Query 017397
Match_columns 372
No_of_seqs 212 out of 1330
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 08:13:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017397.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017397hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0890 Protein kinase of the 100.0 3.2E-71 6.8E-76 601.6 23.2 294 1-372 2089-2382(2382)
2 KOG0892 Protein kinase ATM/Tel 100.0 5.8E-70 1.3E-74 594.2 18.4 308 2-372 2491-2806(2806)
3 cd05169 PIKKc_TOR TOR (Target 100.0 2E-64 4.3E-69 477.2 21.6 232 1-232 47-279 (280)
4 cd05170 PIKKc_SMG1 Suppressor 100.0 6.7E-63 1.5E-67 470.7 22.8 231 1-232 47-306 (307)
5 cd05163 TRRAP TRansformation/t 100.0 4.2E-62 9.1E-67 452.8 18.8 202 1-232 50-252 (253)
6 COG5032 TEL1 Phosphatidylinosi 100.0 6.2E-62 1.3E-66 552.6 22.1 292 1-372 1814-2105(2105)
7 cd05171 PIKKc_ATM Ataxia telan 100.0 1.6E-61 3.6E-66 455.9 20.0 230 1-232 47-278 (279)
8 cd05172 PIKKc_DNA-PK DNA-depen 100.0 1.6E-59 3.4E-64 431.1 18.6 188 1-232 47-234 (235)
9 cd00892 PIKKc_ATR ATR (Ataxia 100.0 3.4E-57 7.4E-62 416.4 18.6 190 1-232 47-236 (237)
10 KOG0891 DNA-dependent protein 100.0 2.9E-57 6.4E-62 504.9 15.3 337 1-372 2005-2341(2341)
11 smart00146 PI3Kc Phosphoinosit 100.0 6.9E-54 1.5E-58 386.7 19.3 183 1-233 17-199 (202)
12 cd05164 PIKKc Phosphoinositide 100.0 2.3E-53 4.9E-58 387.6 18.9 176 1-226 47-222 (222)
13 cd05168 PI4Kc_III_beta Phospho 100.0 1.8E-50 4E-55 379.7 20.4 183 1-228 50-235 (293)
14 cd00142 PI3Kc_like Phosphoinos 100.0 1.3E-49 2.7E-54 363.2 18.0 173 1-226 47-219 (219)
15 PF00454 PI3_PI4_kinase: Phosp 100.0 2.7E-50 5.9E-55 372.1 10.4 212 1-232 19-234 (235)
16 cd00893 PI4Kc_III Phosphoinosi 100.0 7.3E-49 1.6E-53 368.2 18.0 187 1-232 50-238 (289)
17 cd00896 PI3Kc_III Phosphoinosi 100.0 1.5E-47 3.3E-52 368.6 19.3 179 1-232 113-297 (350)
18 cd00891 PI3Kc Phosphoinositide 100.0 1.2E-47 2.7E-52 369.9 18.2 193 1-232 108-303 (352)
19 cd05166 PI3Kc_II Phosphoinosit 100.0 4.2E-47 9E-52 365.6 17.6 192 1-232 108-304 (353)
20 cd05165 PI3Kc_I Phosphoinositi 100.0 9.3E-47 2E-51 363.0 18.5 192 1-232 116-316 (366)
21 cd05167 PI4Kc_III_alpha Phosph 100.0 1.3E-45 2.8E-50 348.8 20.5 185 1-230 71-258 (311)
22 cd05177 PI3Kc_C2_gamma Phospho 100.0 6E-46 1.3E-50 356.0 17.7 192 1-232 109-305 (354)
23 cd00894 PI3Kc_IB_gamma Phospho 100.0 3.5E-45 7.5E-50 351.1 18.0 191 1-230 117-313 (365)
24 cd05173 PI3Kc_IA_beta Phosphoi 100.0 1.1E-44 2.4E-49 348.2 18.2 193 1-232 112-311 (362)
25 cd05174 PI3Kc_IA_delta Phospho 100.0 3.8E-44 8.3E-49 343.5 18.1 191 1-230 112-309 (361)
26 cd05176 PI3Kc_C2_alpha Phospho 100.0 3.7E-43 8E-48 335.3 17.9 191 1-231 108-303 (353)
27 cd05175 PI3Kc_IA_alpha Phospho 100.0 1.5E-41 3.3E-46 324.7 17.3 190 1-230 116-314 (366)
28 cd00895 PI3Kc_C2_beta Phosphoi 100.0 1E-40 2.2E-45 318.6 17.7 189 1-229 109-302 (354)
29 KOG0889 Histone acetyltransfer 100.0 7.7E-32 1.7E-36 301.6 19.2 234 1-234 3243-3483(3550)
30 KOG0904 Phosphatidylinositol 3 100.0 1.1E-31 2.5E-36 271.4 9.2 191 1-230 826-1025(1076)
31 KOG0903 Phosphatidylinositol 4 100.0 4.3E-30 9.4E-35 257.4 15.3 175 2-225 606-786 (847)
32 KOG0905 Phosphoinositide 3-kin 100.0 8.1E-29 1.8E-33 256.0 12.3 191 1-231 1102-1297(1639)
33 KOG0906 Phosphatidylinositol 3 100.0 6.1E-29 1.3E-33 245.1 10.9 180 1-229 605-786 (843)
34 KOG0902 Phosphatidylinositol 4 100.0 3.7E-28 8E-33 255.4 14.8 185 1-234 1563-1753(1803)
35 PTZ00303 phosphatidylinositol 99.9 1.4E-22 3E-27 202.9 11.0 132 1-190 1068-1199(1374)
36 PF02260 FATC: FATC domain; I 99.7 1.1E-18 2.4E-23 109.3 1.2 32 341-372 2-33 (33)
37 KOG0616 cAMP-dependent protein 89.1 0.27 6E-06 46.6 2.4 43 120-163 139-191 (355)
38 cd05147 RIO1_euk RIO kinase fa 85.9 0.51 1.1E-05 41.9 2.2 34 129-164 127-165 (190)
39 KOG0612 Rho-associated, coiled 85.8 4.2 9.2E-05 45.2 9.3 112 111-228 172-324 (1317)
40 cd05145 RIO1_like RIO kinase f 85.8 0.59 1.3E-05 41.3 2.5 24 139-164 142-165 (190)
41 TIGR03843 conserved hypothetic 84.7 0.67 1.5E-05 42.6 2.4 45 122-167 131-175 (253)
42 KOG3365 NADH:ubiquinone oxidor 84.5 0.66 1.4E-05 38.5 2.0 26 346-371 104-129 (145)
43 TIGR03724 arch_bud32 Kae1-asso 84.0 1.9 4.1E-05 37.8 5.0 40 122-163 95-136 (199)
44 cd05151 ChoK Choline Kinase (C 82.7 1.2 2.5E-05 37.9 3.0 25 137-163 110-134 (170)
45 PRK14879 serine/threonine prot 81.1 3.5 7.6E-05 36.5 5.6 23 139-163 119-141 (211)
46 KOG0608 Warts/lats-like serine 81.0 1.5 3.3E-05 45.8 3.5 35 129-164 739-777 (1034)
47 COG0661 AarF Predicted unusual 80.2 1.2 2.6E-05 46.0 2.5 25 138-163 288-312 (517)
48 PRK10359 lipopolysaccharide co 78.5 1.5 3.2E-05 40.5 2.3 23 139-163 159-181 (232)
49 PRK04750 ubiB putative ubiquin 78.3 1.4 2.9E-05 45.8 2.2 24 139-163 284-311 (537)
50 TIGR01982 UbiB 2-polyprenylphe 78.1 3.4 7.4E-05 41.8 5.0 24 139-163 281-304 (437)
51 cd05119 RIO RIO kinase family, 76.3 2.1 4.6E-05 37.0 2.6 25 138-164 138-162 (187)
52 KOG1006 Mitogen-activated prot 76.2 2.3 5E-05 40.0 2.8 47 139-186 192-244 (361)
53 cd05144 RIO2_C RIO kinase fami 75.8 2.2 4.7E-05 37.7 2.6 28 138-166 148-175 (198)
54 PF01636 APH: Phosphotransfera 73.7 2.2 4.8E-05 37.9 2.1 32 132-163 164-195 (239)
55 KOG0598 Ribosomal protein S6 k 72.5 2.1 4.6E-05 41.6 1.7 25 139-164 149-173 (357)
56 KOG0592 3-phosphoinositide-dep 70.5 4.7 0.0001 41.4 3.6 34 129-163 184-221 (604)
57 PRK01723 3-deoxy-D-manno-octul 70.4 3.4 7.4E-05 38.1 2.6 25 138-163 165-189 (239)
58 smart00090 RIO RIO-like kinase 69.8 3.6 7.7E-05 37.9 2.6 40 122-165 153-197 (237)
59 PRK12274 serine/threonine prot 69.1 3.9 8.4E-05 37.3 2.6 28 136-164 110-140 (218)
60 cd05156 ChoK_euk Choline Kinas 68.4 3.9 8.4E-05 38.7 2.6 32 132-163 177-211 (302)
61 PF06176 WaaY: Lipopolysacchar 66.1 5.7 0.00012 36.4 3.0 24 137-162 157-180 (229)
62 cd05120 APH_ChoK_like Aminogly 65.4 6.1 0.00013 31.9 2.9 25 139-164 113-137 (155)
63 COG3642 Mn2+-dependent serine/ 64.2 6.2 0.00013 35.3 2.8 24 139-164 116-139 (204)
64 cd05154 ACAD10_11_like Acyl-Co 62.7 6.4 0.00014 34.7 2.7 31 133-163 173-204 (223)
65 cd05157 ETNK_euk Ethanolamine 62.3 7.1 0.00015 35.2 3.0 31 133-163 169-199 (235)
66 TIGR02172 Fb_sc_TIGR02172 Fibr 61.8 5.9 0.00013 36.1 2.4 25 137-163 156-180 (226)
67 PRK10271 thiK thiamine kinase; 58.3 9.2 0.0002 34.0 2.8 47 114-163 58-104 (188)
68 PF01163 RIO1: RIO1 family; I 58.1 7.4 0.00016 34.6 2.2 45 139-191 131-175 (188)
69 cd05153 HomoserineK_II Homoser 57.8 8.2 0.00018 36.2 2.6 29 134-163 175-203 (296)
70 KOG0603 Ribosomal protein S6 k 57.7 7 0.00015 40.7 2.2 30 136-165 436-465 (612)
71 PF01633 Choline_kinase: Choli 57.3 5.4 0.00012 35.6 1.3 30 134-163 143-172 (211)
72 cd05627 STKc_NDR2 Catalytic do 56.0 8.4 0.00018 37.3 2.5 25 139-164 125-149 (360)
73 KOG0984 Mitogen-activated prot 55.8 8.2 0.00018 35.2 2.1 24 139-163 173-196 (282)
74 PRK09605 bifunctional UGMP fam 55.4 22 0.00049 36.7 5.6 47 113-163 424-474 (535)
75 KOG0594 Protein kinase PCTAIRE 54.9 9.1 0.0002 37.0 2.4 47 120-167 123-171 (323)
76 PTZ00426 cAMP-dependent protei 53.2 17 0.00038 34.9 4.2 25 139-164 155-179 (340)
77 cd05155 APH_ChoK_like_1 Unchar 53.1 13 0.00028 33.8 3.1 29 133-163 163-192 (235)
78 TIGR00938 thrB_alt homoserine 52.1 13 0.00027 35.4 2.9 29 134-163 187-215 (307)
79 PRK05231 homoserine kinase; Pr 52.0 13 0.00027 35.5 2.9 26 136-163 189-215 (319)
80 PLN02421 phosphotransferase, a 50.9 12 0.00026 36.2 2.6 32 133-164 181-212 (330)
81 KOG0983 Mitogen-activated prot 50.6 19 0.00041 34.2 3.6 59 125-184 197-266 (391)
82 cd05628 STKc_NDR1 Catalytic do 50.3 12 0.00025 36.4 2.4 24 139-163 125-148 (363)
83 PF00069 Pkinase: Protein kina 49.3 8.9 0.00019 34.5 1.4 27 137-164 120-146 (260)
84 PLN02236 choline kinase 49.1 14 0.00031 36.0 2.8 32 133-164 199-230 (344)
85 cd05587 STKc_cPKC Catalytic do 48.4 9.5 0.00021 36.3 1.4 25 139-164 125-149 (324)
86 cd05617 STKc_aPKC_zeta Catalyt 48.1 27 0.00058 33.3 4.5 25 139-164 120-144 (327)
87 KOG1235 Predicted unusual prot 47.1 15 0.00033 38.1 2.7 25 139-163 325-352 (538)
88 cd05588 STKc_aPKC Catalytic do 46.7 23 0.00051 33.7 3.9 25 139-164 120-144 (329)
89 TIGR02906 spore_CotS spore coa 46.7 16 0.00034 34.5 2.6 29 133-163 186-214 (313)
90 cd05594 STKc_PKB_alpha Catalyt 46.5 14 0.00031 35.1 2.3 25 139-164 120-144 (325)
91 KOG2345 Serine/threonine prote 46.4 15 0.00033 34.3 2.4 27 137-164 151-177 (302)
92 PF01386 Ribosomal_L25p: Ribos 46.3 16 0.00035 28.1 2.1 16 145-160 73-88 (88)
93 PRK09188 serine/threonine prot 46.1 16 0.00034 36.1 2.5 34 130-164 122-160 (365)
94 cd05626 STKc_LATS2 Catalytic d 45.8 27 0.00059 34.1 4.3 24 139-163 125-148 (381)
95 cd05096 PTKc_DDR1 Catalytic do 45.5 33 0.00071 32.0 4.6 25 139-164 162-186 (304)
96 cd05607 STKc_GRK7 Catalytic do 45.4 47 0.001 30.5 5.7 26 139-165 119-144 (277)
97 cd05122 PKc_STE Catalytic doma 45.2 39 0.00084 29.8 4.9 30 136-166 119-148 (253)
98 KOG0198 MEKK and related serin 44.7 21 0.00045 34.5 3.1 47 139-185 141-187 (313)
99 cd05590 STKc_nPKC_eta Catalyti 44.6 12 0.00025 35.7 1.4 25 139-164 120-144 (320)
100 cd05146 RIO3_euk RIO kinase fa 44.3 15 0.00033 32.9 2.0 26 139-166 149-174 (197)
101 PF07804 HipA_C: HipA-like C-t 44.3 34 0.00074 25.4 3.7 33 122-154 39-71 (79)
102 PF13575 DUF4135: Domain of un 43.4 37 0.0008 33.4 4.8 46 119-166 133-178 (370)
103 cd05585 STKc_YPK1_like Catalyt 43.3 13 0.00029 35.0 1.6 25 139-164 117-141 (312)
104 PF06293 Kdo: Lipopolysacchari 43.2 20 0.00043 32.0 2.6 42 121-163 122-168 (206)
105 PHA03212 serine/threonine kina 43.2 41 0.00089 33.1 5.1 24 139-163 206-229 (391)
106 COG2334 Putative homoserine ki 42.7 18 0.00039 35.1 2.4 26 139-164 202-227 (331)
107 KOG0610 Putative serine/threon 42.5 30 0.00064 34.6 3.8 37 129-166 189-229 (459)
108 KOG3087 Serine/threonine prote 42.2 19 0.00042 32.3 2.2 28 139-166 137-166 (229)
109 cd06625 STKc_MEKK3_like Cataly 42.1 42 0.0009 30.2 4.7 25 138-163 127-151 (263)
110 cd00180 PKc Catalytic domain o 42.0 81 0.0018 26.4 6.3 29 136-164 113-141 (215)
111 cd05598 STKc_LATS Catalytic do 41.9 14 0.0003 35.9 1.5 24 139-163 125-148 (376)
112 PHA02882 putative serine/threo 41.9 16 0.00035 34.1 1.9 24 139-163 150-173 (294)
113 cd05150 APH Aminoglycoside 3'- 41.6 24 0.00051 32.0 2.9 29 134-163 163-191 (244)
114 PHA03207 serine/threonine kina 41.5 34 0.00074 33.6 4.2 25 139-164 209-233 (392)
115 cd05571 STKc_PKB Catalytic dom 41.5 14 0.00031 35.0 1.5 25 139-164 119-143 (323)
116 cd05616 STKc_cPKC_beta Catalyt 41.3 13 0.00028 35.3 1.2 25 139-164 125-149 (323)
117 cd05152 MPH2' Macrolide 2'-Pho 41.2 20 0.00044 33.7 2.5 28 135-163 186-214 (276)
118 cd05614 STKc_MSK2_N N-terminal 41.1 14 0.00031 35.1 1.4 25 139-164 129-153 (332)
119 cd05586 STKc_Sck1_like Catalyt 41.1 18 0.00039 34.3 2.1 24 139-163 120-143 (330)
120 cd05601 STKc_CRIK Catalytic do 40.9 14 0.00031 35.0 1.4 26 138-164 125-150 (330)
121 cd05603 STKc_SGK2 Catalytic do 40.8 13 0.00029 35.2 1.1 25 139-164 120-144 (321)
122 PRK15123 lipopolysaccharide co 40.7 23 0.00049 33.3 2.7 43 121-163 142-192 (268)
123 cd07862 STKc_CDK6 Catalytic do 40.7 13 0.00028 34.3 1.0 25 139-164 134-158 (290)
124 cd05591 STKc_nPKC_epsilon Cata 40.6 15 0.00032 34.8 1.4 25 139-164 120-144 (321)
125 cd07871 STKc_PCTAIRE3 Catalyti 40.5 13 0.00028 34.6 1.0 25 139-164 127-151 (288)
126 cd06657 STKc_PAK4 Catalytic do 40.5 37 0.0008 31.6 4.1 26 138-164 139-164 (292)
127 PRK11768 serine/threonine prot 40.1 15 0.00034 35.3 1.5 29 132-163 194-222 (325)
128 cd05609 STKc_MAST Catalytic do 40.0 17 0.00037 34.0 1.8 25 138-163 124-148 (305)
129 cd05039 PTKc_Csk_like Catalyti 39.5 55 0.0012 29.3 5.0 27 139-166 126-152 (256)
130 cd05592 STKc_nPKC_theta_delta 39.2 15 0.00032 34.9 1.2 25 139-164 120-144 (316)
131 cd05054 PTKc_VEGFR Catalytic d 39.2 61 0.0013 31.0 5.5 25 139-164 197-221 (337)
132 cd06644 STKc_STK10_LOK Catalyt 39.1 47 0.001 30.6 4.6 27 138-165 133-159 (292)
133 cd05116 PTKc_Syk Catalytic dom 39.1 45 0.00097 30.1 4.4 25 139-164 119-143 (257)
134 cd05597 STKc_DMPK_like Catalyt 39.0 41 0.0009 32.0 4.3 25 139-164 126-150 (331)
135 cd05612 STKc_PRKX_like Catalyt 38.9 17 0.00037 33.8 1.5 26 139-165 125-150 (291)
136 cd05575 STKc_SGK Catalytic dom 38.8 16 0.00035 34.7 1.4 25 139-164 120-144 (323)
137 cd05600 STKc_Sid2p_Dbf2p Catal 38.7 17 0.00036 34.7 1.5 25 139-164 125-149 (333)
138 TIGR02721 ycfN_thiK thiamine k 38.6 24 0.00051 32.4 2.4 28 134-163 146-173 (256)
139 cd05042 PTKc_Aatyk Catalytic d 38.6 17 0.00037 33.1 1.5 26 139-165 124-149 (269)
140 KOG0605 NDR and related serine 38.6 17 0.00036 37.3 1.5 23 140-163 266-288 (550)
141 cd05604 STKc_SGK3 Catalytic do 38.6 16 0.00035 34.6 1.4 25 139-164 120-144 (325)
142 cd05581 STKc_PDK1 Catalytic do 37.9 15 0.00033 33.4 1.0 28 138-166 125-152 (280)
143 cd05602 STKc_SGK1 Catalytic do 37.6 16 0.00034 34.7 1.1 24 139-163 120-143 (325)
144 PRK05943 50S ribosomal protein 37.3 19 0.00041 28.1 1.3 16 146-161 77-92 (94)
145 cd05573 STKc_ROCK_NDR_like Cat 37.2 17 0.00037 34.7 1.3 25 139-164 125-149 (350)
146 cd05088 PTKc_Tie2 Catalytic do 37.0 62 0.0013 30.2 5.1 25 139-164 148-172 (303)
147 cd05621 STKc_ROCK2 Catalytic d 36.9 19 0.00041 35.2 1.6 26 139-165 166-191 (370)
148 cd05059 PTKc_Tec_like Catalyti 36.9 51 0.0011 29.7 4.4 25 139-164 124-148 (256)
149 cd05595 STKc_PKB_beta Catalyti 36.7 16 0.00035 34.7 1.0 25 139-164 119-143 (323)
150 cd06640 STKc_MST4 Catalytic do 36.5 21 0.00046 32.7 1.8 26 138-164 124-149 (277)
151 cd05629 STKc_NDR_like_fungal C 36.3 27 0.00059 33.9 2.6 24 139-163 125-148 (377)
152 smart00587 CHK ZnF_C4 abd HLH 36.3 29 0.00063 30.7 2.6 30 135-164 121-154 (196)
153 PTZ00263 protein kinase A cata 36.2 19 0.00041 34.3 1.4 27 137-164 140-166 (329)
154 cd05593 STKc_PKB_gamma Catalyt 36.1 18 0.0004 34.4 1.3 25 139-164 119-143 (328)
155 cd05625 STKc_LATS1 Catalytic d 35.7 20 0.00043 34.9 1.5 24 139-163 125-148 (382)
156 cd05574 STKc_phototropin_like 35.5 23 0.0005 33.2 1.9 28 137-165 125-152 (316)
157 cd07872 STKc_PCTAIRE2 Catalyti 34.9 18 0.0004 33.8 1.1 25 139-164 128-152 (309)
158 cd05083 PTKc_Chk Catalytic dom 34.8 24 0.00052 31.8 1.8 27 138-165 123-149 (254)
159 PTZ00267 NIMA-related protein 34.8 23 0.0005 36.0 1.9 25 139-164 193-217 (478)
160 cd07837 STKc_CdkB_plant Cataly 34.8 27 0.00059 32.1 2.2 26 139-164 134-159 (295)
161 PLN00009 cyclin-dependent kina 34.7 32 0.0007 31.7 2.7 27 139-165 126-152 (294)
162 cd06656 STKc_PAK3 Catalytic do 34.7 54 0.0012 30.5 4.2 27 138-165 138-164 (297)
163 cd05620 STKc_nPKC_delta Cataly 34.7 18 0.00038 34.3 0.9 25 139-164 120-144 (316)
164 cd05596 STKc_ROCK Catalytic do 34.6 22 0.00047 34.7 1.6 26 139-165 166-191 (370)
165 cd05630 STKc_GRK6 Catalytic do 34.5 53 0.0011 30.3 4.2 26 139-165 126-151 (285)
166 cd05085 PTKc_Fer Catalytic dom 34.3 25 0.00053 31.5 1.8 25 139-164 117-141 (250)
167 cd00495 Ribosomal_L25_TL5_CTC 34.3 20 0.00043 27.7 1.0 15 146-160 75-89 (91)
168 cd07874 STKc_JNK3 Catalytic do 34.2 23 0.00049 34.1 1.6 26 139-165 143-168 (355)
169 KOG0593 Predicted protein kina 34.2 26 0.00056 33.8 1.9 42 122-164 106-149 (396)
170 PLN00034 mitogen-activated pro 33.9 19 0.00042 34.6 1.1 25 139-164 192-216 (353)
171 cd05033 PTKc_EphR Catalytic do 33.9 26 0.00057 31.8 1.9 28 138-166 129-156 (266)
172 cd05102 PTKc_VEGFR3 Catalytic 33.8 30 0.00064 32.9 2.3 25 139-164 198-222 (338)
173 PLN03225 Serine/threonine-prot 33.7 25 0.00054 36.8 1.9 25 139-163 279-303 (566)
174 cd05580 STKc_PKA Catalytic dom 33.7 23 0.0005 32.8 1.5 27 138-165 124-150 (290)
175 cd05615 STKc_cPKC_alpha Cataly 33.6 21 0.00046 33.9 1.3 25 139-164 125-149 (323)
