~a~~~ 120 (186)
T 3as5_A 56 GAVDRGTELLERSLAD-------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP--------INFNVRFRLGVAL 120 (186)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc--------HhHHHHHHHHHHH
Confidence 4677777777666654 244578999999999999999999999999998732 2358899999999
Q ss_pred HhCCCchHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~ 306 (372)
...|++++|+.+|++++.+..
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT
T ss_pred HHcCcHHHHHHHHHHHHhcCc
Confidence 999999999999999998753
No 74
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.24 E-value=3.9e-11 Score=108.55 Aligned_cols=168 Identities=11% Similarity=0.068 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccC--CCCccCCCCCCCC
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVS--VPKKEGDSQQGSD 144 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~--~~~~~~e~~~~~~ 144 (372)
..++..|..++..|+|++|+.+|.+++++ .|....+++.+|.+++.+++.+.++--. .... +.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~- 68 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAK--------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK------VN- 68 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHT--------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT------SC-
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc------cC-
Confidence 45788999999999999999999999987 5777789999999999887764331100 0000 00
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
+ .... ...- -..+...-..++++.|...++.+..
T Consensus 69 -~--------~~~~-----~~~~----------------------------~~lg~~~~~~~~~~~A~~~~~~a~~---- 102 (272)
T 3u4t_A 69 -A--------TKAK-----SADF----------------------------EYYGKILMKKGQDSLAIQQYQAAVD---- 102 (272)
T ss_dssp -T--------TTCC-----HHHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHH----
T ss_pred -c--------hhHH-----HHHH----------------------------HHHHHHHHHcccHHHHHHHHHHHHh----
Confidence 0 0000 0000 0000001122455555555555554
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHhCCCchHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg-~a~~~~~~~~eAi~~~ekAl~ 303 (372)
..+..+.++..||.++...|+|++|+..|++++.+ +|..+.+|++|| .+|.. +++++|+.+|++++.
T Consensus 103 ---~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~ 170 (272)
T 3u4t_A 103 ---RDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--------TTTDPKVFYELGQAYYYN-KEYVKADSSFVKVLE 170 (272)
T ss_dssp ---HSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--------SCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred ---cCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--------CCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 23556789999999999999999999999999987 344568999999 65554 599999999999999
Q ss_pred HHHH
Q 017388 304 VCKS 307 (372)
Q Consensus 304 i~~~ 307 (372)
+...
T Consensus 171 ~~p~ 174 (272)
T 3u4t_A 171 LKPN 174 (272)
T ss_dssp HSTT
T ss_pred hCcc
Confidence 8654
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.23 E-value=1.7e-10 Score=106.22 Aligned_cols=145 Identities=13% Similarity=0.094 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
...+..+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~------------------------ 219 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGATLANG------------------------ 219 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc------------------------
Confidence 345666777777778888888877777776 466667777777777743
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|..+++.++.+.
T Consensus 220 ------------------------------------------------------------~~~~~A~~~~~~a~~~~--- 236 (327)
T 3cv0_A 220 ------------------------------------------------------------NRPQEALDAYNRALDIN--- 236 (327)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHcC---
Confidence 35667777777766542
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh----hHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR----HIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r----~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
+....++..||.++...|+|++|+..|++++.+.+...+..+. ....+|+.||.+|...|++++|+.+|+++
T Consensus 237 ----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 312 (327)
T 3cv0_A 237 ----PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQN 312 (327)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999998664333322 26899999999999999999999999999
Q ss_pred HHHHHHHH
Q 017388 302 ISVCKSRV 309 (372)
Q Consensus 302 l~i~~~rl 309 (372)
+.+++..+
T Consensus 313 l~~~~~~~ 320 (327)
T 3cv0_A 313 VEPFAKEF 320 (327)
T ss_dssp SHHHHHHT
T ss_pred HHhcchhh
Confidence 99887653
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.23 E-value=4.7e-10 Score=97.52 Aligned_cols=167 Identities=13% Similarity=0.016 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHh-hhhhcCccc--CCCCccCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK-AQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~-ar~es~vLg--~~~~~~~e~~~~ 142 (372)
...+..+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++.. ++.+...-- .... .
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~--- 106 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSI--------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA----D--- 106 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----S---
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----C---
Confidence 446788999999999999999999999987 577888999999999988 765432110 0000 0
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
+.. +..... . -..+......++++.|..+++.+..+
T Consensus 107 ------------~~~------~~~~~~--------~-----------------~~l~~~~~~~~~~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 107 ------------PTY------PTPYIA--------N-----------------LNKGICSAKQGQFGLAEAYLKRSLAA- 142 (225)
T ss_dssp ------------TTC------SCHHHH--------H-----------------HHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred ------------cCC------cchHHH--------H-----------------HHHHHHHHHcCCHHHHHHHHHHHHHh-
Confidence 000 000000 0 00000011234566666666655543
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
.+....++..||.++...|+|++|+..|++++.+.. ..+ ...++.++.++...++++.|..+++.++
T Consensus 143 ------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 143 ------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE----VLQ---ADDLLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp ------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC----SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCC---HHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 344588999999999999999999999999998753 122 4668899999999999999999988876
Q ss_pred HH
Q 017388 303 SV 304 (372)
Q Consensus 303 ~i 304 (372)
.+
T Consensus 210 ~~ 211 (225)
T 2vq2_A 210 AN 211 (225)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 77
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=1.4e-10 Score=111.26 Aligned_cols=164 Identities=19% Similarity=0.180 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
...++.+|..+...|+|++|+.+|.+++.+ +|..+.+|+.+|.+++..++.+..+-- .+...
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 266 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL-------- 266 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------
Confidence 567889999999999999999999999998 688899999999999988765432110 00000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++... ..- -..+......++++.|+.+++.++.+
T Consensus 267 ----------~p~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~al~~-- 300 (388)
T 1w3b_A 267 ----------QPHFP------DAY----------------------------CNLANALKEKGSVAEAEDCYNTALRL-- 300 (388)
T ss_dssp ----------CSSCH------HHH----------------------------HHHHHHHHHHSCHHHHHHHHHHHHHH--
T ss_pred ----------CCCCH------HHH----------------------------HHHHHHHHHcCCHHHHHHHHHHHHhh--
Confidence 00000 000 00000011234667777777766654
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.+..+.+|..||.++...|+|++|+..|++++.+. |..+.+|++||.+|...|++++|+.+|++++.
T Consensus 301 -----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 301 -----CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF--------PEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp -----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC--------TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred -----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 24567899999999999999999999999998752 34578999999999999999999999999987
Q ss_pred H
Q 017388 304 V 304 (372)
Q Consensus 304 i 304 (372)
+
T Consensus 368 ~ 368 (388)
T 1w3b_A 368 I 368 (388)
T ss_dssp T
T ss_pred h
Confidence 5
No 78
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.22 E-value=6.6e-11 Score=109.10 Aligned_cols=173 Identities=13% Similarity=0.078 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
...++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..++.+.+.-- .....
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------- 188 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQL--------MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSI-------- 188 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------
Confidence 345889999999999999999999999998 477788899999999988765432110 00000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++... ..- -..+...-..++++.|...++.+..++.
T Consensus 189 ----------~~~~~------~~~----------------------------~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 224 (330)
T 3hym_B 189 ----------APEDP------FVM----------------------------HEVGVVAFQNGEWKTAEKWFLDALEKIK 224 (330)
T ss_dssp ----------CTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ----------CCCCh------HHH----------------------------HHHHHHHHHcccHHHHHHHHHHHHHHhh
Confidence 00000 000 0000011124688999999999998886
Q ss_pred HhcCC--CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 224 KHWGD--SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 224 k~~~~--~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
+.... .+..+.++..||.++...|+|++|+..|++++.+.. ..+.+|++||.+|...|++++|+.+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (330)
T 3hym_B 225 AIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP--------QNASTYSAIGYIHSLMGNFENAVDYFHTA 296 (330)
T ss_dssp TTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCSHHHHHHHHHHHHHTCHHHHHHHHHTT
T ss_pred hccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc--------cchHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 65442 245678999999999999999999999999998843 23588999999999999999999999999
Q ss_pred HHHHH
Q 017388 302 ISVCK 306 (372)
Q Consensus 302 l~i~~ 306 (372)
+.+..
T Consensus 297 l~~~p 301 (330)
T 3hym_B 297 LGLRR 301 (330)
T ss_dssp TTTCS
T ss_pred HccCC
Confidence 97753
No 79
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.21 E-value=5.5e-10 Score=98.74 Aligned_cols=166 Identities=13% Similarity=0.109 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~ 143 (372)
+..+..+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..++.+... +-...+.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-------- 120 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL--------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA-------- 120 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------
Confidence 567889999999999999999999999988 5778899999999999887653321 1000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.+... ..- -..+...-..++++.|..+++.++.+
T Consensus 121 ----------~~~~~------~~~----------------------------~~~a~~~~~~~~~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 121 ----------GMENG------DLF----------------------------YMLGTVLVKLEQPKLALPYLQRAVEL-- 154 (243)
T ss_dssp ----------TCCSH------HHH----------------------------HHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred ----------CCCCH------HHH----------------------------HHHHHHHHHhccHHHHHHHHHHHHHh--
Confidence 00000 000 00000011234667776666666654
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.+....++..+|.++...|+|++|+..|++++.+.. ..+.+++.||.+|...|++++|+.+|++++.
T Consensus 155 -----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 221 (243)
T 2q7f_A 155 -----NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP--------GHADAFYNAGVTYAYKENREKALEMLDKAID 221 (243)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred -----CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHc
Confidence 234577899999999999999999999999998732 2357899999999999999999999999988
Q ss_pred HHH
Q 017388 304 VCK 306 (372)
Q Consensus 304 i~~ 306 (372)
+..
T Consensus 222 ~~p 224 (243)
T 2q7f_A 222 IQP 224 (243)
T ss_dssp HCT
T ss_pred cCc
Confidence 743
No 80
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.21 E-value=2.9e-10 Score=96.65 Aligned_cols=114 Identities=16% Similarity=0.132 Sum_probs=90.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCC----------ChhHHHHHHHHHHHHHHhhhhhcCc
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGEL----------ALECVNAYYQYGRALLYKAQEEADP 128 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~----------~pe~A~~y~~yG~ALl~~ar~es~v 128 (372)
++..+..+..|..+|..++..|+|.+|+.+|.+|+.+........ .|..+.+|+++|.+++.+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------- 76 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI------- 76 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 345567899999999999999999999999999999966543211 567788999999988866
Q ss_pred ccCCCCccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChH
Q 017388 129 LVSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDL 208 (372)
Q Consensus 129 Lg~~~~~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl 208 (372)
+++
T Consensus 77 -----------------------------------------------------------------------------~~~ 79 (162)
T 3rkv_A 77 -----------------------------------------------------------------------------GDL 79 (162)
T ss_dssp -----------------------------------------------------------------------------TCH
T ss_pred -----------------------------------------------------------------------------CcH
Confidence 256
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 209 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 209 ~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
..|...++.|+.+ .+..+.+|+.+|.++...|+|++|+.+|+++|.+.
T Consensus 80 ~~A~~~~~~al~~-------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 80 HEAEETSSEVLKR-------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 6677777776665 35568899999999999999999999999999884
No 81
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.21 E-value=4.8e-10 Score=100.34 Aligned_cols=167 Identities=11% Similarity=0.010 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
+..+..+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..++.+.+.-- .... . +
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~--~- 135 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALAS--------DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ----D--T- 135 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----C--T-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh----C--c-
Confidence 456788999999999999999999999998 577889999999999988765432110 0000 0 0
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.. +..... . -..+...-..++++.|...|+.+..+
T Consensus 136 ------------~~------~~~~~~--------~-----------------~~la~~~~~~g~~~~A~~~~~~~~~~-- 170 (252)
T 2ho1_A 136 ------------LY------PERSRV--------F-----------------ENLGLVSLQMKKPAQAKEYFEKSLRL-- 170 (252)
T ss_dssp ------------TC------TTHHHH--------H-----------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ------------cC------cccHHH--------H-----------------HHHHHHHHHcCCHHHHHHHHHHHHhc--
Confidence 00 000000 0 00000011124566666655555443
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.+....++..||.++...|+|++|+..|++++.+. +....+++.++.+|...|++++|+.+|++++.
T Consensus 171 -----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~ 237 (252)
T 2ho1_A 171 -----NRNQPSVALEMADLLYKEREYVPARQYYDLFAQGG--------GQNARSLLLGIRLAKVFEDRDTAASYGLQLKR 237 (252)
T ss_dssp -----CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS--------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999998742 23357899999999999999999999999987
Q ss_pred HH
Q 017388 304 VC 305 (372)
Q Consensus 304 i~ 305 (372)
+.
T Consensus 238 ~~ 239 (252)
T 2ho1_A 238 LY 239 (252)
T ss_dssp HC
T ss_pred HC
Confidence 64
No 82
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.20 E-value=6.7e-10 Score=106.10 Aligned_cols=153 Identities=7% Similarity=0.007 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..++.+|..++..|+|++|..+|.+|+.+... .|. ....+.+++.+|.+++..
T Consensus 51 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~la~~~~~~---------------------- 106 (373)
T 1hz4_A 51 SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ-HDV-WHYALWSLIQQSEILFAQ---------------------- 106 (373)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-cCc-HHHHHHHHHHHHHHHHHC----------------------
Confidence 35667889999999999999999999999998655 333 234567778888887744
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.++.++.
T Consensus 107 --------------------------------------------------------------G~~~~A~~~~~~al~~~~ 124 (373)
T 1hz4_A 107 --------------------------------------------------------------GFLQTAWETQEKAFQLIN 124 (373)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 378889999999999998
Q ss_pred HhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 224 k~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
+.... .+..+.++.+||.++...|+|++|+..|+++|.+.+..- ++..+.+|+.||.++...|++++|+.+|++++
T Consensus 125 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~ 201 (373)
T 1hz4_A 125 EQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ---PQQQLQCLAMLIQCSLARGDLDNARSQLNRLE 201 (373)
T ss_dssp HTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC---GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 76543 366889999999999999999999999999999987642 23367899999999999999999999999999
Q ss_pred HHH
Q 017388 303 SVC 305 (372)
Q Consensus 303 ~i~ 305 (372)
.+.
T Consensus 202 ~~~ 204 (373)
T 1hz4_A 202 NLL 204 (373)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 83
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.20 E-value=7.3e-10 Score=97.94 Aligned_cols=167 Identities=19% Similarity=0.166 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~ 142 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..++.+.++-- .....
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 86 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFYDKALEL------- 86 (243)
T ss_dssp --------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-------
Confidence 4778999999999999999999999999985 678899999999999988765432110 00000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
.+... ..-- ..+...-..++++.|...++.++.+.
T Consensus 87 -----------~~~~~------~~~~----------------------------~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 87 -----------DSSAA------TAYY----------------------------GAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp -----------CTTCH------HHHH----------------------------HHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred -----------CCcch------HHHH----------------------------HHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 00000 0000 00000112346666666666665542
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
+....++..+|.++...|+|++|+..|++++.+.. ....+++.+|.+|...|++++|+.+|++++
T Consensus 122 -------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 186 (243)
T 2q7f_A 122 -------MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE--------NDTEARFQFGMCLANEGMLDEALSQFAAVT 186 (243)
T ss_dssp -------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999998743 235789999999999999999999999999
Q ss_pred HHHH
Q 017388 303 SVCK 306 (372)
Q Consensus 303 ~i~~ 306 (372)
.+..
T Consensus 187 ~~~~ 190 (243)
T 2q7f_A 187 EQDP 190 (243)
T ss_dssp HHCT
T ss_pred HhCc
Confidence 8743
No 84
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.20 E-value=1.1e-10 Score=115.62 Aligned_cols=153 Identities=5% Similarity=-0.056 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 66 ADELMEKGTNALKESD-YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 66 a~~L~~~G~~~~~~gd-y~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
+..++.+|..++.+|+ |++|+.+|.+|+++ .|..+.+|+++|.+|..+++.+.++--. .
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l--------~P~~~~a~~~~g~~~~~~g~~~eAl~~~--~---------- 190 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE--------QPKNYQVWHHRRVLVEWLRDPSQELEFI--A---------- 190 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCTTHHHHH--H----------
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHccCHHHHHHHH--H----------
Confidence 5567899999999997 99999999999998 7999999999999999886553221000 0
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH----------
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM---------- 214 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~---------- 214 (372)
++.. ..++...||-.
T Consensus 191 -----------------------kal~--------------------------------ldP~~~~a~~~lg~~~~~~g~ 215 (382)
T 2h6f_A 191 -----------------------DILN--------------------------------QDAKNYHAWQHRQWVIQEFKL 215 (382)
T ss_dssp -----------------------HHHH--------------------------------HCTTCHHHHHHHHHHHHHHTC
T ss_pred -----------------------HHHH--------------------------------hCccCHHHHHHHHHHHHHcCC
Confidence 0000 00111112221
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHh-cCCHHHH-----HHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALE-REDIETS-----LSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 288 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e-~~~y~~A-----l~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~ 288 (372)
++.|+..|.+.+...+..+.+|+++|.++.. .+.+++| +.+|++||.+.. .-+.+|++||.+|...
T Consensus 216 ~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P--------~~~~a~~~l~~ll~~~ 287 (382)
T 2h6f_A 216 WDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVP--------HNESAWNYLKGILQDR 287 (382)
T ss_dssp CTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHcc
Confidence 2344555555554457789999999999999 5555888 589999999753 3469999999999997
Q ss_pred CCchHHHHHHHHHHHHHH
Q 017388 289 SKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 289 ~~~~eAi~~~ekAl~i~~ 306 (372)
|. ..|.+|+..++
T Consensus 288 g~-----~~~~~a~~~~~ 300 (382)
T 2h6f_A 288 GL-----SKYPNLLNQLL 300 (382)
T ss_dssp CG-----GGCHHHHHHHH
T ss_pred Cc-----cchHHHHHHHH
Confidence 74 34566766654
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.19 E-value=1.8e-10 Score=98.13 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...|+.+..+ .+.-+.+|..||.++...|+|++|+..|++++.+.+ ++ +.+|++||.+|.
T Consensus 36 ~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-----~~---~~~~~~lg~~~~ 100 (148)
T 2vgx_A 36 XYEDAHXVFQALCVL-------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI-----XE---PRFPFHAAECLL 100 (148)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC---THHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHc-------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CC---chHHHHHHHHHH
Confidence 566777777666544 345688999999999999999999999999999853 22 478999999999
Q ss_pred hCCCchHHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~~ 306 (372)
..|++++|+.+|++++.+..
T Consensus 101 ~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 101 QXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHHCc
Confidence 99999999999999998853
No 86
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.16 E-value=3e-10 Score=111.36 Aligned_cols=155 Identities=15% Similarity=0.029 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
...+..+|..++..|+|++|+.+|.+|+++ +|..+.+|+.+|.++...+........
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~y~~~~~~~~~~~~--------------- 303 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEY--------IPNNAYLHCQIGCCYRAKVFQVMNLRE--------------- 303 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCChHHHHHHHHHHHHHHHHHhhhHHH---------------
Confidence 345678999999999999999999999988 799999999999988766433111000
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
........+...++.|..+|.+.
T Consensus 304 ---------------------------------------------------------~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 304 ---------------------------------------------------------NGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------HHHHHHHHHHhhHHHHHHHHHHH
Confidence 00123344445566666666665
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH-HHhCCCchHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC-LEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a-~~~~~~~~eAi~~~ekAl~i 304 (372)
....+..+.++..||.++...|+|++|+..|+++|.+. +.+.....+|+++|.. +...+++++|+.+|++||.+
T Consensus 327 ~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i 401 (472)
T 4g1t_A 327 DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKE-----LTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKI 401 (472)
T ss_dssp HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHS
T ss_pred hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcC-----CCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 55456677889999999999999999999999999863 2333445678888865 45678999999999999986
Q ss_pred H
Q 017388 305 C 305 (372)
Q Consensus 305 ~ 305 (372)
.
T Consensus 402 ~ 402 (472)
T 4g1t_A 402 N 402 (472)
T ss_dssp C
T ss_pred C
Confidence 3
No 87
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=1e-09 Score=98.74 Aligned_cols=193 Identities=10% Similarity=-0.020 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc------CCCCccCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV------SVPKKEGDS 139 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg------~~~~~~~e~ 139 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .+..|....+++++|.+++..++.+.++-. ..|..
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~---- 74 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH---- 74 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC----
Confidence 456788888888888888888888888875 233455667888888888887766443111 01110
Q ss_pred CCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 017388 140 QQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 219 (372)
Q Consensus 140 ~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar 219 (372)
+........ ....-...+... -... -..+....+.++++.|...|+.++
T Consensus 75 ---~~~~~a~~~----------~g~~~~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~A~~~~~~~l 123 (225)
T 2yhc_A 75 ---PNIDYVMYM----------RGLTNMALDDSA-LQGF-----------------FGVDRSDRDPQQARAAFSDFSKLV 123 (225)
T ss_dssp ---TTHHHHHHH----------HHHHHHHHHC--------------------------------CCHHHHHHHHHHHHHH
T ss_pred ---CcHHHHHHH----------HHHHHHhhhhhh-hhhh-----------------hccchhhcCcHHHHHHHHHHHHHH
Confidence 000000000 000000000000 0000 000000112346666666665554
Q ss_pred HHHHHhcCC----------CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCC
Q 017388 220 AIAEKHWGD----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS 289 (372)
Q Consensus 220 ~I~ek~~~~----------~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~ 289 (372)
..|-..... ...++..+..+|.++...|+|.+|+..|+++|.+. |+++....+++.||.+|...|
T Consensus 124 ~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g 198 (225)
T 2yhc_A 124 RGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALPLMENAYRQMQ 198 (225)
T ss_dssp TTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHHHHTT
T ss_pred HHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHHHHHHHHHHcC
Confidence 433111100 01234455789999999999999999999999885 356777899999999999999
Q ss_pred CchHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAIS 303 (372)
Q Consensus 290 ~~~eAi~~~ekAl~ 303 (372)
++++|+.+|++++.
T Consensus 199 ~~~~A~~~~~~l~~ 212 (225)
T 2yhc_A 199 MNAQAEKVAKIIAA 212 (225)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHh
Confidence 99999999876553
No 88
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.16 E-value=7.2e-10 Score=94.39 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..++.+|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+++.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~---------------------- 58 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSAS---------------------- 58 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT----------------------
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHc----------------------
Confidence 45788999999999999999999999999998 688899999999999965
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.|+.+.
T Consensus 59 --------------------------------------------------------------g~~~~A~~~~~~al~~~- 75 (164)
T 3sz7_A 59 --------------------------------------------------------------GQHEKAAEDAELATVVD- 75 (164)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHhC-
Confidence 25777877787777662
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~ 265 (372)
+..+.+|.+||.++..+|+|++|+.+|+++|.+...
T Consensus 76 ------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 76 ------PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN 111 (164)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS
T ss_pred ------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 446899999999999999999999999999998743
No 89
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.16 E-value=6e-10 Score=113.88 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..+..+|..++..|+|++|+.+|++|+++ .|..+.+|+.+|.+++.+
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~------------------------ 70 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGRVRWTQ------------------------ 70 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHC------------------------
Confidence 457889999999999999999999999997 688899999999999855
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|...|+.|+.+.
T Consensus 71 ------------------------------------------------------------g~~~~A~~~~~~al~~~--- 87 (568)
T 2vsy_A 71 ------------------------------------------------------------QRHAEAAVLLQQASDAA--- 87 (568)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHhcC---
Confidence 25777777787777652
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC---CCchHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG---SKPQEAIPYCQKAI 302 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~---~~~~eAi~~~ekAl 302 (372)
+..+.+|.+||.++...|+|++|+..|++++++.. ....++++||.+|... +++++|+.+|++++
T Consensus 88 ----p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 88 ----PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP--------EEPYITAQLLNWRRRLCDWRALDVLSAQVRAAV 155 (568)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 44588999999999999999999999999999843 3358999999999999 99999999999999
Q ss_pred HHH
Q 017388 303 SVC 305 (372)
Q Consensus 303 ~i~ 305 (372)
.+.
T Consensus 156 ~~~ 158 (568)
T 2vsy_A 156 AQG 158 (568)
T ss_dssp HHT
T ss_pred hcC
Confidence 874
No 90
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.15 E-value=1.5e-09 Score=100.66 Aligned_cols=137 Identities=19% Similarity=0.232 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~~a~~~~~~----------------------- 50 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAM----------------------- 50 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHc-----------------------
Confidence 3567899999999999999999999999997 688889999999999966
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.++.+
T Consensus 51 -------------------------------------------------------------~~~~~A~~~~~~~~~~--- 66 (359)
T 3ieg_A 51 -------------------------------------------------------------GKSKAALPDLTKVIAL--- 66 (359)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHh---
Confidence 2567777777777655
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH------------HHHHHhCCCch
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRI------------CLCLEIGSKPQ 292 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~L------------g~a~~~~~~~~ 292 (372)
.+....+|..+|.++...|+|++|+..|++++.+.+ .......+++.+ |.+|...++++
T Consensus 67 ----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 137 (359)
T 3ieg_A 67 ----KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP-----SEQEEKEAESQLVKADEMQRLRSQALDAFDGADYT 137 (359)
T ss_dssp ----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ----CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC-----cccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 244568999999999999999999999999997633 000233444444 89999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 293 EAIPYCQKAISVC 305 (372)
Q Consensus 293 eAi~~~ekAl~i~ 305 (372)
+|+.+|++++.+.
T Consensus 138 ~A~~~~~~~~~~~ 150 (359)
T 3ieg_A 138 AAITFLDKILEVC 150 (359)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.15 E-value=1.6e-09 Score=99.59 Aligned_cols=85 Identities=15% Similarity=0.261 Sum_probs=46.1
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a 284 (372)
.++++.|...++.++.+ .+..+.++..||.++...|+|++|+..|++++.+. |..+.+++.+|.+
T Consensus 151 ~~~~~~A~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~ 215 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEM-------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELR--------PDDAQLWNKLGAT 215 (327)
T ss_dssp HHHHHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhh-------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------CCcHHHHHHHHHH
Confidence 34556665555554432 12234556666666666666666666666665542 1123455556666
Q ss_pred HHhCCCchHHHHHHHHHHHH
Q 017388 285 LEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i 304 (372)
|...|++++|+.+|++++.+
T Consensus 216 ~~~~~~~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 216 LANGNRPQEALDAYNRALDI 235 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHc
Confidence 66666666666666555544
No 92
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.15 E-value=2.3e-09 Score=84.89 Aligned_cols=124 Identities=12% Similarity=0.080 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~ 141 (372)
....+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~-------------------- 59 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKL-------------------- 59 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT--------------------
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHh--------------------
Confidence 3456788999999999999999999999999997 577789999999998854
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
+++..|...++.+..+
T Consensus 60 ----------------------------------------------------------------~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 60 ----------------------------------------------------------------GNYAGAVQDCERAICI 75 (131)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------hchHHHHHHHHHHHhc
Confidence 2566777777777654
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCch
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 292 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~ 292 (372)
.+....++..+|.++...|+|++|+..|++++.+.. ....+++.+|.++...++++
T Consensus 76 -------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p--------~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 76 -------DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP--------DNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHHHHTTCC
T ss_pred -------CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc--------cchHHHHHHHHHHHHHhcCC
Confidence 234578999999999999999999999999998842 23578999999999888763
No 93
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.13 E-value=1.3e-09 Score=107.97 Aligned_cols=59 Identities=15% Similarity=0.267 Sum_probs=51.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhh
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEE 125 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~e 125 (372)
+......+..|+.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++.+++.+
T Consensus 18 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~ 76 (537)
T 3fp2_A 18 PSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL--------DPNEPVFYSNISACYISTGDLE 76 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHH
T ss_pred cchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh--------CCCCcHHHHHHHHHHHHcCCHH
Confidence 4444567899999999999999999999999999998 6888999999999999887654
No 94
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.13 E-value=1.8e-09 Score=108.83 Aligned_cols=173 Identities=12% Similarity=0.058 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~ 143 (372)
...+..+|..+...|+|++|+.+|.+++.+ .|....+|+.+|.++...++.+.+. |-.....
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-------- 470 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYAL-------- 470 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 557889999999999999999999999976 4677889999999999887654321 1000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.+... ..- -......-..++++.|+.+|+.++.++.
T Consensus 471 ----------~~~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 471 ----------FQYDP------LLL----------------------------NELGVVAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp ----------CCCCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCh------HHH----------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 00000 000 0000011124688999999999988876
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+........+.+|..||.++...|+|++|+..|++++.+. |..+.+|+.||.+|...|++++|+.+|++++.
T Consensus 507 ~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 507 KTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS--------TNDANVHTAIALVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 6433333358999999999999999999999999999884 22358999999999999999999999999998
Q ss_pred HHH
Q 017388 304 VCK 306 (372)
Q Consensus 304 i~~ 306 (372)
+..
T Consensus 579 ~~p 581 (597)
T 2xpi_A 579 ISP 581 (597)
T ss_dssp HCT
T ss_pred cCC
Confidence 743
No 95
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.12 E-value=7.3e-10 Score=97.26 Aligned_cols=39 Identities=26% Similarity=0.360 Sum_probs=34.6
Q ss_pred chhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017388 58 EREKTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (372)
Q Consensus 58 ~~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~ 96 (372)
........+..+..+|..++..|+|++|+.+|.+|+.+.
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 68 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFF 68 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 455667789999999999999999999999999999873
No 96
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.12 E-value=2.3e-09 Score=87.47 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...+..|+.++.+.. .....+.++..||.++...|+|++|+..|++++.+.+... +.+..+.+++++|.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~ 99 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFG-DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK--DRAVEAQSCYSLGNTY 99 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHH
Confidence 368889999999999988753 3456789999999999999999999999999999998763 4566799999999999
Q ss_pred HhCCCchHHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
...+++++|+.+|++++.+.+.
T Consensus 100 ~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 100 TLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998754
No 97
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.12 E-value=1.7e-09 Score=98.84 Aligned_cols=162 Identities=14% Similarity=0.146 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHH----hhhhhcCcccCCCCccCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLY----KAQEEADPLVSVPKKEGDSQQ 141 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~----~ar~es~vLg~~~~~~~e~~~ 141 (372)
+..++.+|..++..|+|++|+.+|.+|++ |....+++.+|.+++. .++.+.++--
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----------~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~----------- 64 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD----------LKENSGCFNLGVLYYQGQGVEKNLKKAASF----------- 64 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHH-----------
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHcCCCcCCCHHHHHHH-----------
Confidence 55788999999999999999999999998 3445789999999886 3221110000
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
............. ..... .. .....-.+++..|+..|+.|...
