Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>017396
MKATSIFLLAFFLVLLVNGCSAADKTNFSASSGLDPNLIGSRSSNDTTGGSNLVTNSSQT
KNVNGNRGDQVNKSVKGADDKNGINKNNTFHPLGSKNADNVQKGNVVPKGKKELSDRKDN
LSDEVKSKDVSKEGGPDEDSGKSRKEGTRVEECHSSNKCMDEKMQFVACLRVPGNDSPDL
SLLIQNKVKGPLTVRISAPDYVRLEKTKVQLRENEGNELRVSIRRKGTVNLITIKAGNGN
CRLDFKDLMAHNSGEDFDNSLKSTYFKFLSKKPTVPVITFAALLILASGCLCVSLRCRQL
SSGKSKYQRLDMEVPVASLGNSESDNNHGWDNSWDDNWDDEEAPKTPSLPVTPSLSSKGL
ASRRLSKEGWKD

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017396
        (372 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956308 - symbol:AT1G64385 "AT1G64385" speci...   397  6.3e-37   1


>TAIR|locus:504956308 [details] [associations]
            symbol:AT1G64385 "AT1G64385" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
            GO:GO:0005794 GO:GO:0005768 GO:GO:0005802 EMBL:BT002496
            EMBL:BT008738 EMBL:AK227045 IPI:IPI00522901 RefSeq:NP_683468.1
            UniGene:At.20348 PaxDb:Q8GUH9 PRIDE:Q8GUH9
            EnsemblPlants:AT1G64385.1 GeneID:842746 KEGG:ath:AT1G64385
            TAIR:At1g64385 eggNOG:NOG244312 HOGENOM:HOG000090382
            InParanoid:Q8GUH9 OMA:NNWGDDW PhylomeDB:Q8GUH9
            ProtClustDB:CLSN2690478 Genevestigator:Q8GUH9 Uniprot:Q8GUH9
        Length = 351

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 121/336 (36%), Positives = 169/336 (50%)

Query:    53 LVTNSSQTKNVNGNRGDQVNKSVKGADDKNGINKNNTFHPLGSKNADNVQKGNVVPKGKK 112
             +V+NS+ T    G   + V  S      K+ I  +   H   S N D+ Q G+    G K
Sbjct:    28 VVSNSNLTDTRFGGGSENVTDS----SSKSIITID---HSKNSTNDDDTQLGD----GSK 76

Query:   113 EL-SDRKDNLSDEVKSKDVSKEGGPDEDSGKSRK-EGTRVEECHSSNKCMDEKMQFVACL 170
              + SD   +   ++ S +  KE         SRK +G   EEC  SN C+D++ +F ACL
Sbjct:    77 MIGSDSSKSDQGKIASDESDKEEEEAVSKNSSRKKQGFHGEECDPSNMCIDDEHEFSACL 136

Query:   171 RVPGNDSPDLSLLIQNKVKGPLTVRISAPDYVRLEKTKVQLRENEGNELRVSIRRKGTVN 230
             RVPGND+P LSLLIQNK K  L V I+AP +VRLEK KVQL +NE  +++VSI++ G+ +
Sbjct:   137 RVPGNDAPHLSLLIQNKGKRALIVTITAPVFVRLEKDKVQLLQNEDIKVKVSIKKGGSND 196

Query:   231 -LITIKAGNGNCRLDFKDLMA--HNSGEDFDNSLKSTYFKFLSKKPTVPVITFAALLILA 287
               I + +  G CRL+ KDL A  H +  D   S+       +S + T+ VI   + L+L+
Sbjct:   197 SAIVLASSKGRCRLELKDLAAAAHETESDDTVSVSRPSILNISSR-TLIVIIMISFLVLS 255

Query:   288 SGCLCVSLRC-RQLSSGKSKYQRLDMEVPVAS-----LGNSESXXXXXXXX-----XXXX 336
                + V +   +  S G +KYQRLDME+PV++       + ES                 
Sbjct:   256 LVIIPVIIHVYKNKSRGNNKYQRLDMELPVSNPALVTKSDQESGDDGWNNNWGDDWDDEN 315

Query:   337 XXXXEEAXXXXXXXXXXXXXXXGLASRRLSKEGWKD 372
                 EE                GLA RRLSKEGWKD
Sbjct:   316 GGGDEEQPNTPVLPLTPSLSSRGLAPRRLSKEGWKD 351


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.128   0.357    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      372       330   0.00089  116 3  11 23  0.37    35
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  200 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.18u 0.10s 34.28t   Elapsed:  00:00:01
  Total cpu time:  34.18u 0.10s 34.28t   Elapsed:  00:00:01
  Start:  Sat May 11 09:40:49 2013   End:  Sat May 11 09:40:50 2013

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