176 cd05618 STKc_aPKC_iota Catalyt 33.6 23 0.00049 33.8 1.5 25 139-164 120-144 (329)
177 cd07859 STKc_TDY_MAPK_plant Ca 33.6 54 0.0012 30.9 4.1 25 139-164 127-151 (338)
178 cd07876 STKc_JNK2 Catalytic do 33.4 22 0.00048 34.3 1.4 25 139-164 147-171 (359)
179 cd05068 PTKc_Frk_like Catalyti 33.4 26 0.00056 31.7 1.8 25 139-164 127-151 (261)
180 cd05584 STKc_p70S6K Catalytic 33.2 23 0.00049 33.6 1.4 24 139-163 124-147 (323)
181 PF05191 ADK_lid: Adenylate ki 33.2 25 0.00053 22.3 1.1 16 147-162 2-17 (36)
182 cd05624 STKc_MRCK_beta Catalyt 33.1 24 0.00051 33.7 1.5 26 139-165 126-151 (331)
183 cd06631 STKc_YSK4 Catalytic do 33.1 64 0.0014 29.1 4.4 28 137-165 124-151 (265)
184 cd06613 STKc_MAP4K3_like Catal 33.0 26 0.00057 31.4 1.8 28 137-165 123-150 (262)
185 KOG0599 Phosphorylase kinase g 32.7 26 0.00056 33.3 1.6 24 139-163 147-170 (411)
186 cd05075 PTKc_Axl Catalytic dom 32.7 23 0.0005 32.2 1.3 25 139-164 136-160 (272)
187 KOG0658 Glycogen synthase kina 32.6 31 0.00068 33.7 2.2 25 139-163 149-173 (364)
188 cd08223 STKc_Nek4 Catalytic do 32.5 33 0.00071 30.8 2.3 26 138-164 125-150 (257)
189 cd05098 PTKc_FGFR1 Catalytic d 32.4 61 0.0013 30.2 4.2 25 139-164 164-188 (307)
190 KOG0583 Serine/threonine prote 32.3 95 0.0021 30.6 5.6 46 118-164 122-169 (370)
191 cd06624 STKc_ASK Catalytic dom 32.2 28 0.00061 31.6 1.8 26 139-164 132-157 (268)
192 cd07869 STKc_PFTAIRE1 Catalyti 32.2 21 0.00046 33.3 1.0 26 139-165 127-152 (303)
193 cd06649 PKc_MEK2 Catalytic dom 32.1 29 0.00063 33.0 2.0 25 139-164 128-152 (331)
194 cd07875 STKc_JNK1 Catalytic do 31.9 26 0.00056 33.8 1.6 26 139-165 150-175 (364)
195 PHA03209 serine/threonine kina 31.7 64 0.0014 31.1 4.3 25 139-164 181-205 (357)
196 cd07873 STKc_PCTAIRE1 Catalyti 31.7 22 0.00048 33.1 1.1 27 138-165 127-153 (301)
197 cd06638 STKc_myosinIIIA Cataly 31.7 71 0.0015 29.2 4.5 25 139-164 148-172 (286)
198 cd06642 STKc_STK25-YSK1 Cataly 31.7 32 0.0007 31.4 2.2 26 138-164 124-149 (277)
199 cd05034 PTKc_Src_like Catalyti 31.6 28 0.00061 31.3 1.7 27 137-164 125-151 (261)
200 cd05084 PTKc_Fes Catalytic dom 31.5 29 0.00063 31.1 1.8 26 138-164 117-142 (252)
201 cd05101 PTKc_FGFR2 Catalytic d 31.5 81 0.0018 29.3 4.9 25 139-164 161-185 (304)
202 cd05599 STKc_NDR_like Catalyti 31.4 24 0.00052 34.0 1.3 26 138-164 124-149 (364)
203 cd07835 STKc_CDK1_like Catalyt 31.3 27 0.00058 32.0 1.5 26 138-164 122-147 (283)
204 cd06622 PKc_MAPKK_PBS2_like Ca 31.2 70 0.0015 29.2 4.4 26 139-165 127-152 (286)
205 cd06648 STKc_PAK_II Catalytic 31.0 78 0.0017 29.2 4.7 25 139-164 139-163 (285)
206 cd07839 STKc_CDK5 Catalytic do 31.0 65 0.0014 29.4 4.1 25 139-164 123-147 (284)
207 cd06658 STKc_PAK5 Catalytic do 30.9 69 0.0015 29.7 4.3 25 139-164 142-166 (292)
208 cd05072 PTKc_Lyn Catalytic dom 30.8 27 0.00058 31.5 1.4 25 139-164 127-151 (261)
209 cd05118 STKc_CMGC Catalytic do 30.8 25 0.00055 32.0 1.3 28 137-165 120-147 (283)
210 cd05069 PTKc_Yes Catalytic dom 30.8 32 0.00069 31.1 1.9 25 139-164 126-150 (260)
211 PHA03211 serine/threonine kina 30.8 62 0.0013 32.9 4.2 24 139-163 284-307 (461)
212 TIGR01767 MTRK 5-methylthiorib 30.7 31 0.00068 34.0 1.9 29 135-165 193-221 (370)
213 cd08219 STKc_Nek3 Catalytic do 30.7 34 0.00073 30.7 2.1 26 138-164 123-148 (255)
214 cd07841 STKc_CDK7 Catalytic do 30.6 81 0.0017 29.0 4.7 28 138-166 125-152 (298)
215 cd05082 PTKc_Csk Catalytic dom 30.5 31 0.00068 31.0 1.8 27 138-165 125-151 (256)
216 cd05622 STKc_ROCK1 Catalytic d 30.4 29 0.00063 33.8 1.7 25 139-164 166-190 (371)
217 cd05040 PTKc_Ack_like Catalyti 30.4 36 0.00078 30.5 2.2 26 138-164 120-145 (257)
218 cd08217 STKc_Nek2 Catalytic do 30.1 29 0.00063 31.1 1.5 27 138-165 133-159 (265)
219 cd06655 STKc_PAK2 Catalytic do 30.1 98 0.0021 28.7 5.2 29 136-165 136-164 (296)
220 smart00219 TyrKc Tyrosine kina 30.0 35 0.00077 30.4 2.1 28 138-166 126-153 (258)
221 cd06608 STKc_myosinIII_like Ca 29.9 28 0.00061 31.4 1.4 26 138-164 136-161 (275)
222 cd05619 STKc_nPKC_theta Cataly 29.9 26 0.00056 33.2 1.2 25 139-164 120-144 (316)
223 cd07877 STKc_p38alpha_MAPK14 C 29.8 2.4E+02 0.0052 26.8 8.0 26 139-165 144-169 (345)
224 cd08530 STKc_CNK2-like Catalyt 29.6 78 0.0017 28.1 4.3 29 137-166 125-153 (256)
225 cd05066 PTKc_EphR_A Catalytic 29.5 28 0.00061 31.6 1.4 27 138-165 129-155 (267)
226 PTZ00036 glycogen synthase kin 29.5 30 0.00065 34.8 1.6 26 139-164 194-219 (440)
227 cd06614 STKc_PAK Catalytic dom 29.4 84 0.0018 28.8 4.6 25 139-164 140-164 (286)
228 cd06637 STKc_TNIK Catalytic do 29.3 26 0.00056 31.8 1.1 25 139-164 135-159 (272)
229 cd08529 STKc_FA2-like Catalyti 29.2 41 0.00089 30.0 2.4 26 138-164 124-149 (256)
230 cd07863 STKc_CDK4 Catalytic do 29.0 27 0.00058 32.1 1.1 25 139-164 132-156 (288)
231 cd07861 STKc_CDK1_euk Catalyti 29.0 26 0.00056 32.1 1.0 25 139-164 125-149 (285)
232 cd05041 PTKc_Fes_like Catalyti 29.0 36 0.00078 30.4 1.9 28 137-165 115-142 (251)
233 cd07853 STKc_NLK Catalytic dom 29.0 29 0.00063 33.6 1.4 26 138-164 126-151 (372)
234 cd05631 STKc_GRK4 Catalytic do 28.9 31 0.00068 31.8 1.6 25 139-164 126-150 (285)
235 cd07838 STKc_CDK4_6_like Catal 28.8 1E+02 0.0022 28.0 4.9 27 138-165 130-156 (287)
236 cd06650 PKc_MEK1 Catalytic dom 28.7 37 0.00081 32.4 2.1 25 139-164 128-152 (333)
237 cd05582 STKc_RSK_N N-terminal 28.7 30 0.00066 32.6 1.5 27 138-165 121-147 (318)
238 KOG0690 Serine/threonine prote 28.6 27 0.00058 34.0 1.0 49 115-165 265-317 (516)
239 cd07878 STKc_p38beta_MAPK11 Ca 28.5 32 0.0007 32.7 1.6 26 139-165 142-167 (343)
240 cd05570 STKc_PKC Catalytic dom 28.4 27 0.00059 33.0 1.1 25 139-164 120-144 (318)
241 cd07857 STKc_MPK1 Catalytic do 28.2 75 0.0016 30.1 4.1 25 139-164 129-153 (332)
242 cd08224 STKc_Nek6_Nek7 Catalyt 28.2 35 0.00075 30.8 1.7 26 138-164 129-154 (267)
243 cd05589 STKc_PKN Catalytic dom 28.1 27 0.00059 33.1 1.0 25 139-164 125-149 (324)
244 cd05089 PTKc_Tie1 Catalytic do 28.0 84 0.0018 29.1 4.3 26 139-165 143-168 (297)
245 cd07832 STKc_CCRK Catalytic do 27.9 33 0.00071 31.3 1.5 27 138-165 122-148 (286)
246 cd05112 PTKc_Itk Catalytic dom 27.9 37 0.00079 30.5 1.8 26 138-164 123-148 (256)
247 COG0510 ycfN Thiamine kinase a 27.7 47 0.001 31.2 2.5 30 134-164 153-182 (269)
248 cd08228 STKc_Nek6 Catalytic do 27.6 32 0.0007 31.1 1.4 25 139-164 130-154 (267)
249 cd05583 STKc_MSK_N N-terminal 27.6 34 0.00073 31.5 1.5 26 138-164 128-153 (288)
250 cd06643 STKc_SLK Catalytic dom 27.5 42 0.0009 30.8 2.1 25 139-164 127-151 (282)
251 cd05095 PTKc_DDR2 Catalytic do 27.5 1E+02 0.0022 28.4 4.9 25 139-164 154-178 (296)
252 PHA03390 pk1 serine/threonine- 27.4 1.1E+02 0.0024 27.9 4.9 26 139-164 133-158 (267)
253 cd05097 PTKc_DDR_like Catalyti 27.4 35 0.00076 31.6 1.6 25 138-163 152-176 (295)
254 PHA00451 protein kinase 27.4 93 0.002 29.5 4.2 56 110-167 164-219 (362)
255 cd05632 STKc_GRK5 Catalytic do 27.3 89 0.0019 28.8 4.3 26 139-165 126-151 (285)
256 cd06619 PKc_MKK5 Catalytic dom 27.3 34 0.00074 31.4 1.5 26 138-164 118-143 (279)
257 KOG0694 Serine/threonine prote 27.2 33 0.00072 36.3 1.5 25 139-164 492-516 (694)
258 cd07847 STKc_CDKL1_4 Catalytic 27.2 37 0.0008 31.0 1.7 27 138-165 123-149 (286)
259 cd05123 STKc_AGC Catalytic dom 26.8 50 0.0011 29.3 2.5 29 136-165 114-142 (250)
260 cd05086 PTKc_Aatyk2 Catalytic 26.3 44 0.00096 30.4 2.1 25 139-164 123-147 (268)
261 PRK09550 mtnK methylthioribose 26.3 48 0.001 33.2 2.4 29 134-164 223-251 (401)
262 cd05608 STKc_GRK1 Catalytic do 26.3 37 0.0008 31.3 1.5 25 139-164 121-145 (280)
263 cd05623 STKc_MRCK_alpha Cataly 26.3 37 0.0008 32.3 1.5 25 139-164 126-150 (332)
264 cd05063 PTKc_EphR_A2 Catalytic 26.2 37 0.0008 30.8 1.5 27 137-164 129-155 (268)
265 PLN03224 probable serine/threo 26.2 1.1E+02 0.0024 31.6 5.1 26 139-165 333-358 (507)
266 cd05062 PTKc_IGF-1R Catalytic 26.1 38 0.00083 30.9 1.6 25 139-164 143-167 (277)
267 cd05047 PTKc_Tie Catalytic dom 25.8 1.1E+02 0.0023 27.8 4.5 25 139-164 136-160 (270)
268 cd05044 PTKc_c-ros Catalytic d 25.7 46 0.001 30.1 2.1 25 139-164 130-159 (269)
269 cd06654 STKc_PAK1 Catalytic do 25.7 90 0.002 28.9 4.1 27 138-165 139-165 (296)
270 cd05572 STKc_cGK_PKG Catalytic 25.6 62 0.0013 29.1 2.9 28 136-164 114-141 (262)
271 cd06605 PKc_MAPKK Catalytic do 25.6 37 0.00081 30.5 1.4 26 139-165 125-150 (265)
272 cd05099 PTKc_FGFR4 Catalytic d 25.4 1.2E+02 0.0026 28.3 4.9 26 139-165 158-183 (314)
273 cd05103 PTKc_VEGFR2 Catalytic 25.4 1.5E+02 0.0032 28.3 5.6 25 139-164 203-227 (343)
274 cd06629 STKc_MAPKKK_Bck1_like 25.3 48 0.001 30.1 2.1 25 139-164 132-156 (272)
275 cd07834 STKc_MAPK Catalytic do 25.3 35 0.00076 32.2 1.2 28 138-166 126-153 (330)
276 cd07870 STKc_PFTAIRE2 Catalyti 25.3 42 0.00092 30.9 1.7 27 137-164 125-151 (291)
277 cd05035 PTKc_Axl_like Catalyti 25.0 43 0.00094 30.2 1.7 25 139-164 137-161 (273)
278 cd06635 STKc_TAO1 Catalytic do 25.0 1.4E+02 0.003 28.0 5.3 26 139-165 149-174 (317)
279 PTZ00283 serine/threonine prot 25.0 44 0.00095 34.3 1.9 24 139-163 167-190 (496)
280 cd05579 STKc_MAST_like Catalyt 24.9 41 0.00089 30.0 1.5 27 138-165 116-142 (265)
281 cd05633 STKc_GRK3 Catalytic do 24.9 1.1E+02 0.0024 28.1 4.4 27 138-165 120-146 (279)
282 cd05115 PTKc_Zap-70 Catalytic 24.9 44 0.00096 30.2 1.8 25 139-164 119-143 (257)
283 cd07848 STKc_CDKL5 Catalytic d 24.9 40 0.00086 31.0 1.5 26 139-165 124-149 (287)
284 cd06659 STKc_PAK6 Catalytic do 24.7 43 0.00094 31.2 1.7 26 138-164 140-165 (297)
285 cd06606 STKc_MAPKKK Catalytic 24.6 35 0.00076 30.2 1.0 30 136-166 122-151 (260)
286 cd05109 PTKc_HER2 Catalytic do 24.6 44 0.00096 30.5 1.7 24 139-163 133-156 (279)
287 cd05111 PTK_HER3 Pseudokinase 24.6 48 0.0011 30.4 2.0 25 139-164 133-157 (279)
288 cd05070 PTKc_Fyn_Yrk Catalytic 24.5 52 0.0011 29.6 2.1 26 138-164 125-150 (260)
289 cd07867 STKc_CDC2L6 Catalytic 24.5 40 0.00088 31.4 1.4 26 139-164 132-160 (317)
290 cd06623 PKc_MAPKK_plant_like C 24.4 37 0.0008 30.4 1.2 27 138-165 123-149 (264)
291 cd06612 STKc_MST1_2 Catalytic 24.4 50 0.0011 29.4 2.0 28 137-165 121-148 (256)
292 cd05061 PTKc_InsR Catalytic do 24.3 47 0.001 30.6 1.8 24 139-163 143-166 (288)
293 cd08215 STKc_Nek Catalytic dom 24.3 42 0.0009 29.8 1.4 28 137-165 125-152 (258)
294 cd07879 STKc_p38delta_MAPK13 C 24.2 42 0.00091 32.1 1.5 26 139-165 141-166 (342)
295 cd05071 PTKc_Src Catalytic dom 24.1 51 0.0011 29.9 2.0 25 139-164 126-150 (262)
296 KOG0696 Serine/threonine prote 23.9 51 0.0011 33.2 2.0 26 139-165 474-499 (683)
297 cd05079 PTKc_Jak1_rpt2 Catalyt 23.8 45 0.00097 30.6 1.6 25 139-164 133-157 (284)
298 PRK06148 hypothetical protein; 23.6 58 0.0013 36.7 2.6 27 138-164 207-235 (1013)
299 cd00192 PTKc Catalytic domain 23.6 53 0.0011 29.2 2.0 29 137-166 127-155 (262)
300 cd05090 PTKc_Ror1 Catalytic do 23.6 48 0.001 30.3 1.8 26 139-165 148-173 (283)
301 cd07830 STKc_MAK_like Catalyti 23.6 57 0.0012 29.7 2.2 28 136-164 120-147 (283)
302 cd07850 STKc_JNK Catalytic dom 23.5 38 0.00083 32.5 1.1 27 138-165 141-167 (353)
303 cd05048 PTKc_Ror Catalytic Dom 23.5 49 0.0011 30.2 1.8 25 139-164 148-172 (283)
304 cd06607 STKc_TAO Catalytic dom 23.4 60 0.0013 30.3 2.4 26 138-164 138-163 (307)
305 cd06616 PKc_MKK4 Catalytic dom 23.4 46 0.001 30.5 1.6 25 139-164 132-156 (288)
306 cd07852 STKc_MAPK15 Catalytic 23.1 1.3E+02 0.0028 28.4 4.7 26 139-165 131-156 (337)
307 PF12095 DUF3571: Protein of u 23.0 40 0.00087 25.8 0.9 28 342-369 51-78 (83)
308 cd05052 PTKc_Abl Catalytic dom 23.0 54 0.0012 29.7 1.9 27 139-166 128-154 (263)
309 cd05104 PTKc_Kit Catalytic dom 23.0 1.5E+02 0.0033 28.7 5.3 25 139-164 238-262 (375)
310 cd05050 PTKc_Musk Catalytic do 22.9 42 0.0009 30.9 1.2 25 139-164 154-178 (288)
311 cd07840 STKc_CDK9_like Catalyt 22.8 40 0.00087 30.7 1.0 29 137-166 122-150 (287)
312 cd06632 STKc_MEKK1_plant Catal 22.5 1.3E+02 0.0029 26.6 4.5 26 139-165 126-151 (258)
313 cd05037 PTK_Jak_rpt1 Pseudokin 22.3 1.7E+02 0.0038 25.9 5.2 26 139-165 125-157 (259)
314 cd05577 STKc_GRK Catalytic dom 22.2 44 0.00096 30.6 1.2 27 138-165 118-144 (277)
315 KOG0665 Jun-N-terminal kinase 22.2 55 0.0012 31.8 1.8 42 136-187 137-180 (369)
316 cd08229 STKc_Nek7 Catalytic do 22.1 48 0.001 29.9 1.4 27 138-165 129-155 (267)
317 PRK10593 hypothetical protein; 22.1 62 0.0013 30.7 2.2 25 137-161 196-221 (297)
318 KOG0667 Dual-specificity tyros 22.1 1.4E+02 0.003 31.4 4.7 44 120-163 292-338 (586)
319 PHA03210 serine/threonine kina 22.0 49 0.0011 33.9 1.5 40 122-164 272-315 (501)
320 cd05092 PTKc_TrkA Catalytic do 21.8 47 0.001 30.5 1.3 25 138-163 145-169 (280)
321 cd05038 PTKc_Jak_rpt2 Catalyti 21.8 53 0.0011 29.8 1.7 26 138-164 132-157 (284)
322 cd06628 STKc_MAPKKK_Byr2_like 21.8 44 0.00095 30.2 1.1 26 138-164 129-154 (267)
323 cd05605 STKc_GRK4_like Catalyt 21.8 1.3E+02 0.0029 27.6 4.4 26 139-165 126-151 (285)
324 cd05113 PTKc_Btk_Bmx Catalytic 21.8 56 0.0012 29.5 1.8 25 138-163 123-147 (256)
325 cd05080 PTKc_Tyk2_rpt2 Catalyt 21.7 62 0.0013 29.6 2.1 25 139-164 131-155 (283)
326 cd05578 STKc_Yank1 Catalytic d 21.7 1.3E+02 0.0028 26.9 4.2 28 138-166 123-150 (258)
327 cd07836 STKc_Pho85 Catalytic d 21.6 50 0.0011 30.1 1.4 29 136-165 121-149 (284)
328 cd06641 STKc_MST3 Catalytic do 21.4 57 0.0012 29.8 1.8 26 137-163 123-148 (277)
329 cd07868 STKc_CDK8 Catalytic do 21.3 49 0.0011 30.9 1.4 26 139-164 132-160 (317)
330 cd05087 PTKc_Aatyk1_Aatyk3 Cat 21.3 58 0.0013 29.5 1.8 25 139-164 124-148 (269)
331 cd05067 PTKc_Lck_Blk Catalytic 21.3 50 0.0011 29.7 1.4 25 139-164 126-150 (260)
332 cd07860 STKc_CDK2_3 Catalytic 21.2 52 0.0011 30.1 1.5 25 139-164 124-148 (284)
333 cd05611 STKc_Rim15_like Cataly 21.2 51 0.0011 29.6 1.4 26 138-164 120-145 (260)
334 cd06646 STKc_MAP4K5 Catalytic 21.2 50 0.0011 29.9 1.3 26 138-164 129-154 (267)
335 cd06627 STKc_Cdc7_like Catalyt 21.0 57 0.0012 28.9 1.6 29 137-166 121-149 (254)
336 cd06639 STKc_myosinIIIB Cataly 21.0 55 0.0012 30.1 1.6 26 139-165 152-177 (291)
337 cd06917 STKc_NAK1_like Catalyt 20.9 51 0.0011 30.0 1.3 26 138-164 124-149 (277)
338 TIGR02904 spore_ysxE spore coa 20.9 58 0.0013 30.9 1.8 89 135-233 197-285 (309)
339 cd06636 STKc_MAP4K4_6 Catalyti 20.9 54 0.0012 30.0 1.5 27 138-165 144-170 (282)
340 cd06618 PKc_MKK7 Catalytic dom 20.8 49 0.0011 30.6 1.2 25 139-164 139-163 (296)
341 cd05576 STKc_RPK118_like Catal 20.6 52 0.0011 29.4 1.3 24 139-163 109-132 (237)
342 cd05613 STKc_MSK1_N N-terminal 20.6 54 0.0012 30.1 1.4 26 138-164 128-153 (290)
343 cd05114 PTKc_Tec_Rlk Catalytic 20.4 67 0.0014 28.8 2.0 27 137-164 122-148 (256)
344 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 20.4 57 0.0012 29.8 1.6 25 139-164 132-156 (284)
345 cd06630 STKc_MEKK1 Catalytic d 20.3 1.5E+02 0.0032 26.6 4.3 28 138-165 126-153 (268)
346 cd05110 PTKc_HER4 Catalytic do 20.3 62 0.0013 30.2 1.8 26 139-165 133-158 (303)
347 cd05093 PTKc_TrkB Catalytic do 20.3 66 0.0014 29.6 2.0 25 139-164 144-168 (288)
348 cd05610 STKc_MASTL Catalytic d 20.3 58 0.0013 34.8 1.7 25 139-164 128-152 (669)
349 cd05106 PTKc_CSF-1R Catalytic 20.2 77 0.0017 30.9 2.5 25 139-164 236-260 (374)
350 cd05094 PTKc_TrkC Catalytic do 20.1 65 0.0014 29.7 1.9 25 139-164 147-171 (291)
351 PF11007 CotJA: Spore coat ass 20.0 40 0.00087 21.5 0.3 11 361-371 3-13 (36)
No 1
>KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-71 Score=601.56 Aligned_cols=294 Identities=35% Similarity=0.600 Sum_probs=246.8
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
|++..+||.+|++|.++|+|.|.||||+|||++++|||||||+|+.+|++|..++...++..+....-... ......