T Consensus 65 -------~~~a~~~~~~~a~--~~lg~---~~-------------------------~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 65 -------YAKACDLNYSNGC--HLLGN---LY-------------------------YSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp -------HHHHHHTTCHHHH--HHHHH---HH-------------------------HHTSSSCCCHHHHHHHHHHHHHT
T ss_pred -------HHHHHHCCCHHHH--HHHHH---HH-------------------------hCCCCcccCHHHHHHHHHHHHHc
Confidence 0000000000000 00000 00 00000135777887777777643
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----CCCchH
Q 017388 222 AEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GSKPQE 293 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~----~~~~~e 293 (372)
..+.++.+||.++.. .++|++|+..|++++.+. .+.++++||.+|.. .+++++
T Consensus 108 ---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~~~~~~~~~~~ 168 (273)
T 1ouv_A 108 ---------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN----------DGDGCTILGSLYDAGRGTPKDLKK 168 (273)
T ss_dssp ---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred ---------CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC----------cHHHHHHHHHHHHcCCCCCCCHHH
Confidence 257899999999999 999999999999999852 25789999999998 899999
Q ss_pred HHHHHHHHHHH
Q 017388 294 AIPYCQKAISV 304 (372)
Q Consensus 294 Ai~~~ekAl~i 304 (372)
|+.+|++|+..
T Consensus 169 A~~~~~~a~~~ 179 (273)
T 1ouv_A 169 ALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 99999999876
No 98
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.10 E-value=9.6e-10 Score=87.98 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
....++.+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~----------------------- 63 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKL----------------------- 63 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTT-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHh-----------------------
Confidence 4678899999999999999999999999986 577789999999988743
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|+..++.++.+.
T Consensus 64 -------------------------------------------------------------~~~~~A~~~~~~a~~~~-- 80 (133)
T 2lni_A 64 -------------------------------------------------------------LEFQLALKDCEECIQLE-- 80 (133)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHHhC--
Confidence 36777888888777652
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~ 290 (372)
+..+.++..+|.++...|+|++|+..|++++.+... ...+++.|+.+|...++
T Consensus 81 -----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~--------~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 81 -----PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS--------CKEAADGYQRCMMAQYN 133 (133)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG--------GTHHHHHHHHHHHHHTC
T ss_pred -----CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--------chHHHHHHHHHHHHhcC
Confidence 345789999999999999999999999999988433 35788999999876653
No 99
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.10 E-value=9.6e-11 Score=123.87 Aligned_cols=130 Identities=14% Similarity=0.007 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCc
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d 146 (372)
..++.+|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.++
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g------------------------ 481 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYRAVAELLTG------------------------ 481 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHHHHHHHHHT------------------------
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHHHHHHHHcC------------------------
Confidence 46788999999999999999999999998 5899999999999999763
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 017388 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (372)
Q Consensus 147 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~ 226 (372)
+++.|...|+.|+.+
T Consensus 482 ------------------------------------------------------------~~~~A~~~~~~al~l----- 496 (681)
T 2pzi_A 482 ------------------------------------------------------------DYDSATKHFTEVLDT----- 496 (681)
T ss_dssp ------------------------------------------------------------CHHHHHHHHHHHHHH-----
T ss_pred ------------------------------------------------------------CHHHHHHHHHHHHHh-----
Confidence 455555555555543
Q ss_pred CCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 227 ~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
.+..+.+|.+||.++...|+|++ +.+|+++|++.. ..+.+|++||.+|...|++++|+.+|++|+.+
T Consensus 497 --~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P--------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 563 (681)
T 2pzi_A 497 --FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTND--------GVISAAFGLARARSAEGDRVGAVRTLDEVPPT 563 (681)
T ss_dssp --STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTT
T ss_pred --CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC--------chHHHHHHHHHHHHHcCCHHHHHHHHHhhccc
Confidence 23446677777777777777777 777777777632 23467777777777777777777777776643
No 100
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.10 E-value=9.6e-10 Score=99.00 Aligned_cols=127 Identities=11% Similarity=-0.003 Sum_probs=100.4
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCC
Q 017388 76 ALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNG 155 (372)
Q Consensus 76 ~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~ 155 (372)
....|+|++|+.+|.+++++ .....|..+.+|+.+|.+++..
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------------------- 56 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSL---------------------------------- 56 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHT----------------------------------
T ss_pred cCccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHc----------------------------------
Confidence 34568999999999999886 2234578999999999999965
Q ss_pred CCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCccHHHH
Q 017388 156 ESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDI 235 (372)
Q Consensus 156 e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~ 235 (372)
++++.|...++.++.+ .+..+.+
T Consensus 57 --------------------------------------------------~~~~~A~~~~~~al~~-------~~~~~~~ 79 (275)
T 1xnf_A 57 --------------------------------------------------GLRALARNDFSQALAI-------RPDMPEV 79 (275)
T ss_dssp --------------------------------------------------TCHHHHHHHHHHHHHH-------CCCCHHH
T ss_pred --------------------------------------------------ccHHHHHHHHHHHHHc-------CCCcHHH
Confidence 2566676667666654 2446788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 236 ~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
|..||.++...|+|++|+..|++++.+.+ ..+.+|++||.+|...|++++|+.+|++++.+.
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~--------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDP--------TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCc--------cccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 89999999999999999999999988732 224788899999999999999999999988754
No 101
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.1e-09 Score=105.44 Aligned_cols=173 Identities=17% Similarity=0.160 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCCC
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGSD 144 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~~ 144 (372)
..+..+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..++.+... +-...+.
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------- 367 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKEL--------DPENIFPYIQLACLAYRENKFDDCETLFSEAKRK--------- 367 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHT--------CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---------
Confidence 46788999999999999999999999987 5677789999999999887654321 1000000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
.+... ..- -..+...-..++++.|...++.+..+...
T Consensus 368 ---------~~~~~------~~~----------------------------~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 404 (514)
T 2gw1_A 368 ---------FPEAP------EVP----------------------------NFFAEILTDKNDFDKALKQYDLAIELENK 404 (514)
T ss_dssp ---------STTCS------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred ---------cccCH------HHH----------------------------HHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 00000 000 00000111235788888888888877654
Q ss_pred hcCCCccHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALE---REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e---~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
... ....+.++..+|.++.. .|+|++|+..|++++.+. |....+|+.||.+|...|++++|+.+|+++
T Consensus 405 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 475 (514)
T 2gw1_A 405 LDG-IYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD--------PRSEQAKIGLAQMKLQQEDIDEAITLFEES 475 (514)
T ss_dssp SSS-CSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cch-HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 422 12336699999999999 999999999999999873 233588999999999999999999999999
Q ss_pred HHHHHHH
Q 017388 302 ISVCKSR 308 (372)
Q Consensus 302 l~i~~~r 308 (372)
+.+....
T Consensus 476 ~~~~~~~ 482 (514)
T 2gw1_A 476 ADLARTM 482 (514)
T ss_dssp HHHCSSH
T ss_pred HHhcccc
Confidence 9986543
No 102
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.09 E-value=1.8e-09 Score=95.09 Aligned_cols=100 Identities=19% Similarity=0.121 Sum_probs=79.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC-----CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH--
Q 017388 206 SDLDLAWKMLDVARAIAEKHWG-----DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELN-- 278 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~-----~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~-- 278 (372)
++|+.|...|+.|+.+--.... ..+..+.+|.++|.++..+|+|++|+.+|.+||.|+.... +-+|.-+.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~-e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG-ELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC-CTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc-cCCCchHHHHHH
Confidence 3677788888888877544211 1123456999999999999999999999999999954443 2344567888
Q ss_pred --HHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 279 --FRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 279 --~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
|++|.+|..+|+|++|+.+|++||++-.
T Consensus 104 ~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 104 AVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999843
No 103
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.09 E-value=2.3e-09 Score=99.43 Aligned_cols=88 Identities=10% Similarity=-0.095 Sum_probs=72.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...++.++.+. +........++..+|.++...|+|++|+..|++++.+. |..+.+|+.+|.+|
T Consensus 248 ~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 248 GRYTDATSKYESVMKTE---PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME--------PDNVNALKDRAEAY 316 (359)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 57788888777776653 22223355779999999999999999999999999972 33368999999999
Q ss_pred HhCCCchHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i 304 (372)
...|++++|+.+|++++.+
T Consensus 317 ~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHhc
Confidence 9999999999999999976
No 104
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.09 E-value=9e-10 Score=93.67 Aligned_cols=119 Identities=10% Similarity=0.042 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+|+++ .|..+.+|+.+|.++..+
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~----------------------- 78 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRFLGLLYELE----------------------- 78 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc-----------------------
Confidence 4556789999999999999999999999999 799999999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...|+.|+.+
T Consensus 79 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 94 (150)
T 4ga2_A 79 -------------------------------------------------------------ENTDKAVECYRRSVEL--- 94 (150)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------CchHHHHHHHHHHHHh---
Confidence 2566777777777655
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDY-QKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y-~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~ 290 (372)
.|....+|.+||.++...++|++|+..| ++|+++.+ ++ +.+|..++.++...|+
T Consensus 95 ----~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P-----~~---~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 95 ----NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP-----GS---PAVYKLKEQLLDCEGE 149 (150)
T ss_dssp ----CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHTCCC
T ss_pred ----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc-----CC---HHHHHHHHHHHHHhCc
Confidence 3567899999999999999999888765 89999853 33 3678888888888775
No 105
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.09 E-value=1.1e-09 Score=91.42 Aligned_cols=85 Identities=13% Similarity=0.052 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|..+|+.+..+ .+.-+.+|..||.++...|+|++|+..|++++.+.+ ++ ..+|++||.+|.
T Consensus 33 ~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~---~~~~~~lg~~~~ 97 (142)
T 2xcb_A 33 KWDDAQKIFQALCML-------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-----NE---PRFPFHAAECHL 97 (142)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---THHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CC---cHHHHHHHHHHH
Confidence 566676666665543 355688999999999999999999999999999853 23 478999999999
Q ss_pred hCCCchHHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~~ 306 (372)
..|++++|+.+|++++.+..
T Consensus 98 ~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 98 QLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCC
Confidence 99999999999999998865
No 106
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.09 E-value=4.1e-09 Score=89.60 Aligned_cols=98 Identities=16% Similarity=0.034 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...|+.|+.+. +..+.+|.+||.+++..|+|++|+.+|+++|.+.. ..+.+|++||.+|.
T Consensus 26 ~~~~A~~~~~~al~~~-------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 26 EYSKAIDLYTQALSIA-------PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDP--------KYSKAWSRLGLARF 90 (164)
T ss_dssp CHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHH
Confidence 6777777777776653 45689999999999999999999999999999853 33689999999999
Q ss_pred hCCCchHHHHHHHHHHHHH--------HHHHHHHHHHHHhh
Q 017388 287 IGSKPQEAIPYCQKAISVC--------KSRVQRLLNEVKSL 319 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~--------~~rl~~l~~~~~~~ 319 (372)
..+++++|+.+|++++.+. ...+..++.++...
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 44566666666554
No 107
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.08 E-value=1.3e-10 Score=99.75 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=103.4
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCcccc
Q 017388 70 MEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSV 149 (372)
Q Consensus 70 ~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~ 149 (372)
+..+..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~---------------------------- 57 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKIRA--------NPQNSEQWALLGEYYLWQ---------------------------- 57 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHHHH--------CCSCHHHHHHHHHHHHHT----------------------------
T ss_pred hhhhhhhhhccCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc----------------------------
Confidence 33445567789999999999999998 688899999999999854
Q ss_pred ccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCC
Q 017388 150 KNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDS 229 (372)
Q Consensus 150 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~ 229 (372)
+++..|...|+.++.+.
T Consensus 58 --------------------------------------------------------~~~~~A~~~~~~al~~~------- 74 (177)
T 2e2e_A 58 --------------------------------------------------------NDYSNSLLAYRQALQLR------- 74 (177)
T ss_dssp --------------------------------------------------------TCHHHHHHHHHHHHHHH-------
T ss_pred --------------------------------------------------------CCHHHHHHHHHHHHHcC-------
Confidence 26777888888877664
Q ss_pred ccHHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEV-ALEREDI--ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 230 ~~~A~~~~~LGev-~~e~~~y--~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
+....++..+|.+ +...|+| ++|+..|++++.+.. ....+++.||.+|...|++++|+.+|++++.+
T Consensus 75 p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 75 GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDS--------NEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 2347899999999 8899999 999999999999742 23588999999999999999999999999875
No 108
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.08 E-value=1.8e-09 Score=91.71 Aligned_cols=92 Identities=12% Similarity=-0.000 Sum_probs=78.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC---C--------CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWG---D--------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI 274 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~---~--------~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~i 274 (372)
++++.|...|..|+.++..... + .+..+.+|.+||.+++..|+|+.|+.+|+++|.+. |..
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~--------p~~ 96 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE--------ETN 96 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------TTC
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC--------Ccc
Confidence 4788888888888888655321 0 34578999999999999999999999999999983 344
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 275 Ae~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+.+|+++|.+|...|+|++|+.+|++++.+.
T Consensus 97 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 97 EKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999763
No 109
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.07 E-value=2.7e-09 Score=84.63 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+++.+|.+++..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~----------------------- 51 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEK----------------------- 51 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHh-----------------------
Confidence 4678899999999999999999999999998 577789999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.+..+...
T Consensus 52 -------------------------------------------------------------~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 52 -------------------------------------------------------------GDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHhhccc
Confidence 2677888889988888765
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~ 287 (372)
........+.++..+|.++...|+|++|+..|++++.+. + + ...+..|+.++..
T Consensus 71 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~-~---~~~~~~l~~~~~~ 124 (131)
T 1elr_A 71 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH-----R-T---PDVLKKCQQAEKI 124 (131)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----C-C---HHHHHHHHHHHHH
Confidence 544444558999999999999999999999999999863 2 2 3556666666554
No 110
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2.8e-09 Score=86.38 Aligned_cols=85 Identities=14% Similarity=-0.023 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...|+.|+.+ .+..+.+|.++|.++...|+|++|+.+|+++|.+.. ..+.+|+++|.+|.
T Consensus 19 ~~~~A~~~~~~al~~-------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 19 DWPNAVKAYTEMIKR-------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP--------NFVRAYIRKATAQI 83 (126)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHH
Confidence 677777777777665 244689999999999999999999999999999843 33689999999999
Q ss_pred hCCCchHHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~~ 306 (372)
..|++++|+.+|++++.+..
T Consensus 84 ~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhCc
Confidence 99999999999999999863
No 111
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.07 E-value=6e-09 Score=105.00 Aligned_cols=172 Identities=14% Similarity=0.147 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~ 143 (372)
+..+..+|..+...|+|++|+.+|.+++++ .|....+|+.+|.++...++.+.++ +-.....
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-------- 436 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL-------- 436 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 456677888999999999999999999886 5777888999999998887654331 1000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.+... ..- -.........++++.|+.+|+.++.+
T Consensus 437 ----------~~~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~-- 470 (597)
T 2xpi_A 437 ----------FQGTH------LPY----------------------------LFLGMQHMQLGNILLANEYLQSSYAL-- 470 (597)
T ss_dssp ----------TTTCS------HHH----------------------------HHHHHHHHHHTCHHHHHHHHHHHHHH--
T ss_pred ----------Cccch------HHH----------------------------HHHHHHHHHcCCHHHHHHHHHHHHHh--
Confidence 00000 000 00000011224566666666666543
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.+....+|..||.++...|+|++|+..|++++.+.+.. +.+....+.+|+.||.+|...|++++|+.+|++++.
T Consensus 471 -----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 544 (597)
T 2xpi_A 471 -----FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKT-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLL 544 (597)
T ss_dssp -----CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 23456889999999999999999999999999998764 223333589999999999999999999999999997
Q ss_pred HH
Q 017388 304 VC 305 (372)
Q Consensus 304 i~ 305 (372)
+.
T Consensus 545 ~~ 546 (597)
T 2xpi_A 545 LS 546 (597)
T ss_dssp HS
T ss_pred hC
Confidence 64
No 112
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.06 E-value=2.1e-09 Score=92.91 Aligned_cols=100 Identities=11% Similarity=0.043 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+|+.+
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~----------------------- 83 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIK----------------------- 83 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHH-----------------------
Confidence 4678999999999999999999999999999 799999999999999966
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...|+.|..+
T Consensus 84 -------------------------------------------------------------g~~~~Ai~~~~~al~l--- 99 (151)
T 3gyz_A 84 -------------------------------------------------------------EQFQQAADLYAVAFAL--- 99 (151)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHhh---
Confidence 2567777777777765
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
.|..+.+|++||.++...|+|++|+..|+++|.+.
T Consensus 100 ----~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 100 ----GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp ----SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 24567899999999999999999999999999985
No 113
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.06 E-value=5.3e-09 Score=101.31 Aligned_cols=155 Identities=11% Similarity=0.051 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
.....|..+|..|...|+|++|.++|.+++.++... +. +...+.++..+|..+.
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~------------------------ 106 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF-AK-SKTVKVLKTLIEKFEQ------------------------ 106 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS-CH-HHHHHHHHHHHHHHCS------------------------
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-cc-hHHHHHHHHHHHHHHh------------------------
Confidence 445678999999999999999999999999986432 11 1222233333332211
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
..++++.|..++..+..++.
T Consensus 107 ------------------------------------------------------------~~~~~~~a~~~~~~~~~~~~ 126 (434)
T 4b4t_Q 107 ------------------------------------------------------------VPDSLDDQIFVCEKSIEFAK 126 (434)
T ss_dssp ------------------------------------------------------------CCSCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------CCCCHHHHHHHHHHHHHHHH
Confidence 01468889999999999987
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.. .....+.++.+||.++.+.|+|.+|+..|++++.+..... +++..+++|..+|.+|...++|++|..+|++|+.
T Consensus 127 ~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 127 REK-RVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD--DKPSLVDVHLLESKVYHKLRNLAKSKASLTAART 203 (434)
T ss_dssp HSS-CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS--CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhC-ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 764 3466899999999999999999999999999998887653 6788999999999999999999999999999998
Q ss_pred HHHH
Q 017388 304 VCKS 307 (372)
Q Consensus 304 i~~~ 307 (372)
+...
T Consensus 204 ~~~~ 207 (434)
T 4b4t_Q 204 AANS 207 (434)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8643
No 114
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.05 E-value=4.7e-09 Score=101.76 Aligned_cols=88 Identities=10% Similarity=-0.093 Sum_probs=72.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|+..|+.++.+. +........+|..+|.++...|+|++|+..|++++.+. |..+.+|+.||.+|
T Consensus 271 g~~~~A~~~~~~~l~~~---p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~--------p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 271 GRYTDATSKYESVMKTE---PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME--------PDNVNALKDRAEAY 339 (450)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 46778888888777643 22222347799999999999999999999999999883 33468999999999
Q ss_pred HhCCCchHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i 304 (372)
...|++++|+.+|++++.+
T Consensus 340 ~~~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHhcCHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 115
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.04 E-value=1.1e-08 Score=99.09 Aligned_cols=166 Identities=18% Similarity=0.134 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~ 142 (372)
.+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+.+|.+++.+++.+.+.-- .+.+.
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------- 89 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQL------- 89 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-------
Confidence 4778999999999999999999999999987 688899999999999988765432110 00000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
++... ..- -..+...-..++++.|...|+.+
T Consensus 90 -----------~p~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~~---- 120 (450)
T 2y4t_A 90 -----------KMDFT------AAR----------------------------LQRGHLLLKQGKLDEAEDDFKKV---- 120 (450)
T ss_dssp -----------CTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHH----
T ss_pred -----------CCCcH------HHH----------------------------HHHHHHHHHcCCHHHHHHHHHHH----
Confidence 00000 000 00000001123445554444444
Q ss_pred HHhcCCCccHH---HH------------HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017388 223 EKHWGDSMEKV---DI------------LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (372)
Q Consensus 223 ek~~~~~~~~A---~~------------~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~ 287 (372)
....+... .+ +..+|.++...|+|++|+..|++++.+.. ..+.+++.||.+|..
T Consensus 121 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~~~~ 189 (450)
T 2y4t_A 121 ---LKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV--------WDAELRELRAECFIK 189 (450)
T ss_dssp ---HTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHH
T ss_pred ---HhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CChHHHHHHHHHHHH
Confidence 33333333 44 44557789999999999999999998632 234677888888888
Q ss_pred CCCchHHHHHHHHHHHHH
Q 017388 288 GSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 288 ~~~~~eAi~~~ekAl~i~ 305 (372)
.|++++|+.+|++++.+.
T Consensus 190 ~g~~~~A~~~~~~~~~~~ 207 (450)
T 2y4t_A 190 EGEPRKAISDLKAASKLK 207 (450)
T ss_dssp TTCGGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 888888888888877653
No 116
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.04 E-value=2.4e-09 Score=107.78 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=108.5
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-------CCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-------GELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-------Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~ 134 (372)
....+..+..+|..++..|+|.+|+.+|.+|+++.-... .+..+..+.+|+++|.+|+.+
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 330 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL------------- 330 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 346788999999999999999999999999999852210 001233489999999999966
Q ss_pred ccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH
Q 017388 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (372)
Q Consensus 135 ~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~ 214 (372)
++++.|...
T Consensus 331 -----------------------------------------------------------------------g~~~~A~~~ 339 (457)
T 1kt0_A 331 -----------------------------------------------------------------------REYTKAVEC 339 (457)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------cCHHHHHHH
Confidence 257778777
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
++.|+.+. +..+.+|+++|.+++.+++|++|+.+|++||.+.. ..+.++++|+.++...+++++|
T Consensus 340 ~~~al~~~-------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P--------~~~~a~~~l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 340 CDKALGLD-------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP--------QNKAARLQISMCQKKAKEHNER 404 (457)
T ss_dssp HHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHHHHHHHH
Confidence 77777652 44689999999999999999999999999998853 3357899999999999998877
Q ss_pred HHH
Q 017388 295 IPY 297 (372)
Q Consensus 295 i~~ 297 (372)
...
T Consensus 405 ~~~ 407 (457)
T 1kt0_A 405 DRR 407 (457)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 117
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.03 E-value=4.1e-09 Score=104.37 Aligned_cols=173 Identities=18% Similarity=0.150 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc--CCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg--~~~~~~~e~~~~~ 143 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++..++.+..+-- .....
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-------- 373 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSL--------NPENVYPYIQLACLLYKQGKFTESEAFFNETKLK-------- 373 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 467899999999999999999999999997 577788999999999988776433110 00000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++... ..- -..+...-..++++.|...|+.++.+..
T Consensus 374 ----------~~~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 374 ----------FPTLP------EVP----------------------------TFFAEILTDRGDFDTAIKQYDIAKRLEE 409 (537)
T ss_dssp ----------CTTCT------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCh------HHH----------------------------HHHHHHHHHhCCHHHHHHHHHHHHHcCC
Confidence 00000 000 0000011224688999999999998876
Q ss_pred HhcCCCccHHHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchH
Q 017388 224 KHWGDSMEKVDILSALAEVALER----------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 293 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~----------~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~e 293 (372)
..... ......+..+|.++... |+|++|+..|++++.+.. ....+|+.||.+|...|++++
T Consensus 410 ~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p--------~~~~~~~~l~~~~~~~g~~~~ 480 (537)
T 3fp2_A 410 VQEKI-HVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDP--------RSEQAKIGLAQLKLQMEKIDE 480 (537)
T ss_dssp HCSSC-SSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHH
T ss_pred cchhh-HHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHhccHHH
Confidence 55432 22344567788888888 999999999999999842 335889999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 017388 294 AIPYCQKAISVCKS 307 (372)
Q Consensus 294 Ai~~~ekAl~i~~~ 307 (372)
|+.+|++++.+...
T Consensus 481 A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 481 AIELFEDSAILART 494 (537)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998654
No 118
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.02 E-value=1.8e-08 Score=81.82 Aligned_cols=102 Identities=23% Similarity=0.270 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++.+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~------------------------ 56 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKM------------------------ 56 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 678899999999999999999999999998 688899999999999965
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|...++.++.+.
T Consensus 57 ------------------------------------------------------------~~~~~A~~~~~~al~~~--- 73 (137)
T 3q49_B 57 ------------------------------------------------------------QQPEQALADCRRALELD--- 73 (137)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------cCHHHHHHHHHHHHHhC---
Confidence 25677777777777652
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l 266 (372)
+..+.+|..||.++...|+|++|+..|++++.+....
T Consensus 74 ----p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 74 ----GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ----chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 4468899999999999999999999999999998873
No 119
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.01 E-value=1.7e-10 Score=111.33 Aligned_cols=128 Identities=14% Similarity=0.016 Sum_probs=104.5
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCCC
Q 017388 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (372)
Q Consensus 78 ~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e~ 157 (372)
.+++|.+|+.+|.+++++ .|..+.+|+.+|.+|+..+
T Consensus 125 ~L~~~~~A~~~~~~a~~~--------~p~~a~~~~~~g~~~~~~g----------------------------------- 161 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE--------KLEQSTIVKERGTVYFKEG----------------------------------- 161 (336)
T ss_dssp EEEEEECCCCGGGCCHHH--------HHHHHHHHHHHHHHHHHHT-----------------------------------
T ss_pred EEeecccccchhcCCHHH--------HHHHHHHHHHHHHHHHHCC-----------------------------------
Confidence 567888999999999887 4899999999999999663
Q ss_pred CcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC--------C
Q 017388 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD--------S 229 (372)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~--------~ 229 (372)
+++.|...|+.|+.+....... .
T Consensus 162 -------------------------------------------------~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 192 (336)
T 1p5q_A 162 -------------------------------------------------KYKQALLQYKKIVSWLEYESSFSNEEAQKAQ 192 (336)
T ss_dssp -------------------------------------------------CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHH
T ss_pred -------------------------------------------------CHHHHHHHHHHHHHHhhccccCChHHHHHHH
Confidence 5666666666666654332110 1
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+..+.+|.+||.+++.+|+|++|+.+|+++|.+.. ..+.+|++||.+|...++|++|+.+|++|+.+.
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS--------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 23478999999999999999999999999999843 346899999999999999999999999999764
No 120
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.00 E-value=5.9e-11 Score=120.54 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..+..+|..++..|+|++|+.+|.+|+++ +|..+.+|+++|.+++.+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~---------------------- 53 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT---------------------- 53 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHh----------------------
Confidence 45677888999999999999999999999998 799999999999999965
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.|+.+
T Consensus 54 --------------------------------------------------------------g~~~~A~~~~~~al~l-- 69 (477)
T 1wao_1 54 --------------------------------------------------------------ECYGYALGDATRAIEL-- 69 (477)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHS--
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHh--
Confidence 2566777777777654
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH--HHhCCCchHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC--LEIGSKPQEAIPYCQK 300 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a--~~~~~~~~eAi~~~ek 300 (372)
.+..+.+|.+||.++..+|+|++|+..|++||++.. ..+.++++++.+ +...++|++|+.+|++
T Consensus 70 -----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p--------~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 70 -----DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP--------HDKDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST--------TCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 356789999999999999999999999999999842 223578888888 8888999999999983
No 121
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.00 E-value=6.8e-09 Score=101.77 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhc--CCCC----hhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 232 KVDILSALAEVALE---REDIETSLSDYQKALTILERMV--EPDS----RHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 232 ~A~~~~~LGev~~e---~~~y~~Al~~y~~AL~I~~~l~--~~~~----r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
.+.++..+|.+++. .|+|++|+..|++++.+.+..+ .+++ +..+.+|+.+|.+|...|++++|+.+|++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l 264 (514)
T 2gw1_A 185 EADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAI 264 (514)
T ss_dssp HHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 38899999999997 9999999999999999877666 4444 7789999999999999999999999999999
Q ss_pred HHHHH
Q 017388 303 SVCKS 307 (372)
Q Consensus 303 ~i~~~ 307 (372)
.+...
T Consensus 265 ~~~~~ 269 (514)
T 2gw1_A 265 ELFPR 269 (514)
T ss_dssp HHCCC
T ss_pred hhCcc
Confidence 76543
No 122
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.00 E-value=1.2e-08 Score=80.83 Aligned_cols=90 Identities=24% Similarity=0.270 Sum_probs=77.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|..+|+.+..+. +..+.++..+|.++...|+|++|+..|++++.+.... +..++.++.+|+++|.+|.
T Consensus 19 ~~~~A~~~~~~a~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~ 90 (131)
T 1elr_A 19 DFDTALKHYDKAKELD-------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-REDYRQIAKAYARIGNSYF 90 (131)
T ss_dssp CHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHHH
Confidence 6777777777776652 3457899999999999999999999999999998754 4456667899999999999
Q ss_pred hCCCchHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i 304 (372)
..+++++|+.+|++++.+
T Consensus 91 ~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 91 KEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHh
Confidence 999999999999999986
No 123
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.98 E-value=6.9e-09 Score=102.02 Aligned_cols=139 Identities=15% Similarity=0.112 Sum_probs=112.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--------hCCCChhHHHHHHHHHHHHHHhhhhhcCccc
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH--------YGELALECVNAYYQYGRALLYKAQEEADPLV 130 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~--------~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg 130 (372)
.+..+..+..|..+|..++..|+|++|+.+|.+|+++.... .....|..+.+|+++|.+++.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------- 286 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM--------- 286 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 45567789999999999999999999999999999975442 1235788999999999999965
Q ss_pred CCCCccCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHH
Q 017388 131 SVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDL 210 (372)
Q Consensus 131 ~~~~~~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~ 210 (372)
++++.
T Consensus 287 ---------------------------------------------------------------------------g~~~~ 291 (370)
T 1ihg_A 287 ---------------------------------------------------------------------------SDWQG 291 (370)
T ss_dssp ---------------------------------------------------------------------------TCHHH
T ss_pred ---------------------------------------------------------------------------cCHHH
Confidence 24666
Q ss_pred HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC
Q 017388 211 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (372)
Q Consensus 211 Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~ 290 (372)
|...++.|+.+ .+..+.+|.+||.++..+++|++|+.+|++||.+.. + -..++..|+.++...++
T Consensus 292 A~~~~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P-----~---~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 292 AVDSCLEALEI-------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAP-----E---DKAIQAELLKVKQKIKA 356 (370)
T ss_dssp HHHHHHHHHTT-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----C---CHHHHHHHHHHHHHHHH
Confidence 66666666543 456789999999999999999999999999999843 2 24778889988888877
Q ss_pred chHHHH
Q 017388 291 PQEAIP 296 (372)
Q Consensus 291 ~~eAi~ 296 (372)
++++..