T Consensus 2089 MeFn~lin~lL~KD~eSRrR~L~IRTYaViPLneeCGiIEWv~nt~slR~IL~klY~~rg~~~~~~~l~~~---~~~~~~ 2165 (2382)
T KOG0890|consen 2089 MEFNELINKLLRKDQESRRRKLYIRTYAVIPLNEECGIIEWVPNTASLREILDKLYMTRGKWMIKKQLRSV---HLKKQM 2165 (2382)
T ss_pred HHHHHHHHHHHhhCHHHhhhcceeeEEEEeecCCccceEEecCCcchHHHHHHHHHHhccccchhhHHHHh---cCcHhh
Confidence 78999999999999999999999999999999999999999999999999998866554433222211111 011112
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
....+.++|++..-...|+.+..++....++|.+||..|++|++|+|+||||||||||||||.+|||||..||+++|+||
T Consensus 2166 ~~~~~~~~F~~~~lpkfPPVFheWFl~~FPeP~sW~~SR~~Y~rTtAVMSmVGyIlGLGDRHgENILFDs~TGdcVHVDF 2245 (2382)
T KOG0890|consen 2166 AKEEKGKVFREKLLPKFPPVFHEWFLESFPEPGSWFASRNNYARTTAVMSMVGYILGLGDRHGENILFDSTTGDCVHVDF 2245 (2382)
T ss_pred cccchhhhhHHhhcccCCcHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHhcCccccccceeeecCCCcEEEEee
Confidence 34457888888666666667766666667999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccccccCCCc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVP 240 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~~~~~~~~ 240 (372)
.+.|++|. .+++||.||||||+||+++|||.|+||.|+.+|+.|++.||+|++.|+++|+.|+||||++|......
T Consensus 2246 nCLFnKGe-tlevPEiVPFRLT~NMidamGp~G~EG~Frk~cEiTLrLlR~n~e~LMSiL~tF~~DPlvew~~~~k~--- 2321 (2382)
T KOG0890|consen 2246 NCLFNKGE-TLEVPELVPFRLTQNMIDAMGPLGLEGSFRKVCEITLRLLRKNRETLMSILETFVYDPLVEWNRPSKG--- 2321 (2382)
T ss_pred cccccCCc-ccCCCCccceecchhHHhhcCCcccchhHHHHHHHHHHHHHhcchhHHHHHHHHHhCchhhccCcccC---
Confidence 99999995 68999999999999999999999999999999999999999999999999999999999999853210
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCccchhHHHHHHHHhhcCChhhhhhhhHHHHHHHHhhhhcCcCCCCCCCCCcc
Q 017397 241 QMSVFANTHVPPVVNAEETAPNRELPQPQRGARERELLQAVNQLGDASEVLNGRAVVVMARMSNKLTGRDFSSTPLPTSS 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~g~~~~~~~~~~~~ 320 (372)
+ .+.| +++ ...++.+|++|++|....
T Consensus 2322 --------~---------------s~~~----------------------i~e-~~~~i~~i~~rlqG~~~~-------- 2347 (2382)
T KOG0890|consen 2322 --------R---------------SPKK----------------------INE-DRLVIGRIRGRLQGAMKV-------- 2347 (2382)
T ss_pred --------C---------------CcCc----------------------ccc-hHHHHhHHHHHHhccCcC--------
Confidence 0 0000 000 134678899999996421
Q ss_pred hhhhccccccccCCCCCcCCCCCHHHHHHHHHHHhhCcchhhhhcccccCCC
Q 017397 321 IQQAVDHSTLISGDSREVDHGLSVKLQVQKLIIQATSHENLCQNYVGWCPFW 372 (372)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~lsv~~qV~~LI~~Atd~~nL~~m~~GW~Pw~ 372 (372)
.+.+||||+||+.||++|||++|||.||.||+|||
T Consensus 2348 -----------------~glPLSveGq~~~LI~eATseenL~~MYIGW~p~l 2382 (2382)
T KOG0890|consen 2348 -----------------DGLPLSVEGQASSLIEEATSEENLSEMYIGWMPFL 2382 (2382)
T ss_pred -----------------CCCccchhhHHHHHHHHhcCHHHHHHHHhhhhccC
Confidence 13689999999999999999999999999999998
No 2
>KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-70 Score=594.25 Aligned_cols=308 Identities=38% Similarity=0.639 Sum_probs=250.1
Q ss_pred cHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHH-HHhh------hhhhhHHHHHhhhcC
Q 017397 2 QLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREY-RDAR------KITLNQEHKYMLSFA 74 (372)
Q Consensus 2 Qlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~-~~~~------~~~~~~~~~~~~~~~ 74 (372)
|+|+++|++|.+++++++|+|.|+||+||||+++.|+||||.||++|++.+-.- .+++ .+..++-.+.|...
T Consensus 2491 QvF~~vN~lL~~~~et~krkL~irTYKVvPls~~sGvlEwv~~tiplgeyLv~~~~gah~ry~p~d~s~~~crk~m~~~- 2569 (2806)
T KOG0892|consen 2491 QVFGQVNTFLQNDRETRKRKLSIRTYKVIPLSPKAGVLEWVTNTIPLGEYLVVESGGAHKRYRPNDWSLSKCRKLMSEV- 2569 (2806)
T ss_pred HHHHHHHHHhhccHHHHhcccceeEEeeeecCcccceeecccCCeehhhhhcccCCccccccCCCCCChHHHHHHHHHH-
Confidence 899999999999999999999999999999999999999999999999977511 1111 12222222333222
Q ss_pred CCCCCcchHhHHHHHHHHHhccCCchHHHHHHhh-cCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCC
Q 017397 75 PDYDHLPLIAKVEVFEYALQNTEGNDLARVLWLK-SRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSG 153 (372)
Q Consensus 75 ~~~~~~~~~~k~~~f~~~~~~~~~~~l~~~~~~~-~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG 153 (372)
.+-+.+.|.++|.++|.+..| ..+++++. .++|..||++|.+||+|.|+.|||||||||||||..|||||..||
T Consensus 2570 ---q~k~~E~r~k~y~~vc~n~~P--vfryFflEkF~dP~~WFekrlaYTrsvA~sS~VGyILGLGDRH~qNILid~~ta 2644 (2806)
T KOG0892|consen 2570 ---QKKSLETRLKAYDKVCRNIRP--VFRYFFLEKFPDPADWFEKRLAYTRSVAASSMVGYILGLGDRHGQNILIDQQTA 2644 (2806)
T ss_pred ---hcccHHHHHHHHHHHHhhchH--HHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHhcccchhhhheeeccccc
Confidence 233567899999999998764 66666665 699999999999999999999999999999999999999999999
Q ss_pred eEEEEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccc
Q 017397 154 KILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 233 (372)
Q Consensus 154 ~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~ 233 (372)
+|||||||.+|++|+ .+|.||.|||||||+||++||.+||||+||+||+.||.+||++++.+++++++++||||.+|..
T Consensus 2645 EviHIDlGiAFEQGk-ilptPE~VPFRLTRDiVdgmGItGveGvFrRccE~t~~vlR~~~~~lltileVl~yDPLf~W~m 2723 (2806)
T KOG0892|consen 2645 EVIHIDLGIAFEQGK-ILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEFTLEVLRREKESLLTILEVLLYDPLFSWLM 2723 (2806)
T ss_pred ceEEEeeeeehhcCC-cCCCCCcccceeehhhccccCccCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcchHHHhh
Confidence 999999999999995 7899999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCccccccccCCCCCCCCccccCCCCCCCCCccchhHHHHHHHHhhcCChhhhhhhhHHHHHHHHhhhhcCcCCCC
Q 017397 234 FNFNEVPQMSVFANTHVPPVVNAEETAPNRELPQPQRGARERELLQAVNQLGDASEVLNGRAVVVMARMSNKLTGRDFSS 313 (372)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~g~~~~~ 313 (372)
++.++-++... . ++| ..+ . .+..+ +. ++. ++-|..++-|+.+||.|++.
T Consensus 2724 splK~~~~q~~----e------~~e-~~n--~----~~~~~-~~---------~~n--d~~a~r~l~r~q~kl~g~e~-- 2772 (2806)
T KOG0892|consen 2724 SPLKALKKQKE----E------DEE-NFN--L----SGNIT-ED---------ASN--DRNAVRALMRAQRKLDGVEQ-- 2772 (2806)
T ss_pred cHHHHHHHHHh----h------cch-hcc--c----ccchh-hh---------hcc--chHHHHHHHHHHHHhhhhhc--
Confidence 76543322110 0 000 000 0 00000 00 000 23355678899999999863
Q ss_pred CCCCCcchhhhccccccccCCCCCcCCCCCHHHHHHHHHHHhhCcchhhhhcccccCCC
Q 017397 314 TPLPTSSIQQAVDHSTLISGDSREVDHGLSVKLQVQKLIIQATSHENLCQNYVGWCPFW 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lsv~~qV~~LI~~Atd~~nL~~m~~GW~Pw~ 372 (372)
+..+|||+||+.||+|||||.|||+|||||.||.
T Consensus 2773 -------------------------g~~~sVe~qv~~LIqqA~dpsnLs~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2773 -------------------------GTMLSVEAQVQELIQQATDPSNLSLMFPGWSAFQ 2806 (2806)
T ss_pred -------------------------cccccHHHHHHHHHHHhcCchhhhhhcCCCcCcC
Confidence 3568999999999999999999999999999994
No 3
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=100.00 E-value=2e-64 Score=477.24 Aligned_cols=232 Identities=73% Similarity=1.243 Sum_probs=217.0
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhh-hcCCCCCC
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYML-SFAPDYDH 79 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 79 (372)
||||++||.+|+++++|++|+|.++||.|||+|+++||||||+++.||.+|+++|++..++..+.+...+. .....|+.
T Consensus 47 ~ql~~~~n~il~~~~~~~~~~l~~~ty~Vipls~~~GlIE~v~~~~sl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (280)
T cd05169 47 MQLFGLINTLLKNDSETSKRNLSIQTYSVIPLSPNVGLIGWVPGCDTLHSLIREYRKKRNIPLNLEHRLMELKSAPDYDN 126 (280)
T ss_pred HHHHHHHHHHHHhChhhhhcCcceeeccEEecCCCcceEEeCCCCchHHHHHHHHHHHcCCChhHHHHHHHHHhhhhhhh
Confidence 79999999999999999999999999999999999999999999999999999999888776665554432 23456777
Q ss_pred cchHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 80 LPLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 80 ~~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
+....|.++|++++++.+++++.+++|..+++++.|+.+|++|++|+|++|++|||||||||||+|||||+.||+++|||
T Consensus 127 ~~~~~k~~~~~~i~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~S~A~~Sv~~YilglgDRH~~NIll~~~tG~v~HID 206 (280)
T cd05169 127 LTLIQKLEVFEYALNNTPGDDLRKILWLKSPSSEAWLERRTNFTRSLAVMSMVGYILGLGDRHPSNIMIDRLTGKVIHID 206 (280)
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhheeccCCCcceEEEEcCCCCEEEEe
Confidence 77778999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 160 FGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 160 fg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
||++|++|+..+++||.|||||||||+++||+.|++|.|+.+|+.++++||++++.|+++|++|++|||++|.
T Consensus 207 fg~~f~~~~~~~~~pE~VPFRLT~~~~~~lG~~g~~G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~dpl~~W~ 279 (280)
T cd05169 207 FGDCFEVAMHREKFPEKVPFRLTRMLVNALGVSGIEGTFRTTCEDVMNVLRENKESLMAVLEAFVHDPLLSWR 279 (280)
T ss_pred cHHHHhhccccCCCCCcCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHhCcccccc
Confidence 9999999876678999999999999999999999999999999999999999999999999999999999996
No 4
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=100.00 E-value=6.7e-63 Score=470.66 Aligned_cols=231 Identities=37% Similarity=0.725 Sum_probs=206.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHH--------------
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQE-------------- 66 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~-------------- 66 (372)
||||++||.+|+++.+|++|+|.|+||.|||||+++||||||+|+.||.++++.|++..++.....
T Consensus 47 mQlf~l~N~ll~~~~~~~~r~L~i~tY~ViPLs~~~GLIEwv~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (307)
T cd05170 47 MQFLSIVNTMFASIKDQESPRFRARHYSVTPLGPRSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSQVGYQNPQIPGIV 126 (307)
T ss_pred HHHHHHHHHHHHhChhhhccCceeecceEEEcCCCcceEEEcCCChhHHHHHHHHHHhhhhhhhhhhccccccccccccc
Confidence 799999999999999999999999999999999999999999999999999999887654311000
Q ss_pred -------HHHhhh--------cCCCCCCcchHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHH
Q 017397 67 -------HKYMLS--------FAPDYDHLPLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSM 131 (372)
Q Consensus 67 -------~~~~~~--------~~~~~~~~~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si 131 (372)
...+.. ....+...+...+.++|++++++++++++.+++|..+++++.|+.+|++|++|+|++|+
T Consensus 127 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~w~~~r~~f~~s~A~~s~ 206 (307)
T cd05170 127 PRPSDLFYNKITPALKAHGLSLDVSRRDWPLSVLRQVLDELMQETPKDLLARELWCSSTTSSEWWSVTQRYARSTAVMSM 206 (307)
T ss_pred cchhHHHHHHHHHHHHhhccccccchhhccHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000000 01122334556688999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCceEEEecCCeEEEEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhc
Q 017397 132 VGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRS 211 (372)
Q Consensus 132 ~~yilglgDRH~~NIli~~~tG~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~ 211 (372)
+|||||||||||+||||++.||+++|||||++|+++. .+++||.|||||||||+++||+.|++|.|+.+|+.++++||+
T Consensus 207 ~~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~~~~-~l~~pE~VPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~ 285 (307)
T cd05170 207 IGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFEKGK-SLRIPEKVPFRMTQNIETALGLTGVEGVFRLSCEQVLHIMRR 285 (307)
T ss_pred HHHHccCCCCCCccEEEEcCCCcEEEEeeHhhhcccC-CCCCCCCCCeeeCHHHHHHhCCCCCchhHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999985 588999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHccCcccccc
Q 017397 212 NRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 212 ~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
+++.|+++|++|++||+++|.
T Consensus 286 ~~~~l~~~l~~fv~DPl~~W~ 306 (307)
T cd05170 286 GRETLLTLLEAFVYDPLVDWT 306 (307)
T ss_pred CHHHHHHHHHHHhhCcccccc
Confidence 999999999999999999996
No 5
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=100.00 E-value=4.2e-62 Score=452.80 Aligned_cols=202 Identities=24% Similarity=0.417 Sum_probs=193.1
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||||+++|.+|.++++|++|+|.+++|.||||++++|||||++++.|++++++.
T Consensus 50 ~Ql~~liN~~l~~~~et~~r~l~i~~y~viPLs~~~gLie~~~~~~tl~~i~~~-------------------------- 103 (253)
T cd05163 50 LQLFRTLNSVLSKNKETRRRNLQFTLPLVVPLSPQIRLVEDDPSYISLQEIYED-------------------------- 103 (253)
T ss_pred HHHHHHHHHHHhcCHHHHhCcccccceeEEEcCCccceEEECCCCccHHHHHHH--------------------------
Confidence 799999999999999999999999999999999999999999999999999753
Q ss_pred chHhHHHHHHHHHhc-cCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 81 PLIAKVEVFEYALQN-TEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~-~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
|+++|++++++ .+++++.+++|..+++++.|+.+|++|++|+|++|++|||||||||||+||||+..||+|+|||
T Consensus 104 ----~~~~~~~i~~~~~p~~~l~~~~~~~~~~~~~~~~~r~~ft~s~A~~s~~gYilglgdRh~~nili~~~tG~v~hiD 179 (253)
T cd05163 104 ----KLEIYNEIQKDMVPDTILKNYILSTFPTYQDYWLFRKQFTYQLALLSFMTYILSINNRNPDKIFISRDTGNVYQSD 179 (253)
T ss_pred ----HHHHHHHHHHhcCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhEEEEcCCCcEEEEe
Confidence 57889999887 5666788888999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 160 FGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 160 fg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
||++|+++...+++||.|||||||||+++||+.|++|.|+.+|++++++||++++.|+++|++|++|||++|.
T Consensus 180 f~~~f~~~~~~~~~pE~VPFRLT~ni~~~~g~~g~eG~f~~~~~~~~~~Lr~~~~~l~~~L~~fi~Dpl~~W~ 252 (253)
T cd05163 180 LLPSINNNKPLFHNNEPVPFRLTPNIQHLIGPIGLEGILTSSMMAIARCLTEPEFDLENALQLFIRDELIAWH 252 (253)
T ss_pred eeeeecCCCcCCCCCCcCCcccCHHHHHHhCCcCcCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHcChhhhhc
Confidence 9999999876668999999999999999999999999999999999999999999999999999999999997
No 6
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]
Probab=100.00 E-value=6.2e-62 Score=552.65 Aligned_cols=292 Identities=46% Similarity=0.781 Sum_probs=260.8
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
|||+++||.+|+++++|++|+++|++|+|||+|+++|+||||||++||++|.++|++.+++..+.+++ .+++++..
T Consensus 1814 ~Ql~~l~n~iL~~~~~~~~R~l~i~~Y~Vipls~~~GiIe~vpn~~tl~sI~~~~~~~~~i~~~~~~~----~~~~~~~~ 1889 (2105)
T COG5032 1814 LQLIRLMNKILKKDKETRRRDLWIRPYKVIPLSPGSGIIEWVPNSDTLHSILREYHKRKNISIDQEKK----LAARLDNL 1889 (2105)
T ss_pred HHHHHHHHHHHHhChHhhhcCccceeeeeEeccCCcceEEEecCcchHHHHHHHHhhhcCCChhHHhh----hhhhhhhh
Confidence 79999999999999999999999999999999999999999999999999999999999998887762 24556555
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
....|.+.|.......+ +++..++|..+++|..|+.+|+||++|+|+|||+|||||+|||||+|||||..||+++||||
T Consensus 1890 ~~~~~~~~~~~~~~~~~-~~l~~~f~~~f~~~~~w~~aR~Ny~~SlA~ySvigYiLglgDRH~~NIliD~~sG~viHiDF 1968 (2105)
T COG5032 1890 KLLLKDEFFTKATLKSP-PVLYDWFSESFPNPEDWLTARTNFARSLAVYSVIGYILGLGDRHPGNILIDRSSGHVIHIDF 1968 (2105)
T ss_pred cccchhHHhhhhhcCCC-chHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCceEEEEcCCCcEEEehH
Confidence 66678888888887777 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccccccCCCc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVP 240 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~~~~~~~~ 240 (372)
|+||+..++.+++||.|||||||+|+++||+.|+||.|+.+|+.++++||++++.|++++++|++|||++|...+.
T Consensus 1969 g~il~~~p~~~~~pE~vPFrLT~~iv~~mg~~g~EG~Fr~~c~~~~~~LRk~~~~L~~~le~f~~d~l~~W~~~p~---- 2044 (2105)
T COG5032 1969 GFILFNAPGRFPFPEKVPFRLTRNIVEAMGVSGVEGSFRELCETAFRALRKNADSLMNVLELFVRDPLIEWRRLPC---- 2044 (2105)
T ss_pred HHHHhcCCCCCCCcccCcHhhhHHHHHhcCccchhhHHHHHHHHHHHHHhccHHHHHHHHHHHhcCcchhhhcCcc----
Confidence 9999988889999999999999999999999999999999999999999999999999999999999999983110
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCccchhHHHHHHHHhhcCChhhhhhhhHHHHHHHHhhhhcCcCCCCCCCCCcc
Q 017397 241 QMSVFANTHVPPVVNAEETAPNRELPQPQRGARERELLQAVNQLGDASEVLNGRAVVVMARMSNKLTGRDFSSTPLPTSS 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~g~~~~~~~~~~~~ 320 (372)
. ..+ .+..+..+.+|+..|+.|.+...
T Consensus 2045 ------------~---------------~~~-------------------~~~~~~~v~~rf~~kl~~~~~~~------- 2071 (2105)
T COG5032 2045 ------------F---------------REI-------------------QNNEIVNVLERFRLKLSEKDAEK------- 2071 (2105)
T ss_pred ------------c---------------cch-------------------HHHHHHHHHHHHHHHhhhhhhhh-------
Confidence 0 000 01123345688889998876311
Q ss_pred hhhhccccccccCCCCCcCCCCCHHHHHHHHHHHhhCcchhhhhcccccCCC
Q 017397 321 IQQAVDHSTLISGDSREVDHGLSVKLQVQKLIIQATSHENLCQNYVGWCPFW 372 (372)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~lsv~~qV~~LI~~Atd~~nL~~m~~GW~Pw~ 372 (372)
-..++|++||+.||.+||||.|||+||+||+|||
T Consensus 2072 ------------------~~~l~I~~sv~~li~~a~d~~~L~~~yi~w~~f~ 2105 (2105)
T COG5032 2072 ------------------FVDLLINKSVESLITQATDPFQLATMYIGWMPFW 2105 (2105)
T ss_pred ------------------hcCCcHHHHHHHHHHHHcCHHHHHhhccccccCC
Confidence 1568999999999999999999999999999999
No 7
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=100.00 E-value=1.6e-61 Score=455.89 Aligned_cols=230 Identities=36% Similarity=0.633 Sum_probs=202.5
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhh--hhHHHHHhhhcCCCCC
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKIT--LNQEHKYMLSFAPDYD 78 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (372)
||||++||++|+++++|++|+|.+++|.|||+|+++||||||++++||++|+++++...+.. ...........-..+.
T Consensus 47 mQl~~~~n~il~~~~e~~~r~l~i~~y~vipls~~~GLIe~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (279)
T cd05171 47 EQVFQLVNTLLERNKETRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYLVGATGAHERYRPGDWTARKCRKAMAEVQ 126 (279)
T ss_pred HHHHHHHHHHHhhChhhhhcCceeecceEEecCCCceEEEECCCChhHHHHHHHhhhcccccCccchhHHHHHHHHHHhh
Confidence 79999999999999999999999999999999999999999999999999999886432211 0000000000001123
Q ss_pred CcchHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEE
Q 017397 79 HLPLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHI 158 (372)
Q Consensus 79 ~~~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hI 158 (372)
..+...++++|++++++.++ .+.+++|..+++++.|+.+|++|+.|+|++|++|||||||||||+||||++.||+|+||
T Consensus 127 ~~~~~~r~~~f~~i~~~~~p-~l~~~f~~~~~~~~~~~~~r~~F~~S~A~~s~~~yilglgDRh~~NIll~~~tG~v~hi 205 (279)
T cd05171 127 KESNEERLKVFLKICKNFRP-VFRYFFLEKFLDPQDWFERRLAYTRSVATSSIVGYILGLGDRHANNILIDEKTAEVVHI 205 (279)
T ss_pred cCCHHHHHHHHHHHHHhCcH-HHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCcCcEEEE
Confidence 34567899999999988765 78888888899999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 159 DFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 159 Dfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|||++|++++. +++||.|||||||||+++||+.|++|.|+.+|++++++||++++.|+++|++|++||+++|.
T Consensus 206 Df~~~f~~~~~-l~~pe~vPFRLT~~~~~~lg~~g~~g~f~~~~~~~~~~Lr~~~~~l~~~l~~fv~dpl~~W~ 278 (279)
T cd05171 206 DLGIAFEQGKI-LPVPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSWT 278 (279)
T ss_pred echhhhccCcC-CCCCCcCChhhhHHHHHHhCCCCCcchHHHHHHHHHHHHHcChHHHHHHHHHHHhCcccccc
Confidence 99999999875 89999999999999999999999999999999999999999999999999999999999996
No 8
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=100.00 E-value=1.6e-59 Score=431.06 Aligned_cols=188 Identities=35% Similarity=0.673 Sum_probs=178.7
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||||++||.+|++++++++|++.+++|.|+|+++++||||||+++.||++|+++
T Consensus 47 ~Ql~~l~n~~l~~~~~~~~~~l~~~~y~vipls~~~GlIE~v~~~~sl~~i~~~-------------------------- 100 (235)
T cd05172 47 QQLFGVMNNILAQDTACRQRALQLRTYQVIPMTPRFGLIEWLENTTPLKEILKN-------------------------- 100 (235)
T ss_pred HHHHHHHHHHHHhChhhccCCceeecceEEEeCCCCceEEEcCCchhHHHHHhh--------------------------
Confidence 799999999999999999999999999999999999999999999999999874
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
+.+.+++|..+++++.|+.+|++|++|+|++|++|||||||||||+||||++.||+++||||
T Consensus 101 ------------------~~l~~~~~~~~~~~~~~~~~r~~F~~S~A~~S~~~YilglgDRH~~NIli~~~tG~v~HIDf 162 (235)
T cd05172 101 ------------------DLLRRALVEMSASPEAFLSLRDHFAKSLAAMCVSHWILGIGDRHLSNFLVDLETGGLVGIDF 162 (235)
T ss_pred ------------------HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHhheeeccCCCcccEEEECCCCcEEEEee
Confidence 12344566667889999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|++++..+++||.|||||||||+++||+.|++|.|+.+|+.++++||++++.|+++|++|++||+++|.
T Consensus 163 g~~f~~~~~~~~~pE~vPFRLT~~~~~~~g~~g~~G~f~~~~~~~~~~Lr~~~~~l~~~l~~f~~dpl~~w~ 234 (235)
T cd05172 163 GHAFGTATQFLPIPELMPFRLTPQFVNLMEPMKADGLLRSCMVHTLRALRNERHLLLSTMDVFVKEPSLDWK 234 (235)
T ss_pred HhhhccCCccCCCCCCCCeeeCHHHHHHhCCCCCCChHHHHHHHHHHHHHcCHHHHHHHHHHHhhCchhhhc
Confidence 999999987789999999999999999999999999999999999999999999999999999999999996
No 9
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=100.00 E-value=3.4e-57 Score=416.39 Aligned_cols=190 Identities=43% Similarity=0.807 Sum_probs=177.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|+++|.+|.++++|+++++.+++|.|||+++++||||||+++.||++++++++
T Consensus 47 ~ql~~l~n~il~~~~~~~~~~l~~~~y~Vipl~~~~GlIE~v~~~~sl~~i~~~~~------------------------ 102 (237)
T cd00892 47 MEFNTLINRLLSKDPESRRRRLYIRTYAVIPLNEECGIIEWVPNTATLRSILLEIY------------------------ 102 (237)
T ss_pred HHHHHHHHHHHHhCchhccCceeeEeceEEEcCCCCceEEECCCCccHHHHHHHhC------------------------
Confidence 79999999999999999999999999999999999999999999999999998753
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
++.+..+++...++++.|+.+|++|+.|+|++|++|||||||||||+||||++.||+++||||
T Consensus 103 -----------------~~~l~~~~~~~~~~~~~~~~~~~~F~~SlA~~s~~~YilgigDRh~~NIli~~~tG~~~HIDf 165 (237)
T cd00892 103 -----------------PPVFHEWFLENFPDPSAWLKARNAYTRSTAVMSMVGYILGLGDRHGENILFDSNTGDVVHVDF 165 (237)
T ss_pred -----------------CHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccEEEEcCCCcEEEEeh
Confidence 112333445556789999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|++++ .+++||.|||||||||+++||+.|++|.|+.+|++++++||++++.|+++|++|++|||++|.
T Consensus 166 g~~~~~~~-~~~~pe~vPFRLT~~~~~~lg~~g~~g~F~~~~~~~~~~Lr~~~~~l~~~l~~fi~dpl~~w~ 236 (237)
T cd00892 166 NCLFDKGE-TLEVPERVPFRLTQNMVDAMGVLGVEGLFRKSCEVTLRLLRSNKETLMSVLETFIHDPLVEWS 236 (237)
T ss_pred Hhhhcccc-cCCCCCCCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHHhCHHHHHHHHHHHhhccchhcc
Confidence 99999985 578999999999999999999999999999999999999999999999999999999999996
No 10
>KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair]
Probab=100.00 E-value=2.9e-57 Score=504.91 Aligned_cols=337 Identities=65% Similarity=1.062 Sum_probs=287.7
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|++||.++..+.+|.+|+|.+..|.++|++++.|||+||+++.|++.++++|++.++++.+.+++.+..+.++|+.+
T Consensus 2005 mQLf~Lvn~ll~~d~~~~rr~L~iq~Y~~i~ls~~sgL~gWv~~~dtlh~L~r~~r~~k~i~l~~eh~~~~~~~l~~~~l 2084 (2341)
T KOG0891|consen 2005 MQLFGLVNTLLANDSETFRRNLTIQRYSVIPLSPDSGLIGWVPNCDTLHTLIREYREKKKIPLNIEHRVMLQMAPDYDHL 2084 (2341)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHhhhcCCCCCCceeeeecccccHHHHHHHHHHhhccCCcchHHHHHhcCccccch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
...+|+++|++...++.++++++.+|.++.+++.|+.+|.+||+|+|++||+|||+|+|||||+|+|+++.||+++||||
T Consensus 2085 tl~qk~~vfe~~~~~t~G~dl~~~lwlkS~ssEaw~~rrt~yt~S~A~msmvgyilGlGdrhpsNlmldr~tgkvihidf 2164 (2341)
T KOG0891|consen 2085 TLMQKVEVFEYALSNTQGDDLYKVLWLKSPSSEAWLDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLTGKVIHIDF 2164 (2341)
T ss_pred hhhhHHhHhHHHhhcCcHHHHHHHHHHhCCChhHHHHHhhhhHHHHHHHHHHHHHhhccccchhhhhhhhcccceEEech
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccccccCCCc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVP 240 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~~~~~~~~ 240 (372)
|.||+.++...++||.+|||||++++++|.+.|.+|.|+.+|+.+++++|.+++.+++++++|++||++.|.........
T Consensus 2165 gdcfevA~~rek~pe~~pfRlTrmli~amev~gl~g~~~~t~e~v~~~lr~~~~sl~a~leafvydplinwr~~~~~~~~ 2244 (2341)
T KOG0891|consen 2165 GDCFEVAMLREKFPEKVPFRLTRMLINAMEVTGIEGTYRITCEHVMRVLRTNKESLMAVLEAFVYDPLINWRLDDVLSPG 2244 (2341)
T ss_pred HHHHHHHHhhccccccccHHHHHHHHHhHHHHhhhhHHHHHHHHHHHhhcCChHHHHHHHHhhhcccchhhhcccccchh
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999975322110
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCccchhHHHHHHHHhhcCChhhhhhhhHHHHHHHHhhhhcCcCCCCCCCCCcc
Q 017397 241 QMSVFANTHVPPVVNAEETAPNRELPQPQRGARERELLQAVNQLGDASEVLNGRAVVVMARMSNKLTGRDFSSTPLPTSS 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~g~~~~~~~~~~~~ 320 (372)
....-.....+.....+.+. + .....+........ ...++.+.++..+++|+..|+.|+++..
T Consensus 2245 ~~~~~~~~~~~~~~~~e~~~-------~--~a~~~~~~~~~~~~-~~~e~~n~~~~~vl~~~~~kltg~~~~~------- 2307 (2341)
T KOG0891|consen 2245 KDEEEVGEKDPLKNRKELGL-------P--RAMAGEEIAVLESS-VKPEALNARAIQVLKRISDKLTGRDFVH------- 2307 (2341)
T ss_pred hhhcccCCCCcccchhhhcc-------H--Hhhhcccccccccc-ccccccChhhHHHHHhcccccceeeccC-------
Confidence 00000000000000000000 0 00000000000011 2234567788899999999999998642
Q ss_pred hhhhccccccccCCCCCcCCCCCHHHHHHHHHHHhhCcchhhhhcccccCCC
Q 017397 321 IQQAVDHSTLISGDSREVDHGLSVKLQVQKLIIQATSHENLCQNYVGWCPFW 372 (372)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~lsv~~qV~~LI~~Atd~~nL~~m~~GW~Pw~ 372 (372)
..+++|.+||++||+|||+|+|||+-|+||+|||
T Consensus 2308 ------------------~~~l~v~~qv~~l~~qats~e~lc~~yigwcpfw 2341 (2341)
T KOG0891|consen 2308 ------------------EEPLDVPEQVEKLIQQATSPENLCQCYIGWCPFW 2341 (2341)
T ss_pred ------------------cccCcHHHHHHHHHHhhcChHhhhcccccCCCCC
Confidence 3679999999999999999999999999999988
No 11
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=100.00 E-value=6.9e-54 Score=386.75 Aligned_cols=183 Identities=43% Similarity=0.729 Sum_probs=171.3
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|+++|.+|+++++++++++++++|.|+|+++++||||||+++.|+++|+.+|
T Consensus 17 ~ql~~~~n~il~~~~e~~~~~l~~~~y~vip~~~~~GlIE~v~~~~sl~~il~~~------------------------- 71 (202)
T smart00146 17 LQLLRLMNKILQKDGETRRRDLHLRPYKVIPTGPKSGLIEVVPNSTTLHQILYDW------------------------- 71 (202)
T ss_pred HHHHHHHHHHHHhCcccccCceEeeeeEEEEcCCCcceEEEcCCchhHHHHHHHH-------------------------
Confidence 7999999999999999999999999999999999999999999999999984332
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
++...+++..|+.+|++|++|+|++|+++||||||||||+||||+ +||+++||||
T Consensus 72 ------------------------~~~~~~~~~~~~~~~~~F~~SlA~~s~~~YilglgDRh~~NIli~-~~G~v~hIDf 126 (202)
T smart00146 72 ------------------------FKKKFPDPEDYFEARKNFTRSCAGYSVITYILGLGDRHNDNIMLD-KTGHLFHIDF 126 (202)
T ss_pred ------------------------HHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEe-CCCCEEEEec
Confidence 233345788999999999999999999999999999999999999 7999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 233 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~ 233 (372)
|++|++++.....||.|||||||||+++||+.|++|.|+..|++++.+||++++.|++++++|++||+.+|..
T Consensus 127 g~~~~~~~~~~~~~e~vPFRLT~~~~~~lg~~~~~g~F~~~~~~~~~~Lr~~~~~i~~~l~~~~~d~l~~~~~ 199 (202)
T smart00146 127 GFILGNGPKLFGFPERVPFRLTPEMVDVMGDSGYFGLFRSLCERALRALRKNSNLIMSLLELMLYDGLPDWRS 199 (202)
T ss_pred hhhhCccccCCCCCCCCCeecCHHHHHHhCCCcccchHHHHHHHHHHHHHcCHHHHHHHHHHHcCCCChhhcC
Confidence 9999999766555699999999999999999999999999999999999999999999999999999999985
No 12
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=100.00 E-value=2.3e-53 Score=387.61 Aligned_cols=176 Identities=48% Similarity=0.900 Sum_probs=166.1
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|+++|.+|+++.+|+++++.+++|.|+|+|+++||||||+|+.||++++++|
T Consensus 47 ~ql~~~~n~il~~~~~~~~~~l~~~~y~vipls~~~GliE~v~~~~sl~~~l~~~------------------------- 101 (222)
T cd05164 47 MQLFQFCNTLLAKDAECRRRKLTIRTYAVIPLNSRSGLIEWVEGTTTLKPVLKKW------------------------- 101 (222)
T ss_pred HHHHHHHHHHHHhCchhccCceEeecceEEEcCCCCceEEEcCCcchHHHHHHHH-------------------------
Confidence 7999999999999999999999999999999999999999999999999555432
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
+|..+++++.|+.+|++|+.|+|++|+++||||||||||+||||++.||+++||||
T Consensus 102 ------------------------~~~~~~~~~~~~~~r~~F~~SlA~~s~~~YvlglgDRh~~NIli~~~tG~v~hIDf 157 (222)
T cd05164 102 ------------------------FWLQFPDPEQWFAARKNYTRSTAVMSIVGYILGLGDRHLDNILIDRETGEVVHIDF 157 (222)
T ss_pred ------------------------HHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCceEEEECCCCcEEEEcc
Confidence 34455789999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccC
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHD 226 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~D 226 (372)
|++|++++ .+++||.|||||||||+++||+.|++|.|+.+|++++++||++++.|+++|++|++|
T Consensus 158 ~~~~~~~~-~~~~~e~vPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~~~~~l~s~l~~fv~d 222 (222)
T cd05164 158 GCIFEKGK-TLPVPELVPFRLTRNIINGMGITGVEGLFRKICEQTLEVFRKHRDTLIAFLEVFVYD 222 (222)
T ss_pred HHhhccCC-CCCCCCCCCEEeCHHHHHHhCCCCcCChHHHHHHHHHHHHHhCHHHHHHHHHHHhcC
Confidence 99999985 467899999999999999999999999999999999999999999999999999997
No 13
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=100.00 E-value=1.8e-50 Score=379.69 Aligned_cols=183 Identities=27% Similarity=0.414 Sum_probs=160.1
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|++||.+|+++ +++|+++||.|+|+++++||||||+|+.||++|.+++...
T Consensus 50 ~Ql~~~~~~i~~~~----~l~l~l~~Y~vip~~~~~GlIE~V~ns~tl~~i~k~~~~~---------------------- 103 (293)
T cd05168 50 MQLIQQFDRIFKEE----GLPLWLRPYEILVTSSNSGLIETIPDTVSIDSLKKKLTSK---------------------- 103 (293)
T ss_pred HHHHHHHHHHHHHC----CCCceeeeEEEEEccCCceeEEEeCCchhHHHHHHHhccC----------------------
Confidence 79999999999975 5789999999999999999999999999999998875320
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCC-hHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRT-SEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~-~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
.+.+..++.....+ ++.|+.+|.+|++|+|+||++||||||||||++||||++ +|+++|||
T Consensus 104 -----------------~~~l~~~f~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YvLGigDRH~~NILi~~-~G~liHID 165 (293)
T cd05168 104 -----------------FKSLLDFFKKTFGDPSERFREAQKNFIESLAGYSLICYLLQIKDRHNGNILIDN-DGHIIHID 165 (293)
T ss_pred -----------------CchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEcC-CCCEEEEe
Confidence 01122222222222 578999999999999999999999999999999999997 99999999
Q ss_pred ccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcc--cchHHHHHHHHHHHhcCchHHHHHHHHHccCcc
Q 017397 160 FGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIE--GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPL 228 (372)
Q Consensus 160 fg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~e--G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl 228 (372)
||++|+.+++. ..||.||||||++|+++||+.+.+ |.|+..|+.++.+||++++.|++++++|+++|-
T Consensus 166 FG~~fg~~~~~-~~~E~vPFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR~~~~~il~ll~~m~~~~~ 235 (293)
T cd05168 166 FGFMLSNSPGN-VGFETAPFKLTQEYIEVMGGVNSDLFNYFKKLFLKGFMALRKHVDRIILLVEIMQSDSK 235 (293)
T ss_pred hHHhhcccccC-CCCCCCCEEecHHHHHHhCCCCCchhHHHHHHHHHHHHHHHhchHHHHHHHHHHccCCC
Confidence 99999998765 567999999999999999988876 899999999999999999999999999999953
No 14
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=100.00 E-value=1.3e-49 Score=363.21 Aligned_cols=173 Identities=42% Similarity=0.677 Sum_probs=160.4
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+++++|.+|+++. ++++.+++|.|||+|+++||||||+++.|++.++
T Consensus 47 ~ql~~~~n~il~~~~---~~~l~~~~y~vipls~~~GlIE~v~~~~sl~~~l---------------------------- 95 (219)
T cd00142 47 LQFIRLMNKILKKEL---GLDLFLTTYSVIPLSPRSGLIEVVPGSVTLEDDL---------------------------- 95 (219)
T ss_pred HHHHHHHHHHHHhCC---CCCceEEeEEEEEecCCceEEEEeCCCchhHHHH----------------------------
Confidence 699999999999876 7899999999999999999999999999998333
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
.++++..+++++.|+.+|++|+.|+|++|+++||||||||||+||||++.||+++||||
T Consensus 96 ---------------------~~~~~~~~~~~~~~~~~~~~F~~SlA~~s~~~YilglgDRh~~NIli~~~~G~~~hIDf 154 (219)
T cd00142 96 ---------------------SKWLKRKSPDEDEWQEARENFISSLAGYSVAGYILGIGDRHPDNIMIDLDTGKLFHIDF 154 (219)
T ss_pred ---------------------HHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccEEEECCCCeEEEEee
Confidence 23345556788899999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccC
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHD 226 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~D 226 (372)
|++|++++.. ..||.|||||||||+++||+.|++|.|+.+|+.++.+||+|++.|+++|++|++|
T Consensus 155 g~~~~~~~~~-~~~e~vPFRLT~~~~~~~g~~~~~g~F~~~~~~~~~~lr~~~~~i~~ll~~~~~~ 219 (219)
T cd00142 155 GFIFGKRKKF-LGRERVPFRLTPDLVNALGTGGVFGPFRSLCVKAMLILRRHAGLLLNLLSLMLRD 219 (219)
T ss_pred HHhhCcCcCC-CCCCCCCEeccHHHHHHhCCcchhhhHHHHHHHHHHHHHhChHHHHHHHHHhccC
Confidence 9999998754 4599999999999999999999999999999999999999999999999999987
No 15
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....