T Consensus 357 ~~~a~k 362 (370)
T 1ihg_A 357 QKDKEK 362 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776644
No 124
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.98 E-value=1.3e-08 Score=92.91 Aligned_cols=163 Identities=15% Similarity=0.114 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHH----hhhhhcCcccCCCCccC
Q 017388 66 ADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLY----KAQEEADPLVSVPKKEG 137 (372)
Q Consensus 66 a~~L~~~G~~~~~----~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~----~ar~es~vLg~~~~~~~ 137 (372)
+..++.+|..++. .++|++|+.+|.+|+++ ..+.+++.+|.+++. .++.+.++--
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----------~~~~a~~~lg~~~~~g~~~~~~~~~A~~~------- 100 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----------NYSNGCHLLGNLYYSGQGVSQNTNKALQY------- 100 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHH-------
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHhCCCCcccCHHHHHHH-------
Confidence 3467889999999 99999999999999986 157799999999986 2221110000
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHH
Q 017388 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (372)
Q Consensus 138 e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~ 217 (372)
...........+. ..... .. .......++++.|+..|+.
T Consensus 101 -----------~~~a~~~~~~~a~--~~lg~---~~-------------------------~~~~~~~~~~~~A~~~~~~ 139 (273)
T 1ouv_A 101 -----------YSKACDLKYAEGC--ASLGG---IY-------------------------HDGKVVTRDFKKAVEYFTK 139 (273)
T ss_dssp -----------HHHHHHTTCHHHH--HHHHH---HH-------------------------HHCSSSCCCHHHHHHHHHH
T ss_pred -----------HHHHHHcCCccHH--HHHHH---HH-------------------------HcCCCcccCHHHHHHHHHH
Confidence 0000000000000 00000 00 0000113578888888887
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----CC
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GS 289 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~----~~ 289 (372)
|..+ ....++.+||.++.. .++|++|+..|++++++. .+.++++||.+|.. .+
T Consensus 140 a~~~---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~g~~~~~ 200 (273)
T 1ouv_A 140 ACDL---------NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK----------DSPGCFNAGNMYHHGEGATK 200 (273)
T ss_dssp HHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTCSSCC
T ss_pred HHhc---------CcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHcCCCCCc
Confidence 7752 246889999999999 999999999999999761 25899999999999 99
Q ss_pred CchHHHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISVC 305 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i~ 305 (372)
++++|+.+|++|+.+-
T Consensus 201 ~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 201 NFKEALARYSKACELE 216 (273)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhCC
Confidence 9999999999999873
No 125
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.97 E-value=1.5e-09 Score=105.02 Aligned_cols=39 Identities=23% Similarity=0.270 Sum_probs=34.5
Q ss_pred chhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017388 58 EREKTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (372)
Q Consensus 58 ~~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~ 96 (372)
.....+..+..+..+|..++..|+|.+|+.+|.+|+.+.
T Consensus 171 ~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~ 209 (338)
T 2if4_A 171 TVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM 209 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 345557789999999999999999999999999999983
No 126
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.97 E-value=2.6e-08 Score=84.54 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 68 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAM----------------------- 68 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHH-----------------------
Confidence 4667899999999999999999999999998 689999999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...|+.|+.+.
T Consensus 69 -------------------------------------------------------------g~~~~A~~~~~~al~l~-- 85 (148)
T 2vgx_A 69 -------------------------------------------------------------GQYDLAIHSYSYGAVMD-- 85 (148)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHS--
T ss_pred -------------------------------------------------------------hhHHHHHHHHHHHHhcC--
Confidence 25777777787777652
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
+.-..+|.+||.++...|+|++|+..|+++|.+..
T Consensus 86 -----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 86 -----IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp -----TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred -----CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 44578899999999999999999999999999975
No 127
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.95 E-value=2.3e-09 Score=108.14 Aligned_cols=139 Identities=14% Similarity=0.053 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccC
Q 017388 67 DELMEKGTNALKE---------SDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (372)
Q Consensus 67 ~~L~~~G~~~~~~---------gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~ 137 (372)
..+..+|..++.. |+|++|+.+|.+|+++ .|..+.+|+++|.+|+.+.-. .
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~------~------ 230 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--------DVLDGRSWYILGNAYLSLYFN------T------ 230 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH------T------
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHh------h------
Confidence 5678899999999 9999999999999998 699999999999999876100 0
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHH
Q 017388 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (372)
Q Consensus 138 e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~ 217 (372)
+ ...++++.|...|+.
T Consensus 231 ---------------------------------------------~-------------------~~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 231 ---------------------------------------------G-------------------QNPKISQQALSAYAQ 246 (474)
T ss_dssp ---------------------------------------------T-------------------CCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------c-------------------cccchHHHHHHHHHH
Confidence 0 012478889888888
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPY 297 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~ 297 (372)
|+.+.-. ....+.+|.+||.++...|+|++|+..|++|+.+... ...++++|+.++...+++++|+..
T Consensus 247 al~~~p~----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~--------~~~a~~~l~~~~~~lg~~~eAi~~ 314 (474)
T 4abn_A 247 AEKVDRK----ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPA--------WPEPQQREQQLLEFLSRLTSLLES 314 (474)
T ss_dssp HHHHCGG----GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC----cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876211 1167899999999999999999999999999998532 358999999999999999999999
Q ss_pred HHHH
Q 017388 298 CQKA 301 (372)
Q Consensus 298 ~ekA 301 (372)
|++.
T Consensus 315 ~~~~ 318 (474)
T 4abn_A 315 KGKT 318 (474)
T ss_dssp TTTC
T ss_pred hccc
Confidence 9876
No 128
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.95 E-value=2e-09 Score=94.44 Aligned_cols=91 Identities=14% Similarity=-0.004 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCc---------cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSM---------EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAEL 277 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~---------~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~ 277 (372)
+++.|...|..|+.++........ -.+.+|.+||.+++..|+|++|+.+|+++|.+. |..+.+
T Consensus 53 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~ 124 (198)
T 2fbn_A 53 EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID--------KNNVKA 124 (198)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHH
T ss_pred CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------cccHHH
Confidence 566666666666655433221110 125899999999999999999999999999983 334689
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 278 NFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 278 ~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
|+++|.+|...++|++|+.+|++++.+.
T Consensus 125 ~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 125 LYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999874
No 129
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=3.9e-08 Score=95.18 Aligned_cols=151 Identities=10% Similarity=0.016 Sum_probs=129.0
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccc
Q 017388 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDS 148 (372)
Q Consensus 69 L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~ 148 (372)
+..+|..+...|+++.|+.+|.+++.+...... .+..+.+++.+|.+++..
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~--------------------------- 148 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR--VFLKHSLSIKLATLHYQK--------------------------- 148 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC--CSSHHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHHHc---------------------------
Confidence 445677777889999999999999999876643 456899999999999865
Q ss_pred cccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC
Q 017388 149 VKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD 228 (372)
Q Consensus 149 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~ 228 (372)
+++..|..++..+..++.+. ..
T Consensus 149 ---------------------------------------------------------g~~~~A~~~l~~~~~~~~~~-~~ 170 (434)
T 4b4t_Q 149 ---------------------------------------------------------KQYKDSLALINDLLREFKKL-DD 170 (434)
T ss_dssp ---------------------------------------------------------TCHHHHHHHHHHHHHHHTTS-SC
T ss_pred ---------------------------------------------------------cChHHHHHHHHHHHHHHHhc-cc
Confidence 36888899999988887665 34
Q ss_pred CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 229 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 229 ~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
.+..+.+|..+|.++...++|++|...|++++.+...+. ..++..+..+..+|..|...++|++|..+|.+++..+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 171 KPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 578999999999999999999999999999999998774 345667999999999999999999999999999987643
No 130
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.93 E-value=1.9e-08 Score=78.18 Aligned_cols=116 Identities=20% Similarity=0.165 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
..+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~---------------------- 51 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKL--------DPHNHVLYSNRSAAYAKK---------------------- 51 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH----------------------
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHhh----------------------
Confidence 35678999999999999999999999999997 577788999999998855
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++++.|...++.+..+.
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~~~~~~- 68 (118)
T 1elw_A 52 --------------------------------------------------------------GDYQKAYEDGCKTVDLK- 68 (118)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhC-
Confidence 25666777777666542
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+....++..+|.++...|+|++|+..|++++.+.. ++ ..+++.++.+..
T Consensus 69 ------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~l~~~~~ 117 (118)
T 1elw_A 69 ------PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEA-----NN---PQLKEGLQNMEA 117 (118)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-----TC---HHHHHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC-----CC---HHHHHHHHHhhc
Confidence 34578999999999999999999999999997632 22 467777777653
No 131
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.93 E-value=3e-09 Score=112.36 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=106.5
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCC
Q 017388 77 LKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGE 156 (372)
Q Consensus 77 ~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e 156 (372)
+..|+|++|+.+|.+|++..-..-+..+|..+.+|+.+|.+|+.+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~----------------------------------- 446 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDL----------------------------------- 446 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHH-----------------------------------
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhc-----------------------------------
Confidence 789999999999999995544455667899999999999999966
Q ss_pred CCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Q 017388 157 SSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDIL 236 (372)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~ 236 (372)
++++.|...|+.|..+. +.-+.+|
T Consensus 447 -------------------------------------------------g~~~~A~~~~~~al~~~-------p~~~~a~ 470 (681)
T 2pzi_A 447 -------------------------------------------------GDVAKATRKLDDLAERV-------GWRWRLV 470 (681)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHHH-------CCCHHHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHhccC-------cchHHHH
Confidence 25677777777776542 4568999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 237 SALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 237 ~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+++|.+++..|+|++|+.+|++||.+.... +.+|++||.+|...|+|++ +.+|++|+.+-
T Consensus 471 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 471 WYRAVAELLTGDYDSATKHFTEVLDTFPGE--------LAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 999999999999999999999999986433 5899999999999999999 99999999753
No 132
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.93 E-value=4.6e-09 Score=107.30 Aligned_cols=120 Identities=13% Similarity=0.014 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCCCC
Q 017388 79 ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGESS 158 (372)
Q Consensus 79 ~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e~~ 158 (372)
.|+|++|+.+|.+++++ +|..+.+|+.+|.+++..+
T Consensus 2 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g------------------------------------ 37 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH--------RPQDFVAWLMLADAELGMG------------------------------------ 37 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHT------------------------------------
T ss_pred CccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcC------------------------------------
Confidence 48999999999999987 6888999999999999662
Q ss_pred cccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH
Q 017388 159 TASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA 238 (372)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~ 238 (372)
+++.|...|+.|+. ..+..+.+|.+
T Consensus 38 ------------------------------------------------~~~~A~~~~~~al~-------~~p~~~~~~~~ 62 (568)
T 2vsy_A 38 ------------------------------------------------DTTAGEMAVQRGLA-------LHPGHPEAVAR 62 (568)
T ss_dssp ------------------------------------------------CHHHHHHHHHHHHT-------TSTTCHHHHHH
T ss_pred ------------------------------------------------CHHHHHHHHHHHHH-------hCCCCHHHHHH
Confidence 45566666655554 34566899999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 239 LAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 239 LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
||.++..+|+|++|+..|+++|.+.. ..+.+|++||.+|...|++++|+.+|++++.+.
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAAP--------EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999842 336899999999999999999999999999874
No 133
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.93 E-value=1.9e-08 Score=81.61 Aligned_cols=86 Identities=21% Similarity=0.109 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...+..++.+. +..+.+|.+||.++...++|++|+.+|++++.+.. ..+.+|++||.+|.
T Consensus 24 ~~~~A~~~~~~al~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 24 KYPEAAACYGRAITRN-------PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG--------QSVKAHFFLGQCQL 88 (137)
T ss_dssp CHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhC-------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--------hhHHHHHHHHHHHH
Confidence 6777777777776652 44578999999999999999999999999999843 34689999999999
Q ss_pred hCCCchHHHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~~~ 307 (372)
..|++++|+.+|++++.+...
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999988543
No 134
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.92 E-value=2.3e-08 Score=83.36 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+.+|.+++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 65 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSL----------------------- 65 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHH-----------------------
Confidence 4667889999999999999999999999998 689999999999999855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...|+.|+.+.
T Consensus 66 -------------------------------------------------------------g~~~~A~~~~~~al~~~-- 82 (142)
T 2xcb_A 66 -------------------------------------------------------------GLYEQALQSYSYGALMD-- 82 (142)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------hhHHHHHHHHHHHHhcC--
Confidence 25777877787777652
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~ 265 (372)
+....+|.+||.++...|+|++|+..|++++.+...
T Consensus 83 -----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 83 -----INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp -----TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred -----CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 345678999999999999999999999999999863
No 135
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.92 E-value=5.8e-08 Score=75.98 Aligned_cols=116 Identities=24% Similarity=0.325 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~------------------------ 56 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ------------------------ 56 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 567889999999999999999999999987 467788999999988854
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++++.|..+++.+..+.
T Consensus 57 ------------------------------------------------------------~~~~~A~~~~~~~~~~~--- 73 (125)
T 1na0_A 57 ------------------------------------------------------------GDYDEAIEYYQKALELD--- 73 (125)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHhC---
Confidence 25667777777766542
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 288 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~ 288 (372)
+....++..||.++...|+|++|+..|++++.+.. ....+++.||.++...
T Consensus 74 ----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 74 ----PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--------NNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHH
T ss_pred ----CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHhc
Confidence 33467899999999999999999999999998742 2347888899888654
No 136
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.90 E-value=2.1e-08 Score=89.82 Aligned_cols=44 Identities=11% Similarity=-0.007 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL 119 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl 119 (372)
+..++.+|..++..++|++|+.+|.+|++. ..+.+++++|.+++
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------g~~~a~~~lg~~y~ 61 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----------GDGDALALLAQLKI 61 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----------TCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHH
Confidence 567889999999999999999999999874 34678999998876
No 137
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.90 E-value=5.1e-08 Score=92.07 Aligned_cols=155 Identities=14% Similarity=0.103 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCc--ccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~v--Lg~~~~~~~e~~~~~ 143 (372)
+.-++.+|..++..|+|++|+.+|.+ |....+++.+|.+|+.+++.+... |-.....
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-------------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~-------- 159 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-------------GDSLECMAMTVQILLKLDRLDLARKELKKMQDQ-------- 159 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-------------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh--------
Confidence 44688999999999999999999987 456679999999999887764321 1000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHH-------HHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWK-------MLD 216 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe-------~Le 216 (372)
++.. ..-.+..+|- -++
T Consensus 160 ----------~p~~----------------------------------------------~~~~l~~a~~~l~~~~~~~~ 183 (291)
T 3mkr_A 160 ----------DEDA----------------------------------------------TLTQLATAWVSLAAGGEKLQ 183 (291)
T ss_dssp ----------CTTC----------------------------------------------HHHHHHHHHHHHHHCTTHHH
T ss_pred ----------CcCc----------------------------------------------HHHHHHHHHHHHHhCchHHH
Confidence 0000 0012222332 134
Q ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchH-HH
Q 017388 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE-AI 295 (372)
Q Consensus 217 ~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~e-Ai 295 (372)
.|+.+|++.....+.-+.+|++||.+++..|+|++|+..|+++|.+.+ .-+.+|++||.++...|++.+ +.
T Consensus 184 eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p--------~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 184 DAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDS--------GHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCCHHHHH
Confidence 444555444333456789999999999999999999999999998853 336889999999999999987 56
Q ss_pred HHHHHHHHHH
Q 017388 296 PYCQKAISVC 305 (372)
Q Consensus 296 ~~~ekAl~i~ 305 (372)
.+|++++.+.
T Consensus 256 ~~~~~~~~~~ 265 (291)
T 3mkr_A 256 RYLSQLKDAH 265 (291)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 8889988764
No 138
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.90 E-value=8.3e-10 Score=111.16 Aligned_cols=127 Identities=14% Similarity=0.049 Sum_probs=104.1
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCCC
Q 017388 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (372)
Q Consensus 78 ~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e~ 157 (372)
..++|++|+.+|..++++ .|..+..|+.+|.+|+..+
T Consensus 246 ~l~~~~~A~~~~~~~~~~--------~~~~a~~~~~~G~~~~~~g----------------------------------- 282 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE--------KLEQAAIVKEKGTVYFKGG----------------------------------- 282 (457)
T ss_dssp EEEEEECCCCGGGSCHHH--------HHHHHHHHHHHHHHHHHTT-----------------------------------
T ss_pred hhhhcccCcchhhcCHHH--------HHHHHHHHHHHHHHHHhCC-----------------------------------
Confidence 445778899999888887 4899999999999999652
Q ss_pred CcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--------CC
Q 017388 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--------DS 229 (372)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~--------~~ 229 (372)
+++.|...|..|+.+...... ..
T Consensus 283 -------------------------------------------------~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 313 (457)
T 1kt0_A 283 -------------------------------------------------KYMQAVIQYGKIVSWLEMEYGLSEKESKASE 313 (457)
T ss_dssp -------------------------------------------------CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHH
T ss_pred -------------------------------------------------CHHHHHHHHHHHHHHhcccccCChHHHHHHH
Confidence 567777777777766533211 01
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
...+.+|.+||.+++.+++|++|+.+|++||.+.. ..+.+||++|.+|..+++|++|+.+|++|+.+
T Consensus 314 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS--------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 23589999999999999999999999999999853 33689999999999999999999999999865
No 139
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.89 E-value=6.7e-09 Score=97.40 Aligned_cols=102 Identities=23% Similarity=0.249 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..+..+|..++..|+|++|+.+|.+|+.+ +|..+.+|+++|.+++.++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~----------------------- 52 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQ----------------------- 52 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTT-----------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhc-----------------------
Confidence 567889999999999999999999999998 6888999999999999652
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
+++.|...++.|+.
T Consensus 53 -------------------------------------------------------------~~~~A~~~~~~al~----- 66 (281)
T 2c2l_A 53 -------------------------------------------------------------QPEQALADCRRALE----- 66 (281)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHTT-----
T ss_pred -------------------------------------------------------------CHHHHHHHHHHHHH-----
Confidence 45556555555543
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l 266 (372)
..+....+|.+||.++...|+|++|+.+|++++.+....
T Consensus 67 --~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 67 --LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp --SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred --hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 345678999999999999999999999999999998754
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.88 E-value=1.4e-08 Score=83.26 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCcc
Q 017388 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~ 147 (372)
.++.+|..++..|+|++|+.+|.+|+.+ .|..+.+|+.+|.+++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~-------------------------- 64 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAEN-------------------------- 64 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT--------------------------
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHc--------------------------
Confidence 4688999999999999999999999998 799999999999999855
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC
Q 017388 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG 227 (372)
Q Consensus 148 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~ 227 (372)
++++.|...|+.|+.+
T Consensus 65 ----------------------------------------------------------g~~~~A~~~~~~al~l------ 80 (121)
T 1hxi_A 65 ----------------------------------------------------------EKDGLAIIALNHARML------ 80 (121)
T ss_dssp ----------------------------------------------------------TCHHHHHHHHHHHHHH------
T ss_pred ----------------------------------------------------------CCHHHHHHHHHHHHHh------
Confidence 2566677777766654
Q ss_pred CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017388 228 DSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (372)
Q Consensus 228 ~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~ 265 (372)
.+....+|..||.++...|+|++|+..|+++|.+...
T Consensus 81 -~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 81 -DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred -CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 3456789999999999999999999999999987653
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=3.9e-08 Score=80.14 Aligned_cols=119 Identities=15% Similarity=0.128 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+++.+. ..++....+|+.+|.+++..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~a~~~~~~----------------------- 78 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLD-----ATPQDQAVLHRNRAACHLKL----------------------- 78 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc-----ccchHHHHHHHHHHHHHHHH-----------------------
Confidence 36788999999999999999999999999862 22333489999999998855
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.++.+.
T Consensus 79 -------------------------------------------------------------~~~~~A~~~~~~~~~~~-- 95 (148)
T 2dba_A 79 -------------------------------------------------------------EDYDKAETEASKAIEKD-- 95 (148)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHT--
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHhhC--
Confidence 25777777777777652
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~ 287 (372)
+....+|..+|.++...|+|++|+..|++++.+.. +++ .++..++.+...
T Consensus 96 -----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~~---~~~~~l~~~~~~ 145 (148)
T 2dba_A 96 -----GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEP-----KNK---VFQEALRNISGP 145 (148)
T ss_dssp -----SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS-----SCH---HHHHHHHHHHCS
T ss_pred -----ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----CcH---HHHHHHHHHHhh
Confidence 34588999999999999999999999999998742 332 455556655443
No 142
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.85 E-value=5e-09 Score=92.21 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=81.7
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCCC
Q 017388 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (372)
Q Consensus 78 ~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e~ 157 (372)
..+.|++|+.+|.+|+++ .|..+++|+++|.+|+.+++.+.
T Consensus 14 r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~------------------------------- 54 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHS------------------------------- 54 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSC-------------------------------
T ss_pred HHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccch-------------------------------
Confidence 456799999999999999 79999999999999999976621
Q ss_pred CcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Q 017388 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILS 237 (372)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~ 237 (372)
-..|.++++.|+..|++.+...|..+++|+
T Consensus 55 --------------------------------------------------g~~al~~~~eAi~~le~AL~ldP~~~~A~~ 84 (158)
T 1zu2_A 55 --------------------------------------------------ISDAKQMIQEAITKFEEALLIDPKKDEAVW 84 (158)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred --------------------------------------------------hhhhHhHHHHHHHHHHHHHHhCcCcHHHHH
Confidence 011445667777777776665688999999
Q ss_pred HHHHHHHhcC-----------CHHHHHHHHHHHHHHHHH
Q 017388 238 ALAEVALERE-----------DIETSLSDYQKALTILER 265 (372)
Q Consensus 238 ~LGev~~e~~-----------~y~~Al~~y~~AL~I~~~ 265 (372)
+||.+|...| +|++|+.+|++||+|.+.
T Consensus 85 ~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 85 CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 9999999885 899999999999999653
No 143
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.84 E-value=1.5e-07 Score=75.46 Aligned_cols=117 Identities=18% Similarity=0.122 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCcc
Q 017388 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~ 147 (372)
.++.+|..++..|+|++|+.+|.+++.+ .+.++....+++++|.+++..
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~-------------------------- 52 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYAT-------------------------- 52 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHT--------------------------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHh--------------------------
Confidence 4788999999999999999999999886 244566668999999999855
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC
Q 017388 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG 227 (372)
Q Consensus 148 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~ 227 (372)
++++.|...|+.++.++-
T Consensus 53 ----------------------------------------------------------~~~~~A~~~~~~~~~~~p---- 70 (129)
T 2xev_A 53 ----------------------------------------------------------RNFQLAEAQFRDLVSRYP---- 70 (129)
T ss_dssp ----------------------------------------------------------TCHHHHHHHHHHHHHHCT----
T ss_pred ----------------------------------------------------------ccHHHHHHHHHHHHHHCC----
Confidence 267778888887776532
Q ss_pred CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 228 DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 228 ~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
.......++..||.++...|+|++|+..|++++.+. |+++....+...|.
T Consensus 71 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 71 THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQ 120 (129)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHH
Confidence 123468999999999999999999999999999875 45554444444443
No 144
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.81 E-value=7.5e-09 Score=83.49 Aligned_cols=88 Identities=9% Similarity=-0.024 Sum_probs=69.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|+.|+.+. ...+..+.+|.+||.++..+|+|++|+..|+++|.+.+ ..+.+|++||.+|
T Consensus 4 g~~~~A~~~~~~al~~~----~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~ 71 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASG----LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP--------NHQALRVFYAMVL 71 (117)
T ss_dssp ---CCCHHHHHHHHSSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcC----CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CchHHHHHHHHHH
Confidence 35555655555555421 00367899999999999999999999999999998843 2368999999999
Q ss_pred HhCCCchHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~ 305 (372)
...|++++|+.+|++++.+.
T Consensus 72 ~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 72 YNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999874
No 145
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.81 E-value=2.5e-09 Score=94.14 Aligned_cols=86 Identities=19% Similarity=0.196 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017388 214 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDI----------ETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (372)
Q Consensus 214 ~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y----------~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~ 283 (372)
.++.|+..|.+.....|.-+++|+++|.+++..++| ++|+..|++||.|... .+.+||+||.
T Consensus 17 ~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~--------~~~A~~~LG~ 88 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK--------KDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT--------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC--------cHHHHHHHHH
Confidence 355556666555554577899999999999999886 5999999999999654 4699999999
Q ss_pred HHHhCC-----------CchHHHHHHHHHHHHHHH
Q 017388 284 CLEIGS-----------KPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 284 a~~~~~-----------~~~eAi~~~ekAl~i~~~ 307 (372)
+|...+ +|++|+.+|++||++-..
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 999875 899999999999988543
No 146
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.80 E-value=1.1e-07 Score=89.64 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccC-CCCccCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVS-VPKKEGDSQQGSD 144 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~-~~~~~~e~~~~~~ 144 (372)
...+..++..+...|++++|+..|.+.+.. ..+|..+.+++.+|.+|+..++.+...--. .|.
T Consensus 65 ~~a~~~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~~~---------- 128 (291)
T 3mkr_A 65 LQAVRMFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGD---------- 128 (291)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCC----------
Confidence 456667888888999999999999998764 136888999999999999988764431100 000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
..... .. .+......++++.|...|+.++.+.
T Consensus 129 ~~~~~--------------~~--------------------------------l~~~~~~~g~~~~A~~~l~~~~~~~-- 160 (291)
T 3mkr_A 129 SLECM--------------AM--------------------------------TVQILLKLDRLDLARKELKKMQDQD-- 160 (291)
T ss_dssp SHHHH--------------HH--------------------------------HHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred CHHHH--------------HH--------------------------------HHHHHHHCCCHHHHHHHHHHHHhhC--
Confidence 00000 00 0000112356777777777776552
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
+.. ........+..++...|+|++|+..|++++.+. | + -+.+|+++|.+|...|++++|+.+|+++|.+
T Consensus 161 -p~~--~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~----p-~---~~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 161 -EDA--TLTQLATAWVSLAAGGEKLQDAYYIFQEMADKC----S-P---TLLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp -TTC--HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS----C-C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -cCc--HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC----C-C---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 111 111111122234456799999999999999872 2 2 3689999999999999999999999999987
Q ss_pred HHHHHHHH
Q 017388 305 CKSRVQRL 312 (372)
Q Consensus 305 ~~~rl~~l 312 (372)
......-+
T Consensus 230 ~p~~~~~l 237 (291)
T 3mkr_A 230 DSGHPETL 237 (291)
T ss_dssp CTTCHHHH
T ss_pred CCCCHHHH
Confidence 55433333
No 147
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.79 E-value=2.5e-08 Score=85.45 Aligned_cols=135 Identities=14% Similarity=0.157 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|..+...++.+...-.. ..
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~---------- 98 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVL--------DTTSAEAYYILGSANFMIDEKQAAIDAL--QR---------- 98 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CchhHHHHHHHHHHHHHcCCHHHHHHHH--HH----------
Confidence 567899999999999999999999999988 6888999999999999876543221100 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
... ..+... ... -..+......++++.|.+.|+.++.+
T Consensus 99 --a~~--~~~~~~------~~~----------------------------~~lg~~~~~~g~~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 99 --AIA--LNTVYA------DAY----------------------------YKLGLVYDSMGEHDKAIEAYEKTISI---- 136 (184)
T ss_dssp --HHH--HCTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred --HHH--hCccch------HHH----------------------------HHHHHHHHHhCCchhHHHHHHHHHHh----
Confidence 000 000000 000 00000011234566666555555543
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017388 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~ 265 (372)
.|..+.+|.+||.++..+|+|++|+.+|++||++.+.
T Consensus 137 ---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 137 ---KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred ---cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 4567899999999999999999999999999998653
No 148
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.79 E-value=8.7e-08 Score=76.37 Aligned_cols=80 Identities=15% Similarity=0.089 Sum_probs=66.0
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPY 297 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~ 297 (372)
|..+|.+.....+..+.++..+|.++...++|++|+..|++++.+.. ..+.+++++|.+|...+++++|+.+
T Consensus 35 A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~ 106 (133)
T 2lni_A 35 AMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP--------TFIKGYTRKAAALEAMKDYTKAMDV 106 (133)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CchHHHHHHHHHHHHHhhHHHHHHH
Confidence 33344443333455689999999999999999999999999999732 2468999999999999999999999
Q ss_pred HHHHHHHH
Q 017388 298 CQKAISVC 305 (372)
Q Consensus 298 ~ekAl~i~ 305 (372)
|++++.+.
T Consensus 107 ~~~~~~~~ 114 (133)
T 2lni_A 107 YQKALDLD 114 (133)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999874
No 149
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.77 E-value=4e-08 Score=78.46 Aligned_cols=82 Identities=12% Similarity=0.064 Sum_probs=69.4
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPY 297 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~ 297 (372)
|+..|.+.....+..+.+|+.||.+++..|+|++|+..|+++|.+. |..+.+|++||.+|...|++++|+.+
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~ 75 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD--------PTYSVAWKWLGKTLQGQGDRAGARQA 75 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3445555555556678999999999999999999999999999874 23468999999999999999999999
Q ss_pred HHHHHHHHHH
Q 017388 298 CQKAISVCKS 307 (372)
Q Consensus 298 ~ekAl~i~~~ 307 (372)
|++++.+...
T Consensus 76 ~~~al~~~~~ 85 (115)
T 2kat_A 76 WESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhccc
Confidence 9999998653
No 150
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.76 E-value=5.2e-08 Score=78.19 Aligned_cols=91 Identities=13% Similarity=0.061 Sum_probs=76.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|+.+..++ + ..+....++..+|.++...|+|++|+..|++++.+. |+++..+.+++.||.+|
T Consensus 16 ~~~~~A~~~~~~~~~~~---p-~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~~~~~la~~~ 86 (129)
T 2xev_A 16 GKYDDASQLFLSFLELY---P-NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY-----PTHDKAAGGLLKLGLSQ 86 (129)
T ss_dssp TCHHHHHHHHHHHHHHC---S-SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHC---C-CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC-----CCCcccHHHHHHHHHHH
Confidence 57788877777666543 1 234566899999999999999999999999999864 46667789999999999
Q ss_pred HhCCCchHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~ 305 (372)
...|++++|+.+|++++...