Probab=100.00 E-value=2.7e-50 Score=372.08 Aligned_cols=212 Identities=44% Similarity=0.792 Sum_probs=161.3
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|+++|.+|.++.+++. +++|.|+|+++++||||||+++.||.+|+++++...+.......
T Consensus 19 ~ql~~~~n~~l~~~~~~~~----~~~Y~vipls~~~Glie~v~~~~tl~~i~~~~~~~~~~~~~~~~------------- 81 (235)
T PF00454_consen 19 MQLFRLMNRILKKEGETRE----IRTYRVIPLSPNCGLIEWVPNTITLQEIYKTYCVRIGHSNDNPS------------- 81 (235)
T ss_dssp HHHHHHHHHHHHHTT-------------EEEEETTEEEEE--TTEEEHHHHHHHSTTSSTTTCSC---------------
T ss_pred HHHHHHHHHHHhcCCCCce----EEEeEEEecCCCCceeEEeccccchhHhhccccccccccccccc-------------
Confidence 7999999999999987755 99999999999999999999999999999987654432211100
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
...+...++......+++.+..+++....+++.|+.+|++|+.|+|++|+++||||+|||||+||||+..||+++||||
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~r~~f~~sla~~si~~yilg~gDRh~~Nili~~~~g~~~hIDf 160 (235)
T PF00454_consen 82 -RKYKAKLFEKQSSKVPKDGLRQYFLKSFPSAEEWFEARKNFTRSLAAYSILDYILGLGDRHPGNILIDKKTGELIHIDF 160 (235)
T ss_dssp -----------------TTHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHHHHHHHT-CS--TTTEEE-ETTSEEEE--H
T ss_pred -cccccccccccccccccchHHHHHHhcCCChhhhHhhhHhhHHHHHHHhhceEEEeecCCCchhheeccccceeeeEEe
Confidence 0001111444455667778888888888999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhh----hccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAM----EVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~l----g~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|+ ++ .++.||.||||||+||+++| |+.|.+|.|+.+|+.++++||++++.|+++|++|++||+++|.
T Consensus 161 g~~f~-~~-~~~~~e~vPFrLT~~~~~~~~~~l~~~~~~g~f~~~~~~~~~~lr~~~~~l~~ll~~~~~d~l~~w~ 234 (235)
T PF00454_consen 161 GFIFG-GK-HLPVPETVPFRLTRNMVNAMGGYLGPSGVEGLFRSSCEAILRALRRNKDLLLSLLELFLRDPLIDWR 234 (235)
T ss_dssp SSCTT-HH-HGSSSS--SSTTHHHHHHHTTTSSSTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTSCSTTSS
T ss_pred HHhhh-cc-ccCCCCCCCeEeCHHHHHHHhccCCCchhHhHHHHHHHHHHHHHhcChHHHHHHHHHHHhCCCCCCC
Confidence 99999 43 46789999999999999999 9999999999999999999999999999999999999999996
No 16
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=100.00 E-value=7.3e-49 Score=368.21 Aligned_cols=187 Identities=28% Similarity=0.453 Sum_probs=163.5
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|++||.+|++. +++|+++||.|||+|+++||||||+|+.|+++|.+++..
T Consensus 50 ~Ql~~l~~~i~~~~----~l~l~l~~Y~vi~~s~~~GlIE~V~ns~tl~~i~~~~~~----------------------- 102 (289)
T cd00893 50 TQIITELQKIFELM----FLDLWLNPYLVLPVSKTGGIIEFIPNSISIHEIKKQQIN----------------------- 102 (289)
T ss_pred HHHHHHHHHHHHHc----CCCceeEEEEEEECCCCceeEEEeCCchhHHHHHHhccc-----------------------
Confidence 79999999999875 589999999999999999999999999999999875410
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
+ ..+.|.+. ...++++.|+++|.+|++|+|+||++||||||||||++|||||. +|+++||||
T Consensus 103 ~---l~~~~~~~--------------~~~~~~~~~~~a~~nF~~SlA~ySvv~YiLgigDRH~~NILid~-~G~liHIDF 164 (289)
T cd00893 103 S---LYDYFLEL--------------YGSYTTEAFLQARYNFIESMAGYSLLCYLLQIKDRHNGNILLDS-DGHIIHIDF 164 (289)
T ss_pred c---HHHHHHHH--------------cCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEECC-CCCEEEEeh
Confidence 0 01111110 01246788999999999999999999999999999999999996 999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcc--cchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIE--GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~e--G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|+.+++....||.||||||++|+++||+.|.+ +.|+..|+.++.+||+|++.|++++++|+++|+.+|.
T Consensus 165 G~ilg~~p~~~~~~E~~PFrLT~emv~~mGg~~s~~f~~F~~~c~~~~~~lR~~~~~il~ll~~m~~~~lp~~~ 238 (289)
T cd00893 165 GFILDSSPGNNLGFEPAAFKFTKEMVDFMGGKKSDDFKKFRYLCLRGFIAVRKHMDLVISLVYLLIFSGLPCFR 238 (289)
T ss_pred HHhhCcCCcCCCCCCCCCeeecHHHHHHhCCCCChhHHHHHHHHHHHHHHHhhCHHHHHHHHHHHccCCCcccC
Confidence 99999987653457999999999999999988876 7899999999999999999999999999999999986
No 17
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin
Probab=100.00 E-value=1.5e-47 Score=368.60 Aligned_cols=179 Identities=29% Similarity=0.527 Sum_probs=156.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|+++. ++|+++||.|||+++++||||||+ +.|+++|.++|....
T Consensus 113 ~Ql~~lm~~il~~~~----ldl~l~~Y~Vip~~~~~GlIE~V~-s~tl~~i~~~~~~l~--------------------- 166 (350)
T cd00896 113 IQIISLMDRLLKKEN----LDLKLTPYKVLATSPTDGLVEFIP-SVTLASILKKYGGIL--------------------- 166 (350)
T ss_pred HHHHHHHHHHHHhCC----CCceeEEEEEEEcCCCCcceEEEe-cccHHHHHHHHHHHH---------------------
Confidence 799999999999874 899999999999999999999999 999999998764310
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHH----HHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEE
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEI----WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKIL 156 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~----w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~ 156 (372)
+ ++....+++.. |..++.+|++|+|+||++||||||||||++||||+. +|+++
T Consensus 167 ------~----------------~l~~~~~~~~~~~~~~~~a~~nF~~S~A~ysvv~YiLGigDRH~~NILi~~-~G~~~ 223 (350)
T cd00896 167 ------N----------------YLRKLNPDDGGPLGISPEVMDTFVKSCAGYCVITYILGVGDRHLDNLLLTK-DGKLF 223 (350)
T ss_pred ------H----------------HHHHHCCCccccccchHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEcC-CCCEE
Confidence 0 11111122222 467899999999999999999999999999999995 99999
Q ss_pred EEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCccc--chHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 157 HIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEG--NFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 157 hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG--~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|||||++|++++ .|+.||||||++|+++||+.|.+| .|+..|+.++.+||+|++.|++++++|+.+++.+|.
T Consensus 224 HIDFG~ilg~~p----~~~~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~lR~~~~~il~l~~lm~~~~ip~~~ 297 (350)
T cd00896 224 HIDFGYILGRDP----KPFPPPMKLCKEMVEAMGGAQSEGYQEFKSYCCEAYNILRKSANLILNLFSLMVDANIPDIA 297 (350)
T ss_pred EEEhHHhhCCCC----CCCCCCeeccHHHHHHhCCCCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHHHcCCCCcccc
Confidence 999999998864 367899999999999999999999 999999999999999999999999999999887764
No 18
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=100.00 E-value=1.2e-47 Score=369.95 Aligned_cols=193 Identities=26% Similarity=0.441 Sum_probs=166.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|+++ +.+|++++|.|||+++++||||||+|+.|+++|.+++....+
T Consensus 108 ~Ql~~l~~~i~~~~----~ldl~l~~Y~Vip~~~~~GlIE~V~ns~tl~~I~~~~~~~~~-------------------- 163 (352)
T cd00891 108 LQMIRLMDKIWKKE----GLDLRMTPYGCIATGDGVGMIEVVPNSETIAKIQKKAGGVGG-------------------- 163 (352)
T ss_pred HHHHHHHHHHHHHC----CCCeeeEEEEEEEccCCceEEEEeCCCccHHHHHHhcCcccc--------------------
Confidence 79999999999876 478999999999999999999999999999999987532111
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
+|+ .+.+..++....++++.|..+|.+|++|+|+||++||||||||||++||||+. +|+++||||
T Consensus 164 -------~~~-------~~~l~~~~~~~~~~~~~~~~a~~nF~~S~A~ysv~~YiLgigDRH~~NILi~~-~G~~~HIDF 228 (352)
T cd00891 164 -------AFK-------DNPLMNWLKKKNKGEEDYEKAVENFTYSCAGYCVATYVLGIGDRHNDNIMLTK-TGHLFHIDF 228 (352)
T ss_pred -------ccc-------cchHHHHHHHhCCCHHHHHHHHHHHhhhHHHHHHHHHHccccccCCCceEECC-CCCEEEEeh
Confidence 010 11233333333466789999999999999999999999999999999999995 999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCcc--cchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGIE--GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~e--G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|+..+..++ .||.||||||++|+++||+.|.+ |.|+..|+.++.+||+|++.|++++++|+..++.+|.
T Consensus 229 G~ilg~~~~~~~~~~E~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR~~~~~il~l~~lm~~~~lp~~~ 303 (352)
T cd00891 229 GHFLGNFKKKFGIKRERAPFVLTPDMAYVMGGGDSEKFQRFEDLCCKAYNILRKHGNLFINLFSLMLSAGIPELQ 303 (352)
T ss_pred HHhhccCCccCCCCCCCCCeeecHHHHHHhCCCCCcccchHHHHHHHHHHHHhcCHHHHHHHHHhhccCCCCccC
Confidence 999997654444 58999999999999999998865 9999999999999999999999999999999998875
No 19
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any
Probab=100.00 E-value=4.2e-47 Score=365.60 Aligned_cols=192 Identities=20% Similarity=0.356 Sum_probs=164.8
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||++|+++ +.+|++++|.|+|+|+++||||||+|+.|+++|.+++... ..+
T Consensus 108 ~Qli~lm~~i~~~~----~ldL~l~~Y~vip~~~~~GlIE~V~ns~tl~~I~~~~g~~----------------~~~--- 164 (353)
T cd05166 108 LQMINIMDKIWLQE----GLDLRMITFRCLSTGYDRGMVELVPDAETLRKIQVEEGLT----------------GSF--- 164 (353)
T ss_pred HHHHHHHHHHHHhC----CCCceeEEEEEEEcCCCcceEEEeCCchhHHHHHHHhCcc----------------ccc---
Confidence 79999999999875 4789999999999999999999999999999998754210 000
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
....+..+++...+++..|..+|.+|++|+|+||++||||||||||++||||+ .+|+++||||
T Consensus 165 ----------------~~~~l~~~l~~~~~~~~~~~~a~~nF~~S~A~ysvv~YiLgigDRH~~NILl~-~~G~l~HIDF 227 (353)
T cd05166 165 ----------------KDRPIAKWLMKHNPSELEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLT-KSGHMFHIDF 227 (353)
T ss_pred ----------------cchhHHHHHHHhCCChHHHHHHHHHHHhHHHHHHHHHHHhhccccCCCceEEC-CCCCEEEEee
Confidence 01124444444567788999999999999999999999999999999999999 5999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhcc----CcccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVS----GIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~----g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|+.++.... .||.||||||++|+++||.. +.++.|+..|+.++.+||+|++.|++++++|+.+++.+|.
T Consensus 228 G~~lg~~~~~~~~~~E~~PFrLT~emv~~~ggg~~~s~~~~~F~~~c~~~~~~lRk~~~~il~ll~~ml~s~lp~~~ 304 (353)
T cd05166 228 GKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKHANLLLNLLRMMACSGLPELS 304 (353)
T ss_pred HHhcccccccccCCCCCCCccccHHHHHHhcCCCCCcchHhHHHHHHHHHHHHHHcChHHHHHHHHHHhcCCCcccC
Confidence 999998654333 47999999999999999854 3457999999999999999999999999999999999996
No 20
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P
Probab=100.00 E-value=9.3e-47 Score=363.04 Aligned_cols=192 Identities=24% Similarity=0.440 Sum_probs=163.7
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||+|++||.+|+++ ..+|+++||.|+|+|+++|+||||+|+.|+++|.+++.... ...+.
T Consensus 116 lQli~lm~~i~~~~----~ldL~l~pY~vl~t~~~~GlIE~V~ns~tl~~I~~~~~~~~--------------~~~f~-- 175 (366)
T cd05165 116 LQILRIMDSIWKEE----GLDLRMLPYGCLSTGDKIGLIEVVRDSTTIANIQQETGGNA--------------TAAFK-- 175 (366)
T ss_pred HHHHHHHHHHHHhC----CCCceeEEEEEEEecCCceEEEEeCCchhHHHHHHhccccc--------------ccccC--
Confidence 79999999999875 47899999999999999999999999999999987542100 00110
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhc--CChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEE
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKS--RTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHI 158 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~--~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hI 158 (372)
...+. .|++. ++++.|..++.+|++|+|+||++||||||||||++||||+. +|+++||
T Consensus 176 -----------------~~~l~--~wl~~~~~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRH~~NILi~~-~G~l~HI 235 (366)
T cd05165 176 -----------------KEALL--HWLKEKNPTEEKLDAAIEEFTLSCAGYCVATFVLGIGDRHNDNIMVKE-TGQLFHI 235 (366)
T ss_pred -----------------cHHHH--HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcceEEcC-CCCEEEE
Confidence 01122 24443 44688999999999999999999999999999999999996 9999999
Q ss_pred eccchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCcc------cchHHHHHHHHHHHhcCchHHHHHHHHHccCccccc
Q 017397 159 DFGDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGIE------GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 231 (372)
Q Consensus 159 Dfg~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~e------G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W 231 (372)
|||++|+..+..++ .||.||||||++|+++||+.|.+ |.|+..|+.++.+||+|++.|++++++++..++.++
T Consensus 236 DFG~ilg~~~~~~~i~~E~~PFkLT~emv~~mg~~~~~~~s~~f~~F~~~c~~a~~~LR~~~~~il~l~~lM~~s~ip~~ 315 (366)
T cd05165 236 DFGHILGNYKSKFGINRERVPFVLTPDFVHVIGRGKKDNTSEHFQRFQDLCEKAYLALRRHGNLLIILFSMMLMSGLPEL 315 (366)
T ss_pred ehHHhhccCCccCCCCCCCCCeeecHHHHHHhcccCCcCCChhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHhcCCCccc
Confidence 99999998765555 49999999999999999987765 899999999999999999999999999998888776
Q ss_pred c
Q 017397 232 R 232 (372)
Q Consensus 232 ~ 232 (372)
.
T Consensus 316 ~ 316 (366)
T cd05165 316 T 316 (366)
T ss_pred C
Confidence 5
No 21
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole
Probab=100.00 E-value=1.3e-45 Score=348.81 Aligned_cols=185 Identities=30% Similarity=0.479 Sum_probs=155.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||++|++. +++|++++|.|+|+++++|+||||+|+.|+++|.+.+..
T Consensus 71 ~Qli~lm~~i~~~~----~ldl~l~~Y~vi~t~~~~GlIE~V~ns~s~~~i~~~~~~----------------------- 123 (311)
T cd05167 71 LQLISLFKNIFQSA----GLDLYLFPYRVVATGPGCGVIEVVPNSKSRDQIGRTTDN----------------------- 123 (311)
T ss_pred HHHHHHHHHHHHHC----CCCeEeEEEeEEecCCCceEEEEeCCcHHHHHHHhhccc-----------------------
Confidence 79999999999864 589999999999999999999999999999988653210
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
.-.+.|.+. . ..+++..|..+|.+|++|+|+||++||||||||||++||||+. +|+++||||
T Consensus 124 ---~l~~~f~~~---~-----------~~~~~~~~~~a~~nF~~S~Agysv~tYiLgigDRHn~NILid~-~G~l~HIDF 185 (311)
T cd05167 124 ---GLYEYFTSK---Y-----------GDESSLAFQKARENFIRSMAAYSLISYLLQIKDRHNGNIMIDD-DGHIIHIDF 185 (311)
T ss_pred ---HHHHHHHHH---c-----------CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceEEcC-CCCEEEEee
Confidence 001111110 0 1235688999999999999999999999999999999999997 999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCccc---chHHHHHHHHHHHhcCchHHHHHHHHHccCcccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEG---NFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLIN 230 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG---~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~ 230 (372)
|++|+.+++....+|.||||||++|+++||+.+..| .|+..|+.++.+||+|.+.|++++++|+...+.+
T Consensus 186 G~il~~~p~~~~~~E~~PFkLT~emv~~mGg~~~s~~f~~F~~~~~~~~~~lR~~~~~il~l~~lm~~s~lp~ 258 (311)
T cd05167 186 GFIFEISPGGNLKFESAPFKLTKEMVQIMGGSMEATPFKWFVELCVRAFLAVRPYMDEIVSLVELMLDSGLPC 258 (311)
T ss_pred HHhhccCCCCCCCcCCCCEeecHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCchh
Confidence 999998765423469999999999999999887554 7778999999999999999999999998655544
No 22
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=100.00 E-value=6e-46 Score=355.96 Aligned_cols=192 Identities=22% Similarity=0.396 Sum_probs=163.9
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|++. +.+|+++||.|+|+++++||||||+|+.|+++|.+++.... .+
T Consensus 109 lQli~lmd~i~~~~----~ldl~l~pY~vl~t~~~~GlIE~V~ns~tl~~I~~~~~~~~----------------~~--- 165 (354)
T cd05177 109 LQIVRVMDNIWLQE----GLDMQMIIYRCLSTGKTQGLVQMVPDAVTLAKIHRESGLIG----------------PL--- 165 (354)
T ss_pred HHHHHHHHHHHHHc----CCCceEEEEEEEecCCCceEEEEeCChHhHHHHHHhhCCCc----------------cc---
Confidence 69999999999976 57899999999999999999999999999999997642100 00
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
..+.+..++....++++.|..++.+|++|+|+||++||||||||||++||||+ .+|+++||||
T Consensus 166 ----------------~~~~l~~~~~~~~~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRHn~NILi~-~~G~~~HIDF 228 (354)
T cd05177 166 ----------------KENTIEKWFHMHNKLKEDYDKAVRNFFHSCAGWCVVTFILGVCDRHNDNIMLT-HSGHMFHIDF 228 (354)
T ss_pred ----------------chhhHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCceeEc-CCCCEEEEeh
Confidence 01123334444456788999999999999999999999999999999999999 5999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCccc----chHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGIEG----NFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~eG----~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
|++|+.++.... .||.||||||++|+.++|..|.++ .|+..|+.++.+||+|++.|++++++|+.+++.+|.