T Consensus 87 ~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 87 YGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHTTCHHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHHHHC
Confidence 99999999999999998764
No 151
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.75 E-value=1.9e-07 Score=72.97 Aligned_cols=84 Identities=24% Similarity=0.249 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|..+++.+..+. +....++..+|.++...|+|++|+..|++++.+. +....+++.||.+|.
T Consensus 24 ~~~~A~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 24 DYDEAIEYYQKALELD-------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PNNAEAWYNLGNAYY 88 (125)
T ss_dssp CHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC-------cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CccHHHHHHHHHHHH
Confidence 5677777777776542 3347889999999999999999999999999863 223578999999999
Q ss_pred hCCCchHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~ 305 (372)
..+++++|+.+|++++.+.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HhcCHHHHHHHHHHHHHhC
Confidence 9999999999999998763
No 152
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.75 E-value=2.2e-07 Score=73.20 Aligned_cols=84 Identities=18% Similarity=0.173 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
+++.|...++.+..+. +..+.++..+|.++...|+|++|+..|.+++.+. |....+++.+|.+|.
T Consensus 27 ~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 27 NFEAAVHFYGKAIELN-------PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID--------PAYSKAYGRMGLALS 91 (131)
T ss_dssp CHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC--------ccCHHHHHHHHHHHH
Confidence 5677777777666542 3457899999999999999999999999999873 223678999999999
Q ss_pred hCCCchHHHHHHHHHHHHH
Q 017388 287 IGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 287 ~~~~~~eAi~~~ekAl~i~ 305 (372)
..+++++|+.+|++++.+.
T Consensus 92 ~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHS
T ss_pred HhCCHHHHHHHHHHHHhcC
Confidence 9999999999999999873
No 153
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.71 E-value=1.7e-07 Score=88.13 Aligned_cols=85 Identities=12% Similarity=0.022 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHH
Q 017388 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 296 (372)
Q Consensus 217 ~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~ 296 (372)
.|+.+|++.+...+..+.+|..+|.++...|++++|+..|++|+.+. .++++ .-...|..++..+...|+++.|+.
T Consensus 187 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--~l~p~--~~~~l~~~~~~~~~~~g~~~~a~~ 262 (308)
T 2ond_A 187 VAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG--SLPPE--KSGEIWARFLAFESNIGDLASILK 262 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSS--SSCGG--GCHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcc--CCCHH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 34444444433223334445555555555555555555555544421 00110 112344444444444555555555
Q ss_pred HHHHHHHHH
Q 017388 297 YCQKAISVC 305 (372)
Q Consensus 297 ~~ekAl~i~ 305 (372)
.+++++.++
T Consensus 263 ~~~~a~~~~ 271 (308)
T 2ond_A 263 VEKRRFTAF 271 (308)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 555444444
No 154
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.71 E-value=4.3e-08 Score=77.44 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=62.0
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
+.-+.+++.||.+++..|+|++|+..|+++|.+... .+.+|++||.+|...|++++|+.+|++++.+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD--------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 456789999999999999999999999999998533 3479999999999999999999999999998543
No 155
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.70 E-value=4.3e-07 Score=86.90 Aligned_cols=206 Identities=7% Similarity=0.006 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHH-------HHHHHHhhhhhcCcccC---CC
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQY-------GRALLYKAQEEADPLVS---VP 133 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~y-------G~ALl~~ar~es~vLg~---~~ 133 (372)
+.+..+|..|.-+ ..+++..|..+|.+|+++ .|.++++++.+ |.+|..+.|+. ..||. ..
T Consensus 5 ~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~-~a~~~~~~~l 74 (282)
T 4f3v_A 5 DRLASLFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSR-RNFGQLSGSV 74 (282)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTG-GGTTHHHHTT
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHH-HHHHHHHHHh
Confidence 4577889999886 689999999999999999 79999999999 99999999874 33442 11
Q ss_pred CccCCCCCCCCCccccccccC--CCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHH
Q 017388 134 KKEGDSQQGSDKDDSVKNAVN--GESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLA 211 (372)
Q Consensus 134 ~~~~e~~~~~~~d~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~A 211 (372)
... ........+ +--. .+.-.+ . ..++--- .-....-..++++.|
T Consensus 75 ~l~---------p~~l~a~~~~~g~y~--~~~~~v----~--~r~dl~L----------------ayA~~L~~~g~y~eA 121 (282)
T 4f3v_A 75 QIS---------MSTLNARIAIGGLYG--DITYPV----T--SPLAITM----------------GFAACEAAQGNYADA 121 (282)
T ss_dssp TCC---------GGGGCCEEECCTTTC--CCEEEC----S--SHHHHHH----------------HHHHHHHHHTCHHHH
T ss_pred cCC---------hhhhhhhhccCCccc--cccccc----C--CHhHHHH----------------HHHHHHHHCCCHHHH
Confidence 100 000000000 0000 000000 0 0000000 000000011222222
Q ss_pred HHHH--------------------------HHHHHHHHHhcCCC-cc-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 212 WKML--------------------------DVARAIAEKHWGDS-ME-KVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 212 we~L--------------------------e~Ar~I~ek~~~~~-~~-~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
.++| +.|+..|.+..... +. ...+|++||.++..+|+|++|+..|++++.
T Consensus 122 ~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~-- 199 (282)
T 4f3v_A 122 MEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND-- 199 (282)
T ss_dssp HHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc--
Confidence 2222 23333333332211 11 256899999999999999999999998872
Q ss_pred HHhcCCCChh-HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017388 264 ERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLG 320 (372)
Q Consensus 264 ~~l~~~~~r~-iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~~~ 320 (372)
++..|. ..++++++|+|+..+|+.++|..+|++++.+... ......|....
T Consensus 200 ----g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~--~~~~~aL~~~~ 251 (282)
T 4f3v_A 200 ----SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE--PKVAAALKDPS 251 (282)
T ss_dssp ----STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC--HHHHHHHHCTT
T ss_pred ----CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--HHHHHHHhCCC
Confidence 333244 6789999999999999999999999999988665 66666666543
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.70 E-value=1.3e-08 Score=83.47 Aligned_cols=85 Identities=9% Similarity=0.031 Sum_probs=69.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|+.|+. ..+..+.+|..||.++...|+|++|+..|+++|.+... ...+|++||.+|
T Consensus 31 g~~~~A~~~~~~al~-------~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--------~~~~~~~la~~~ 95 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQ-------KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK--------DIAVHAALAVSH 95 (121)
T ss_dssp TCHHHHHHHHHHHHH-------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHH
Confidence 345555555554444 34667999999999999999999999999999998532 357999999999
Q ss_pred HhCCCchHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~ 305 (372)
...|++++|+.+|++++.+-
T Consensus 96 ~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999998764
No 157
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.69 E-value=1.4e-07 Score=82.29 Aligned_cols=107 Identities=18% Similarity=0.147 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+|+.+ .|..+.+|+.+|.+++.++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~lg~~~~~~~----------------------- 85 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINR--------DKHLAVAYFQRGMLYYQTE----------------------- 85 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT-----------------------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcc-----------------------
Confidence 457899999999999999999999999998 5888999999999999652
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
+++.|+..|+.++.+....
T Consensus 86 -------------------------------------------------------------~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 86 -------------------------------------------------------------KYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHTTTTC
T ss_pred -------------------------------------------------------------cHHHHHHHHHHHHHhCCCc
Confidence 5667777777777654332
Q ss_pred c---------CCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 226 W---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 226 ~---------~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
. ...+..+.+|.+||.++...|+|++|+..|++++.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 105 QLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp SEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 1 12356789999999999999999999999999998754
No 158
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.65 E-value=5.5e-07 Score=80.50 Aligned_cols=132 Identities=17% Similarity=0.198 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCC
Q 017388 66 ADELMEKGTNALKES----DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (372)
Q Consensus 66 a~~L~~~G~~~~~~g----dy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~ 141 (372)
+..++.+|..++. + ++.+|+.+|.+|++. ..+.+++++|.+++.-- |
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~----------g~~~a~~~Lg~~y~~g~-------g----------- 100 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA----------GSKSGEIVLARVLVNRQ-------A----------- 100 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHTCGG-------G-----------
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHcCC-------C-----------
Confidence 4567788988887 7 999999999999763 46779999998887220 0
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
-..++..|...|+.|.
T Consensus 101 --------------------------------------------------------------~~~d~~~A~~~~~~A~-- 116 (212)
T 3rjv_A 101 --------------------------------------------------------------GATDVAHAITLLQDAA-- 116 (212)
T ss_dssp --------------------------------------------------------------SSCCHHHHHHHHHHHT--
T ss_pred --------------------------------------------------------------CccCHHHHHHHHHHHH--
Confidence 0125666666655554
Q ss_pred HHHhcCCCc--cHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCC------
Q 017388 222 AEKHWGDSM--EKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS------ 289 (372)
Q Consensus 222 ~ek~~~~~~--~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~------ 289 (372)
...+ ..+.++.+||.++.. ..++++|+..|++|+.+. .+ +.++++||.+|....
T Consensus 117 -----~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~------~~---~~a~~~Lg~~y~~g~gg~~~~ 182 (212)
T 3rjv_A 117 -----RDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLS------RT---GYAEYWAGMMFQQGEKGFIEP 182 (212)
T ss_dssp -----SSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTS------CT---THHHHHHHHHHHHCBTTTBCC
T ss_pred -----HcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcC------CC---HHHHHHHHHHHHcCCCCCCCC
Confidence 3222 468999999999999 899999999999998761 11 358999999998652
Q ss_pred CchHHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISV 304 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i 304 (372)
++++|+.+|++|++.
T Consensus 183 d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 183 NKQKALHWLNVSCLE 197 (212)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc
Confidence 899999999999876
No 159
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.63 E-value=2.4e-07 Score=90.97 Aligned_cols=91 Identities=13% Similarity=0.063 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHHHHHhc---------CCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHW---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAEL 277 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~---------~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~ 277 (372)
+++.|...|+.|+.++.... ...+..+.+|.+||.+++.+++|++|+.+|++||.+. |..+.+
T Consensus 238 ~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a 309 (370)
T 1ihg_A 238 NWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID--------PSNTKA 309 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------TTCHHH
T ss_pred CHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC--------chhHHH
Confidence 67778888888887765431 1235678999999999999999999999999999863 344799
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 278 NFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 278 ~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
|++||.+|...++|++|+.+|++|+.+.
T Consensus 310 ~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 310 LYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999873
No 160
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.61 E-value=2e-07 Score=87.33 Aligned_cols=86 Identities=21% Similarity=0.111 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|..|+.+ .+..+.+|.++|.++...|+|++|+.+|+++|.+. |..+.+|++||.+|
T Consensus 18 g~~~~A~~~~~~al~~-------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 18 RKYPEAAACYGRAITR-------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELD--------GQSVKAHFFLGQCQ 82 (281)
T ss_dssp TCHHHHHHHHHHHHHH-------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHH
Confidence 3677777777777664 34568999999999999999999999999999873 33468999999999
Q ss_pred HhCCCchHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~ 306 (372)
...|++++|+.+|++++.+..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999998865
No 161
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=2.4e-07 Score=75.30 Aligned_cols=82 Identities=18% Similarity=0.100 Sum_probs=66.7
Q ss_pred HHHHHHHHHhcCCCcc---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCch
Q 017388 216 DVARAIAEKHWGDSME---KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 292 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~---~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~ 292 (372)
+.|..+|.+.....+. ...+|.++|.++...++|++|+..|++++.+.. ..+.+|+++|.+|...++++
T Consensus 45 ~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~~a~~~~~~~~~~ 116 (148)
T 2dba_A 45 GGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG--------GDVKALYRRSQALEKLGRLD 116 (148)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS--------CCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc--------cCHHHHHHHHHHHHHcCCHH
Confidence 3444444444333333 489999999999999999999999999998732 23689999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 293 EAIPYCQKAISVC 305 (372)
Q Consensus 293 eAi~~~ekAl~i~ 305 (372)
+|+.+|++++.+.
T Consensus 117 ~A~~~~~~al~~~ 129 (148)
T 2dba_A 117 QAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999874
No 162
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.61 E-value=1.7e-07 Score=72.13 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCcc
Q 017388 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~ 147 (372)
.++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~-------------------------- 53 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNL-------------------------- 53 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHT--------------------------
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHc--------------------------
Confidence 4567899999999999999999999998 577788999999999855
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC
Q 017388 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG 227 (372)
Q Consensus 148 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~ 227 (372)
++++.|...++.++.+
T Consensus 54 ----------------------------------------------------------~~~~~A~~~~~~a~~~------ 69 (112)
T 2kck_A 54 ----------------------------------------------------------ERYEEAVDCYNYVINV------ 69 (112)
T ss_dssp ----------------------------------------------------------TCHHHHHHHHHHHHHT------
T ss_pred ----------------------------------------------------------cCHHHHHHHHHHHHHh------
Confidence 2566777777776654
Q ss_pred CCcc--HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHH
Q 017388 228 DSME--KVDILSALAEVALER-EDIETSLSDYQKALTIL 263 (372)
Q Consensus 228 ~~~~--~A~~~~~LGev~~e~-~~y~~Al~~y~~AL~I~ 263 (372)
.+. ...++..||.++... |+|++|+..|++++...
T Consensus 70 -~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 70 -IEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp -SCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred -CcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 234 688999999999999 99999999999998653
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.61 E-value=1.2e-07 Score=73.79 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
.+.+|..+|.++...|+|++|+..|+++|.+.. ..+.+|+++|.+|...|+|++|+.+|++++.+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP--------QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 478899999999999999999999999999843 2368899999999999999999999999998753
No 164
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.58 E-value=2.2e-07 Score=77.09 Aligned_cols=86 Identities=15% Similarity=0.061 Sum_probs=73.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...++.++.+. +..+.++..+|.++...|+|++|+..|++++.+.. ..+.+|+++|.+|
T Consensus 27 ~~~~~A~~~~~~al~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~~a~~~ 91 (166)
T 1a17_A 27 KDYENAIKFYSQAIELN-------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--------KYIKGYYRRAASN 91 (166)
T ss_dssp TCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHH
Confidence 36777777777776642 34588999999999999999999999999999842 3368999999999
Q ss_pred HhCCCchHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~ 306 (372)
...|++++|+.+|++++.+..
T Consensus 92 ~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHST
T ss_pred HHhccHHHHHHHHHHHHHhCC
Confidence 999999999999999998754
No 165
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.58 E-value=5.4e-07 Score=84.64 Aligned_cols=85 Identities=9% Similarity=0.005 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhcCCCccHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH-HhCCCch
Q 017388 215 LDVARAIAEKHWGDSMEKVD-ILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL-EIGSKPQ 292 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~-~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~-~~~~~~~ 292 (372)
++.|+.+|++.+...+.-.. +|.++|.++...|++++|+..|++|+.+. +.+ +.+|..++... ...|+++
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-----p~~---~~~~~~~a~~~~~~~~~~~ 186 (308)
T 2ond_A 115 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-----RTR---HHVYVTAALMEYYCSKDKS 186 (308)
T ss_dssp HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST-----TCC---THHHHHHHHHHHHTSCCHH
T ss_pred HHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCC---HHHHHHHHHHHHHHcCCHH
Confidence 57888888888775555454 88889999888999999999998888753 222 34555555543 2378899
Q ss_pred HHHHHHHHHHHHHHH
Q 017388 293 EAIPYCQKAISVCKS 307 (372)
Q Consensus 293 eAi~~~ekAl~i~~~ 307 (372)
+|+..|+++|.+...
T Consensus 187 ~A~~~~~~al~~~p~ 201 (308)
T 2ond_A 187 VAFKIFELGLKKYGD 201 (308)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999887653
No 166
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.56 E-value=1.2e-07 Score=84.42 Aligned_cols=85 Identities=9% Similarity=0.063 Sum_probs=70.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA----------------LAEVALEREDIETSLSDYQKALTILERMVEP 269 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~----------------LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~ 269 (372)
++++.|...|+.++.+ .|.-+.+|.. ||.++...|+|++|+..|+++|.+.+
T Consensus 18 g~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p----- 85 (208)
T 3urz_A 18 GQNGQAVSYFRQTIAL-------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAP----- 85 (208)
T ss_dssp TCHHHHHHHHHHHHHH-------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----
T ss_pred CCHHHHHHHHHHHHHh-------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----
Confidence 4677777777766654 3445666666 99999999999999999999999853
Q ss_pred CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 270 DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 270 ~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.-+.+|++||.+|...|++++|+.+|+++|.+-
T Consensus 86 ---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (208)
T 3urz_A 86 ---NNVDCLEACAEMQVCRGQEKDALRMYEKILQLE 118 (208)
T ss_dssp ---TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 336899999999999999999999999999764
No 167
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.55 E-value=2.3e-07 Score=71.88 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|+.+..+. +....++..+|.++...|+|++|+..|++++.+.. ....+++++|.+|
T Consensus 18 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~~a~~~ 82 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLD-------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP--------DWGKGYSRKAAAL 82 (118)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHH
Confidence 46888887777776542 34578999999999999999999999999998742 2358899999999
Q ss_pred HhCCCchHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i 304 (372)
...+++++|+.+|++++.+
T Consensus 83 ~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHHHHc
Confidence 9999999999999999876
No 168
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.53 E-value=1.9e-07 Score=71.94 Aligned_cols=86 Identities=13% Similarity=0.045 Sum_probs=71.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
+++..|...++.+..+. +....++..+|.++...|+|++|+..|++++.+... .....++++||.+|
T Consensus 20 ~~~~~A~~~~~~a~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLD-------PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED------EYNKDVWAAKADAL 86 (112)
T ss_dssp CCHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC------TTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhC-------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc------cchHHHHHHHHHHH
Confidence 57788877777776542 345789999999999999999999999999987322 11468999999999
Q ss_pred HhC-CCchHHHHHHHHHHHH
Q 017388 286 EIG-SKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~~-~~~~eAi~~~ekAl~i 304 (372)
... +++++|+.+|++++..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGG
T ss_pred HHHhCCHHHHHHHHHHHhhc
Confidence 999 9999999999988754
No 169
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.53 E-value=4.4e-07 Score=68.10 Aligned_cols=68 Identities=24% Similarity=0.251 Sum_probs=60.7
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+..+.++..+|.++...++|++|+..|++++.+.. ..+.+|++||.+|...+++++|+.+|++++.+.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 35688999999999999999999999999998732 235889999999999999999999999999873
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.53 E-value=2.3e-06 Score=72.81 Aligned_cols=101 Identities=23% Similarity=0.324 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
+..++.+|..++..|+|++|+.+|.+++.+. |....+++.+|.+|+...
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~l~~~~----------------------- 92 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLR--------GENAELYAALATVLYYQA----------------------- 92 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------CSCHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHhc-----------------------
Confidence 4578899999999999999999999999984 777889999999954320
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChH--HHHHHHHHHHHHHHH
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDL--DLAWKMLDVARAIAE 223 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl--~~Awe~Le~Ar~I~e 223 (372)
+++ +.|..+|+.++.+
T Consensus 93 ------------------------------------------------------------~~~~~~~A~~~~~~al~~-- 110 (177)
T 2e2e_A 93 ------------------------------------------------------------SQHMTAQTRAMIDKALAL-- 110 (177)
T ss_dssp ------------------------------------------------------------TTCCCHHHHHHHHHHHHH--
T ss_pred ------------------------------------------------------------CCcchHHHHHHHHHHHHh--
Confidence 123 5666667666654
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
.+....++..||.++...|+|++|+..|++++.+..
T Consensus 111 -----~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 111 -----DSNEITALMLLASDAFMQANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred -----CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Confidence 234578999999999999999999999999998753
No 171
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.51 E-value=3.5e-07 Score=73.53 Aligned_cols=90 Identities=12% Similarity=0.035 Sum_probs=72.3
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCccccccccCCCC
Q 017388 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (372)
Q Consensus 78 ~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d~~~~~~~~~e~ 157 (372)
.+|+|++|+.+|.+|+++ +...|..+.+|+.+|.+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~------------------------------------ 40 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTL------------------------------------ 40 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHT------------------------------------
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHc------------------------------------
Confidence 478999999999999985 222599999999999999955
Q ss_pred CcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Q 017388 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILS 237 (372)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~ 237 (372)
++++.|...|+.|+.+. +....++.
T Consensus 41 ------------------------------------------------~~~~~A~~~~~~al~~~-------p~~~~~~~ 65 (117)
T 3k9i_A 41 ------------------------------------------------GEYRKAEAVLANGVKQF-------PNHQALRV 65 (117)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHHHC-------TTCHHHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHhC-------CCchHHHH
Confidence 26777888788777652 44588999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 238 ALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 238 ~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
+||.++...|+|++|+..|+++|.+.
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999875
No 172
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.49 E-value=2.7e-06 Score=84.92 Aligned_cols=164 Identities=16% Similarity=0.087 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCC
Q 017388 65 FADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQ 140 (372)
Q Consensus 65 ~a~~L~~~G~~~~~----~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~ 140 (372)
.+..++.+|..++. .+++++|+.+|.+|++. ..+.+++.+|..++.- .+|.++.
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~----------~~~~a~~~Lg~~y~~g----~g~~~~~-------- 95 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ----------GYTPAEYVLGLRYMNG----EGVPQDY-------- 95 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHT----SSSCCCH--------
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHcC----CCCCCCH--------
Confidence 35678899999998 99999999999999874 2367999999888752 0111110
Q ss_pred CCCCCcccc---ccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHH
Q 017388 141 QGSDKDDSV---KNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (372)
Q Consensus 141 ~~~~~d~~~---~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~ 217 (372)
+... ..........+. -.... .. ........+++.|...|+.
T Consensus 96 -----~~A~~~~~~a~~~~~~~a~--~~Lg~---~y-------------------------~~g~g~~~~~~~A~~~~~~ 140 (490)
T 2xm6_A 96 -----AQAVIWYKKAALKGLPQAQ--QNLGV---MY-------------------------HEGNGVKVDKAESVKWFRL 140 (490)
T ss_dssp -----HHHHHHHHHHHHTTCHHHH--HHHHH---HH-------------------------HHTSSSCCCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHCCCHHHH--HHHHH---HH-------------------------HcCCCCCCCHHHHHHHHHH
Confidence 0000 000000000000 00000 00 0000113467777777777
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----CC
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GS 289 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~----~~ 289 (372)
|... ..+.++.+||.++.. .+++++|+..|+++++. . .+.++++||.+|.. .+
T Consensus 141 a~~~---------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~---~~~a~~~Lg~~y~~g~g~~~ 201 (490)
T 2xm6_A 141 AAEQ---------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------G---NVWSCNQLGYMYSRGLGVER 201 (490)
T ss_dssp HHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCC
T ss_pred HHHC---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHhcCCCCCc
Confidence 6431 357899999999998 88999999999999874 1 26899999999998 89
Q ss_pred CchHHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISV 304 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i 304 (372)
++++|+.+|++|+..
T Consensus 202 ~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 202 NDAISAQWYRKSATS 216 (490)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC
Confidence 999999999999875
No 173
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.48 E-value=2.7e-06 Score=84.93 Aligned_cols=80 Identities=13% Similarity=0.007 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
+++.|..+|..|... ..+.++.+||.++.. .+++++|+..|++|+..- .+.++++||
T Consensus 346 ~~~~A~~~~~~a~~~---------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~----------~~~a~~~Lg 406 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK---------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG----------LSAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----------CHHHHHHHH
T ss_pred cHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC----------CHHHHHHHH
Confidence 555565555555432 347899999999999 899999999999998731 268999999
Q ss_pred HHHHh----CCCchHHHHHHHHHHHHH
Q 017388 283 LCLEI----GSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 283 ~a~~~----~~~~~eAi~~~ekAl~i~ 305 (372)
.+|.. .+++++|+.+|++|+..-
T Consensus 407 ~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 407 EIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999 899999999999999986
No 174
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.41 E-value=7.3e-07 Score=90.31 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=76.7
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a 284 (372)
.++++.|...|+.|+.+ .+..+.+|.+||.++..+|+|++|+.+|++||++ +|..+.+|++||.+
T Consensus 19 ~g~~~~A~~~~~~Al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 19 AKDYENAIKFYSQAIEL-------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL--------DKKYIKGYYRRAAS 83 (477)
T ss_dssp TTCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHH
Confidence 46899999999888876 2456899999999999999999999999999998 34457899999999
Q ss_pred HHhCCCchHHHHHHHHHHHHH
Q 017388 285 LEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i~ 305 (372)
|..+|++++|+.+|++|+.+.
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999874
No 175
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.41 E-value=7.5e-08 Score=75.02 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
.+..++.+|..++..|+|++|+.+|.+|+.+ .|..+.+|+++|.+++.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 51 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKL----------------------- 51 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHh-----------------------
Confidence 4678899999999999999999999999998 688899999999999965
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++++.|...++.++.+.-.
T Consensus 52 -------------------------------------------------------------g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 52 -------------------------------------------------------------GEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHTSCSS
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHhCCC
Confidence 2566676666666654211
Q ss_pred hcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 017388 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQK 258 (372)
Q Consensus 225 ~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~ 258 (372)
.. .....+.++..+|.++...|+++.|+..|++
T Consensus 71 ~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 71 AE-HVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp TT-SHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 10 0112488999999999999988888766553
No 176
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.29 E-value=3.5e-06 Score=66.02 Aligned_cols=86 Identities=23% Similarity=0.243 Sum_probs=71.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|..+++.+..+ .+....++..+|.++...++|++|+..|++++.+. +....+++.+|.+|
T Consensus 15 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~ 79 (136)
T 2fo7_A 15 GDYDEAIEYYQKALEL-------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PRSAEAWYNLGNAY 79 (136)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHc-------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC--------CCchHHHHHHHHHH
Confidence 3677887777776654 23357889999999999999999999999999863 22357899999999
Q ss_pred HhCCCchHHHHHHHHHHHHHH
Q 017388 286 EIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~ 306 (372)
...+++++|+.+|++++.+..
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHCT
T ss_pred HHhcCHHHHHHHHHHHHHhCC
Confidence 999999999999999998654
No 177
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.29 E-value=7.3e-07 Score=85.94 Aligned_cols=96 Identities=16% Similarity=0.041 Sum_probs=71.8
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcC--CC--------ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh
Q 017388 204 DESDLDLAWKMLDVARAIAEKHWG--DS--------MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH 273 (372)
Q Consensus 204 d~~dl~~Awe~Le~Ar~I~ek~~~--~~--------~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~ 273 (372)
..+++..|...|..|+.+...... .. .....+|++||.+++.+++|++|+.+|+++|.+.. .
T Consensus 191 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~ 262 (338)
T 2if4_A 191 KEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE--------K 262 (338)
T ss_dssp SSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT--------T
T ss_pred hcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------C
Confidence 346777777777777765422110 00 00124999999999999999999999999998742 3
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
.+.+||++|.+|...++|++|+.+|++|+.+...
T Consensus 263 ~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~ 296 (338)
T 2if4_A 263 NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD 296 (338)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 4689999999999999999999999999987543
No 178
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.23 E-value=5.2e-06 Score=83.01 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERE-----DIETSLSDYQKALTILERMVEPDSRHIAELNFR 280 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~-----~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~ 280 (372)
+++..|+.+|+.|.. ...+.++++||.++. .| ++++|+..|++|+ . . .+.++++
T Consensus 265 ~d~~~A~~~~~~Aa~---------~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~-----g---~~~A~~~ 323 (452)
T 3e4b_A 265 GDVEQMMKYLDNGRA---------ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---G-----R---EVAADYY 323 (452)
T ss_dssp CCHHHHHHHHHHHHH---------TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---T-----T---CHHHHHH
T ss_pred CCHHHHHHHHHHHHH---------CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---C-----C---CHHHHHH
Confidence 467777766666552 235889999999998 55 9999999999888 1 2 2589999
Q ss_pred HHHHHHh----CCCchHHHHHHHHHHHH
Q 017388 281 ICLCLEI----GSKPQEAIPYCQKAISV 304 (372)
Q Consensus 281 Lg~a~~~----~~~~~eAi~~~ekAl~i 304 (372)
||.+|.. ..++++|+.+|++|.+.
T Consensus 324 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 324 LGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 9999988 34899999999999873
No 179
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.23 E-value=7.6e-06 Score=65.42 Aligned_cols=72 Identities=13% Similarity=0.020 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+.-++.||.++...++|..|+..|++||.....-.. .....+.+|++||.||...|+++.|+.++++|+.+-
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 455679999999999999999999999988753321 123567999999999999999999999999999874
No 180
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.21 E-value=3.1e-06 Score=65.09 Aligned_cols=63 Identities=16% Similarity=0.075 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHH-HHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE-LNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 236 ~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe-~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
...+|.+++..|+|++|+..|++++.+.. ..+. +|+++|.+|...+++++|+.+|++++.+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEP--------VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCS--------STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC--------CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 45789999999999999999999998732 2346 999999999999999999999999998753
No 181
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.20 E-value=2.5e-05 Score=78.76 Aligned_cols=163 Identities=10% Similarity=-0.003 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhH-HHHHHHHHHHHHHhhhhhcC--cccCCCCccCCCCCCCC
Q 017388 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALEC-VNAYYQYGRALLYKAQEEAD--PLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~-A~~y~~yG~ALl~~ar~es~--vLg~~~~~~~e~~~~~~ 144 (372)
-++..|..+...|++++|..+|.+|+++ .|.. +.+|+.||..+...++.+.. +|..+.+.