T Consensus 229 G~ilg~~~~~~~~~~E~~PF~LT~emv~~~~~GG~~s~~f~~F~~~c~~a~~~lR~~~~~il~l~~lm~~s~iP~~~ 305 (354)
T cd05177 229 GKFLGHAQTFGSIKRDRAPFIFTSEMEYFITEGGKKPQRFQRFVELCCRAYNIVRKHSQLLLNLLEMMLHAGLPELK 305 (354)
T ss_pred HHhcCCCccccCCCcCCCCeeccHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCcccC
Confidence 999998764333 379999999999999887666653 699999999999999999999999999999999986
No 23
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=3.5e-45 Score=351.10 Aligned_cols=191 Identities=23% Similarity=0.401 Sum_probs=160.1
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|+.. +++|++++|.|+|+++++|+||||+|+.|+++|.+.+....+ .+
T Consensus 117 lQli~lmd~i~~~~----~ldL~l~pY~vi~tg~~~GlIE~V~ns~tl~~I~~~~~~~~~---------------~~--- 174 (365)
T cd00894 117 LQILRIMESIWETE----SLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGNTG---------------AF--- 174 (365)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEEEEEEEecCCceEEEEcCCchhHHHHHHhcccccc---------------cc---
Confidence 79999999999764 589999999999999999999999999999999864321000 00
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
..+.+..++....++++.|..++.+|++|+|+||++||||||||||++||||+. +|+++||||
T Consensus 175 ----------------k~~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsV~tYiLGIgDRHndNImi~~-~G~lfHIDF 237 (365)
T cd00894 175 ----------------KDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDF 237 (365)
T ss_pred ----------------cchhHHHHHHHhCCCHHHHHHHHHHHHHHhHHHHHHHHhccccCccccceeEcC-CCCEEEEee
Confidence 011233333333467889999999999999999999999999999999999995 999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCcc-----cchHHHHHHHHHHHhcCchHHHHHHHHHccCcccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGIE-----GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLIN 230 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~e-----G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~ 230 (372)
|++|+.++..+. .||.||||||++|+++||+.|.+ +.|+..|+.++.+||+|.+.|++++++++.--+.+
T Consensus 238 G~ilg~~~~~~gi~~E~~PFkLT~e~v~vmg~~gg~~s~~f~~F~~~c~~a~~~LRk~~~lil~L~~lM~~sgip~ 313 (365)
T cd00894 238 GHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQ 313 (365)
T ss_pred HHhhCCCCccCCCCCCCCCeeecHHHHHHhCccCCcCChhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCcc
Confidence 999998765444 48999999999999999987655 47999999999999999999999999998654443
No 24
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de
Probab=100.00 E-value=1.1e-44 Score=348.21 Aligned_cols=193 Identities=28% Similarity=0.490 Sum_probs=158.2
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||++|++. +++|++++|.|+|+|+++||||||+|+.|+++|...+.... ....
T Consensus 112 lQli~lm~~i~k~~----~ldL~l~pY~vi~t~~~~GlIE~V~ns~tl~~I~~~~~~~~-------------~~~~---- 170 (362)
T cd05173 112 LQILRLMDTLWKEA----GLDLRIVPYGCLATGDRSGLIEVVSSAETIADIQLNSSNVA-------------AAAA---- 170 (362)
T ss_pred HHHHHHHHHHHHHC----CCCeeeEEEEEEEccCCceEEEEeCCchhHHHHHHhccccc-------------hhcc----
Confidence 79999999999975 58899999999999999999999999999999975432100 0000
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcC-ChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSR-TSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~-~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
|. .+.+. .|++.. .++.|..++.+|++|+|+||++||||||||||++||||+. +|+++|||
T Consensus 171 --------f~-------~~~l~--~~l~~~~~~~~~~~a~~nF~~S~AgYsvvtYILGIGDRHn~NILi~~-~G~l~HID 232 (362)
T cd05173 171 --------FN-------KDALL--NWLKEYNSGDDLERAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRK-NGQLFHID 232 (362)
T ss_pred --------cC-------hhHHH--HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEECC-CCCEEEEe
Confidence 10 01122 244433 3456777899999999999999999999999999999995 99999999
Q ss_pred ccchhhhhcCCC-CCCCCCCeeecHhhHHhhh--ccC---cccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccc
Q 017397 160 FGDCFEASMNRE-KFPEKVPFRLTRMLVKAME--VSG---IEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWR 232 (372)
Q Consensus 160 fg~~f~~~~~~l-~~pE~VPFRLT~ni~~~lg--~~g---~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~ 232 (372)
||++|+..+..+ ..||.||||||++|+++|| ..| .+|.|+..|+.++.+||+|++.|++++++++..++.++.
T Consensus 233 FG~ilg~~~~~~~~~~E~vPFkLT~emv~vm~~G~~g~s~~~~~F~~~c~~a~~~LRk~~~lil~l~~lM~~s~ip~~~ 311 (362)
T cd05173 233 FGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQYCEDAYLILRKNGNLFITLFALMLTAGLPELT 311 (362)
T ss_pred hHHhhccCCcccCCCCCCCCeeecHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCcccc
Confidence 999998754433 3589999999999999995 223 478999999999999999999999999999998887764
No 25
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=3.8e-44 Score=343.45 Aligned_cols=191 Identities=28% Similarity=0.464 Sum_probs=154.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|+++ +++|++++|.|+|+++++||||||+|+.|+++|.+.+.... .
T Consensus 112 ~Qli~lmd~i~k~~----~ldL~l~pY~vi~tg~~~GlIE~V~ns~Tl~~I~~~~~~~~-------------~------- 167 (361)
T cd05174 112 LQMIQLMDVLWKQE----GLDLRMTPYGCLSTGDKTGLIEVVKNSDTIANIQLNKSNMA-------------A------- 167 (361)
T ss_pred HHHHHHHHHHHHHC----CCCeeeEEEEEEEecCCceEEEEeCCchhHHHHHHhhcccc-------------h-------
Confidence 79999999999875 58999999999999999999999999999999986532100 0
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChH-HHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSE-IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~-~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
...|++ +.+ ..|+++.+++ .|..++.+|++|||+||++||||||||||++||||+. +|+++|||
T Consensus 168 -----~~~f~~-------~~l--~~~l~~~~~~~~~~~A~~nF~~S~AgysVvtYiLGIGDRHn~NILi~~-~G~l~HID 232 (361)
T cd05174 168 -----TAAFNK-------DAL--LNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRE-SGQLFHID 232 (361)
T ss_pred -----hccccc-------hHH--HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccCcCccceeEcC-CCCEEEEe
Confidence 000110 112 2355554443 4556789999999999999999999999999999985 99999999
Q ss_pred ccchhhhhcCCC-CCCCCCCeeecHhhHHhhhccCc-----ccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccc
Q 017397 160 FGDCFEASMNRE-KFPEKVPFRLTRMLVKAMEVSGI-----EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLIN 230 (372)
Q Consensus 160 fg~~f~~~~~~l-~~pE~VPFRLT~ni~~~lg~~g~-----eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~ 230 (372)
||++|+..+... ..||.||||||++|+++||..|. .+.|+..|+.++.+||+|++.|++++++++...+.+
T Consensus 233 FG~ilg~~~~~~~~~~E~vPFkLT~e~v~vmg~G~~~~s~~f~~F~~~c~~a~~~LRk~~~~il~l~~lM~~sgip~ 309 (361)
T cd05174 233 FGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCEQAYKILRRHGTLFLHLFALMKAAGLPE 309 (361)
T ss_pred hHHhhcCCcccCCCCCCCCCeeccHHHHHHHccCCCCCCchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCc
Confidence 999998754443 35899999999999999974322 369999999999999999999999999998654444
No 26
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=100.00 E-value=3.7e-43 Score=335.29 Aligned_cols=191 Identities=21% Similarity=0.375 Sum_probs=156.5
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||++|++. +.+|++.+|.|+|+++++|+||||+|+.|+++|..+|... ..+..
T Consensus 108 lQli~lmd~i~~~~----~ldL~l~pY~vl~tg~~~GlIE~V~ns~tl~~I~~~~~~~----------------~~~~~- 166 (353)
T cd05176 108 LQMIKIMDKIWLQE----GLDLRMVIFKCLSTGKDRGMVELVPASETLRKIQVEYGVT----------------GSFKD- 166 (353)
T ss_pred HHHHHHHHHHHHHC----CCCeEEEEEEEEEcCCCceEEEEeCCcHhHHHHHHHhCcC----------------Ccccc-
Confidence 79999999999865 5789999999999999999999999999999998754210 01100
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
..+..++....++++.|..+|.+|++|+|+||++||||||||||++||||+ .+|+++||||
T Consensus 167 ------------------~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsv~tYiLGIgDRHn~NILi~-~~Ghl~HIDF 227 (353)
T cd05176 167 ------------------KPLAEWLRKYNPAEEEYEKASENFIYSCAGCCVATYVLGICDRHNDNIMLR-STGHMFHIDF 227 (353)
T ss_pred ------------------chHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhhhccccCcCCcceEEc-CCCCEEEEee
Confidence 112222222235677899999999999999999999999999999999998 5999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCc----ccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGI----EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 231 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~----eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W 231 (372)
|++|+.++.... .||.||||||++|+++||.... ...|+..|+.++.+||+|.+.|++++++++.-.+.+.
T Consensus 228 G~ilg~~~~~g~~~~e~~PFkLT~emv~~mgG~~~~s~~f~~F~~lc~~af~~LRk~~~~il~L~~lM~~s~iP~~ 303 (353)
T cd05176 228 GKFLGHAQMFGSFKRDRAPFVLTSDMAYVINGGEKPTIRFQLFVDLCCQAYNLIRKHSNLFLNLLSLMTQSGLPEL 303 (353)
T ss_pred HHhcCCCccccCCCCCCCCeeecHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccc
Confidence 999998753332 4799999999999999984321 2369999999999999999999999999987666553
No 27
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=1.5e-41 Score=324.67 Aligned_cols=190 Identities=24% Similarity=0.442 Sum_probs=154.0
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||.+|++. +.+|++++|.|+|+++++|+||||+|+.|+++|...+.- . .+..|..
T Consensus 116 lQli~lmd~i~~~~----~ldL~l~pY~vl~tg~~~GlIE~V~ns~tl~~I~~~~~~-~-------------~~~~~~~- 176 (366)
T cd05175 116 LQIIRIMENIWQNQ----GLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGL-K-------------GALQFNS- 176 (366)
T ss_pred HHHHHHHHHHHHHC----CCCeEEEEEEEEEecCCceEEEEcCCchhHHHHHhcccc-c-------------cccccCc-
Confidence 69999999999875 589999999999999999999999999999998753210 0 0000110
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhc-CChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKS-RTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~-~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
..+. -|++. ...+.|..+|.+|++|||+||++||||||||||++||||+. +|+++|||
T Consensus 177 ------------------~~l~--~~l~~~~~~~~~~~a~~nF~~S~AgYsV~tYiLGIgDRHndNImi~~-~G~l~HID 235 (366)
T cd05175 177 ------------------HTLH--QWLKDKNKGEMYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKD-DGQLFHID 235 (366)
T ss_pred ------------------hhHH--HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccccCccceeEcC-CCCEEEEe
Confidence 0111 23332 23567889999999999999999999999999999999995 99999999
Q ss_pred ccchhhhhcCCC-CCCCCCCeeecHhhHHhhhccC-----c--ccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccc
Q 017397 160 FGDCFEASMNRE-KFPEKVPFRLTRMLVKAMEVSG-----I--EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLIN 230 (372)
Q Consensus 160 fg~~f~~~~~~l-~~pE~VPFRLT~ni~~~lg~~g-----~--eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~ 230 (372)
||++|+.++..+ ..||.||||||++|+..||..+ . .+.|+..|+.++.+||+|.+.|++++++++.--+.+
T Consensus 236 FG~iLg~~p~~~~~~~E~~PFkLT~emv~v~~gg~~~~~~s~~f~~F~~lc~~ay~~lRk~~~~ii~L~~lM~~sgiP~ 314 (366)
T cd05175 236 FGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPE 314 (366)
T ss_pred hHHhhcCCCccCCCCCCCCCeEecHHHHHHhccCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 999999876544 3589999999999999997432 2 258999999999999999999999999997544433
No 28
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not
Probab=100.00 E-value=1e-40 Score=318.62 Aligned_cols=189 Identities=20% Similarity=0.359 Sum_probs=154.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||++|++. +.+|++.+|.|+|+++++|+||||+|+.|+++|.+++.. ...+..
T Consensus 109 lQli~lmd~i~~~~----~ldl~l~pY~vl~tg~~~G~IE~V~ns~tl~~I~~~~g~----------------~g~~~~- 167 (354)
T cd00895 109 LQMIRIMNKIWVQE----GLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGV----------------TGSFKD- 167 (354)
T ss_pred HHHHHHHHHHHHHc----CCCceEEEEEEEecCCCceEEEEeCChhhHHHHHHHhCc----------------Cccccc-
Confidence 69999999999986 588999999999999999999999999999999865311 000100
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
..+..++....++++.|..++.||++|||+||++||||||||||++||||+. +|+++||||
T Consensus 168 ------------------~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsV~tYiLgIgDRHndNImi~~-~GhlfHIDF 228 (354)
T cd00895 168 ------------------RPLADWLQKHNPTEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKT-TGHMFHIDF 228 (354)
T ss_pred ------------------chHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHccccccCCCceeEcC-CCCEEEEee
Confidence 0122222222356788999999999999999999999999999999999995 999999999
Q ss_pred cchhhhhcCCC-CCCCCCCeeecHhhHHhhhccCcc----cchHHHHHHHHHHHhcCchHHHHHHHHHccCccc
Q 017397 161 GDCFEASMNRE-KFPEKVPFRLTRMLVKAMEVSGIE----GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLI 229 (372)
Q Consensus 161 g~~f~~~~~~l-~~pE~VPFRLT~ni~~~lg~~g~e----G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~ 229 (372)
|++|+..+... ..+|.+||+||++|+++||..|.+ ..|+..|+.++.+||+|.+.|++++++++.--+.
T Consensus 229 G~iLg~~~~~g~~~re~~PF~Lt~emv~vm~gg~~~S~~f~~F~~lc~~ay~~lRk~~~~il~L~~lM~~sgiP 302 (354)
T cd00895 229 GRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIP 302 (354)
T ss_pred HHhcCCCcccCCCCcCCCCccccHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCc
Confidence 99999764222 246999999999999999744432 3699999999999999999999999999854343
No 29
>KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=7.7e-32 Score=301.56 Aligned_cols=234 Identities=24% Similarity=0.349 Sum_probs=201.4
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhh-hcCCCC--
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYML-SFAPDY-- 77 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 77 (372)
+|+++++|..|.+++|++||++.+.++.+||+|++++|+|..|+..||++|+++||+..+...+.-...+. ..+..+
T Consensus 3243 lQL~r~lN~~l~~~~Et~rR~l~~~~p~~ipvs~q~rl~ed~ps~~tl~~I~~~~c~~~~~~~D~~i~~~~d~l~~~~~~ 3322 (3550)
T KOG0889|consen 3243 LQLFRMLNESLGKNKETRRRHLEFKLPIVIPVSSQMRLVEDKPSSITLQEIYEEYCARNNVSPDDPILLYFDRLAQAYSV 3322 (3550)
T ss_pred HHHHHHHHHHhccChhhhhhhcCccCceeeeccCceEEecCCcchhhHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHhh
Confidence 59999999999999999999999999999999999999999999999999999999988765433211110 000000
Q ss_pred ---CCcchHhHHHHHHHHHhccCCchHHHHHHhh-cCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCC
Q 017397 78 ---DHLPLIAKVEVFEYALQNTEGNDLARVLWLK-SRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSG 153 (372)
Q Consensus 78 ---~~~~~~~k~~~f~~~~~~~~~~~l~~~~~~~-~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG 153 (372)
..-....|.++|+.+.....+..+.+.++.+ ..++..++..|++|+.++|..++++|++.++.|.|+.+++.+.||
T Consensus 3323 ~~~~~~~~~lr~~i~e~i~~~~vp~sil~dy~~~tf~~~~d~w~frk~f~~qla~~~~~~~~lni~~~~p~k~~~~~dsG 3402 (3550)
T KOG0889|consen 3323 LIGLTAAHQLRGQIFEDIQKTMVPRSILKDYFYKTFTNYSDFWTFRKQFTDQLAVFSFMEYMLNINGRGPAKLTFAKDSG 3402 (3550)
T ss_pred ccCchHHHHHHHHHHHHHHHhhCcHHHHHHHHHHhcCChhhhhhhHhHHHHHHHHHHHHHHHHhcCCCCccceeeeeccc
Confidence 0111345788999999888888777766665 477888888888999999999999999999999999999999999
Q ss_pred eEEEEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccccc
Q 017397 154 KILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 233 (372)
Q Consensus 154 ~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~ 233 (372)
.+...||-+...+......+.|.||||||||++.++|..|+||.+..+|.++.+||-++.+.+-.++..|+||+++.|..
T Consensus 3403 ~v~~~~~~~~~~~~~~~~~~~~~VpFRlTpni~~~i~~~~veg~l~~s~~a~ar~l~~p~~~l~~~l~~~~RDE~~~w~~ 3482 (3550)
T KOG0889|consen 3403 KVFNTDFLPSYISSKPIFHNNEPVPFRLTPNIQEFIGDFGVEGLLAGSMMAIARCLIEPDFELDPYLQLFFRDEIISWFK 3482 (3550)
T ss_pred cccchhhccCcccCccccccCCcCCeeecCCchhhhcchhhhhhhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHhh
Confidence 99999999998655555667899999999999999999999999999999999999999999999999999999999986
Q ss_pred c
Q 017397 234 F 234 (372)
Q Consensus 234 ~ 234 (372)
.
T Consensus 3483 ~ 3483 (3550)
T KOG0889|consen 3483 Q 3483 (3550)
T ss_pred c
Confidence 4
No 30
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=271.35 Aligned_cols=191 Identities=24% Similarity=0.461 Sum_probs=155.1
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
+|++++|..|++.. +.++++.+|.|+|++...||||.|+++.|+.+|-..-.. ...+..++
T Consensus 826 LQmLriMd~iWk~~----glDlrm~PYgcls~Gd~iGlIEVV~~s~TIa~IQ~~~g~-------------~~at~afn-- 886 (1076)
T KOG0904|consen 826 LQMLRIMDNIWKTE----GLDLRMLPYGCLSTGDRIGLIEVVRNSETIANIQLNTGN-------------MAATAAFN-- 886 (1076)
T ss_pred HHHHHHHHHHHHhc----CCCeeccccccccccceeeeEEEecCchhhhhhhhcccc-------------ceeeccCC--
Confidence 59999999998765 589999999999999999999999999999887642110 00111111
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCCh-H-HHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEE
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTS-E-IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHI 158 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~-~-~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hI 158 (372)
++.+ .-|++..+| + .+=.+-..||.|||+||+++|||||||||.+|||+.. ||++|||
T Consensus 887 -----------------~~~L--~~WLKekNp~e~kld~AIe~Ft~SCAGYcVATyVLGIgDRHsDNIMvke-~GqlFHI 946 (1076)
T KOG0904|consen 887 -----------------KDAL--LNWLKEKNPGEDKLDAAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVKE-TGQLFHI 946 (1076)
T ss_pred -----------------HHHH--HHHHhhcCchHHHHHHHHHHHHHhhccceeeeeeecccccccCceEEec-cCcEEEE
Confidence 0111 236665443 3 3667889999999999999999999999999999986 9999999
Q ss_pred eccchhhhhcCCCCC-CCCCCeeecHhhHHhhhccCc------ccchHHHHHHHHHHHhcCchHHHHHHHHHccCcccc
Q 017397 159 DFGDCFEASMNREKF-PEKVPFRLTRMLVKAMEVSGI------EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLIN 230 (372)
Q Consensus 159 Dfg~~f~~~~~~l~~-pE~VPFRLT~ni~~~lg~~g~------eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~ 230 (372)
|||+++|..+.++.+ .|+|||-||++++.+|+..+. .+.|+..|+.++.+||+|.+.+++++..++--.|.+
T Consensus 947 DFGHiLGh~KsKlGi~RERvPFvLT~dFl~VI~~G~~~~~~~eF~kFq~~C~~AYl~lr~H~nLfi~LFsmMl~~glPE 1025 (1076)
T KOG0904|consen 947 DFGHILGHFKSKLGINRERVPFVLTYDFLHVIQKGKTKNSEKEFQKFQELCEKAYLALRRHGNLFISLFSMMLGTGLPE 1025 (1076)
T ss_pred EhhhhhccchhhcCcccccCceEeecceeeeecccCCCCchhHHHHHHHHHHHHHHHHHHccccHHHHHHHHHhcCCCc
Confidence 999999998877764 699999999999999985443 257999999999999999999999999998765543
No 31
>KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=4.3e-30 Score=257.37 Aligned_cols=175 Identities=28% Similarity=0.485 Sum_probs=152.4
Q ss_pred cHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCcc
Q 017397 2 QLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHLP 81 (372)
Q Consensus 2 Qlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (372)
||+..|-.++... +-.|+|++|.|+-+|.+.||||.|.|+.|+|+|-+.+.+.
T Consensus 606 Qli~~f~~IW~Ee----gvplWlRpykIlvtss~sGLIEtI~da~SIHsIKk~l~~~----------------------- 658 (847)
T KOG0903|consen 606 QLISAFKDIWQEE----GVPLWLRPYKILVTSSDSGLIETIVDAMSIHSIKKRLPNL----------------------- 658 (847)
T ss_pred HHHHHHHHHHHHc----CCcceeeeEEEEEEecCccceeeccchhhHHHHHHhcchh-----------------------
Confidence 7777777777765 4679999999999999999999999999999998865210
Q ss_pred hHhHHHHHHHHHhccCCchHHHHHHhh--cCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEe
Q 017397 82 LIAKVEVFEYALQNTEGNDLARVLWLK--SRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHID 159 (372)
Q Consensus 82 ~~~k~~~f~~~~~~~~~~~l~~~~~~~--~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hID 159 (372)
..++ +++.. ..+++.|..+.+||+.|+|+||++||+|.+.|||++|||||. .|+|+|||
T Consensus 659 --~~l~----------------~F~~~~g~~NS~~yk~AQrNFvqSlagYSLvcYlLQvKDRHNGNILiD~-EGHIIHID 719 (847)
T KOG0903|consen 659 --ASLR----------------HFFAAFGKPNSEKYKSAQRNFVQSLAGYSLVCYLLQVKDRHNGNILIDE-EGHIIHID 719 (847)
T ss_pred --hhHH----------------HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCceEecC-CCCEEEEe
Confidence 0111 22222 357889999999999999999999999999999999999996 99999999
Q ss_pred ccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCccc----chHHHHHHHHHHHhcCchHHHHHHHHHcc
Q 017397 160 FGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEG----NFRSTCENVMQVLRSNRDSVMAMMEAFVH 225 (372)
Q Consensus 160 fg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG----~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~ 225 (372)
|||++...++.+.| |..||.||.+++++|| |++| -|+..|.+.+.++|+|.+.|..+.|++-.
T Consensus 720 FGFmLsnsPgnvgF-EsAPFKLT~EylEvmg--G~~~d~FdyfK~L~l~gf~a~RKhadrIv~lvEiMq~ 786 (847)
T KOG0903|consen 720 FGFMLSNSPGNVGF-ESAPFKLTTEYLEVMG--GLDSDMFDYFKSLMLQGFMALRKHADRIVLLVEIMQD 786 (847)
T ss_pred eeeEecCCCCCccc-ccCchhhHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999888777 9999999999999999 7776 67899999999999999999999999965
No 32
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.1e-29 Score=256.01 Aligned_cols=191 Identities=21% Similarity=0.354 Sum_probs=160.6
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
||++++||+++.+. +.+|++.+|+++|++-+.|++|.|+++.||..|-.++.- .|
T Consensus 1102 lQmI~iMdkIWl~e----gLDlrMViFrc~stG~~rgMvElVp~a~TLrKIQve~Gl-tG-------------------- 1156 (1639)
T KOG0905|consen 1102 LQMIRIMDKIWLQE----GLDLRMVIFRCLSTGYDRGMVELVPNAETLRKIQVEEGL-TG-------------------- 1156 (1639)
T ss_pred HHHHHHHHHHHHhc----CCceeEEEEEeecccccccceeecccHHHHHHHHHHhcc-cc--------------------
Confidence 69999999999876 489999999999999999999999999999998876421 00
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
......+.+++....++..+|-.+..||+.|||+||+++|||||+|||++|||+.+ ||++|||||
T Consensus 1157 --------------sfkD~pla~WL~KhNp~e~eYekA~eNFiySCAG~cVaTYVLGIcDRHNDNIMl~~-sGHmFHIDF 1221 (1639)
T KOG0905|consen 1157 --------------SFKDRPLAKWLMKHNPSEFEYEKAVENFIYSCAGWCVATYVLGICDRHNDNIMLTK-SGHMFHIDF 1221 (1639)
T ss_pred --------------ccccchHHHHHHhcCCCHHHHHHHHHHHHHhcccceeeeEeeecccccCCceEEec-cCcEEEEeh
Confidence 11122355555555677889999999999999999999999999999999999986 999999999
Q ss_pred cchhhhhcCCCC-CCCCCCeeecHhhHHhhhccCc----ccchHHHHHHHHHHHhcCchHHHHHHHHHccCccccc
Q 017397 161 GDCFEASMNREK-FPEKVPFRLTRMLVKAMEVSGI----EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 231 (372)
Q Consensus 161 g~~f~~~~~~l~-~pE~VPFRLT~ni~~~lg~~g~----eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W 231 (372)
|-.+|.+.-.-. ..+++||-+|.+|..++...+. ...|...|+.++..+|+|.++|+++|+.++.-.+..-
T Consensus 1222 GKFLGhaQMfg~fKRDRaPFVfTSdMayvINgG~kpt~~fq~FVDlCCrAyNiiRK~t~lllnlL~lM~~agiPel 1297 (1639)
T KOG0905|consen 1222 GKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKNTNLLLNLLRLMACAGIPEL 1297 (1639)
T ss_pred hhhcchHHHhcccccccCCeEEeccchhhhcCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCc
Confidence 999987632211 3589999999999999985554 3589999999999999999999999999998766543
No 33
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=6.1e-29 Score=245.14 Aligned_cols=180 Identities=28% Similarity=0.509 Sum_probs=144.2
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
.|++++||.+|++.. .+|.+.+|+|+|+++.-|++|+|++ .+|..|..+|....... ....|+-.
T Consensus 605 ~Qii~lMd~LLkken----lDLkLtpYkVLatg~~eG~vefI~s-~~la~Ils~~~~I~~yl--------ke~~p~e~-- 669 (843)
T KOG0906|consen 605 LQIIRLMDRLLKKEN----LDLKLTPYKVLATGPKEGFVEFIPS-KPLARILSEYHSILMYL--------KEDRPDEN-- 669 (843)
T ss_pred HHHHHHHHHHhcccc----ccccceeeEEeccCCCcccEEeecC-CcHHHHHHHHHHHHHHH--------HhhCCCcC--
Confidence 489999999999864 8899999999999999999999998 89999998875422110 00111100
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
.+... =.+.+.+|++|||+||+++||||+||||++|+|+++ +|++|||||
T Consensus 670 ----------------------------ap~gi-~~~v~dnfVkScaGYsVitYILGvGDRhldNLllT~-dGk~FHiDF 719 (843)
T KOG0906|consen 670 ----------------------------APFGI-SPEVMDNFVKSCAGYSVITYILGVGDRHLDNLLLTK-DGKLFHIDF 719 (843)
T ss_pred ----------------------------CCCCC-ChhHHHHHHHhhccceeeeeeecccCCCcCceEEcc-CCcEEEEee
Confidence 00000 113568999999999999999999999999999997 999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhhccCc--ccchHHHHHHHHHHHhcCchHHHHHHHHHccCccc
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGI--EGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLI 229 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~--eG~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~ 229 (372)
|++||..+ .|-..|..|++.|+++||.... .-.|++.|..++..||++.+.|+++.++++..-+.
T Consensus 720 gyIlGRDP----KP~pp~MkL~kemve~mgg~es~~Yq~F~s~c~~Af~~LRRssnlIlnLf~LM~~~~IP 786 (843)
T KOG0906|consen 720 GYILGRDP----KPFPPPMKLAKEMVEGMGGAESKQYQEFRSYCYEAFLILRRSSNLILNLFSLMADANIP 786 (843)
T ss_pred eeeccCCC----CCCCCccccCHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCC
Confidence 99998764 3445789999999999994433 24899999999999999999999999999865443
No 34
>KOG0902 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-28 Score=255.39 Aligned_cols=185 Identities=31% Similarity=0.503 Sum_probs=158.3
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
+|++.++..+++. .+.++.+.+|+|+|++|.||+||.+||+.|-+++.++-- .
T Consensus 1563 LQiislf~~if~~----~gLd~~lfPYrV~aT~pGcGVIEviPn~~SRdqlGr~t~--~--------------------- 1615 (1803)
T KOG0902|consen 1563 LQIISLFKNIFQL----VGLDLYLFPYRVVATAPGCGVIEVIPNSKSRDQLGRETD--N--------------------- 1615 (1803)
T ss_pred HHHHHHHHHHHHH----cCCceEEeeeeeeccCCCCceEEeCCCCccHHHhccccc--c---------------------
Confidence 4888888888865 468999999999999999999999999999888776410 0
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
...|+|+.-. ...+++.|.++|.||++|+|+||+++|+|.+.|||++|||||. -|+++||||
T Consensus 1616 ---glyeyF~~~~--------------G~~~s~~fq~Ar~NF~~S~A~Ysv~s~lLq~KDRHNGNim~Dd-~G~~iHIDF 1677 (1803)
T KOG0902|consen 1616 ---GLYEYFTRKY--------------GDESSEAFQTARYNFVRSMAGYSVLSYLLQIKDRHNGNIMIDD-QGHIIHIDF 1677 (1803)
T ss_pred ---cHHHHHHHhc--------------CccchHHHHHHHHHHHHHHHHHHHHHHHcccccccCCceeEcc-CCCEEEEee
Confidence 1234443311 1246889999999999999999999999999999999999996 999999999
Q ss_pred cchhhhhcCC-CCCCCCCCeeecHhhHHhhhccCcc-----cchHHHHHHHHHHHhcCchHHHHHHHHHccCcccccccc
Q 017397 161 GDCFEASMNR-EKFPEKVPFRLTRMLVKAMEVSGIE-----GNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLF 234 (372)
Q Consensus 161 g~~f~~~~~~-l~~pE~VPFRLT~ni~~~lg~~g~e-----G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~Dpl~~W~~~ 234 (372)
|++|+.+++. +.+ |. ||+||.+|+..|| |+. ..|...|+.++-+.|.+.+.|.+.++.|+.-.|.|++..
T Consensus 1678 Gf~~e~sPGgnl~f-E~-~fKLt~Em~~~mg--G~~~~~~f~~f~elcVk~yLA~R~~~~~iv~~V~~mldsgLPCfrg~ 1753 (1803)
T KOG0902|consen 1678 GFMFESSPGGNLGF-EP-PFKLTKEMVMLMG--GKMEAKPFKWFQELCVKGYLAARPYMDAIVSLVQSMLDSGLPCFRGQ 1753 (1803)
T ss_pred eeEEecCCCCccCc-CC-CccchHHHHHHhC--CCCCCCcHHHHHHHHHHHHHhhchhHHHHHHHHHHHHhcCCCccCcc
Confidence 9999998877 555 77 9999999999999 443 378899999999999999999999999999999998653
No 35
>PTZ00303 phosphatidylinositol kinase; Provisional
Probab=99.88 E-value=1.4e-22 Score=202.87 Aligned_cols=132 Identities=27% Similarity=0.392 Sum_probs=102.4
Q ss_pred CcHhHHHHHHHccCcccCCCCeeeeeceeeecCCCceEEEEcCCchhHHHHHHHHHHhhhhhhhHHHHHhhhcCCCCCCc
Q 017397 1 MQLFGLVNTLLENSRNTSEKDLSIQRYSVIPLSPNSGLIEWVPNCDTLHYLIREYRDARKITLNQEHKYMLSFAPDYDHL 80 (372)
Q Consensus 1 mQlf~l~N~lL~~~~~t~~r~L~i~~y~Vipls~~~gLIE~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
+|++++|+.||++.. .+|.+.+|.|++++++.|+||.|++ .+|.+|.+.. +
T Consensus 1068 LQmIrLMDrLLKkEn----LDLKLTPYRVLATG~dsGLIEfVps-~tLAsI~~~~--------------I---------- 1118 (1374)
T PTZ00303 1068 CISSRLLQMLLSSEI----GNAEMLDYSVLPLSCDSGLIEKAEG-RELSNLDNMD--------------I---------- 1118 (1374)
T ss_pred HHHHHHHHHHHHhcC----CCccccceEEEeccCCcccEEEecc-hHHHHhhhhH--------------H----------
Confidence 499999999999874 7899999999999999999999998 4676664310 0
Q ss_pred chHhHHHHHHHHHhccCCchHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEec
Q 017397 81 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDF 160 (372)
Q Consensus 81 ~~~~k~~~f~~~~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDf 160 (372)
.+.|. ...+. ...||++|+|.||+++|||||||||++||||+. +|+++||||
T Consensus 1119 -----l~YLr------------------~~~t~----~~~NFi~S~AGYsViTYILgIgDRHngNILId~-dGhLfHIDF 1170 (1374)
T PTZ00303 1119 -----ASYVL------------------YRGTR----SCINFLASAKLFLLLNYIFSIGDRHKGNVLIGT-NGALLHIDF 1170 (1374)
T ss_pred -----HHHHH------------------hcCcH----HHHHHHHHHHHHHHHHHHhccCcccCCceeEcC-CCCEEEEec
Confidence 00011 00111 246899999999999999999999999999996 999999999
Q ss_pred cchhhhhcCCCCCCCCCCeeecHhhHHhhh
Q 017397 161 GDCFEASMNREKFPEKVPFRLTRMLVKAME 190 (372)
Q Consensus 161 g~~f~~~~~~l~~pE~VPFRLT~ni~~~lg 190 (372)
|++|+... ....+-.-|-|+-..|..+++
T Consensus 1171 GFILg~rt-fkeKl~~s~vR~D~~l~eav~ 1199 (1374)
T PTZ00303 1171 RFIFSEKT-FVEKLARSTVRIDDAFLAAVE 1199 (1374)
T ss_pred ceeecCch-hhhccCCCceehhHHHHHHHH
Confidence 99998753 222234567888888777665
No 36
>PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases. Members of the family of PIK-related kinases may act as intracellular sensors that govern radial and horizontal pathways [].; GO: 0005515 protein binding; PDB: 2KIT_A 1W1N_A 2KIO_A.
Probab=99.72 E-value=1.1e-18 Score=109.32 Aligned_cols=32 Identities=53% Similarity=0.993 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHhhCcchhhhhcccccCCC
Q 017397 341 GLSVKLQVQKLIIQATSHENLCQNYVGWCPFW 372 (372)
Q Consensus 341 ~lsv~~qV~~LI~~Atd~~nL~~m~~GW~Pw~ 372 (372)
+|||++||++||++|||++|||+||+||+|||
T Consensus 2 ~lsv~~qV~~LI~~At~~~nLa~my~GW~pw~ 33 (33)
T PF02260_consen 2 PLSVEQQVDELISEATDPENLARMYIGWMPWW 33 (33)
T ss_dssp -S-STHHHHHHHHHHHHHHHHHHHCTSS-TT-
T ss_pred CCCHHHHHHHHHHHHcCHHHHHHHhcchhccC
Confidence 58999999999999999999999999999998
No 37
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=89.11 E-value=0.27 Score=46.55 Aligned_cols=43 Identities=33% Similarity=0.521 Sum_probs=32.4
Q ss_pred HHHHHhHHH------HHHHHHHhcc----CCCCCCceEEEecCCeEEEEeccch
Q 017397 120 TNYTRSLAV------MSMVGYLLGL----GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 120 ~~F~~SlA~------~Si~~yilgl----gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.+|..+.|- .+.+.|+=+. -|-.|+|||||+ +|.+=-+|||++
T Consensus 139 ~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~-~G~iKitDFGFA 191 (355)
T KOG0616|consen 139 GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ-NGHIKITDFGFA 191 (355)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc-CCcEEEEeccce
Confidence 356665553 4556666443 488899999997 999999999987
No 38
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=85.92 E-value=0.51 Score=41.90 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=27.1
Q ss_pred HHHHHHHh---cc--CCCCCCceEEEecCCeEEEEeccchh
Q 017397 129 MSMVGYLL---GL--GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 129 ~Si~~yil---gl--gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
...+.|++ |+ +|=+|+|||++ +|++.=||||.+-
T Consensus 127 ~~~L~~l~H~~giiHrDlkP~NIli~--~~~v~LiDFG~a~ 165 (190)
T cd05147 127 IQIMRILYQDCRLVHADLSEYNLLYH--DGKLYIIDVSQSV 165 (190)
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEE--CCcEEEEEccccc
Confidence 34555553 55 89999999998 5999999999874
No 39
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=85.83 E-value=4.2 Score=45.25 Aligned_cols=112 Identities=26% Similarity=0.446 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHH--hHHHHHH--HHHHhccCCCCCCceEEEecCCeEEEEeccchhhhh---cCCCCCCCCCCeeecH
Q 017397 111 TSEIWLERRTNYTR--SLAVMSM--VGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEAS---MNREKFPEKVPFRLTR 183 (372)
Q Consensus 111 ~~~~w~~~r~~F~~--SlA~~Si--~~yilglgDRH~~NIli~~~tG~v~hIDfg~~f~~~---~~~l~~pE~VPFRLT~ 183 (372)
-|++|-.+ |+. -+|+-|+ +|||= -|--|+|||||+ .|+|=--|||-|+--. .-.-.++=-.|==+.|
T Consensus 172 ~pE~~ArF---Y~aEiVlAldslH~mgyVH--RDiKPDNvLld~-~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISP 245 (1317)
T KOG0612|consen 172 LPEDWARF---YTAEIVLALDSLHSMGYVH--RDIKPDNVLLDK-SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISP 245 (1317)
T ss_pred ChHHHHHH---HHHHHHHHHHHHHhcccee--ccCCcceeEecc-cCcEeeccchhHHhcCCCCcEEeccccCCCCccCH
Confidence 57777544 333 3444444 34442 477899999997 9999999999998432 1111122234556889
Q ss_pred hhHHhhhcc-Cccc--------------------ch-HHHHHHHHHHHhcCchH------------HHHHHHHHccCcc
Q 017397 184 MLVKAMEVS-GIEG--------------------NF-RSTCENVMQVLRSNRDS------------VMAMMEAFVHDPL 228 (372)
Q Consensus 184 ni~~~lg~~-g~eG--------------------~F-~~~~~~~~~~Lr~~~~~------------l~~~l~~f~~Dpl 228 (372)
++...+|.. |..| +| ..+.+.|+.-+..|++. .-++++.|+-+|-
T Consensus 246 EvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~~e 324 (1317)
T KOG0612|consen 246 EVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCDRE 324 (1317)
T ss_pred HHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcChh
Confidence 999999876 4443 33 45777888888888553 3567777776664
No 40
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=85.80 E-value=0.59 Score=41.28 Aligned_cols=24 Identities=33% Similarity=0.530 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|=||+|||++ +|++.=||||.+-
T Consensus 142 rDlkP~NIll~--~~~~~liDFG~a~ 165 (190)
T cd05145 142 GDLSEYNILYH--DGKPYIIDVSQAV 165 (190)
T ss_pred CCCChhhEEEE--CCCEEEEEcccce
Confidence 79999999998 8999999999873
No 41
>TIGR03843 conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.
Probab=84.74 E-value=0.67 Score=42.62 Aligned_cols=45 Identities=22% Similarity=0.428 Sum_probs=40.1
Q ss_pred HHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEeccchhhhh
Q 017397 122 YTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEAS 167 (372)
Q Consensus 122 F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDfg~~f~~~ 167 (372)
.--++.-++++=+++.=.|||.+|||..+ +|+++-||=|.||...
T Consensus 131 d~~~l~riaVfDi~inNaDRk~GhiL~~~-dg~l~~IDHGl~f~~~ 175 (253)
T TIGR03843 131 DHPQLRRMAVFDALVNNADRKGGHVLPGP-DGRVWGVDHGVCFHVE 175 (253)
T ss_pred ccHHHhhhhhheeeeecCCCCCCcEeEcC-CCcEEEecCceecCCC
Confidence 34567788999999999999999999987 9999999999999763
No 42
>KOG3365 consensus NADH:ubiquinone oxidoreductase, NDUFA5/B13 subunit [Energy production and conversion]
Probab=84.51 E-value=0.66 Score=38.53 Aligned_cols=26 Identities=27% Similarity=0.510 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhCcchhhhhcccccCC
Q 017397 346 LQVQKLIIQATSHENLCQNYVGWCPF 371 (372)
Q Consensus 346 ~qV~~LI~~Atd~~nL~~m~~GW~Pw 371 (372)
+||+++|.||-+.-++.+|-..|.||
T Consensus 104 GqIEE~i~qa~~el~m~~k~~~wk~w 129 (145)
T KOG3365|consen 104 GQIEEVIEQAEAELNMGRKMFEWKPW 129 (145)
T ss_pred CchHHHHHHHHHHHHHHhhhhccccc
Confidence 78999999999999999999999999
No 43
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=83.95 E-value=1.9 Score=37.83 Aligned_cols=40 Identities=28% Similarity=0.373 Sum_probs=28.0
Q ss_pred HHHhHHHHHHHHHHhcc--CCCCCCceEEEecCCeEEEEeccch
Q 017397 122 YTRSLAVMSMVGYLLGL--GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 122 F~~SlA~~Si~~yilgl--gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+..+++..-..-+-.|+ ||-||+|||++ .|++.-||||.+
T Consensus 95 ~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~--~~~~~liDfg~a 136 (199)
T TIGR03724 95 LLREIGRLVGKLHKAGIVHGDLTTSNIIVR--DDKLYLIDFGLG 136 (199)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCcceEEEE--CCcEEEEECCCC
Confidence 44444433333333454 79999999998 799999999865
No 44
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=82.66 E-value=1.2 Score=37.89 Aligned_cols=25 Identities=28% Similarity=0.498 Sum_probs=22.0
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccch
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-=||=||+|||++ .|++.-|||+.+
T Consensus 110 ~HgD~~~~Nil~~--~~~~~liDf~~a 134 (170)
T cd05151 110 CHNDLLPGNFLLD--DGRLWLIDWEYA 134 (170)
T ss_pred ecCCCCcCcEEEE--CCeEEEEecccc
Confidence 3399999999998 688999999876
No 45
>PRK14879 serine/threonine protein kinase; Provisional
Probab=81.11 E-value=3.5 Score=36.45 Aligned_cols=23 Identities=52% Similarity=0.798 Sum_probs=21.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
||-+|+|||++ .|.+.-||||.+
T Consensus 119 ~Dl~p~Nil~~--~~~~~liDf~~a 141 (211)
T PRK14879 119 GDLTTSNMILS--GGKIYLIDFGLA 141 (211)
T ss_pred CCCCcccEEEE--CCCEEEEECCcc
Confidence 79999999998 799999999865
No 46
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=80.98 E-value=1.5 Score=45.80 Aligned_cols=35 Identities=31% Similarity=0.633 Sum_probs=27.6
Q ss_pred HHHHHHHhccC----CCCCCceEEEecCCeEEEEeccchh
Q 017397 129 MSMVGYLLGLG----DRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 129 ~Si~~yilglg----DRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
.|.+.||-.+| |-.|+|||||+ +|+|--.|||.|=
T Consensus 739 tcAiesVHkmGFIHRDiKPDNILIDr-dGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 739 TCAIESVHKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 777 (1034)
T ss_pred HHHHHHHHhccceecccCccceEEcc-CCceeeeeccccc
Confidence 35555554444 77899999997 9999999999993
No 47
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=80.20 E-value=1.2 Score=45.95 Aligned_cols=25 Identities=36% Similarity=0.787 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
=+|=||+||+++. .|+++-+|||.+
T Consensus 288 HaDpHpGNi~v~~-~g~i~~lDfGi~ 312 (517)
T COG0661 288 HADPHPGNILVRS-DGRIVLLDFGIV 312 (517)
T ss_pred ccCCCccceEEec-CCcEEEEcCcce
Confidence 3799999999997 799999999987
No 48
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=78.52 E-value=1.5 Score=40.48 Aligned_cols=23 Identities=30% Similarity=0.625 Sum_probs=20.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
||=||+||+++. .| +.-||||..