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~--------- 385 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAI--------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED--------- 385 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHS--------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCc--------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---------
Confidence 4556777778889999999999999986 3443 46888999888766544321 11110000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHH------HHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWK------MLDVA 218 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe------~Le~A 218 (372)
.+. ...-.+..||- .++.|
T Consensus 386 ----------------------------~~~---------------------------~~~~~~~~a~~~~~~~~~~~~A 410 (530)
T 2ooe_A 386 ----------------------------ART---------------------------RHHVYVTAALMEYYCSKDKSVA 410 (530)
T ss_dssp ----------------------------TTC---------------------------CTHHHHHHHHHHHHHTCCHHHH
T ss_pred ----------------------------cCC---------------------------chHHHHHHHHHHHHHcCChhHH
Confidence 000 00001222221 13567
Q ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhCCCchHHHHH
Q 017388 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIGSKPQEAIPY 297 (372)
Q Consensus 219 r~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r-~iAe~~~~Lg~a~~~~~~~~eAi~~ 297 (372)
+.+|++.+...+..+.++..+|.+....|+++.|...|++|+... +.++ .....|..........|+++.+..+
T Consensus 411 ~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~-----~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~ 485 (530)
T 2ooe_A 411 FKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG-----SLPPEKSGEIWARFLAFESNIGDLASILKV 485 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSC-----CSCGGGCHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 777776655445556777777777777777777777777777642 2222 2345666666666667777777777
Q ss_pred HHHHHHHHHH
Q 017388 298 CQKAISVCKS 307 (372)
Q Consensus 298 ~ekAl~i~~~ 307 (372)
+++++..+..
T Consensus 486 ~~r~~~~~p~ 495 (530)
T 2ooe_A 486 EKRRFTAFRE 495 (530)
T ss_dssp HHHHHHHTHH
T ss_pred HHHHHHHCch
Confidence 7777777764
No 182
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.18 E-value=4.8e-06 Score=74.50 Aligned_cols=90 Identities=10% Similarity=0.028 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
++++.|...|+.++..+- ..+....+++.||.++...|+|++|+..|++++.+. |+++.+..++|.+|.+|
T Consensus 18 g~~~~A~~~~~~~~~~~p----~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----P~~~~~~~a~~~~g~~~ 88 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYP----FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-----PTHPNIDYVMYMRGLTN 88 (225)
T ss_dssp TCHHHHHHHHHHHHHHCT----TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-----cCCCcHHHHHHHHHHHH
Confidence 577777777777665431 124567899999999999999999999999999864 46677888999999998
Q ss_pred Hh------------------CCCchHHHHHHHHHHHH
Q 017388 286 EI------------------GSKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~------------------~~~~~eAi~~~ekAl~i 304 (372)
.. .+++++|+.+|+++|..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 125 (225)
T 2yhc_A 89 MALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG 125 (225)
T ss_dssp HHHHC--------------CCHHHHHHHHHHHHHHTT
T ss_pred HhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH
Confidence 75 57899999999999864
No 183
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.17 E-value=1.5e-05 Score=63.19 Aligned_cols=53 Identities=13% Similarity=0.057 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l 266 (372)
+++.|..+|+.++.+. +..+.+|..||.++...|+|++|+..|++++.+....
T Consensus 34 ~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 34 QFDAALPHLRAALDFD-------PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp CHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 5677777777777652 4568899999999999999999999999999998754
No 184
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.15 E-value=6.2e-05 Score=74.55 Aligned_cols=141 Identities=13% Similarity=0.032 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCC
Q 017388 66 ADELMEKGTNALKESD---YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (372)
Q Consensus 66 a~~L~~~G~~~~~~gd---y~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~ 142 (372)
|-.++-+|..++..++ +.+|+.+|.+|+++ .|..+.+|-.++.+++-.... . +.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l--------DP~~a~A~A~la~a~~~~~~~--~-----~~-------- 252 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS--------SPEFTYARAEKALVDIVRHSQ--H-----PL-------- 252 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH--S-----CC--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhcc--C-----CC--------
Confidence 5677788888887654 58999999999999 799999999888888833111 0 00
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
+. ..+..+..++...
T Consensus 253 ---------------------------------------------------------------~~--~~~~~l~~a~~a~ 267 (372)
T 3ly7_A 253 ---------------------------------------------------------------DE--KQLAALNTEIDNI 267 (372)
T ss_dssp ---------------------------------------------------------------CH--HHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ch--hhHHHHHHHHHHH
Confidence 00 0112233333321
Q ss_pred HHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 223 ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
......+..+.+|..+|.+++-.|++++|+..+++||.+. + + +.+|..+|.++.+.|++++|+++|.+|+
T Consensus 268 -~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln-----~-s---~~a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 268 -VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE-----M-S---WLNYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp -HTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC-----C-C---HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1222235678999999999999999999999999999995 1 1 5788899999999999999999999999
Q ss_pred HH
Q 017388 303 SV 304 (372)
Q Consensus 303 ~i 304 (372)
.+
T Consensus 338 rL 339 (372)
T 3ly7_A 338 NL 339 (372)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.15 E-value=1.2e-05 Score=67.34 Aligned_cols=75 Identities=13% Similarity=0.107 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017388 211 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (372)
Q Consensus 211 Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~ 286 (372)
|+..|+.|... ..+.++++||.+|.. ..++.+|+..|++|.+. ..+.++++||.+|.
T Consensus 44 A~~~~~~Aa~~---------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 44 LFQYLSKACEL---------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----------NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHHHT---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----------CCHHHHHHHHHHHH
Confidence 66666666532 357899999999999 89999999999999864 13689999999999
Q ss_pred h----CCCchHHHHHHHHHHHH
Q 017388 287 I----GSKPQEAIPYCQKAISV 304 (372)
Q Consensus 287 ~----~~~~~eAi~~~ekAl~i 304 (372)
. .+++++|+.+|++|.+.
T Consensus 105 ~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 105 AGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCHHHHHHHHHHHHHC
Confidence 9 89999999999999874
No 186
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.13 E-value=2.1e-05 Score=78.54 Aligned_cols=77 Identities=18% Similarity=0.091 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----
Q 017388 216 DVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI---- 287 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~~A~~~~~LGev~~e----~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~---- 287 (372)
+.|+..|.+.. +..+.++++||.+|.. ..++++|+..|++|.+. .+ +.++++||.+|..
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~~A~~~Lg~~y~~G~g~ 370 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN-------GQ---NSADFAIAQLFSQGKGT 370 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT-------TC---TTHHHHHHHHHHSCTTB
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh-------Ch---HHHHHHHHHHHHhCCCC
Confidence 33444444444 3568999999999988 44999999999999862 22 5899999999986
Q ss_pred CCCchHHHHHHHHHHHHH
Q 017388 288 GSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 288 ~~~~~eAi~~~ekAl~i~ 305 (372)
..++.+|+.+|++|...-
T Consensus 371 ~~d~~~A~~~~~~A~~~g 388 (452)
T 3e4b_A 371 KPDPLNAYVFSQLAKAQD 388 (452)
T ss_dssp CCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHCC
Confidence 458999999999998763
No 187
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.12 E-value=1.8e-05 Score=79.71 Aligned_cols=85 Identities=9% Similarity=0.008 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhcCCCcc-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH-HHhCCCch
Q 017388 215 LDVARAIAEKHWGDSME-KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC-LEIGSKPQ 292 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~-~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a-~~~~~~~~ 292 (372)
++.|+.+|++.+...+. ...+|..+|.+....|+++.|+..|++|+.+ ++.+ ...|...+.. |...|+++
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~-----~~~~---~~~~~~~a~~~~~~~~~~~ 408 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-----ARTR---HHVYVTAALMEYYCSKDKS 408 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----TTCC---THHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----cCCc---hHHHHHHHHHHHHHcCChh
Confidence 57788888887654443 3468888888888888888888888888764 2222 2334444433 45688888
Q ss_pred HHHHHHHHHHHHHHH
Q 017388 293 EAIPYCQKAISVCKS 307 (372)
Q Consensus 293 eAi~~~ekAl~i~~~ 307 (372)
+|+..|+++|.+...
T Consensus 409 ~A~~~~e~al~~~p~ 423 (530)
T 2ooe_A 409 VAFKIFELGLKKYGD 423 (530)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCC
Confidence 888888888888754
No 188
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.06 E-value=3.9e-05 Score=86.92 Aligned_cols=163 Identities=18% Similarity=0.068 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCC
Q 017388 64 EFADELMEKGTNALK-ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~-~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~ 142 (372)
++|..++.++..+.. .+-+-+++..|.+|.++..+. ....+|+.||++++..++.+.++-.. ..+
T Consensus 1066 EEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aerv------n~p~vWsqLAKAql~~G~~kEAIdsY--iKA------ 1131 (1630)
T 1xi4_A 1066 EEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERC------NEPAVWSQLAKAQLQKGMVKEAIDSY--IKA------ 1131 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhc------CCHHHHHHHHHHHHhCCCHHHHHHHH--Hhc------
Confidence 567677766654444 345555555555555554332 34678999999999888765443221 000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 017388 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (372)
Q Consensus 143 ~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ 222 (372)
.+.+. . -+....-...++++.|.++|.+||.+-
T Consensus 1132 --dD~sa----------------y-----------------------------~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1132 --DDPSS----------------Y-----------------------------MEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred --CChHH----------------H-----------------------------HHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 00000 0 000011123467888888888877322
Q ss_pred -------------HHhcC--------CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017388 223 -------------EKHWG--------DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRI 281 (372)
Q Consensus 223 -------------ek~~~--------~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~L 281 (372)
.|... ..+..+ .+..+|..+...|+|+.|+..|.+| ..|.+|
T Consensus 1165 ~e~~Idt~LafaYAKl~rleele~fI~~~n~a-d~~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rL 1227 (1630)
T 1xi4_A 1165 RESYVETELIFALAKTNRLAELEEFINGPNNA-HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRL 1227 (1630)
T ss_pred ccccccHHHHHHHHhhcCHHHHHHHHhCCCHH-HHHHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHH
Confidence 22100 023344 4557999999999999999999985 478999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHH
Q 017388 282 CLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 282 g~a~~~~~~~~eAi~~~ekAl~i 304 (372)
|.+|.++|+|++|++.|++|...
T Consensus 1228 A~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1228 ASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHhCCHHHHHHHHHHhCCH
Confidence 99999999999999999998665
No 189
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.04 E-value=3.8e-06 Score=72.13 Aligned_cols=91 Identities=13% Similarity=0.069 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--------------HhcCC-----------
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE--------------RMVEP----------- 269 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~--------------~l~~~----------- 269 (372)
++.|..+|++.+...|..+.+|..||.+++..|+|++|+..|++++.+.. .....
T Consensus 22 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al 101 (176)
T 2r5s_A 22 HAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQEL 101 (176)
T ss_dssp HHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 34555566555444466789999999999999999999999988754310 00111
Q ss_pred -CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 270 -DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 270 -~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.+|.-..+|++||.+|...|++++|+.+|++++.+-
T Consensus 102 ~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 102 AANPDNFELACELAVQYNQVGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 134457899999999999999999999999998764
No 190
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.03 E-value=7.4e-05 Score=55.57 Aligned_cols=49 Identities=31% Similarity=0.497 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHh
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
.+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~ 56 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ 56 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999987 577889999999999854
No 191
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.99 E-value=4.4e-05 Score=66.54 Aligned_cols=99 Identities=10% Similarity=0.018 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhC
Q 017388 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALERE---DIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIG 288 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~---~y~~Al~~y~~AL~I~~~l~~~~~r-~iAe~~~~Lg~a~~~~ 288 (372)
+.+..++..|.+.....+...++.+++|..++.+. ++.+++..|+..++.- +| .-.+++|+||++|.+.
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHc
Confidence 34666777776664433457899999999999998 6778888888877743 23 3469999999999999
Q ss_pred CCchHHHHHHHHHHHHHH--HHHHHHHHHHHh
Q 017388 289 SKPQEAIPYCQKAISVCK--SRVQRLLNEVKS 318 (372)
Q Consensus 289 ~~~~eAi~~~ekAl~i~~--~rl~~l~~~~~~ 318 (372)
++|++|+.+|+++|++-. .....|++.++.
T Consensus 85 ~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 999999999999999865 334444444443
No 192
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.91 E-value=1.9e-05 Score=73.82 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=68.0
Q ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH---------------------------HHHhcC
Q 017388 216 DVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI---------------------------LERMVE 268 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I---------------------------~~~l~~ 268 (372)
+.|..+|++.+...|.-+.++..||.+++..|+|++|+..|++++.+ .++.+
T Consensus 134 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al- 212 (287)
T 3qou_A 134 TDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQV- 212 (287)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHH-
Confidence 44455555544445667899999999999999999999999987441 11111
Q ss_pred CCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 269 PDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 269 ~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
..+|.-+.++++||.+|...|++++|+.+|++++.+-
T Consensus 213 ~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 213 AENPEDAALATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 0134456899999999999999999999999999873
No 193
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.86 E-value=0.00033 Score=67.29 Aligned_cols=88 Identities=11% Similarity=0.086 Sum_probs=70.3
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALER-----EDIETSLSDYQKALTILERMVEPDSRHIAELNF 279 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~-----~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~ 279 (372)
...+..|..++++|+.| ++.-.-..+|..||-+|... |+.+.|..+|++||.|-.... ..+++
T Consensus 176 l~~l~~A~a~lerAleL-----DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~-------id~~v 243 (301)
T 3u64_A 176 PDTVHAAVMMLERACDL-----WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD-------PDHHI 243 (301)
T ss_dssp HHHHHHHHHHHHHHHHH-----CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC-------SHHHH
T ss_pred HHhHHHHHHHHHHHHHh-----CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC-------chHHH
Confidence 34666777777777765 22223567999999999994 999999999999999975321 38889
Q ss_pred HHHHHHHhC-CCchHHHHHHHHHHHH
Q 017388 280 RICLCLEIG-SKPQEAIPYCQKAISV 304 (372)
Q Consensus 280 ~Lg~a~~~~-~~~~eAi~~~ekAl~i 304 (372)
-.|..|... ++++.|..++++||.+
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 999999885 9999999999999874
No 194
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.79 E-value=0.00023 Score=55.56 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHh
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
+..++.+|..++..|+|++|+.+|.+|+++ .|....+|+.+|.+++.+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~ 54 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERL 54 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc
Confidence 456889999999999999999999999998 688899999999999865
No 195
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.71 E-value=0.00029 Score=73.07 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=115.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccC
Q 017388 59 REKTVEFADELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~-eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~ 137 (372)
..+.+.....++.........|+|. +|+.+|.+++++ .|+...+|+.-|.+|..+++...
T Consensus 21 ~~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~----------- 81 (567)
T 1dce_A 21 REQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKS----------- 81 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccc-----------
Confidence 3444555567777777778888775 669999999999 79999999999999998742100
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHH
Q 017388 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (372)
Q Consensus 138 e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~ 217 (372)
. +.....++.|.+.++.
T Consensus 82 ---------------------------~------------------------------------~~~~~~~~~eL~~~~~ 98 (567)
T 1dce_A 82 ---------------------------P------------------------------------EESAALVKAELGFLES 98 (567)
T ss_dssp ---------------------------H------------------------------------HHHHHHHHHHHHHHHH
T ss_pred ---------------------------h------------------------------------hhhhhhHHHHHHHHHH
Confidence 0 0001245555555555
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCC-CchHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS-KPQEA 294 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~--~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~-~~~eA 294 (372)
+.. ..++-..+|...|.+....+ +|++|+.+|.++|++.... ..+|+..|.++...+ .++++
T Consensus 99 ~l~-------~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N--------~~aW~~R~~~l~~l~~~~~~e 163 (567)
T 1dce_A 99 CLR-------VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN--------FHCWDYRRFVAAQAAVAPAEE 163 (567)
T ss_dssp HHH-------HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHTCCCHHHH
T ss_pred HHH-------hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc--------ccHHHHHHHHHHHcCCChHHH
Confidence 543 34667899999999999999 7799999999999986554 489999999999999 89999
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
+.++.++|.+-
T Consensus 164 l~~~~~~I~~~ 174 (567)
T 1dce_A 164 LAFTDSLITRN 174 (567)
T ss_dssp HHHHHTTTTTT
T ss_pred HHHHHHHHHHC
Confidence 99999998654
No 196
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.56 E-value=0.0008 Score=76.44 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----------------hcCCCChhHHHH
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER-----------------MVEPDSRHIAEL 277 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~-----------------l~~~~~r~iAe~ 277 (372)
++.|+.+|.+ |..|..||.+++..|+|+.|++.|++|.....= .++-+-..-++.
T Consensus 1211 YeeA~~~Y~k--------A~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~de 1282 (1630)
T 1xi4_A 1211 YDAAKLLYNN--------VSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADE 1282 (1630)
T ss_pred HHHHHHHHHh--------hhHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHH
Confidence 4555556554 457899999999999999999999999776530 111111123456
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 278 NFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 278 ~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
+..++..|...|.|++||.+|+++|.+=++++
T Consensus 1283 Leeli~yYe~~G~feEAI~LlE~aL~LeraH~ 1314 (1630)
T 1xi4_A 1283 LEELINYYQDRGYFEELITMLEAALGLERAHM 1314 (1630)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccChhHh
Confidence 77899999999999999999999976544443
No 197
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.54 E-value=5.4e-05 Score=57.97 Aligned_cols=76 Identities=17% Similarity=0.200 Sum_probs=52.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVD-ILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~-~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a 284 (372)
++++.|...++.+..+ .+.... +|..+|.++...|+|++|+..|+++|.+... + ..++++
T Consensus 14 ~~~~~A~~~~~~al~~-------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-----~---~~~~~~---- 74 (99)
T 2kc7_A 14 GDIENALQALEEFLQT-------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD-----S---PALQAR---- 74 (99)
T ss_dssp TCHHHHHHHHHHHHHH-------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-----S---THHHHH----
T ss_pred CCHHHHHHHHHHHHHH-------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-----c---HHHHHH----
Confidence 4566666666665543 345567 9999999999999999999999999988532 2 234432
Q ss_pred HHhCCCchHHHHHHHHHHHH
Q 017388 285 LEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i 304 (372)
+.+.+|+.+|++++.+
T Consensus 75 ----~~~~~a~~~~~~~~~~ 90 (99)
T 2kc7_A 75 ----KMVMDILNFYNKDMYN 90 (99)
T ss_dssp ----HHHHHHHHHHCCTTHH
T ss_pred ----HHHHHHHHHHHHHhcc
Confidence 4455666666665544
No 198
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.52 E-value=0.0019 Score=62.01 Aligned_cols=136 Identities=8% Similarity=-0.067 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 65 FADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy-~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
.-..+++.-+..+..|.| ++|+.++.++|.+ .|+...+++.-|.+|..+++
T Consensus 31 ~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~--------nP~~~taWn~R~~~L~~l~~-------------------- 82 (306)
T 3dra_A 31 DYKQIMGLLLALMKAEEYSERALHITELGINE--------LASHYTIWIYRFNILKNLPN-------------------- 82 (306)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCTT--------------------
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CcHHHHHHHHHHHHHHHccc--------------------
Confidence 345677777778888888 5899999999999 79999999999999985520
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
.+++.++.+++.++.+
T Consensus 83 --------------------------------------------------------------~~~~eeL~~~~~~L~~-- 98 (306)
T 3dra_A 83 --------------------------------------------------------------RNLYDELDWCEEIALD-- 98 (306)
T ss_dssp --------------------------------------------------------------SCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHH--
Confidence 1466666666665543
Q ss_pred HhcCCCccHHHHHHHHHHHH----Hhc---CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCch--HH
Q 017388 224 KHWGDSMEKVDILSALAEVA----LER---EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--EA 294 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~----~e~---~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~--eA 294 (372)
.|+...+++..+.+. ... +++.+++..+.++|.+..+.+ .+++..+.++...+.++ ++
T Consensus 99 -----nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny--------~aW~~R~~vl~~l~~~~~~~E 165 (306)
T 3dra_A 99 -----NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH--------HVWSYRKWLVDTFDLHNDAKE 165 (306)
T ss_dssp -----CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCTTCHHH
T ss_pred -----CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhcccChHHH
Confidence 244566777777777 555 799999999999998866554 89999999999999999 99
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
+.++.++|.+-
T Consensus 166 L~~~~~~i~~d 176 (306)
T 3dra_A 166 LSFVDKVIDTD 176 (306)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999754
No 199
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.49 E-value=0.0008 Score=59.34 Aligned_cols=95 Identities=12% Similarity=0.176 Sum_probs=72.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-------------
Q 017388 206 SDLDLAWKMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD------------- 270 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~------------- 270 (372)
+-|+.|.-...++..+.....+ .....++++..+|+.++..++|..|+..|++||.+++.+.-..
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p 113 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTP 113 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCc
Confidence 4567777777777777655433 2345789999999999999999999999999999999653221
Q ss_pred ----ChhHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 017388 271 ----SRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (372)
Q Consensus 271 ----~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ek 300 (372)
-+.-+++-|+|+.||...+++++||...+.
T Consensus 114 ~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 114 QSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 112247889999999999999999887543
No 200
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.42 E-value=5.5e-05 Score=76.68 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 234 DILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 234 ~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
.++..+|+.+.+.|+|+.|+..|.++ ..|.+||.||.++|+|++|+..|++|..+
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp --------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 38999999999999999999999966 45788999999999999999999998543
No 201
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.0012 Score=62.84 Aligned_cols=52 Identities=13% Similarity=-0.082 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCC-cc-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDS-ME-KVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~-~~-~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
++++.|...|+.+. .+.. +. ..++++.+|.++..+|++++|+..|++++.+.
T Consensus 185 G~~~eAl~~l~~a~------~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 185 ALFTEAERRLTEAN------DSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTH 238 (282)
T ss_dssp TCHHHHHHHHHHHH------TSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHh------cCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 45555555555443 1222 44 77899999999999999999999999999975
No 202
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.31 E-value=0.00083 Score=69.63 Aligned_cols=135 Identities=7% Similarity=-0.123 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Q 017388 66 ADELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKK 135 (372)
Q Consensus 66 a~~L~~~G~~~~~~gd----------y~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~ 135 (372)
......+|..+...|+ |.+|+.+|.+++++ +|.+..+|+.-|.+|..+++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--------~pK~y~aW~hR~w~l~~l~~------------ 122 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLPE------------ 122 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCSS------------
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccc------------
Confidence 3456778888888888 99999999999987 79999999999999885410
Q ss_pred cCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHH
Q 017388 136 EGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKML 215 (372)
Q Consensus 136 ~~e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~L 215 (372)
.+++.|++.+
T Consensus 123 ----------------------------------------------------------------------~~~~~el~~~ 132 (567)
T 1dce_A 123 ----------------------------------------------------------------------PNWARELELC 132 (567)
T ss_dssp ----------------------------------------------------------------------CCHHHHHHHH
T ss_pred ----------------------------------------------------------------------ccHHHHHHHH
Confidence 1355566656
Q ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC------
Q 017388 216 DVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------ 288 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~-~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~------ 288 (372)
+.+..+ .++-..+|...|.+....+ .|++++.++.+++.+. +.-..+|+.+|.++...
T Consensus 133 ~k~l~~-------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~--------p~n~saW~~r~~ll~~l~~~~~~ 197 (567)
T 1dce_A 133 ARFLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRN--------FSNYSSWHYRSCLLPQLHPQPDS 197 (567)
T ss_dssp HHHHHH-------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTT--------CCCHHHHHHHHHHHHHHSCCCCS
T ss_pred HHHHhh-------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHhhcccccc
Confidence 655554 3456788999999999999 9999999999998763 33458999999998874
Q ss_pred --------CCchHHHHHHHHHHHHH
Q 017388 289 --------SKPQEAIPYCQKAISVC 305 (372)
Q Consensus 289 --------~~~~eAi~~~ekAl~i~ 305 (372)
+++++|+++|.+||.+.
T Consensus 198 ~~~~~~~~~~~~eel~~~~~ai~~~ 222 (567)
T 1dce_A 198 GPQGRLPENVLLKELELVQNAFFTD 222 (567)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccHHHHHHHHHHHHHHHhhC
Confidence 45799999999999764
No 203
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.29 E-value=0.00044 Score=54.60 Aligned_cols=66 Identities=17% Similarity=-0.060 Sum_probs=56.9
Q ss_pred ccHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.-++++..+|.+++-.++ .++|...|++||.+-... ..+++.||..+...|+|++|+.+|++.+.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~--------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN--------EAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3457889999999986666 799999999999985443 58899999999999999999999998875
No 204
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.27 E-value=0.0054 Score=59.60 Aligned_cols=143 Identities=10% Similarity=0.028 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 65 FADELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~-eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
.-..+...-......|.|. +|+.++.+++.+ .|+...+++.=|.+|..+++.. + |
T Consensus 28 ~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~--------nP~~ytaWn~Rr~iL~~l~~~~----~--~---------- 83 (331)
T 3dss_A 28 LYQSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEK----S--P---------- 83 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHHHHS----C--H----------
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHHhcccc----c--c----------
Confidence 3344555555666788888 799999999998 7999999999999998775320 0 0
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
++....+..++.+++.++.
T Consensus 84 ----------------------------------------------------------~~~~~~l~~EL~~~~~~L~--- 102 (331)
T 3dss_A 84 ----------------------------------------------------------EESAALVKAELGFLESCLR--- 102 (331)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHHHHHHHH---
T ss_pred ----------------------------------------------------------hhhhHHHHHHHHHHHHHHH---
Confidence 0001235555555555543
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC-chHHHHHHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK-PQEAIPYCQK 300 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~--~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~-~~eAi~~~ek 300 (372)
..|+-..++...+.+....+ .|++++..+.++|.+..+.+ .+++..+.++...+. +++++.++.+
T Consensus 103 ----~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy--------~AW~~R~~vl~~l~~~~~eel~~~~~ 170 (331)
T 3dss_A 103 ----VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--------HCWDYRRFVAAQAAVAPAEELAFTDS 170 (331)
T ss_dssp ----HCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ----hCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 34567889999999999988 49999999999999865554 889999999999998 5999999999
Q ss_pred HHHH
Q 017388 301 AISV 304 (372)
Q Consensus 301 Al~i 304 (372)
+|.+
T Consensus 171 ~I~~ 174 (331)
T 3dss_A 171 LITR 174 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 205
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.22 E-value=0.0014 Score=51.93 Aligned_cols=70 Identities=19% Similarity=0.193 Sum_probs=56.7
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017388 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (372)
Q Consensus 205 ~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg 282 (372)
.++|..|...|+.|+..+..........+++|..||.++..+|+|+.|+..|+++|.+. |+|+ .++++++
T Consensus 18 ~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~-----P~~~---~~~~n~~ 87 (104)
T 2v5f_A 18 EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD-----PEHQ---RANGNLK 87 (104)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---HHHHHHH
T ss_pred ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-----CCCH---HHHhhHH
Confidence 36899999999999998865543346789999999999999999999999999999874 3443 4456665
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.19 E-value=0.001 Score=55.33 Aligned_cols=78 Identities=17% Similarity=0.050 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
.|+..|+..|+.|... ++ +.++ ||.++.....+++|+..|++|.+. ..+.++++||.+|
T Consensus 9 ~d~~~A~~~~~~aa~~-----g~----~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-----NE----MFGC--LSLVSNSQINKQKLFQYLSKACEL----------NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHT-----TC----TTHH--HHHHTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-----CC----Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHHHHH
Confidence 4777887777776532 21 1222 999999999999999999999876 1368999999999
Q ss_pred Hh----CCCchHHHHHHHHHHHH
Q 017388 286 EI----GSKPQEAIPYCQKAISV 304 (372)
Q Consensus 286 ~~----~~~~~eAi~~~ekAl~i 304 (372)
.. .+++.+|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 99 88999999999999864
No 207
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.14 E-value=0.0053 Score=58.85 Aligned_cols=140 Identities=8% Similarity=-0.083 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCC
Q 017388 66 ADELMEKGTNALKES--DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (372)
Q Consensus 66 a~~L~~~G~~~~~~g--dy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~ 143 (372)
......+|..+...| +|++|+.++..++.+ +|.+..+++.-|.+|..+... ++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~aW~~R~~iL~~~~~~----l~~------------ 122 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQIWNYRQLIIGQIMEL----NNN------------ 122 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHHHHHHHHHHHHHHHH----TTT------------
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHHHHHHHHHHHHHHHh----ccc------------
Confidence 344678899999999 999999999999998 799999999999999654211 000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 017388 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (372)
Q Consensus 144 ~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~e 223 (372)
..+++.++++++.+..+
T Consensus 123 -------------------------------------------------------------~~~~~~EL~~~~~~l~~-- 139 (306)
T 3dra_A 123 -------------------------------------------------------------DFDPYREFDILEAMLSS-- 139 (306)
T ss_dssp -------------------------------------------------------------CCCTHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------------------cCCHHHHHHHHHHHHHh--
Confidence 01344555555555543
Q ss_pred HhcCCCccHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC------chHHH
Q 017388 224 KHWGDSMEKVDILSALAEVALEREDIE--TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK------PQEAI 295 (372)
Q Consensus 224 k~~~~~~~~A~~~~~LGev~~e~~~y~--~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~------~~eAi 295 (372)
.++-..++...+.+....++|+ +++..+.++|.+.... -.++++.+.++...++ +++++
T Consensus 140 -----~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N--------~sAW~~R~~ll~~l~~~~~~~~~~eEl 206 (306)
T 3dra_A 140 -----DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN--------NSAWSHRFFLLFSKKHLATDNTIDEEL 206 (306)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHSSGGGCCHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHhccccchhhhHHHHH
Confidence 3556788999999999999999 9999999999875544 4899999999999987 89999
Q ss_pred HHHHHHHHHH
Q 017388 296 PYCQKAISVC 305 (372)
Q Consensus 296 ~~~ekAl~i~ 305 (372)
.++.++|.+-
T Consensus 207 ~~~~~aI~~~ 216 (306)
T 3dra_A 207 NYVKDKIVKC 216 (306)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999764
No 208
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.09 E-value=0.0077 Score=50.68 Aligned_cols=106 Identities=10% Similarity=0.055 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHh
Q 017388 209 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEI 287 (372)
Q Consensus 209 ~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r-~iAe~~~~Lg~a~~~ 287 (372)
...-+.|..++.-|.+......-..++.+++|...+.+.+-. +-++.+.|++.++..++| .--+++|.||++|.+
T Consensus 11 ~~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~----d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk 86 (126)
T 1nzn_A 11 LVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYND----DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 86 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHH----HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Confidence 345567788888887764423356799999999999987754 556778888888776645 567999999999999
Q ss_pred CCCchHHHHHHHHHHHHHH--HHHHHHHHHHHh
Q 017388 288 GSKPQEAIPYCQKAISVCK--SRVQRLLNEVKS 318 (372)
Q Consensus 288 ~~~~~eAi~~~ekAl~i~~--~rl~~l~~~~~~ 318 (372)
.|+|+.|+.+++..|.+-. .....|+..|+.
T Consensus 87 lg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 87 LKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999998855 344455544443
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.82 E-value=0.028 Score=54.16 Aligned_cols=171 Identities=10% Similarity=-0.026 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcC--cccCCCCccCCCCCCCC
Q 017388 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEAD--PLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~--vLg~~~~~~~e~~~~~~ 144 (372)
..++-+|.++...|+|++|+.+|.+.++. |+ .+...+++.....+++.++|.+-+ .|-+..
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~----------- 163 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYT----------- 163 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH-----------
Confidence 34568999999999999999999998553 22 247888999999999988765321 010000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH-------HHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM-------LDV 217 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~-------Le~ 217 (372)
+. ++ +.....+.-.-.+..||-. ++.
T Consensus 164 -----------------------~~---~~---------------------d~~~~~d~~l~~Laea~v~l~~g~~~~q~ 196 (310)
T 3mv2_B 164 -----------------------NA---IE---------------------DTVSGDNEMILNLAESYIKFATNKETATS 196 (310)
T ss_dssp -----------------------HH---SC---------------------HHHHHHHHHHHHHHHHHHHHHHTCSTTTH
T ss_pred -----------------------hc---Cc---------------------cccccchHHHHHHHHHHHHHHhCCccHHH
Confidence 00 00 0000000112234445543 345
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC--ChhHHHHHHHHHHHHHhCCCchHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD--SRHIAELNFRICLCLEIGSKPQEAI 295 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~--~r~iAe~~~~Lg~a~~~~~~~~eAi 295 (372)
|..+|+......+........++ +++.+|+|++|...+++.+++...+-..+ .+.-+.++.|+..+....|+ +|.
T Consensus 197 A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~ 273 (310)
T 3mv2_B 197 NFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTE 273 (310)
T ss_dssp HHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTH
T ss_pred HHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHH
Confidence 56667665554444333334444 89999999999999998887764431110 12347889888888888887 777
Q ss_pred HHHHHHHHH
Q 017388 296 PYCQKAISV 304 (372)
Q Consensus 296 ~~~ekAl~i 304 (372)
++++++..+
T Consensus 274 ~l~~qL~~~ 282 (310)
T 3mv2_B 274 DLTNQLVKL 282 (310)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 777666654
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.78 E-value=0.011 Score=46.29 Aligned_cols=64 Identities=14% Similarity=0.027 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017388 209 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (372)
Q Consensus 209 ~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a 284 (372)
..|..+|+.|+. ..+.-..+++.||.+++..|+|.+|+..|++.|... |+ ++....+-..|..+
T Consensus 26 ~~A~~~l~~AL~-------~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~----p~-~~~~~~i~~~I~~A 89 (93)
T 3bee_A 26 DEVSLLLEQALQ-------LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN----DP-NLDRVTIIESINKA 89 (93)
T ss_dssp HHHHHHHHHHHH-------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC----CT-TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC----CC-CccHHHHHHHHHHH
Confidence 345555555554 346779999999999999999999999999998753 33 44444444445444
No 211
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.75 E-value=0.0024 Score=64.65 Aligned_cols=61 Identities=5% Similarity=-0.056 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
..+|..++.++++.|+|+.|..++.. |. .|+ +-+..+...|...|+|++|+.+|+++|.+=
T Consensus 177 ~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~--------~~a---d~l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 177 TRTWKEVCFACVDGKEFRLAQMCGLH-IV--------VHA---DELEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTTTT-TT--------TCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred chhHHHHHHHHHHcCcHHHHHHHHHH-HH--------hCH---hhHHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 45666666777777777777544443 11 122 223357778888888888888888886543
No 212
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.46 E-value=0.012 Score=57.71 Aligned_cols=132 Identities=8% Similarity=-0.023 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCCc
Q 017388 68 ELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy-~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~d 146 (372)
.+++.=+..+..+.| ++|+.++.+++.+ .|+...+++.-|.+|..++
T Consensus 55 ~~~~~~r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~------------------------ 102 (349)
T 3q7a_A 55 DAMDYFRAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLN------------------------ 102 (349)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT------------------------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhh------------------------
Confidence 334444444555544 7899999999999 7999999999999998552
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 017388 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (372)
Q Consensus 147 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~~ 226 (372)
.+++.++.+++.++
T Consensus 103 -----------------------------------------------------------~~l~eEL~~~~~~L------- 116 (349)
T 3q7a_A 103 -----------------------------------------------------------KSLEDELRLMNEFA------- 116 (349)
T ss_dssp -----------------------------------------------------------CCHHHHHHHHHHHH-------
T ss_pred -----------------------------------------------------------hhHHHHHHHHHHHH-------
Confidence 13455555555544
Q ss_pred CCCccHHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCch--------HHHH
Q 017388 227 GDSMEKVDILSALAEVALER-E-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--------EAIP 296 (372)
Q Consensus 227 ~~~~~~A~~~~~LGev~~e~-~-~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~--------eAi~ 296 (372)
...++-..+++..+.+.... + ++++++..+.++|.+..+. -.+++..+.++...++++ +++.
T Consensus 117 ~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN--------y~AW~~R~wvl~~l~~~~~~~~~~~~eELe 188 (349)
T 3q7a_A 117 VQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN--------YHTWAYLHWLYSHFSTLGRISEAQWGSELD 188 (349)
T ss_dssp HTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC--------HHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhccccccchhhHHHHHH
Confidence 23466788899999999888 7 8999999988888754443 488999999999988888 9999
Q ss_pred HHHHHHHHH
Q 017388 297 YCQKAISVC 305 (372)
Q Consensus 297 ~~ekAl~i~ 305 (372)
++.++|.+-
T Consensus 189 ~~~k~I~~d 197 (349)
T 3q7a_A 189 WCNEMLRVD 197 (349)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998764
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.39 E-value=0.034 Score=54.41 Aligned_cols=135 Identities=8% Similarity=-0.110 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCCC
Q 017388 67 DELMEKGTNALKES-DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (372)
Q Consensus 67 ~~L~~~G~~~~~~g-dy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~~ 145 (372)
.....+|..+...| +|++++.++..+|.+ +|.+..+++.-|.+|..+. +.
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~--------nPKny~aW~hR~wlL~~l~-------~~-------------- 139 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQ--------NLKSYQVWHHRLLLLDRIS-------PQ-------------- 139 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHHHHHC-------CS--------------
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhc-------CC--------------
Confidence 34567888888899 599999999999987 7999999999999998661 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 017388 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (372)
Q Consensus 146 d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek~ 225 (372)
++ +.++.++.+.
T Consensus 140 -------------------------------------------------------------~~-------~~EL~~~~k~ 151 (349)
T 3q7a_A 140 -------------------------------------------------------------DP-------VSEIEYIHGS 151 (349)
T ss_dssp -------------------------------------------------------------CC-------HHHHHHHHHH
T ss_pred -------------------------------------------------------------Ch-------HHHHHHHHHH
Confidence 01 1223344444
Q ss_pred cCCCccHHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC-------
Q 017388 226 WGDSMEKVDILSALAEVALEREDIE--------TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK------- 290 (372)
Q Consensus 226 ~~~~~~~A~~~~~LGev~~e~~~y~--------~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~------- 290 (372)
+...++-..++...+.|....++|+ +++..+.++|.+.... -.++++++.++...++
T Consensus 152 L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N--------~SAW~~R~~lL~~l~~~~~~~~~ 223 (349)
T 3q7a_A 152 LLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN--------NSAWGWRWYLRVSRPGAETSSRS 223 (349)
T ss_dssp TSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHTTSTTCCCCHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHhccccccchHH
Confidence 4445556677777777777777777 8999999998875544 4899999999999987
Q ss_pred chHHHHHHHHHHHHHH
Q 017388 291 PQEAIPYCQKAISVCK 306 (372)
Q Consensus 291 ~~eAi~~~ekAl~i~~ 306 (372)
+++++.++.++|.+..
T Consensus 224 ~~eELe~~~~aI~~~P 239 (349)
T 3q7a_A 224 LQDELIYILKSIHLIP 239 (349)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 6899999999997643
No 214
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.21 E-value=0.032 Score=54.13 Aligned_cols=134 Identities=7% Similarity=-0.139 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCcccCCCCccC
Q 017388 68 ELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (372)
Q Consensus 68 ~L~~~G~~~~~~gd----------y~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~ 137 (372)
....+|......++ |.+++.++..++.+ +|.+..+++.-|.+|..+++
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--------~PKny~aW~hR~wlL~~l~~-------------- 123 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLPE-------------- 123 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHCSS--------------
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHhccCc--------------
Confidence 34455555555554 78888888888887 89999999999999885520
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHH
Q 017388 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (372)
Q Consensus 138 e~~~~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~ 217 (372)
.+++.++++++.
T Consensus 124 --------------------------------------------------------------------~~~~~EL~~~~k 135 (331)
T 3dss_A 124 --------------------------------------------------------------------PNWARELELCAR 135 (331)
T ss_dssp --------------------------------------------------------------------CCHHHHHHHHHH
T ss_pred --------------------------------------------------------------------ccHHHHHHHHHH
Confidence 134455555555
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhC--------
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALERED-IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG-------- 288 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~-y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~-------- 288 (372)
+..+ ++.-..++...+.|....+. +++++.++.+++.+.. .-..++++++.++...
T Consensus 136 ~l~~-------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p--------~N~SAW~~R~~ll~~l~~~~~~~~ 200 (331)
T 3dss_A 136 FLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF--------SNYSSWHYRSCLLPQLHPQPDSGP 200 (331)
T ss_dssp HHHH-------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS--------CCHHHHHHHHHHHHHHSCCC----
T ss_pred HHHh-------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHhhhcccccc
Confidence 4433 34557788889999999998 6999999999998643 3358899999988876
Q ss_pred ------CCchHHHHHHHHHHHHHH
Q 017388 289 ------SKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 289 ------~~~~eAi~~~ekAl~i~~ 306 (372)
+.+++++.+|.++|.+..
T Consensus 201 ~~~~~~~~~~eEle~~~~ai~~~P 224 (331)
T 3dss_A 201 QGRLPENVLLKELELVQNAFFTDP 224 (331)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHST
T ss_pred ccccchHHHHHHHHHHHHHHHhCC
Confidence 457899999999997653
No 215
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.72 E-value=0.054 Score=45.96 Aligned_cols=88 Identities=13% Similarity=0.079 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCch
Q 017388 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 292 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~ 292 (372)
+-|...+..|.+..+. .=..++-+++|...+.+.+- .+.++++.|.+.++..+....-+++|.||+++.+.|+|.
T Consensus 21 eeL~~l~~qy~~E~~~-~vs~qt~F~yAw~Lv~S~~~----~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~ 95 (134)
T 3o48_A 21 QQLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDV----NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS 95 (134)
T ss_dssp HHHHHHHHHHHHTTGG-GSCHHHHHHHHHHHHHSSCH----HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCC-CCChhhHHHHHHHHHcCCCH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHH
Confidence 4477888889886422 22469999999999998765 345566666666664333246799999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 293 EAIPYCQKAISVC 305 (372)
Q Consensus 293 eAi~~~ekAl~i~ 305 (372)
.|..+.+..|.+-
T Consensus 96 ~Ar~y~d~lL~~e 108 (134)
T 3o48_A 96 MAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhC
Confidence 9999999988764
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.63 E-value=0.32 Score=42.65 Aligned_cols=108 Identities=7% Similarity=-0.049 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCCCCC
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~p-e~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~~~~ 144 (372)
-..|+...+.++..|-|+.|+-+..-++.+...--.-..| .-+.++++||.+|+..
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~----------------------- 76 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD----------------------- 76 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc-----------------------
Confidence 3568889999999999999999999999985332222223 4578999999999954
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 017388 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (372)
Q Consensus 145 ~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I~ek 224 (372)
++|-.|...|..|+.+...
T Consensus 77 -------------------------------------------------------------~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 77 -------------------------------------------------------------KEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHC
T ss_pred -------------------------------------------------------------cHHHHHHHHHHHHHHHHHH
Confidence 2677788888887766653
Q ss_pred hcCC------------------CccHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 017388 225 HWGD------------------SMEKVDILSALAEVALEREDIETSLSDYQ 257 (372)
Q Consensus 225 ~~~~------------------~~~~A~~~~~LGev~~e~~~y~~Al~~y~ 257 (372)
.... ...-+++.+.++.++++.+++.+||..++
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 2211 11235788999999999999999988754
No 217
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.45 E-value=0.095 Score=44.94 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHH
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eA 294 (372)
|...|..|.+.... .-..++.+++|...+.+.+-. +-++.+.|++.++..+.-.--+++|.|+++|.+.++|.+|
T Consensus 22 L~~lr~qY~~E~~~-~vs~~t~F~YAw~Lv~S~~~~----di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~A 96 (144)
T 1y8m_A 22 LEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVN----DERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMA 96 (144)
T ss_dssp HHHHHHHHHHTTST-TSCHHHHHHHHHHHHHSSSHH----HHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHhccC-CCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHH
Confidence 67788888877343 346899999999999988764 3445555555555322213458999999999999999999
Q ss_pred HHHHHHHHHHH
Q 017388 295 IPYCQKAISVC 305 (372)
Q Consensus 295 i~~~ekAl~i~ 305 (372)
..+++..|.+-
T Consensus 97 r~y~d~lL~~e 107 (144)
T 1y8m_A 97 KRYVDTLFEHE 107 (144)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcC
Confidence 99999888763
No 218
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.36 E-value=0.14 Score=50.79 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=85.4
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017388 204 DESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (372)
Q Consensus 204 d~~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~ 283 (372)
+.++|..|.+++...+.-+.+. +....+.++|..-..+|...+|+..+...|.+|..+...++ ++.+..|.....-|.
T Consensus 111 ~~~~y~~a~~~i~~l~~~~~~~-dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~-~~p~i~a~i~~~~Gi 188 (394)
T 3txn_A 111 DTALYTEALALGAQLLRELKKL-DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY-CPPKVQGALDLQSGI 188 (394)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTS-SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC-CCHHHHHHHHHHhhH
Confidence 4578999988888777766553 44577999999999999999999999999999999998774 455678999999999
Q ss_pred HHH-hCCCchHHHHHHHHHHHHH
Q 017388 284 CLE-IGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 284 a~~-~~~~~~eAi~~~ekAl~i~ 305 (372)
.|. ..++|..|..+|-.|..-+
T Consensus 189 ~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 189 LHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHhcc
Confidence 999 9999999999999887544
No 219
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=94.92 E-value=0.027 Score=48.78 Aligned_cols=59 Identities=17% Similarity=0.199 Sum_probs=49.2
Q ss_pred ChHHHHHHH--------HHHHHHHHHHhcCCC-c-cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKM--------LDVARAIAEKHWGDS-M-EKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 206 ~dl~~Awe~--------Le~Ar~I~ek~~~~~-~-~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
--|+.||.+ .+.+..+++...... + ...+|+++||-.+...++|+.|+.+++++|++.+
T Consensus 34 ~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 34 TQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 478889865 457777777665543 4 6799999999999999999999999999999975
No 220
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.66 E-value=0.49 Score=46.29 Aligned_cols=78 Identities=9% Similarity=0.053 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH----
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR---- 308 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~r---- 308 (372)
..+...+++.++..|+|.+|+..+.+.+.+.. .-=.+|..|-.+|...|+..+|+.+|++.-..+...
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P--------~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~ 242 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHP--------YREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGID 242 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 45567788999999999999999998876642 112578899999999999999999999999988765
Q ss_pred ----HHHHHHHHHh
Q 017388 309 ----VQRLLNEVKS 318 (372)
Q Consensus 309 ----l~~l~~~~~~ 318 (372)
+..|...|-.
T Consensus 243 P~~~l~~l~~~il~ 256 (388)
T 2ff4_A 243 PGPTLRALNERILR 256 (388)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHc
Confidence 4456555544
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.36 E-value=0.16 Score=48.62 Aligned_cols=65 Identities=11% Similarity=0.018 Sum_probs=49.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcc-HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSME-KVDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELNF 279 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~-~A~~~~~LGev~~e~-~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~ 279 (372)
++.+.|..+|++|+.|. +. .++++...|+.++.. ++++.|...++++|.+-....| ++.++.+..
T Consensus 218 Gd~ekA~~~ferAL~Ln-------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P--~~~lan~~~ 284 (301)
T 3u64_A 218 GGMEKAHTAFEHLTRYC-------SAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVP--HNKLLVILS 284 (301)
T ss_dssp CCHHHHHHHHHHHHHHC-------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCS--SCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCC--ChhHHHHHH
Confidence 46778888888888773 43 388999999999985 9999999999999997554432 245555543
No 222
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.26 E-value=1.8 Score=43.22 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHhhhhhcCcccCCCCccCCCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~-pe~A~~y~~yG~ALl~~ar~es~vLg~~~~~~~e~~~ 141 (372)
.++|.--..+++.+...|+|.+|.++++.. .++.||.+. .+..++|+.--+.++..
T Consensus 134 ~erarl~~~La~i~e~~g~~~eA~~iL~~l---~~Et~~~~~~~~kve~~l~q~rl~l~~-------------------- 190 (445)
T 4b4t_P 134 VERARVTKDLVEIKKEEGKIDEAADILCEL---QVETYGSMEMSEKIQFILEQMELSILK-------------------- 190 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHH---HHHHCSSSCHHHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHH---HHHHHhcccHHHHHHHHHHHHHHHHHC--------------------
Confidence 356666678999999999999999998765 467788644 35566666555555533
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCcccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 017388 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (372)
Q Consensus 142 ~~~~d~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~ed~e~~~~e~~~~~~ed~~dl~~Awe~Le~Ar~I 221 (372)
+|+..|...+..++..
T Consensus 191 ----------------------------------------------------------------~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 191 ----------------------------------------------------------------GDYSQATVLSRKILKK 206 (445)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHHHHHh
Confidence 3677777777777755
Q ss_pred HHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 017388 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (372)
Q Consensus 222 ~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l 266 (372)
+.....++.-.+..+...|.++...++|.+|-.+|..++......
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~ 251 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIK 251 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccccc
Confidence 444433334568889999999999999999999999999876554
No 223
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.43 E-value=0.15 Score=52.10 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
-.|+..||++..-...+..|..+|.+|+.+.+ ..+..|++||+.....+++-+|+-||-+||.+
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P--------~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVP--------SNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCC--------CCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 35889999999999999999999999999965 44689999999999999999999999999864
No 224
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=92.99 E-value=1.5 Score=46.21 Aligned_cols=94 Identities=4% Similarity=-0.072 Sum_probs=53.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC------C---------CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 017388 206 SDLDLAWKMLDVARAIAEKHWG------D---------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD 270 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~------~---------~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~ 270 (372)
++++.|..+|+.++..+.+... + ......+|...+......++.+.|...|.+|+... +..
T Consensus 392 ~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~----~~~ 467 (679)
T 4e6h_A 392 TKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK----KLV 467 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG----GGS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc----CCC
Confidence 4566777777777665421110 0 01245567777777777788888888888877651 111
Q ss_pred ChhHHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHHH
Q 017388 271 SRHIAELNFRICLCLEIGS-KPQEAIPYCQKAISVCK 306 (372)
Q Consensus 271 ~r~iAe~~~~Lg~a~~~~~-~~~eAi~~~ekAl~i~~ 306 (372)
. ..+|...+......+ +++.|...|+++|..+.
T Consensus 468 ~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 468 T---PDIYLENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp C---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred C---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 1 233444444444433 47777777777776554
No 225
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.33 E-value=5.5 Score=39.31 Aligned_cols=58 Identities=19% Similarity=0.153 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVAL-EREDIETSLSDYQKALTIL 263 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~-e~~~y~~Al~~y~~AL~I~ 263 (372)
+|+..+...|..|+.+-.....++.-.|.+...-|.+++ ..++|..|-.+|-.|+.-+
T Consensus 153 ~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 153 SNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 378888888999998876543333456888888999999 9999999999999997444
No 226
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=92.15 E-value=0.22 Score=47.90 Aligned_cols=83 Identities=14% Similarity=0.027 Sum_probs=61.9
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPY 297 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~ 297 (372)
|+..|++.......-..++..||.++...|+|++|+..|.++|..-+ ++.-.+++..++.+|..+++++.|...
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~------~~~~lea~~l~vqi~L~~~r~d~A~k~ 158 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDE------AEGTTELLLLAIEVALLNNNVSTASTI 158 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSC------STTHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC------CcCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 33445544432222245567999999999999999999998854321 134568899999999999999999999
Q ss_pred HHHHHHHHH
Q 017388 298 CQKAISVCK 306 (372)
Q Consensus 298 ~ekAl~i~~ 306 (372)
+++...+..
T Consensus 159 l~~~~~~~~ 167 (310)
T 3mv2_B 159 FDNYTNAIE 167 (310)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHhcCc
Confidence 998777653
No 227
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.86 E-value=1.2 Score=36.55 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CC-CChhHHHHHHHHHHHHHHhh
Q 017388 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GE-LALECVNAYYQYGRALLYKA 122 (372)
Q Consensus 61 ~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge-~~pe~A~~y~~yG~ALl~~a 122 (372)
..+..|..|+.+|...-..|+|.+|+.+|.+|++++.... .+ ..+..-..|-..-.-|+..+
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RA 76 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRA 76 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999987654 34 55665555544444444443
No 228
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=91.71 E-value=1.1 Score=41.21 Aligned_cols=72 Identities=15% Similarity=0.026 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~-iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.++.|.-|+++. .|+-+.|...|+.|+.|....++|.||. ++.++.-=-+-|...++.++|...-++|+.+.
T Consensus 126 KGDYyRYlAE~~--~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 126 KSDISRYKLEFG--LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHc--cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 577788888865 4459999999999999999889999985 44444333345677889999999999998853
No 229
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=91.68 E-value=0.29 Score=48.20 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCc
Q 017388 216 DVARAIAEKHWGDSMEKVDILSALAEVALEREDI----ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (372)
Q Consensus 216 e~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y----~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~ 291 (372)
..|+.+|++.....|..+.+|..|+.+++-...+ ...+..+..++.-...+ ...+..+.+|.-+++++.+.|++
T Consensus 216 ~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~--~~~~~~a~~~~alal~~l~~gd~ 293 (372)
T 3ly7_A 216 NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTL--PELNNLSIIYQIKAVSALVKGKT 293 (372)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC--GGGTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhc--ccCCcCHHHHHHHHHHHHhCCCH
Confidence 6677777777666677888888777777632211 12334444555522221 23355678999999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 017388 292 QEAIPYCQKAISVC 305 (372)
Q Consensus 292 ~eAi~~~ekAl~i~ 305 (372)
++|+.++++|+.+-
T Consensus 294 d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 294 DESYQAINTGIDLE 307 (372)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999984
No 230
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=91.41 E-value=0.43 Score=36.94 Aligned_cols=53 Identities=19% Similarity=0.114 Sum_probs=41.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHH
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAY 111 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y 111 (372)
....+..|..|+.+|......|+|.+|+.+|.+|++.+.... .+..+..-+.+
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~i 65 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIY 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 345678899999999999999999999999999999976532 23334444433
No 231
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=90.81 E-value=1.5 Score=41.10 Aligned_cols=74 Identities=24% Similarity=0.270 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHhCCCchHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALEREDI---ETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y---~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg-~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
.++.|.-|+++.....+. +.|...|++|+.|....++|.||.---...|.+ +-|...++.++|+..-++|..--
T Consensus 131 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 131 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 577788888876544333 589999999999999889999985333333333 33455788888887777665443
No 232
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.76 E-value=0.34 Score=48.16 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=52.9
Q ss_pred HHHHHHHHhcC---CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchH
Q 017388 217 VARAIAEKHWG---DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 293 (372)
Q Consensus 217 ~Ar~I~ek~~~---~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~e 293 (372)
.|..+|.+... ......+++..+-.+++..++|..+...+.++..+... +.+....+.....-|+.+...++|..
T Consensus 149 ~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~--~~d~~~~~~lk~~~gl~~l~~r~f~~ 226 (429)
T 4b4t_R 149 NAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK--GGDWERRNRYKTYYGIHCLAVRNFKE 226 (429)
T ss_dssp THHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT--CCCTHHHHHHHHHHHHGGGGTSCHHH
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHhChHHH
Confidence 34555544322 12346677777777777777777777777776655433 34555566666667777777777777
Q ss_pred HHHHHHHHHHH
Q 017388 294 AIPYCQKAISV 304 (372)
Q Consensus 294 Ai~~~ekAl~i 304 (372)
|..+|-.++..
T Consensus 227 Aa~~f~e~~~t 237 (429)
T 4b4t_R 227 AAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 77777555443
No 233
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=90.25 E-value=2.6 Score=33.02 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHH
Q 017388 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALL 119 (372)
Q Consensus 61 ~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y~~yG~ALl 119 (372)
..+..|..|+.+|..+-..|+|.+|+.+|..|++.+.... .+..+..-..+-.-=.-|+
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl 69 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYM 69 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999987654 4555665554443333333
No 234
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=90.24 E-value=1.5 Score=40.53 Aligned_cols=73 Identities=29% Similarity=0.408 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH-HHhCCCchHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLC-LEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a-~~~~~~~~eAi~~~ekAl~i 304 (372)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.++- |.-.+..+.|...-++|..-
T Consensus 129 KGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 129 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 57778888888655443 468899999999999999999998633333344433 45678888887777776553
No 235
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.21 E-value=1.4 Score=43.72 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=54.2
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
...++++..||..|.+.|+|+.|+..|.++.... .+. ....+.+..+-.++.+.+++..+..++.+|.
T Consensus 128 ~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~---~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~ 195 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKA---IST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVN 195 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHH---TCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---CCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4577889999999999999999999999876654 333 3456777777788888888888888888863
No 236
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.19 E-value=0.63 Score=35.86 Aligned_cols=51 Identities=18% Similarity=0.101 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYY 112 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y~ 112 (372)
.+..|..|+.+|......|+|.+|+.+|.+|++.+.... .+..+..-+.+.
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir 58 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYE 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 567899999999999999999999999999999987642 334455544443
No 237
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=89.99 E-value=2 Score=32.93 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHHh
Q 017388 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 61 ~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
..+..|..|+.+|...-..|+|.+|+.+|..|++++.... .+..|..-..+-.--.-++..
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~R 69 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNR 69 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999999877543 345566555554444444433
No 238
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=89.75 E-value=0.53 Score=40.89 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKH-WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~-~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~ 285 (372)
-++.-.++|++|....-.. .......+..+...+.. .+.++.+.|...|+.|+.+ |...|..|...+.--
T Consensus 34 ~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFE 104 (161)
T 4h7y_A 34 LLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFE 104 (161)
T ss_dssp HHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHH
Confidence 4444445555444322111 01124578888888855 7889999999999999997 334488898888888
Q ss_pred HhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017388 286 EIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGE 321 (372)
Q Consensus 286 ~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~~~~ 321 (372)
-++|++..|...+.+||.++..-...|...|..+..
T Consensus 105 iRqgnl~kARkILg~AiG~~~k~~~~le~a~~nl~~ 140 (161)
T 4h7y_A 105 LSQGNVKKSKQLLQKAVERGAVPLEMLEIALRNLNL 140 (161)
T ss_dssp HHTTCHHHHHHHHHHHHHTTCBCHHHHHHHHHHHHT
T ss_pred HHcccHHHHHHHHHHHhccCCCcHHHHHHHHHhhhc
Confidence 899999999999999999887777777777777643
No 239
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=89.70 E-value=3.8 Score=32.38 Aligned_cols=78 Identities=17% Similarity=0.136 Sum_probs=51.8
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
+..|-.|...++-++..|+|++||+++++|......-+.-. ....++..| +-=..++-+=+.+++.|+
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmklt--qs~qa~~SL----------qLQrd~HlKQ~~liq~r~ 79 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLT--ESEQAHLSL----------ELQRDSHMKQLLLIQERW 79 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHH----------HHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh--ccHHHHHHH----------HHHHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999998877654332 122333322 112344555666776666
Q ss_pred HHHH--HHHHhh
Q 017388 310 QRLL--NEVKSL 319 (372)
Q Consensus 310 ~~l~--~~~~~~ 319 (372)
..-+ ++++.+
T Consensus 80 k~~~~ee~l~~~ 91 (97)
T 2crb_A 80 KRAKREERLKAH 91 (97)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHhhHHHHHHhh
Confidence 6553 344544
No 240
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=89.54 E-value=1.6 Score=40.30 Aligned_cols=72 Identities=26% Similarity=0.268 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHhCCCchHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg-~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|...++.++|+..-++|..
T Consensus 126 KGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 126 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57778888887654333 3689999999999999999999985322333333 334557888888777776654
No 241
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.20 E-value=1.3 Score=45.51 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=58.7
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD---SRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~---~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
...|.+++.|=..|+..+.|++|.....++- +|.. +...+.=+|-+|.++...++|.+|..|+..|+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~------fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLE------YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC------SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCc------CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4678999999999999999999999988773 5543 346677888899999999999999999999885
No 242
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=89.19 E-value=2.8 Score=32.41 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHH
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQ 113 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y~~ 113 (372)
..|..|+.++......|+|.+|+.+|..|++.+.... ++..|..-..+-.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~ 64 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLRE 64 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 4588999999999999999999999999999987655 5666766555443
No 243
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=88.53 E-value=1.4 Score=34.85 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCC
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGE 102 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge 102 (372)
-+..|-.+-.++.+++..|+|++|++|+.+|+..+.+.+--
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkl 51 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKL 51 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 46778889999999999999999999999999988766543
No 244
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=88.37 E-value=1.8 Score=36.05 Aligned_cols=59 Identities=17% Similarity=0.199 Sum_probs=48.3
Q ss_pred ChHHHHHHH--------HHHHHHHHHHhcCCC-c-cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKM--------LDVARAIAEKHWGDS-M-EKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 206 ~dl~~Awe~--------Le~Ar~I~ek~~~~~-~-~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
.-|..||.+ ...+..+++...... + ..=+|++.||--+...|+|+.|+.+++.+|++.+
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 479999976 355667777665543 3 5779999999999999999999999999999864
No 245
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=88.27 E-value=1.8 Score=40.24 Aligned_cols=73 Identities=26% Similarity=0.308 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHhCCCchHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg-~a~~~~~~~~eAi~~~ekAl~i 304 (372)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|...+..+.|...-++|..-
T Consensus 127 KGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~ 203 (248)
T 3uzd_A 127 KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDD 203 (248)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46667777777543332 3688999999999999999999985333333333 3345578888887777666543
No 246
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=88.12 E-value=1.1 Score=47.26 Aligned_cols=84 Identities=14% Similarity=0.049 Sum_probs=66.8
Q ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHH-HHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHH
Q 017388 218 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSL-SDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 296 (372)
Q Consensus 218 Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al-~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~ 296 (372)
.+.+|++.+...+...++|...+......++.+.|+ ..|++|+... | .+ ...|+.++..+...++++.|..
T Consensus 328 v~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~----P-~s---~~Lwl~~a~~ee~~~~~e~aR~ 399 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCI----P-NS---AVLAFSLSEQYELNTKIPEIET 399 (679)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHC----T-TC---HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhC----C-CC---HHHHHHHHHHHHHhCCHHHHHH
Confidence 345566665545667899999999999999999997 9999998643 2 22 3668889999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017388 297 YCQKAISVCKSRV 309 (372)
Q Consensus 297 ~~ekAl~i~~~rl 309 (372)
.|++++..+...+
T Consensus 400 iyek~l~~l~~~~ 412 (679)
T 4e6h_A 400 TILSCIDRIHLDL 412 (679)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998764433
No 247
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.51 E-value=1.3 Score=39.00 Aligned_cols=90 Identities=17% Similarity=0.091 Sum_probs=59.6
Q ss_pred ChHHHHHHH--HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----hcCCCC--hhHHH
Q 017388 206 SDLDLAWKM--LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER-----MVEPDS--RHIAE 276 (372)
Q Consensus 206 ~dl~~Awe~--Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~-----l~~~~~--r~iAe 276 (372)
-.|++|.+. |++|+.|.... +.-..|..||+..+..|++.-|..+|+++=++-.- +.|... ..++.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~ 84 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQN 84 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 467777765 77777776543 24678999999999999999999999987444332 222111 11111
Q ss_pred H------HHHHHHHHHhCCCchHHHHHHHH
Q 017388 277 L------NFRICLCLEIGSKPQEAIPYCQK 300 (372)
Q Consensus 277 ~------~~~Lg~a~~~~~~~~eAi~~~ek 300 (372)
. +..-..++.+.|++++++..|.+
T Consensus 85 iA~~~g~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 85 IAQTREDFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHCccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1 22234566788888898888866
No 248
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=86.66 E-value=2.6 Score=39.43 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHhCCCchHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg-~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.++.|.-|+++.....+ -+.|...|++|+.|. ..++|.||.---...|.+ +-|...++.++|+..-++|..
T Consensus 152 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 152 KGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57778888887654433 368899999999999 889999985333333333 334457888888777776654
No 249
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=85.17 E-value=1.2 Score=47.73 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekA 301 (372)
+..+...++..+..++|+-|+..-++|+.+...-| .+|+.|+.||-.+++|+.|+-..+.+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF--------~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSF--------ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH--------HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh--------HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45677788989999999999999999999988777 99999999999999999999665543
No 250
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=85.14 E-value=3.3 Score=38.71 Aligned_cols=73 Identities=26% Similarity=0.250 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH-HHHhCCCchHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICL-CLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~-a~~~~~~~~eAi~~~ekAl~i 304 (372)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.++ -|.-.++.++|+..-++|..-
T Consensus 152 KGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 152 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56777777777654433 36789999999999999999999853333334433 344578888887777766543
No 251
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.63 E-value=2.6 Score=43.38 Aligned_cols=48 Identities=23% Similarity=0.384 Sum_probs=37.5
Q ss_pred hHHHHHHH--HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 017388 207 DLDLAWKM--LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKA 259 (372)
Q Consensus 207 dl~~Awe~--Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~A 259 (372)
.|.+|+.+ |+.|+.+.... .--..+..||+.++..++|+.|+..|.++
T Consensus 658 ~f~~~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 658 KFELALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred heehhhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 56666654 77777776443 23468999999999999999999999987
No 252
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=83.84 E-value=6.2 Score=31.07 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHH-HHHHHHHHHh
Q 017388 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAY-YQYGRALLYK 121 (372)
Q Consensus 64 ~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y-~~yG~ALl~~ 121 (372)
..|..|+..|+.++..++|.+|.-+|.++..+ ...|++-.++ |.+|.|--.+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~------ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL------SDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc------ccCHHHHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999876 3578898898 8888776554
No 253
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=83.23 E-value=13 Score=36.19 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHH--HhcCCCC---------hhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 017388 251 TSLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (372)
Q Consensus 251 ~Al~~y~~AL~I~~--~l~~~~~---------r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~r 308 (372)
++..+|.+|+.... ..++... -..|.+||..|......+++.+||.+++.|...++..
T Consensus 240 ~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 308 (380)
T 3c3r_A 240 QAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTV 308 (380)
T ss_dssp HHHHHHHHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 34456666666554 2222222 2347888999999999999999999999999877653
No 254
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=82.86 E-value=9.8 Score=37.17 Aligned_cols=57 Identities=16% Similarity=0.130 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhcCC-------C---------ChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 251 TSLSDYQKALTILERMVEP-------D---------SRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 251 ~Al~~y~~AL~I~~~l~~~-------~---------~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
++..+|.+|+......... . +...|.+||..|..+...+++.+||.+++.|...++.
T Consensus 217 ~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 289 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLIS 289 (392)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 4556677777766654210 1 1246788999999999999999999999999977655
No 255
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=81.81 E-value=14 Score=38.93 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHH--HhcCCCC---------hhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 251 TSLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 251 ~Al~~y~~AL~I~~--~l~~~~~---------r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
++..+|..|+.... ..++... ...|.+||..|..+...++|.+||.+++.|...++.
T Consensus 225 ~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 292 (704)
T 2xs1_A 225 QAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKT 292 (704)
T ss_dssp HHHHHHHHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Confidence 34456666666654 2233332 235778899999999999999999999999987754
No 256
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=81.45 E-value=8.8 Score=29.55 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
-|..+.+.|+-+...|+|++|+.+|+.||+.|-.-+
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~al 50 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 50 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 466677788888999999999999999999977654
No 257
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=80.84 E-value=3.8 Score=38.48 Aligned_cols=72 Identities=19% Similarity=0.304 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhc--CCCChhHHHHHHHHHHHH-HhCCCchHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMV--EPDSRHIAELNFRICLCL-EIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~---y~~Al~~y~~AL~I~~~l~--~~~~r~iAe~~~~Lg~a~-~~~~~~~eAi~~~ekAl~ 303 (372)
.++.|.-|+++.....+ -+.|...|++|++|.+..+ +|.||.---...|.++-| ...++.++|+..-++|.+
T Consensus 148 KGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 148 KGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 35556666665443332 3789999999999999888 999986333334444443 457788888777777655
No 258
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.78 E-value=6.7 Score=38.96 Aligned_cols=101 Identities=14% Similarity=-0.000 Sum_probs=74.0
Q ss_pred cCcChHHHHHHHHHHH-HHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017388 203 EDESDLDLAWKMLDVA-RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRI 281 (372)
Q Consensus 203 ed~~dl~~Awe~Le~A-r~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~L 281 (372)
++.+++..|..+|..- +..|. .........++.....+++..++|.+|...++++..-..... +.....+..+...
T Consensus 148 e~~g~~~eA~~iL~~l~~Et~~--~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~-~~~~lk~~~~~~~ 224 (445)
T 4b4t_P 148 KEEGKIDEAADILCELQVETYG--SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNP-KYESLKLEYYNLL 224 (445)
T ss_dssp HHHTCHHHHHHHHHHHHHHHCS--SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccC-CcHHHHHHHHHHH
Confidence 3456777776665432 22221 123356899999999999999999999999999754333322 2334567788889
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 282 CLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 282 g~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
|..|...++|.+|..+|..+.....
T Consensus 225 ~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 225 VKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHhccc
Confidence 9999999999999999999987653
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=80.67 E-value=11 Score=32.01 Aligned_cols=58 Identities=10% Similarity=0.148 Sum_probs=45.2
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCC-CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKML--------DVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 206 ~dl~~Awe~L--------e~Ar~I~ek~~~~-~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
.-|..||.+. ..+..+++..... ....=+|+..||--+...++|+.|..+.+.+|++.
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4799999763 4555555554332 23678999999999999999999999999999885
No 260
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=80.40 E-value=20 Score=34.88 Aligned_cols=38 Identities=21% Similarity=-0.065 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQR 311 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~ 311 (372)
.|.+||..|..+...++|.+||.+++.|...++.-...
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~~ 289 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEAL 289 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999988755433
No 261
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=79.60 E-value=2.7 Score=32.15 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHH
Q 017388 278 NFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLL 313 (372)
Q Consensus 278 ~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~ 313 (372)
+.++|.=|...|+|+.|+.||+.++.-+.+.|..+.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~ 50 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVK 50 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcC
Confidence 457889999999999999999999999988887773
No 262
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=79.38 E-value=14 Score=27.91 Aligned_cols=37 Identities=8% Similarity=-0.015 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 273 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 273 ~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
.-|..+.+.|+-....|+|++|+.+|..|++.|..-+
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~ 47 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLAL 47 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 3455666777788899999999999999999877655
No 263
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=78.93 E-value=3.5 Score=34.75 Aligned_cols=59 Identities=10% Similarity=0.153 Sum_probs=45.6
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCCC-ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKML--------DVARAIAEKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 206 ~dl~~Awe~L--------e~Ar~I~ek~~~~~-~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
.-|..||.+. ..+..+++...... ...=+|+.-||--+...|+|+.|+.+.+.+|.+.+
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP 109 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 109 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCT
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCC
Confidence 4788899763 45555555544322 36789999999999999999999999999998753
No 264
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=78.33 E-value=18 Score=29.39 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=36.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017388 245 EREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLG 320 (372)
Q Consensus 245 e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~~~ 320 (372)
..++|.+|+..|..|++++...+- ....-..-...|++=+.-+..|.+.|+..|....
T Consensus 30 ~ag~y~eAl~lY~~Aie~l~~alk------------------~e~~~~~~k~~lr~K~~eYl~RAE~LK~~l~~~~ 87 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQYFLHVVK------------------YEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKE 87 (117)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHH------------------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HccCHHHHHHHHHHHHHHHHHHHH------------------hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 458999999999999998876531 1101112233444445555667777777776543
No 265
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.23 E-value=21 Score=34.74 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=72.6
Q ss_pred ChHHHHHHHHHHHHHHHHH----hcCC------CccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 017388 206 SDLDLAWKMLDVARAIAEK----HWGD------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 275 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek----~~~~------~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iA 275 (372)
.|.+.|.+.|+....-+.+ .... ......+...++.+++..++++.|...++++-.+....-+.+.+..+
T Consensus 90 ~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~ 169 (393)
T 4b4t_O 90 KDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITN 169 (393)
T ss_dssp TCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHH
Confidence 3567777777654322221 1111 13366788899999999999999999999999998887666666777
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 276 ELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 276 e~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
..|+..+.-|...++|..+..++-..+..
T Consensus 170 ~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 170 SFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 88888888899999988777766666654
No 266
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.77 E-value=5.7 Score=30.35 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Q 017388 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (372)
Q Consensus 275 Ae~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~ 310 (372)
|..+.+.|+-+...|+|.+|+.+|++||+.+..-+.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk 46 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIV 46 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 445566778889999999999999999998776643
No 267
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=74.25 E-value=6 Score=30.33 Aligned_cols=36 Identities=25% Similarity=0.169 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
-|..+.+.|+-+...|+|.+|+.+|++||+.+..-+
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~al 53 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLV 53 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 455667788888999999999999999999877654
No 268
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=74.17 E-value=32 Score=34.18 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchH
Q 017388 215 LDVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 293 (372)
Q Consensus 215 Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~-~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~e 293 (372)
++.||.||.+. ........+|...|.+-...+ +++.|...|+.++.. + ++.+.+-..| +.-....|+.+.
T Consensus 302 ~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~----~-~~~~~~~~~y---id~e~~~~~~~~ 372 (493)
T 2uy1_A 302 LELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLK----H-PDSTLLKEEF---FLFLLRIGDEEN 372 (493)
T ss_dssp HHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH----C-TTCHHHHHHH---HHHHHHHTCHHH
T ss_pred HHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHH----C-CCCHHHHHHH---HHHHHHcCCHHH
Confidence 46678888777 322234667777777766666 599999999999884 2 2444332222 333445567777
Q ss_pred HHHHHHHH
Q 017388 294 AIPYCQKA 301 (372)
Q Consensus 294 Ai~~~ekA 301 (372)
|...|+++
T Consensus 373 aR~l~er~ 380 (493)
T 2uy1_A 373 ARALFKRL 380 (493)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 77666664
No 269
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=69.65 E-value=37 Score=26.28 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=19.9
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHhc
Q 017388 244 LEREDIETSLSDYQKALTILERMV 267 (372)
Q Consensus 244 ~e~~~y~~Al~~y~~AL~I~~~l~ 267 (372)
=..++|.+|+..|..|++++...+
T Consensus 26 D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999887543
No 270
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=69.13 E-value=14 Score=36.38 Aligned_cols=72 Identities=14% Similarity=-0.039 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 232 ~A~~~~~LGev~~e~--~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
.--++.+||++---. .....++..|.+|+...+.++..+|- -.|.-+|-.|.+.+++.+|+.++-.|-.+++
T Consensus 254 YPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~ 327 (472)
T 3re2_A 254 YPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVAG 327 (472)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHHH
Confidence 344566666654322 22233999999999999999988774 5677799999999999999999988887654
No 271
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=65.16 E-value=29 Score=34.75 Aligned_cols=22 Identities=23% Similarity=0.119 Sum_probs=18.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHH
Q 017388 74 TNALKESDYGEAAECFSRALEI 95 (372)
Q Consensus 74 ~~~~~~gdy~eAv~~~~~Alel 95 (372)
..+.+.|++++|..+|.+..+.
T Consensus 34 d~c~k~G~~~~A~~lf~~M~~~ 55 (501)
T 4g26_A 34 DMCSKKGDVLEALRLYDEARRN 55 (501)
T ss_dssp HHTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHc
Confidence 4566899999999999987764
No 272
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=65.00 E-value=1.3 Score=41.32 Aligned_cols=62 Identities=11% Similarity=0.171 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHHh
Q 017388 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 60 ~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~-Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
...+..|..|+.+|..+-..|+|.+|..+|.+|++++.... ++..+..-..+...-.-|+..
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~R 79 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDR 79 (257)
T ss_dssp ---------------------------------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 33567799999999999999999999999999999987654 455555555555444444444
No 273
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=64.93 E-value=19 Score=28.49 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=32.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017388 58 EREKTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (372)
Q Consensus 58 ~~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~ 96 (372)
+.+........-+.+|-.++..|+++.|+.+|.+|+.++
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 344555567778899999999999999999999999874
No 274
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.64 E-value=17 Score=27.27 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017388 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEI 95 (372)
Q Consensus 60 ~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel 95 (372)
+........-+.+|-.++..|++++|+.+|.+|+.+
T Consensus 11 e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 11 EAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 334445667788999999999999999999999986
No 275
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=63.47 E-value=1.9 Score=35.63 Aligned_cols=79 Identities=11% Similarity=0.181 Sum_probs=48.3
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhcC-CCChhH----------------HHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 240 AEVALEREDIETSLSDYQKALTILERMVE-PDSRHI----------------AELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 240 Gev~~e~~~y~~Al~~y~~AL~I~~~l~~-~~~r~i----------------Ae~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
-.+......+..++..|++|++..+.+-. .+...+ -..+-.||.=|..-..+++|+.++++=+
T Consensus 18 ~~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~~~~lvplg~~~yv~a~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~r~ 97 (133)
T 1fxk_C 18 ELIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQK 97 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEEETTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEcCCCcEEEEEECCCCEEEEEcCCCEEEEeeHHHHHHHHHHHH
Confidence 33445556678888999999998887653 111100 0122234443444445688888888888
Q ss_pred HHHHHHHHHHHHHHHh
Q 017388 303 SVCKSRVQRLLNEVKS 318 (372)
Q Consensus 303 ~i~~~rl~~l~~~~~~ 318 (372)
+.++.++..+++.+..
T Consensus 98 ~~l~~~~~~l~~~l~~ 113 (133)
T 1fxk_C 98 NELESTLQKMGENLRA 113 (133)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777655443
No 276
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=61.11 E-value=23 Score=35.35 Aligned_cols=72 Identities=13% Similarity=0.053 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 232 ~A~~~~~LGev~~e~--~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
.--++.+||+.---. -....++..|.+|+.+-+.++...| .-.|..||-.|.+.++|.+|+.++-.|-.++.
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~ 334 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQ 334 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhh
Confidence 445566677654322 2234588999999999999998777 36677799999999999999999999877653
No 277
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=60.95 E-value=40 Score=28.39 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=35.1
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEP 269 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~ 269 (372)
...|..+...|.+|...|++++|--.|-+.+.|.-..+|.
T Consensus 37 lrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ipk 76 (146)
T 2xze_A 37 FRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPK 76 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHccc
Confidence 3468888899999999999999999999999999876653
No 278
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=60.88 E-value=9.5 Score=29.06 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCC
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGEL 103 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~ 103 (372)
+...-+-+.+|+.+-..|+|+.|+-+|+-+++...++.--.
T Consensus 9 ~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~ 49 (78)
T 2rpa_A 9 LQMIVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSV 49 (78)
T ss_dssp SHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhc
Confidence 34456777899999999999999999999999987765443
No 279
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=59.96 E-value=18 Score=31.30 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 207 dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
|.+.|.+++..|+.+ +...|.+|...|..-+.+|++..|..-+.+|+-+.
T Consensus 75 D~d~aR~vy~~a~~~-------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 75 EPDDARDYFQMARAN-------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp CGGGCHHHHHHHHHH-------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 556777788888776 12349999999999999999999999999998843
No 280
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=59.76 E-value=23 Score=35.50 Aligned_cols=63 Identities=6% Similarity=-0.081 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
..+|+.|=..+...|++++|...|.+... .-+.|+ ..+|..|=.+|...|++++|...|++-.
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~G~~Pd----~~ty~~Li~~~~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMVE---SEVVPE----EPELAALLKVSMDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHHh---cCCCCC----HHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 56788888999999999999999887643 223232 4678889999999999999999998754
No 281
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=59.31 E-value=9.4 Score=40.85 Aligned_cols=55 Identities=22% Similarity=0.276 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhhcCccc
Q 017388 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV 130 (372)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~es~vLg 130 (372)
-|..++.=++..|+|+-|..+-.+|+.+ +|.-+..++.+.++|..+++.+++.|.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHH
Confidence 3555677778899999999999999999 799999999999999999999987654
No 282
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=54.04 E-value=91 Score=27.78 Aligned_cols=100 Identities=6% Similarity=-0.002 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCC
Q 017388 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~ 290 (372)
.+|+.+..-|..... +.+....++...++.+ ..++...+...|.-... +-. -..+|.-|-..|..|...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~---~~I---G~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFN---KGI---GTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHH---HTS---STTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHH---CCC---cHHHHHHHHHHHHHHHHcCC
Confidence 578888888866543 3578899999999877 33445666666653322 112 24568999999999999999
Q ss_pred chHHHHHHHHHHHHH-------HHHHHHHHHHHHhh
Q 017388 291 PQEAIPYCQKAISVC-------KSRVQRLLNEVKSL 319 (372)
Q Consensus 291 ~~eAi~~~ekAl~i~-------~~rl~~l~~~~~~~ 319 (372)
|.+|...|+..|.-. +.+....+.++...
T Consensus 131 ~~~A~~Vy~~GI~~~A~P~~rL~~~~~~F~~R~~~~ 166 (202)
T 3esl_A 131 FLEAKVLLELGAENNCRPYNRLLRSLSNYEDRLREM 166 (202)
T ss_dssp HHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHhc
Confidence 999999999998643 55555555555543
No 283
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=53.80 E-value=15 Score=29.02 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 017388 237 SALAEVALEREDIETSLSDYQKALTILE 264 (372)
Q Consensus 237 ~~LGev~~e~~~y~~Al~~y~~AL~I~~ 264 (372)
..+|+.++.+|+++.|+.||-+||.++.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999988764
No 284
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=52.59 E-value=30 Score=34.63 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVAL---EREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 232 ~A~~~~~LGev~~---e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~ 306 (372)
.--++.+||++-- --|+- .++..|.+|+...+.++..+|- -.|..+|-.|.+.++|.+|+.++-.|-.+++
T Consensus 276 YPmALgnLgDLEe~~pt~gr~-~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~ 349 (550)
T 3u84_A 276 YPMALGNLADLEELEPTPGRP-DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQ 349 (550)
T ss_dssp CHHHHHHHHHHHHHSCCTTCC-CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CchhhcchhhHhhcCCCCCCC-CHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHH
Confidence 3345556665433 22332 4899999999999999988774 5677799999999999999999988876653
No 285
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=51.81 E-value=19 Score=35.56 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 249 y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.+++|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 46667777777765533211223344556667999999999999999999988865
No 286
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=50.04 E-value=1.9e+02 Score=29.21 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=20.4
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHh
Q 017388 73 GTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 73 G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
-..++..|+|+.|.++... ...-..+-.+|...+..
T Consensus 659 f~~~l~~~~~~~A~~~~~~-------------~~~~~~W~~la~~al~~ 694 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLTD-------------ESAEMKWRALGDASLQR 694 (814)
T ss_dssp HHHHHHHTCHHHHHHHHTT-------------CCCHHHHHHHHHHHHHT
T ss_pred eehhhhcCCHHHHHHHHHh-------------hCcHhHHHHHHHHHHHc
Confidence 3455677777777665321 11224666677776654
No 287
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=49.62 E-value=24 Score=29.78 Aligned_cols=47 Identities=6% Similarity=0.092 Sum_probs=39.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChh
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALE 106 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe 106 (372)
.-.-+..|..|+..+..|...|+++.|--+|-+++.|....... ||+
T Consensus 33 l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ipk-Hpd 79 (146)
T 2xze_A 33 PRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPK-HRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGG-STT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHccc-Ccc
Confidence 34457789999999999999999999999999999998765543 555
No 288
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=48.99 E-value=9.9 Score=38.60 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI 262 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I 262 (372)
||+.+-...+..|+..|.+.....|.....|+-||-++...+++-+|+-+|.+||..
T Consensus 159 GDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 159 GDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 444444445677888888776666888999999999999999999999999999863
No 289
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=48.20 E-value=32 Score=30.05 Aligned_cols=53 Identities=19% Similarity=0.070 Sum_probs=40.5
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 242 VALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 242 v~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
+.++.|||+.|.+..+. + + .-..|.+||..-...|+++-|..+|+++-++-+.
T Consensus 14 LAL~lg~l~~A~e~a~~-------l---~---~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L 66 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKK-------L---N---DSITWERLIQEALAQGNASLAEMIYQTQHSFDKL 66 (177)
T ss_dssp HHHHTTCHHHHHHHHHH-------H---C---CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHH
T ss_pred HHHhcCCHHHHHHHHHH-------h---C---CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHH
Confidence 45778888877766443 2 1 2467999999999999999999999997666544
No 290
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=47.81 E-value=51 Score=23.19 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=34.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~ 97 (372)
.+..+..|+.+-.-+...+...|+..|++.+++||+++.
T Consensus 13 ~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 13 RASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 344567899999999999999999999999999999974
No 291
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=47.69 E-value=20 Score=35.52 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 249 y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|.+|+.+.++.|..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45667777777765543222223445566667999999999999999999998875
No 292
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=47.63 E-value=15 Score=27.66 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 017388 236 LSALAEVALEREDIETSLSDYQKALTIL 263 (372)
Q Consensus 236 ~~~LGev~~e~~~y~~Al~~y~~AL~I~ 263 (372)
...+|+.++..|+++.|+.+|-+||.++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3579999999999999999999888764
No 293
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=46.67 E-value=1.7e+02 Score=26.49 Aligned_cols=27 Identities=0% Similarity=0.143 Sum_probs=12.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017388 291 PQEAIPYCQKAISVCKSRVQRLLNEVK 317 (372)
Q Consensus 291 ~~eAi~~~ekAl~i~~~rl~~l~~~~~ 317 (372)
.+..+.-++.-|.-.+.++.+.+.++.
T Consensus 58 ~~~~~~~~e~~i~~~~~ri~~~~~~l~ 84 (256)
T 3na7_A 58 LKLQVSKNEQTLQDTNAKIASIQKKMS 84 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555555544443
No 294
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=46.16 E-value=1.1e+02 Score=25.22 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChh
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALE 106 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe 106 (372)
.+.+...+.+++.++..|+|+++.....+|..|...+-.-..++
T Consensus 33 ydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L~~sLd~e 76 (131)
T 3iqc_A 33 YEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYE 76 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTBCHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 45788889999999999999999999999999988775554444
No 295
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=46.09 E-value=1.9e+02 Score=28.30 Aligned_cols=70 Identities=9% Similarity=0.068 Sum_probs=39.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017388 246 REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKS 318 (372)
Q Consensus 246 ~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~ 318 (372)
.-+|...|..++.-|.-+.+..-..+..+-.++..|.--+....+.+..+..| ..-++.||..|+..+..
T Consensus 62 er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~---s~eLe~~i~~lk~~V~~ 131 (390)
T 1deq_A 62 DQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQI---NEDLRSRIEILRRKVIE 131 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 35666777777777776666654444455555555555555555555544433 34445566666665554
No 296
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=45.67 E-value=49 Score=28.53 Aligned_cols=80 Identities=11% Similarity=0.097 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHhCC
Q 017388 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 289 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~-~r~iAe~~~~Lg~a~~~~~ 289 (372)
.+|+.+...|..... +.+....++..+++.. ++ +.. |...+.... -..+|.-|-..|..|...|
T Consensus 44 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~-------if~~L~~~~IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 44 TLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLD-------MYSYLHNQGIGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHH-------HHHHHHHTTSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHH-------HHHHHHHCCcchhhHHHHHHHHHHHHHcC
Confidence 368888888866543 3578899999988874 22 333 333332211 2457899999999999999
Q ss_pred CchHHHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISVC 305 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i~ 305 (372)
+|.+|...|+.+|.-.
T Consensus 111 ~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 111 NFRKADAIFQEGIQQK 126 (164)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999998643
No 297
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=44.88 E-value=66 Score=31.87 Aligned_cols=44 Identities=7% Similarity=-0.000 Sum_probs=34.8
Q ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 017388 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI 262 (372)
Q Consensus 219 r~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I 262 (372)
+.+|++.+...+....++...+......|+++.|...|++|+..
T Consensus 199 ~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 199 HFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 34555544333445889999999999999999999999999987
No 298
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=43.52 E-value=45 Score=28.39 Aligned_cols=80 Identities=14% Similarity=0.015 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHhCC
Q 017388 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 289 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~-~r~iAe~~~~Lg~a~~~~~ 289 (372)
.+|+.+...|..... +.+....++...++.. ++ ...|..-+.... -..+|.-|-..|..+...|
T Consensus 49 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~d-------p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 115 (152)
T 4a1g_A 49 TLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SD-------LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQG 115 (152)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SC-------HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CC-------HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcC
Confidence 678999888865443 3578888888888764 11 344444444322 3467899999999999999
Q ss_pred CchHHHHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISVC 305 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i~ 305 (372)
++.+|...|+.+|.-.
T Consensus 116 ~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 116 ELQHASAVLQRGIQNQ 131 (152)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999998753
No 299
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=43.25 E-value=42 Score=34.15 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCc
Q 017388 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (372)
Q Consensus 249 y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~ 291 (372)
-..|+.+|++|+..++++-..+++.....|.+++--|+..|+|
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Confidence 3789999999999999999999999999999999888877764
No 300
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=42.42 E-value=1.3e+02 Score=33.64 Aligned_cols=63 Identities=8% Similarity=-0.012 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCc-hHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP-QEAIPYCQKAI 302 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~-~eAi~~~ekAl 302 (372)
..+|+.|=.-++..|++++|+..|.+-. ..-+.|+ ..+|..|=.+|++.|+. ++|...|+.-.
T Consensus 165 vvTYNtLI~Glck~G~~~eA~~Lf~eM~---~~G~~PD----vvTYntLI~glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 165 LDMYNAVMLGWARQGAFKELVYVLFMVK---DAGLTPD----LLSYAAALQCMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH---HTTCCCC----HHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCHHHHHHHHHHHH---HcCCCCc----HHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5689999999999999999999998653 3333343 36677777788888885 67888887755
No 301
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=42.13 E-value=23 Score=35.12 Aligned_cols=56 Identities=16% Similarity=0.011 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 249 y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 45556666666654332111123334556667999999999999999998888763
No 302
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.88 E-value=1.1e+02 Score=24.95 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHH---HHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK---AISVCKSRV 309 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ek---Al~i~~~rl 309 (372)
|-.|.+-|.-.=+.|+-+.|+.+|++.+.-+.+-+.-.... .+ .....|+.|..+-+| -+...+.||
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~-~~---------~~g~~we~Ar~lq~KM~~nL~~v~~RL 91 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKE-SE---------HTGPGWESARQMQQKMKETLQNVRTRL 91 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCC-TT---------CCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccC-CC---------CCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555566888888888888887776543221100 00 122345777666655 445556677
Q ss_pred HHHHHHHH
Q 017388 310 QRLLNEVK 317 (372)
Q Consensus 310 ~~l~~~~~ 317 (372)
..|.....
T Consensus 92 ~~Le~~~~ 99 (116)
T 2dl1_A 92 EILEKGLA 99 (116)
T ss_dssp HHHHHHHC
T ss_pred HHHHhcCC
Confidence 76654443
No 303
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=40.34 E-value=79 Score=24.98 Aligned_cols=65 Identities=12% Similarity=0.091 Sum_probs=42.7
Q ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 017388 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (372)
Q Consensus 230 ~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl 309 (372)
+..|.-.+.-+...+..++|..|.-..++|.-=- .|+.+-....+-.+++.-.++.|.+++..|
T Consensus 31 l~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe~DA----------------rLAeAka~~~Ka~~~~~el~~~I~~LrqEl 94 (98)
T 4fm3_A 31 LKLAQDKYAAAQIAMTAESYKKARLLAEQAELDA----------------RLAESKVLTQKSKDQLGELDKSLKRLRKQL 94 (98)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHhH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888888999999999999998888765432 344444443344455555555555555444
Q ss_pred H
Q 017388 310 Q 310 (372)
Q Consensus 310 ~ 310 (372)
+
T Consensus 95 ~ 95 (98)
T 4fm3_A 95 G 95 (98)
T ss_dssp C
T ss_pred c
Confidence 3
No 304
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=39.90 E-value=37 Score=33.62 Aligned_cols=55 Identities=15% Similarity=0.011 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhcCC-----CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 250 ETSLSDYQKALTILERMVEP-----DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 250 ~~Al~~y~~AL~I~~~l~~~-----~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
++-+.+++.|+.++...... .+..-.-++.-|+.+|.+.++|++|+.+.+++|..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 45566677776665322111 12334556667999999999999999999988864
No 305
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=38.79 E-value=2.5e+02 Score=26.37 Aligned_cols=90 Identities=9% Similarity=-0.080 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHHHhcCC---CChhHHHHHHHHH
Q 017388 214 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQ--------KALTILERMVEP---DSRHIAELNFRIC 282 (372)
Q Consensus 214 ~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~--------~AL~I~~~l~~~---~~r~iAe~~~~Lg 282 (372)
++..|..-..+..+.+..-.+.|..+|.++.+-++|.+|..||- .+..+.-..... ..+.-+..+...+
T Consensus 115 fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~Ra 194 (312)
T 2wpv_A 115 VITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRL 194 (312)
T ss_dssp HHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHH
Confidence 34555555555544445567899999999999999999999883 344444444332 4455566654444
Q ss_pred -HHHHhCCCchHHHHHHHHHHH
Q 017388 283 -LCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 283 -~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.|-..++...|...|..-+.
T Consensus 195 VL~yL~l~n~~~A~~~~~~f~~ 216 (312)
T 2wpv_A 195 VFNYLFISNISFAHESKDIFLE 216 (312)
T ss_dssp HHHHHHTTBHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHH
Confidence 355667777777666654433
No 306
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=38.28 E-value=46 Score=25.68 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q 017388 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRA 92 (372)
Q Consensus 60 ~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~A 92 (372)
...++.|..++.-|+-++..||+..|..|++=|
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 466788999999999999999998887665433
No 307
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=38.24 E-value=61 Score=27.24 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh------CCCChhHHHHHHHHHHHHHH
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY------GELALECVNAYYQYGRALLY 120 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~------Ge~~pe~A~~y~~yG~ALl~ 120 (372)
.+-+...+.+++.++..|||+.+-....+|..|...+- |+.+..+..+|-++-+-|+.
T Consensus 30 ydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~egeiA~nL~~LY~y~~~~L~~ 93 (145)
T 1vh6_A 30 YNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRLVQ 93 (145)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 45688889999999999999999999999998875543 55666666666666666653
No 308
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=37.50 E-value=48 Score=25.62 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=27.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 017388 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALE 94 (372)
Q Consensus 59 ~~~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Ale 94 (372)
-...++.|..++.-|+-++..||+..|..|++=|-.
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~G 67 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHG 67 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356678889999999999999999888777654433
No 309
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=37.45 E-value=61 Score=36.19 Aligned_cols=68 Identities=7% Similarity=-0.097 Sum_probs=55.9
Q ss_pred cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 017388 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (372)
Q Consensus 231 ~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl 302 (372)
..-.+|+.|=+.++..|+.++|...|..--.+..+-+.++ ..+|.-|=..|+..|++++|+..|+.-.
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~ 192 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVK 192 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999987766554433332 3689999999999999999999998764
No 310
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=37.16 E-value=70 Score=26.00 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVS 98 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~ 98 (372)
.+.+|..-+..++..+..|.|+.|+-..++|++...+
T Consensus 12 ~~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~EkalK 48 (135)
T 1o3u_A 12 HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVK 48 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 4778999999999999999999999999999998643
No 311
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=36.02 E-value=1.9e+02 Score=24.16 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhH
Q 017388 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI 274 (372)
Q Consensus 231 ~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~i 274 (372)
..|..+...|.+|...||+++|--.|-+-+.|...+ +.||..
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdy 81 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDF 81 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcch
Confidence 357777888999999999999999999999999533 366653
No 312
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=35.67 E-value=53 Score=32.77 Aligned_cols=56 Identities=13% Similarity=0.088 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCC---CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 249 IETSLSDYQKALTILERMVEP---DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 249 y~~Al~~y~~AL~I~~~l~~~---~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
|++-+.+++.|+.++...++. .+..-.-++.-|+.+|.+.++|.+|+.+.+++|..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 455667777777665332221 12334556667999999999999999999999875
No 313
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=35.26 E-value=76 Score=25.07 Aligned_cols=37 Identities=19% Similarity=0.072 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVS 98 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~ 98 (372)
-+.+|..-+..++..+..|.|+.|+-..++|++...+
T Consensus 7 wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek~lK 43 (122)
T 1wol_A 7 WIKQAERDLEEARYAKSGGYYELACFLSQQCAEKAVK 43 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999998654
No 314
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=35.22 E-value=75 Score=22.32 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017388 232 KVDILSALAEVALEREDIETSLSDYQKALTILER 265 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~ 265 (372)
.|+=|...+.-.+.-++...|+..+++||.++..
T Consensus 19 ~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~~ 52 (53)
T 2rkl_A 19 QIQKLAKYAISALNYEDLPTAKDELTKALDLLNS 52 (53)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhc
Confidence 4566778888889999999999999999999763
No 315
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=35.14 E-value=2.9e+02 Score=26.23 Aligned_cols=48 Identities=6% Similarity=-0.177 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHh
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ 121 (372)
...+..+...++..|++.+|+..+.+++.. ||-.=.+|..+=.+|+..
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~--------~P~~E~~~~~lm~al~~~ 218 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFE--------HPYREPLWTQLITAYYLS 218 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc
Confidence 344556677888999999999999988877 677667777777777733
No 316
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=34.68 E-value=8.2 Score=38.17 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
.+..|..|+.+|..+...|+|.+|+.+|..|++.+...
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999998754
No 317
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=33.72 E-value=19 Score=22.76 Aligned_cols=17 Identities=24% Similarity=0.390 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHhhHHH
Q 017388 348 LTDKEAEIETLSGLCGD 364 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~d 364 (372)
++.++.|+.-|++|+++
T Consensus 16 ~~~le~EV~Rl~~ll~~ 32 (33)
T 2wq1_A 16 IYHNTNEIARNTKLVGE 32 (33)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 56889999999999863
No 318
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=33.46 E-value=88 Score=24.60 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017388 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (372)
Q Consensus 61 ~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~ 96 (372)
.-+.+|...+..++..+..|+|+.|+.....|+...
T Consensus 7 ~~l~~A~~~L~~A~~~~~~g~y~~a~~~ay~a~~~a 42 (126)
T 2hsb_A 7 LRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHA 42 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 357889999999999999999999999888888875
No 319
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=33.03 E-value=44 Score=30.30 Aligned_cols=90 Identities=10% Similarity=0.063 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHhCC
Q 017388 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 289 (372)
Q Consensus 213 e~Le~Ar~I~ek~~~--~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~-~r~iAe~~~~Lg~a~~~~~ 289 (372)
.+|+.+..-|..... +.+....++..+++.. +.+.. |+.-++... -..+|.-|-..|..|...|
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~------~~p~~-------if~~L~~~~IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNYI------DEPVE-------LFSFLAHHHIGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTC------SCHHH-------HHHHHHHTTCSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHcc------CCHHH-------HHHHHHHCCcchhHHHHHHHHHHHHHHcC
Confidence 568888888866543 3578889998888742 23333 333332211 2457899999999999999
Q ss_pred CchHHHHHHHHHHHH-------HHHHHHHHHHH
Q 017388 290 KPQEAIPYCQKAISV-------CKSRVQRLLNE 315 (372)
Q Consensus 290 ~~~eAi~~~ekAl~i-------~~~rl~~l~~~ 315 (372)
+|.+|...|+..|.- ++.+....+.+
T Consensus 165 ~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 165 LFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHR 197 (223)
T ss_dssp CHHHHHHHHHHHHHHTCBSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 999999999999864 35555666666
No 320
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=32.34 E-value=93 Score=34.40 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------HHhcC--CCChhHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 017388 236 LSALAEVALEREDIETSLSDYQKALTIL-------------ERMVE--PDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (372)
Q Consensus 236 ~~~LGev~~e~~~y~~Al~~y~~AL~I~-------------~~l~~--~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ek 300 (372)
-+.+|.+++..|+|++|..+|++|-.-. ..+.+ .....++.=|+.+...+...+.++-++..-+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4789999999999999999998872110 00100 11223445577788899999999999999999
Q ss_pred HHHHH
Q 017388 301 AISVC 305 (372)
Q Consensus 301 Al~i~ 305 (372)
||...
T Consensus 925 Ai~~~ 929 (1139)
T 4fhn_B 925 ADASK 929 (1139)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98754
No 321
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=31.89 E-value=2.7e+02 Score=24.68 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=50.2
Q ss_pred cHHHHHHHHHHHHHhcCCHHHHHHHHHHHH------------HHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHH
Q 017388 231 EKVDILSALAEVALEREDIETSLSDYQKAL------------TILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (372)
Q Consensus 231 ~~A~~~~~LGev~~e~~~y~~Al~~y~~AL------------~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ 298 (372)
+.+....--.-.+-...+|..|+..+++-| +|+.-++.+.+.. --+.-+|..+...|..++||.||
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE--fFy~l~a~lltq~g~r~EaI~y~ 137 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE--FFESLLGDLCTLSGYREEGIGHY 137 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH--HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH--HHHHHHHHHHHHhcCHHHhhhHh
Confidence 344444445566778889999999998887 2223334344432 23445899999999999999999
Q ss_pred HHHHHH
Q 017388 299 QKAISV 304 (372)
Q Consensus 299 ekAl~i 304 (372)
..+-.+
T Consensus 138 ~~Sf~~ 143 (242)
T 3kae_A 138 VRSFGK 143 (242)
T ss_dssp HHHHHH
T ss_pred hhhcCC
Confidence 988764
No 322
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=31.64 E-value=79 Score=25.02 Aligned_cols=36 Identities=22% Similarity=0.168 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~ 97 (372)
-+.+|..-+..++..+..|.|+.|+-..++|++...
T Consensus 7 w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek~l 42 (127)
T 1ufb_A 7 WLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEAAL 42 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 467888889999999999999999999999999864
No 323
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=31.39 E-value=1e+02 Score=29.68 Aligned_cols=36 Identities=19% Similarity=0.137 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 017388 273 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (372)
Q Consensus 273 ~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~r 308 (372)
..|.+||..|......+++.+||.+++.|+..++.-
T Consensus 250 ~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 285 (363)
T 3rau_A 250 FAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEA 285 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999999999999999877643
No 324
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=31.27 E-value=3e+02 Score=26.89 Aligned_cols=74 Identities=11% Similarity=0.120 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH------hcCCCC-----------------------------hhHHHHH
Q 017388 234 DILSALAEVALEREDIETSLSDYQKALTILER------MVEPDS-----------------------------RHIAELN 278 (372)
Q Consensus 234 ~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~------l~~~~~-----------------------------r~iAe~~ 278 (372)
.-+..|++.+.+.+||.+|.-++-.+..+.-. +++-+. ..+-..+
T Consensus 12 ~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll 91 (428)
T 2wm9_A 12 TWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELL 91 (428)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHH
Confidence 34678999999999999999998766554443 222111 1122245
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 017388 279 FRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (372)
Q Consensus 279 ~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~ 307 (372)
......+...+.|+.|+..|+..+.+++.
T Consensus 92 ~~ai~~f~kg~~~E~ai~~~k~L~~~ye~ 120 (428)
T 2wm9_A 92 EQCADGLWKAERYELIADIYKLIIPIYEK 120 (428)
T ss_dssp HHHHHHHHHTTCGGGHHHHHTTTHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 55556677777889999988888877774
No 325
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=30.45 E-value=84 Score=26.14 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=22.8
Q ss_pred HHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017388 285 LEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKS 318 (372)
Q Consensus 285 ~~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~ 318 (372)
|..-..+++|+.+|++=++.++.++..+...+..
T Consensus 90 ~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~ 123 (151)
T 2zdi_C 90 YAVERSIDEAISFLEKRLKEYDEAIKKTQGALAE 123 (151)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333445888888888777777777777655443
No 326
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=30.06 E-value=52 Score=27.30 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY 100 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~ 100 (372)
++.|..++..|.-++..||+.+|.+-|=+|++-..+.+
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeeaiKAL 41 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEAIKLL 41 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999998888766543
No 327
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=29.44 E-value=34 Score=21.63 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHhhHHH
Q 017388 348 LTDKEAEIETLSGLCGD 364 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~d 364 (372)
++.++.|+.-|++||+.
T Consensus 16 ~~~Le~EV~RLk~lL~~ 32 (33)
T 3c3g_A 16 XYHXENXLARIKXLLXE 32 (33)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHHHHHcc
Confidence 46889999999999864
No 328
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=29.24 E-value=1.7e+02 Score=27.90 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNA 110 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~ 110 (372)
++......+..|.+++..|+|.+|+.+|...|-...=.-=+...+..++
T Consensus 110 ~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~ 158 (325)
T 3mv2_A 110 GLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLA 158 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHH
Confidence 5566667888999999999999999999999988643322333444444
No 329
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=28.77 E-value=1e+02 Score=25.39 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHCCCH-HHH---HHHHHHHHHHHHHhhCCCC
Q 017388 63 VEFADELMEKGTNALKESDY-GEA---AECFSRALEIRVSHYGELA 104 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy-~eA---v~~~~~Alel~~~~~Ge~~ 104 (372)
.+.+...+.+++.++..|+| +.+ -....+|..|...+-....
T Consensus 26 ydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd 71 (130)
T 1orj_A 26 YDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLD 71 (130)
T ss_dssp HHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45688888899999999999 999 8889999999877754433
No 330
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=28.52 E-value=78 Score=27.00 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCc
Q 017388 212 WKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (372)
Q Consensus 212 we~Le~Ar~I~ek~~~~~~~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~ 291 (372)
...|..|+..+.+.....+.+..+...|..++....+....+..|...+ ..+..++..+.-+|...+....+|
T Consensus 69 ~~~L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~l-------e~DP~rL~~ie~RL~~l~~L~RKy 141 (175)
T 4abx_A 69 AGLIGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGS-------AADPEALDRVEARLSALSKLKNKY 141 (175)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3344455555554444445566666666666666555555555544333 334445777777777777666655
Q ss_pred h
Q 017388 292 Q 292 (372)
Q Consensus 292 ~ 292 (372)
.
T Consensus 142 g 142 (175)
T 4abx_A 142 G 142 (175)
T ss_dssp C
T ss_pred C
Confidence 3
No 331
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=28.10 E-value=58 Score=20.97 Aligned_cols=18 Identities=11% Similarity=0.088 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHhhHHHH
Q 017388 348 LTDKEAEIETLSGLCGDL 365 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~dl 365 (372)
.+.++.|+.-|++|++.-
T Consensus 17 ~~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 17 LWHLKNKVARLKKKNAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccc
Confidence 468899999999999864
No 332
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.40 E-value=80 Score=31.15 Aligned_cols=31 Identities=13% Similarity=-0.074 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
-.-++.-|+.+|.+.++|++|+.++++.|..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4556667999999999999999999888864
No 333
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=27.33 E-value=69 Score=30.61 Aligned_cols=35 Identities=14% Similarity=0.031 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017388 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (372)
Q Consensus 62 ~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~ 96 (372)
++......+..|.+++..|+|.+|+.+|...|-..
T Consensus 98 ~l~~l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 98 KLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSV 132 (320)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 45555667899999999999999999999998875
No 334
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.05 E-value=81 Score=25.69 Aligned_cols=30 Identities=20% Similarity=0.086 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 276 ELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 276 e~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
..|.+-|+.+...++.+.|+.+|++.|.-+
T Consensus 23 F~~Is~AL~~DE~g~k~~Al~lYk~GI~eL 52 (116)
T 2dl1_A 23 FLFVNKGLNTDELGQKEEAKNYYKQGIGHL 52 (116)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Confidence 333344444444466666666666655443
No 335
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=26.98 E-value=40 Score=21.44 Aligned_cols=17 Identities=24% Similarity=0.276 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHhhHHH
Q 017388 348 LTDKEAEIETLSGLCGD 364 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~d 364 (372)
++.++.|+.-|++||+.
T Consensus 17 ~~~Le~EV~RLk~ll~~ 33 (34)
T 3c3f_A 17 LYHXENEXARIXKLLXE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 46889999999999864
No 336
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=26.51 E-value=1.3e+02 Score=23.90 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
.|..+.-.+-.+.+.|+|++|-.++.+|=+.+.+-
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 53 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSCIAEA 53 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 46777777888889999999999999998876543
No 337
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=26.07 E-value=1.3e+02 Score=23.72 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
.|..+.-.+-.+.+.|+|++|-.++.+|=+.+.+-
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 51 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEA 51 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 46777778888889999999999999998876543
No 338
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=25.77 E-value=72 Score=24.77 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhC---CCchHHHHHHHHHHHHHH
Q 017388 274 IAELNFRICLCLEIG---SKPQEAIPYCQKAISVCK 306 (372)
Q Consensus 274 iAe~~~~Lg~a~~~~---~~~~eAi~~~ekAl~i~~ 306 (372)
-|..|.+-|+..... |+.+.|+.+|++.|.-+.
T Consensus 15 ~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~ 50 (89)
T 3eab_A 15 QAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELE 50 (89)
T ss_dssp HHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHH
Confidence 345555566666666 777788888877765443
No 339
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=24.46 E-value=53 Score=23.11 Aligned_cols=17 Identities=24% Similarity=0.436 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHhhcc
Q 017388 305 CKSRVQRLLNEVKSLGE 321 (372)
Q Consensus 305 ~~~rl~~l~~~~~~~~~ 321 (372)
++.++..|++.|+.+.+
T Consensus 30 lkkkweelkkkieelgg 46 (67)
T 1lq7_A 30 LKKKWEELKKKIEELGG 46 (67)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 45566666666666654
No 340
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=24.42 E-value=1.6e+02 Score=19.94 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=23.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017388 289 SKPQEAIPYCQKAISVCKSRVQRLLNEVKS 318 (372)
Q Consensus 289 ~~~~eAi~~~ekAl~i~~~rl~~l~~~~~~ 318 (372)
|++++=+...+.+++++..|+++|-.+..+
T Consensus 1 ~dlEekv~~Le~~ld~LqTr~ArLlae~~s 30 (46)
T 3swy_A 1 GALEEKVEQLGSSLDTLQTRFARLLAEYNA 30 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888899999999999999666554
No 341
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=24.17 E-value=1.3e+02 Score=23.32 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCcccccccccccchhccchhhhHHHHHHHHHHhhHHHHHhhh
Q 017388 304 VCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEKKA 369 (372)
Q Consensus 304 i~~~rl~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Ei~el~~ll~dl~~Ki 369 (372)
++...|..|+..|..... ....++.||..|...+.+++.||
T Consensus 53 ~ye~~i~~Lr~~i~~~~~-------------------------ek~~l~~e~dnl~~~~~~~k~KL 93 (93)
T 3s4r_A 53 LYEEEMRELRRQVDQLTN-------------------------DKARVEVERDNLAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHhhC
Confidence 355666677776666532 23567888999999999998885
No 342
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=24.11 E-value=85 Score=25.91 Aligned_cols=37 Identities=8% Similarity=-0.040 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
+.+|..-+..++..+..|+|+.|+-..++|++...+-
T Consensus 13 l~~A~~dl~~A~~~~~~g~y~~a~F~aqQA~Ek~lKa 49 (141)
T 3o10_A 13 LRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIA 49 (141)
T ss_dssp HHHHHHHHHHHGGGTTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHhhHHhhCccceEeeehhHHHHHHHHH
Confidence 6677777777788888999999999999999986543
No 343
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=23.94 E-value=51 Score=20.98 Aligned_cols=16 Identities=25% Similarity=0.173 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHhhHH
Q 017388 348 LTDKEAEIETLSGLCG 363 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~ 363 (372)
...++.|+.-|++||+
T Consensus 17 n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 17 NXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHh
Confidence 4678999999999985
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=23.85 E-value=1e+02 Score=33.57 Aligned_cols=27 Identities=7% Similarity=0.153 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 017388 233 VDILSALAEVALEREDIETSLSDYQKAL 260 (372)
Q Consensus 233 A~~~~~LGev~~e~~~y~~Al~~y~~AL 260 (372)
+.+ +.+|.+++..|+|++|..+|++|-
T Consensus 841 ~~~-yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 841 IAV-YLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHH-HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 444 679999999999999999999764
No 345
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=23.82 E-value=2.3e+02 Score=22.13 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH-HHHHHHH
Q 017388 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELN-FRICLCL 285 (372)
Q Consensus 232 ~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~-~~Lg~a~ 285 (372)
-|+....-|.-+.+.+||.+|+..|++++.+- +++-|-.++ |-|+-|-
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t------en~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLS------DNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccc------cCHHHHHHHHHHHHHHH
Confidence 46667777778899999999999999998653 455555555 5566553
No 346
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=23.57 E-value=59 Score=32.27 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHh--cCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 251 TSLSDYQKALTILERM--VEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 251 ~Al~~y~~AL~I~~~l--~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+-+.+++.|+.++... .|.-++ .-++.-|+.+|.+.++|++|+.++++.|.
T Consensus 156 ~I~~DL~~A~~~Lp~~~~~gr~tk--~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 156 QAKEDLKTAASLLPITNKIGKPTQ--GAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHSCSSCSTTSCCH--HHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHhCCCCCCCCcccH--HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3445555555543221 122223 34555599999999999999988877653
No 347
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=23.55 E-value=1.6e+02 Score=23.58 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
.|..+.-.+-.+.+.|+|++|-.++.+|=+.+.+-
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~A 55 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEA 55 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 46777777888889999999999999997766543
No 348
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=23.45 E-value=2e+02 Score=29.65 Aligned_cols=63 Identities=11% Similarity=0.019 Sum_probs=46.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHH
Q 017388 241 EVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (372)
Q Consensus 241 ev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l 312 (372)
...+..+++..|...|. .++...+..+..+|-+|.++...|+..+|..+|+++..- ..-.+-|
T Consensus 293 r~Alr~~d~~~a~~~~~--------~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~-~~fYg~l 355 (618)
T 1qsa_A 293 RMALGTGDRRGLNTWLA--------RLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQ-RGFYPMV 355 (618)
T ss_dssp HHHHHHTCHHHHHHHHH--------HSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-CSHHHHH
T ss_pred HHHHHCCCHHHHHHHHH--------HccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcC-CChHHHH
Confidence 34566788888888773 233344556888999999999999999999999998763 3444444
No 349
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=23.33 E-value=1.6e+02 Score=24.09 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 65 ~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
.|+.+.-.+-.+.+.|+|++|-.++.+|=+.+.+-
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~~A 70 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEANDELLKA 70 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 46677777778888999999999999997766543
No 350
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=23.20 E-value=49 Score=21.07 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHhhHHH
Q 017388 348 LTDKEAEIETLSGLCGD 364 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~d 364 (372)
...++.|+.-|++||++
T Consensus 17 ~~~L~~EV~RLk~lL~~ 33 (34)
T 2bni_A 17 GHHICNELARIKKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHHhcc
Confidence 46889999999999874
No 351
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=23.04 E-value=1.6e+02 Score=30.46 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHhhhhh
Q 017388 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEE 125 (372)
Q Consensus 66 a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~~y~~yG~ALl~~ar~e 125 (372)
+..++.+|+.++..|+|.-|+.+...++-. .|+...+......+|-.+|...
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~--------~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFA--------EPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHHHHhc
Confidence 567889999999999999999999998876 6888888888888888877543
No 352
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=22.87 E-value=1.2e+02 Score=30.07 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Q 017388 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (372)
Q Consensus 63 ~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~ 99 (372)
+.++..++..|...+..||+..|..++++|..+..+.
T Consensus 379 ~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~~ 415 (464)
T 4fx5_A 379 QAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVES 415 (464)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 5567888899999999999999999999999997543
No 353
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=22.75 E-value=58 Score=25.54 Aligned_cols=76 Identities=17% Similarity=0.216 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 017388 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNE 315 (372)
Q Consensus 236 ~~~LGev~~e~~~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~~~rl~~l~~~ 315 (372)
...+-.+......+..-+..+..++.=...+. ++. .+|+.+|-+|-.. ..++|+...++-++.+..+|..|...
T Consensus 19 ~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~-~d~----~vy~~iG~vfv~~-~~~ea~~~L~~~~e~ie~~i~~le~~ 92 (117)
T 2zqm_A 19 QQQLQLVVQQKQKVQLELTEAKKALDEIESLP-DDA----VVYKTVGTLIVKT-TKDKAVAELKEKIETLEVRLNALERQ 92 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-TTC----CEEEEETTEEEEE-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCc----HhHHHhhHHHhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444445555555555555544442 222 3667777665444 34788888888888877777777655
Q ss_pred HH
Q 017388 316 VK 317 (372)
Q Consensus 316 ~~ 317 (372)
+.
T Consensus 93 ~~ 94 (117)
T 2zqm_A 93 EK 94 (117)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 354
>2pjw_V Vacuolar protein sorting-associated protein 27; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=22.30 E-value=1.6e+02 Score=22.78 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 017388 248 DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (372)
Q Consensus 248 ~y~~Al~~y~~AL~I~~~l~~~~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i 304 (372)
+..+--..|.++..++.++. |.+..+..+.........++..|...|.+-|+-
T Consensus 31 ~d~~LqeLy~kv~~lRPKL~----r~l~~~~~K~~~L~~mn~Kls~a~rlYD~lLE~ 83 (91)
T 2pjw_V 31 EDSKLQNLAQRVFASKARLN----YALNDKAQKYNTLIEMNGKISEIMNIYDRLLEQ 83 (91)
T ss_dssp TTTHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667788999999999985 778888888888888888999999999877665
No 355
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.10 E-value=1.1e+02 Score=30.82 Aligned_cols=29 Identities=0% Similarity=-0.186 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 275 AELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 275 Ae~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
.-++.-|+.+|.+.+++.+|+.++++.|.
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34555589999999999999999888776
No 356
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=21.98 E-value=61 Score=20.88 Aligned_cols=19 Identities=21% Similarity=0.181 Sum_probs=15.9
Q ss_pred hhHHHHHHHHHHhhHHHHH
Q 017388 348 LTDKEAEIETLSGLCGDLE 366 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~dl~ 366 (372)
++.++.|+.-|++|+++-+
T Consensus 17 ~~~Le~EV~RL~~ll~~~e 35 (36)
T 1kd8_A 17 VWHLENEVARLEKENAECE 35 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccc
Confidence 5788999999999998743
No 357
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=21.85 E-value=1.1e+02 Score=30.46 Aligned_cols=54 Identities=13% Similarity=0.085 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CChhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 017388 250 ETSLSDYQKALTILERMVEP---DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (372)
Q Consensus 250 ~~Al~~y~~AL~I~~~l~~~---~~r~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~ 303 (372)
+.-+.+++.|+..+....+. ....-.-++.-|+.+|.+.+++.+|+.++++.|.
T Consensus 154 ~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 154 DFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666544321111 1223344566699999999999999999998885
No 358
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.36 E-value=4.3e+02 Score=25.20 Aligned_cols=57 Identities=16% Similarity=0.041 Sum_probs=44.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCc-cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 017388 206 SDLDLAWKMLDVARAIAEKHWGDSM-EKVDILSALAEVALEREDIETSLSDYQKALTI 262 (372)
Q Consensus 206 ~dl~~Awe~Le~Ar~I~ek~~~~~~-~~A~~~~~LGev~~e~~~y~~Al~~y~~AL~I 262 (372)
+++..|...++.+..++....+..+ -.+..|...+..+...++|..+-.++-..|..
T Consensus 141 ~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 141 NDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 5788889999999988887755443 46788888999999999998877766666554
No 359
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=20.77 E-value=2e+02 Score=24.10 Aligned_cols=47 Identities=9% Similarity=0.020 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhCCCChhHHH
Q 017388 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVN 109 (372)
Q Consensus 61 ~~~~~a~~L~~~G~~~~~~gdy~eAv~~~~~Alel~~~~~Ge~~pe~A~ 109 (372)
--+..|..|+..+..+...||++.|--+|-+-+.+.. .. ..||+.-.
T Consensus 37 ~y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~-kI-pkHpdyk~ 83 (144)
T 2a9u_A 37 SYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVYN-LI-KKRPDFKQ 83 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HH-TTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HH-hcCcchhh
Confidence 3477899999999999999999999999999999974 22 45676543
No 360
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=20.73 E-value=90 Score=21.91 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHhhHHHHHhhhcCC
Q 017388 348 LTDKEAEIETLSGLCGDLEKKASPI 372 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~dl~~Kied~ 372 (372)
...++.+|..|+.+|..|+..|.+.
T Consensus 46 ~~~L~~ri~~Le~~l~~l~~~l~~~ 70 (70)
T 1zme_C 46 LQQLQKDLNDKTEENNRLKALLLER 70 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5678999999999999999998863
No 361
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=20.54 E-value=61 Score=20.51 Aligned_cols=16 Identities=31% Similarity=0.356 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHhhHH
Q 017388 348 LTDKEAEIETLSGLCG 363 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~ 363 (372)
.+.++.|+.-|++||.
T Consensus 16 n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 16 NWNLENEVARLKKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhh
Confidence 4688999999999874
No 362
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=20.35 E-value=94 Score=27.24 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 017388 273 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (372)
Q Consensus 273 ~iAe~~~~Lg~a~~~~~~~~eAi~~~ekAl~i~ 305 (372)
+.+.=+|-+|..+...++|.+|-.+|..|+.-+
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~ 44 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 44 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC
Confidence 456778899999999999999999999999864
No 363
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=20.31 E-value=64 Score=20.51 Aligned_cols=17 Identities=12% Similarity=0.161 Sum_probs=14.4
Q ss_pred hhHHHHHHHHHHhhHHH
Q 017388 348 LTDKEAEIETLSGLCGD 364 (372)
Q Consensus 348 ~~~~~~Ei~el~~ll~d 364 (372)
.+.++.|+.-|++|+++
T Consensus 17 ~~~Le~eV~RL~~ll~~ 33 (34)
T 2hy6_A 17 NYHLANAVARLAKAVGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 46889999999999874
Done!