T Consensus 159 ~Dikp~Nili~~-~g-i~liDfg~~ 181 (232)
T PRK10359 159 GDPHKGNFIVSK-NG-LRIIDLSGK 181 (232)
T ss_pred CCCChHHEEEeC-CC-EEEEECCCc
Confidence 899999999986 77 999999755
No 49
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=78.34 E-value=1.4 Score=45.80 Aligned_cols=24 Identities=29% Similarity=0.635 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCC----eEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSG----KILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG----~v~hIDfg~~ 163 (372)
+|=||+||+++. +| +++-+|||.+
T Consensus 284 aDpHPGNIlv~~-~g~~~~~i~llDFGiv 311 (537)
T PRK04750 284 ADMHPGNIFVSY-DPPENPRYIALDFGIV 311 (537)
T ss_pred CCCChHHeEEec-CCCCCCeEEEEecceE
Confidence 899999999986 66 9999999987
No 50
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=78.06 E-value=3.4 Score=41.76 Aligned_cols=24 Identities=42% Similarity=0.852 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|=||+||+++. +|++.-+|||.+
T Consensus 281 ~D~hPgNilv~~-~g~i~liDfG~~ 304 (437)
T TIGR01982 281 ADLHPGNIFVLK-DGKIIALDFGIV 304 (437)
T ss_pred CCCCcccEEECC-CCcEEEEeCCCe
Confidence 599999999975 899999999976
No 51
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=76.27 E-value=2.1 Score=37.05 Aligned_cols=25 Identities=28% Similarity=0.482 Sum_probs=22.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=+|=||+||+++ +|.+.=||||.+-
T Consensus 138 H~Dl~p~Nili~--~~~~~liDfg~a~ 162 (187)
T cd05119 138 HGDLSEYNILVD--DGKVYIIDVPQAV 162 (187)
T ss_pred cCCCChhhEEEE--CCcEEEEECcccc
Confidence 468899999999 8999999999874
No 52
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=76.19 E-value=2.3 Score=40.02 Aligned_cols=47 Identities=30% Similarity=0.431 Sum_probs=32.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh------hhhcCCCCCCCCCCeeecHhhH
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF------EASMNREKFPEKVPFRLTRMLV 186 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f------~~~~~~l~~pE~VPFRLT~ni~ 186 (372)
-|-.|+|||+|+ +|.|=--|||.|= .+...--=.|=..|=|++|+=-
T Consensus 192 RDvKPSNILldr-~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~ 244 (361)
T KOG1006|consen 192 RDVKPSNILLDR-HGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDK 244 (361)
T ss_pred ccCChhheEEec-CCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccC
Confidence 477899999997 9999999999982 1111000135567778888743
No 53
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=75.83 E-value=2.2 Score=37.70 Aligned_cols=28 Identities=25% Similarity=0.374 Sum_probs=24.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
=||=+|+||+++. +|++.=+|||.+...
T Consensus 148 H~Dl~p~Nill~~-~~~~~liDfg~~~~~ 175 (198)
T cd05144 148 HGDLSEFNILVDD-DEKIYIIDWPQMVST 175 (198)
T ss_pred cCCCCcccEEEcC-CCcEEEEECCccccC
Confidence 3588999999996 999999999998644
No 54
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=73.70 E-value=2.2 Score=37.89 Aligned_cols=32 Identities=38% Similarity=0.581 Sum_probs=22.5
Q ss_pred HHHHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 132 VGYLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 132 ~~yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
..+.+-=||=||+|||++...|+|.-|||+.+
T Consensus 164 ~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a 195 (239)
T PF01636_consen 164 LPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA 195 (239)
T ss_dssp SCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred CCcEEEEeccccccceeeeccceeEEEecccc
Confidence 45667789999999999966788879999775
No 55
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=72.46 E-value=2.1 Score=41.57 Aligned_cols=25 Identities=40% Similarity=0.712 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
.|--|+|||+|. .|+|.-.|||.|=
T Consensus 149 RDlKPENILLd~-~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 149 RDLKPENILLDE-QGHIKLTDFGLCK 173 (357)
T ss_pred ccCCHHHeeecC-CCcEEEeccccch
Confidence 477899999996 9999999999884
No 56
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=70.48 E-value=4.7 Score=41.41 Aligned_cols=34 Identities=35% Similarity=0.696 Sum_probs=28.0
Q ss_pred HHHHHHHhccC----CCCCCceEEEecCCeEEEEeccch
Q 017397 129 MSMVGYLLGLG----DRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 129 ~Si~~yilglg----DRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.+.+-|+=+.| |--|+|||||. +|++.-.|||-+
T Consensus 184 ldAleylH~~GIIHRDlKPENILLd~-dmhikITDFGsA 221 (604)
T KOG0592|consen 184 LDALEYLHSNGIIHRDLKPENILLDK-DGHIKITDFGSA 221 (604)
T ss_pred HHHHHHHHhcCceeccCChhheeEcC-CCcEEEeecccc
Confidence 45677776555 66799999997 999999999976
No 57
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=70.40 E-value=3.4 Score=38.05 Aligned_cols=25 Identities=32% Similarity=0.501 Sum_probs=21.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
=+|-+|+|||++. +|++.=||||.+
T Consensus 165 HrDlkp~NILv~~-~~~v~LIDfg~~ 189 (239)
T PRK01723 165 HADLNAHNILLDP-DGKFWLIDFDRG 189 (239)
T ss_pred CCCCCchhEEEcC-CCCEEEEECCCc
Confidence 3699999999986 789999999866
No 58
>smart00090 RIO RIO-like kinase.
Probab=69.85 E-value=3.6 Score=37.90 Aligned_cols=40 Identities=28% Similarity=0.467 Sum_probs=29.4
Q ss_pred HHHhHHHHHHHHHHh--c---cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 122 YTRSLAVMSMVGYLL--G---LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 122 F~~SlA~~Si~~yil--g---lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
++.+++ ..+.|+- | =+|=+|+||+++ +|++.=||||.+..
T Consensus 153 i~~qi~--~~l~~LH~~g~iiH~Dikp~NIli~--~~~i~LiDFg~a~~ 197 (237)
T smart00090 153 LYDDIL--EEMRKLYKEGELVHGDLSEYNILVH--DGKVVIIDVSQSVE 197 (237)
T ss_pred HHHHHH--HHHHHHHhcCCEEeCCCChhhEEEE--CCCEEEEEChhhhc
Confidence 444443 5566653 3 369999999998 89999999997753
No 59
>PRK12274 serine/threonine protein kinase; Provisional
Probab=69.14 E-value=3.9 Score=37.26 Aligned_cols=28 Identities=25% Similarity=0.394 Sum_probs=23.2
Q ss_pred hcc--CCC-CCCceEEEecCCeEEEEeccchh
Q 017397 136 LGL--GDR-HPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 136 lgl--gDR-H~~NIli~~~tG~v~hIDfg~~f 164 (372)
.|+ +|- .|+|||++. .|++.=||||.+-
T Consensus 110 ~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~ 140 (218)
T PRK12274 110 CGVAHNDLAKEANWLVQE-DGSPAVIDFQLAV 140 (218)
T ss_pred CcCccCCCCCcceEEEcC-CCCEEEEECCCce
Confidence 355 787 589999985 8999999999874
No 60
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=68.39 E-value=3.9 Score=38.67 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=27.8
Q ss_pred HHHHhccCCCCCCceEEEec---CCeEEEEeccch
Q 017397 132 VGYLLGLGDRHPSNLMLHRY---SGKILHIDFGDC 163 (372)
Q Consensus 132 ~~yilglgDRH~~NIli~~~---tG~v~hIDfg~~ 163 (372)
..++|-=||-|++|||++.. +|.+.-|||.++
T Consensus 177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya 211 (302)
T cd05156 177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA 211 (302)
T ss_pred CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence 56788889999999999964 589999999877
No 61
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=66.12 E-value=5.7 Score=36.44 Aligned_cols=24 Identities=33% Similarity=0.475 Sum_probs=20.3
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccc
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGD 162 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~ 162 (372)
-=||=||+|++++ .|.+.-|||+.
T Consensus 157 ~HGD~hpgNFlv~--~~~i~iID~~~ 180 (229)
T PF06176_consen 157 YHGDPHPGNFLVS--NNGIRIIDTQG 180 (229)
T ss_pred ccCCCCcCcEEEE--CCcEEEEECcc
Confidence 4599999999998 57799999953
No 62
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=65.41 E-value=6.1 Score=31.87 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||=+|+|||++. +|.+.=+||+.+.
T Consensus 113 ~Dl~~~Nil~~~-~~~~~l~Df~~~~ 137 (155)
T cd05120 113 GDLHPGNILVDD-GKILGIIDWEYAG 137 (155)
T ss_pred cCCCcceEEEEC-CcEEEEEeccccc
Confidence 899999999996 8999999998763
No 63
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=64.19 E-value=6.2 Score=35.26 Aligned_cols=24 Identities=46% Similarity=0.695 Sum_probs=21.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.++||++. .|+++-||||...
T Consensus 116 GDLTtsNiIl~--~~~i~~IDfGLg~ 139 (204)
T COG3642 116 GDLTTSNIILS--GGRIYFIDFGLGE 139 (204)
T ss_pred CCCccceEEEe--CCcEEEEECCccc
Confidence 89999999997 5779999999775
No 64
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=62.72 E-value=6.4 Score=34.71 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=24.2
Q ss_pred HHHhccCCCCCCceEEEec-CCeEEEEeccch
Q 017397 133 GYLLGLGDRHPSNLMLHRY-SGKILHIDFGDC 163 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~-tG~v~hIDfg~~ 163 (372)
-+.+-=||=|++||+++.. +|.+.=|||+.+
T Consensus 173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~ 204 (223)
T cd05154 173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELA 204 (223)
T ss_pred CcEEEECCCCcccEEEcCCCCcEEEEEecccc
Confidence 4556669999999999875 455677999865
No 65
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=62.34 E-value=7.1 Score=35.24 Aligned_cols=31 Identities=13% Similarity=0.213 Sum_probs=26.0
Q ss_pred HHHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 133 GYLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
..+|-=||-|++|||++..++.+.=|||-++
T Consensus 169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a 199 (235)
T cd05157 169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYA 199 (235)
T ss_pred CEEEEcCCCCcCcEEEeCCCCCEEEEEcccC
Confidence 3567779999999999964688999999866
No 66
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=61.83 E-value=5.9 Score=36.12 Aligned_cols=25 Identities=36% Similarity=0.469 Sum_probs=21.2
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccch
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-=||=||+||+++. +| +.=|||+.+
T Consensus 156 ~HgD~~~~Nii~~~-~~-~~iIDwe~a 180 (226)
T TIGR02172 156 LHGDFQIGNLITSG-KG-TYWIDLGDF 180 (226)
T ss_pred EecCCCCCcEEEcC-CC-cEEEechhc
Confidence 36899999999985 66 889999876
No 67
>PRK10271 thiK thiamine kinase; Provisional
Probab=58.28 E-value=9.2 Score=34.04 Aligned_cols=47 Identities=21% Similarity=0.223 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 114 IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 114 ~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.|+..-..|...... +-+..++-=||-||+||+++. +| +.=|||+++
T Consensus 58 ~wl~~~~~~~~~~~~-~~l~~~p~H~D~~~~N~~~~~-~~-~~lIDwe~a 104 (188)
T PRK10271 58 FWLRMLKRLRKAGEP-RPLRLAPLHMDVHAGNLVHSA-SG-LRLIDWEYA 104 (188)
T ss_pred HHHHHHHHHHhcccC-CCCCeeeecCCCCCccEEEEC-CC-EEEEeCCcc
Confidence 555433334333222 344667888999999999864 55 999999887
No 68
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=58.13 E-value=7.4 Score=34.59 Aligned_cols=45 Identities=29% Similarity=0.516 Sum_probs=28.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhc
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEV 191 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~ 191 (372)
||-++.|||++. |+++-||||.+.... .| ..-.-|.|++.+...-
T Consensus 131 GDLs~~NIlv~~--~~~~iIDf~qav~~~-----~p-~a~~~l~RDi~ni~~f 175 (188)
T PF01163_consen 131 GDLSEYNILVDD--GKVYIIDFGQAVDSS-----HP-NAEELLRRDIENIIRF 175 (188)
T ss_dssp SS-STTSEEEET--TCEEE--GTTEEETT-----ST-THHHHHHHHHHHHHHH
T ss_pred cCCChhhEEeec--ceEEEEecCcceecC-----Cc-cHHHHHHHHHHHHHHH
Confidence 899999999984 699999999887653 12 2233466665554443
No 69
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=57.75 E-value=8.2 Score=36.24 Aligned_cols=29 Identities=17% Similarity=-0.014 Sum_probs=22.8
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+.+-=||-||+|||++. ++.+.-|||..+
T Consensus 175 ~~l~HgD~~~~Nil~~~-~~~~~iIDfe~a 203 (296)
T cd05153 175 RGVIHADLFRDNVLFDG-DELSGVIDFYFA 203 (296)
T ss_pred CcCCccCcCcccEEEeC-CceEEEeehhhh
Confidence 44556999999999985 555579999876
No 70
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=57.69 E-value=7 Score=40.71 Aligned_cols=30 Identities=27% Similarity=0.336 Sum_probs=25.4
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+=.+|-||+|||++..-|++--+|||+.-.
T Consensus 436 vvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 436 VVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeecCCChhheeecCCCCcEEEEEechhhh
Confidence 346899999999975689999999998743
No 71
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=57.27 E-value=5.4 Score=35.60 Aligned_cols=30 Identities=23% Similarity=0.485 Sum_probs=21.6
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.++.=+|-++.|||++..+|++.-|||-++
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya 172 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYA 172 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHH
Confidence 678889999999999667999999999876
No 72
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=55.98 E-value=8.4 Score=37.27 Aligned_cols=25 Identities=40% Similarity=0.701 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||||+. +|.+.-+|||.+-
T Consensus 125 rDLkp~NIli~~-~~~vkL~DfG~~~ 149 (360)
T cd05627 125 RDIKPDNLLLDA-KGHVKLSDFGLCT 149 (360)
T ss_pred cCCCHHHEEECC-CCCEEEeeccCCc
Confidence 788999999986 9999999999874
No 73
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=55.78 E-value=8.2 Score=35.18 Aligned_cols=24 Identities=33% Similarity=0.620 Sum_probs=21.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-|-.|+||||+. .|+|=--|||.+
T Consensus 173 RDvKPsNiLIn~-~GqVKiCDFGIs 196 (282)
T KOG0984|consen 173 RDVKPSNILINY-DGQVKICDFGIS 196 (282)
T ss_pred ccCCcceEEEcc-CCcEEEcccccc
Confidence 477899999997 999999999986
No 74
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=55.36 E-value=22 Score=36.75 Aligned_cols=47 Identities=30% Similarity=0.424 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHH--hc--cCCCCCCceEEEecCCeEEEEeccch
Q 017397 113 EIWLERRTNYTRSLAVMSMVGYL--LG--LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 113 ~~w~~~r~~F~~SlA~~Si~~yi--lg--lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
..++..+..+..++|- .+.|+ .| =||-+|+|||+ .+|++.=||||.+
T Consensus 424 ~~~l~~~~~~~~~i~~--~L~~lH~~giiHrDlkp~NILl--~~~~~~liDFGla 474 (535)
T PRK09605 424 KDVLEGNPELVRKVGE--IVAKLHKAGIVHGDLTTSNFIV--RDDRLYLIDFGLG 474 (535)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHhCCCccCCCChHHEEE--ECCcEEEEeCccc
Confidence 3344344456666553 34454 33 37999999999 4899999999977
No 75
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=54.89 E-value=9.1 Score=36.96 Aligned_cols=47 Identities=28% Similarity=0.308 Sum_probs=31.5
Q ss_pred HHHHHhHHHHHHHHHHhcc--CCCCCCceEEEecCCeEEEEeccchhhhh
Q 017397 120 TNYTRSLAVMSMVGYLLGL--GDRHPSNLMLHRYSGKILHIDFGDCFEAS 167 (372)
Q Consensus 120 ~~F~~SlA~~Si~~yilgl--gDRH~~NIli~~~tG~v~hIDfg~~f~~~ 167 (372)
+.|.+|+-.---.++==|| -|-+|+||||+. +|.+--+|||.+-..+
T Consensus 123 k~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~-~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 123 KSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS-SGVLKLADFGLARAFS 171 (323)
T ss_pred HHHHHHHHHHHHHHHhCCeecccCCcceEEECC-CCcEeeeccchHHHhc
Confidence 3466655322222222233 578999999997 9999999999886443
No 76
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=53.20 E-value=17 Score=34.94 Aligned_cols=25 Identities=40% Similarity=0.566 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 155 rDLkp~NILl~~-~~~ikL~DFG~a~ 179 (340)
T PTZ00426 155 RDLKPENLLLDK-DGFIKMTDFGFAK 179 (340)
T ss_pred cCCCHHHEEECC-CCCEEEecCCCCe
Confidence 788999999985 9999999999774
No 77
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=53.15 E-value=13 Score=33.75 Aligned_cols=29 Identities=34% Similarity=0.521 Sum_probs=22.7
Q ss_pred HHHhccCCCCCCceEEEecCCeEE-EEeccch
Q 017397 133 GYLLGLGDRHPSNLMLHRYSGKIL-HIDFGDC 163 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~tG~v~-hIDfg~~ 163 (372)
.+.|-=||=|++|||++ .|++. -|||+.+
T Consensus 163 ~~~l~HGD~~~~Nvlv~--~~~i~giIDw~~a 192 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQ--DGRLSAVIDFGCL 192 (235)
T ss_pred CceEEeCCCCCCcEEEE--CCCEEEEEeCccc
Confidence 44566699999999997 45664 8999976
No 78
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=52.06 E-value=13 Score=35.39 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=23.5
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+.+-=||=|++||+++. +|.+.-|||+.+
T Consensus 187 ~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~ 215 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDG-DSVKGVIDFYFA 215 (307)
T ss_pred CccCCCCCCcCcEEEEC-CceEEEeecccc
Confidence 44556999999999986 565689999887
No 79
>PRK05231 homoserine kinase; Provisional
Probab=52.04 E-value=13 Score=35.48 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=21.2
Q ss_pred hccCCCCCCceEEEecCCeE-EEEeccch
Q 017397 136 LGLGDRHPSNLMLHRYSGKI-LHIDFGDC 163 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v-~hIDfg~~ 163 (372)
+-=||=||+||+++ .|++ .-|||+.+
T Consensus 189 liHgD~~~~Nil~~--~~~~~~iIDf~~~ 215 (319)
T PRK05231 189 VIHADLFRDNVLFE--GDRLSGFIDFYFA 215 (319)
T ss_pred cCCCCCCCCcEEEE--CCceEEEEecccc
Confidence 44599999999998 4565 69999887
No 80
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=50.87 E-value=12 Score=36.15 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=27.8
Q ss_pred HHHhccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 133 GYLLGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
..++.=+|-+++|||++...|++.-|||.++-
T Consensus 181 ~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 181 PVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred CeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 35778899999999998767899999999883
No 81
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=50.61 E-value=19 Score=34.24 Aligned_cols=59 Identities=29% Similarity=0.434 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHh---cc--CCCCCCceEEEecCCeEEEEeccchh---hhhc-CC-CC-CCCCCCeeecHh
Q 017397 125 SLAVMSMVGYLL---GL--GDRHPSNLMLHRYSGKILHIDFGDCF---EASM-NR-EK-FPEKVPFRLTRM 184 (372)
Q Consensus 125 SlA~~Si~~yil---gl--gDRH~~NIli~~~tG~v~hIDfg~~f---~~~~-~~-l~-~pE~VPFRLT~n 184 (372)
++|+.+.+.|+= |+ -|-.|+|||||. +|.|=--|||..= ++.. .+ -. -+=..|=||+|+
T Consensus 197 tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~ 266 (391)
T KOG0983|consen 197 TVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPP 266 (391)
T ss_pred HHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeecccccceeecccccccccCCccccCccccCCC
Confidence 677778888873 33 466799999996 9999999999761 1100 00 00 123567788887
No 82
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=50.33 E-value=12 Score=36.39 Aligned_cols=24 Identities=42% Similarity=0.767 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+||||+. +|.+.=+|||.+
T Consensus 125 rDlKp~NILi~~-~~~vkL~DFGla 148 (363)
T cd05628 125 RDIKPDNLLLDS-KGHVKLSDFGLC 148 (363)
T ss_pred cCCCHHHeEECC-CCCEEEeeccCc
Confidence 788999999986 899999999986
No 83
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=49.28 E-value=8.9 Score=34.49 Aligned_cols=27 Identities=33% Similarity=0.573 Sum_probs=23.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-=+|-.|+||+++ .+|++.-+|||.+.
T Consensus 120 ~H~dikp~NIl~~-~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 120 VHRDIKPENILLD-ENGEVKLIDFGSSV 146 (260)
T ss_dssp EESSBSGGGEEES-TTSEEEESSGTTTE
T ss_pred ccccccccccccc-cccccccccccccc
Confidence 3478899999999 69999999999985
No 84
>PLN02236 choline kinase
Probab=49.06 E-value=14 Score=35.95 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=27.6
Q ss_pred HHHhccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 133 GYLLGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
..++.=+|-|++|||++..+|.+.-|||.++.
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 45778899999999999767899999998773
No 85
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=48.44 E-value=9.5 Score=36.25 Aligned_cols=25 Identities=40% Similarity=0.585 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 125 ~dlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05587 125 RDLKLDNVMLDA-EGHIKIADFGMCK 149 (324)
T ss_pred cCCCHHHeEEcC-CCCEEEeecCcce
Confidence 788999999986 8999999999763
No 86
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=48.08 E-value=27 Score=33.25 Aligned_cols=25 Identities=32% Similarity=0.550 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+.
T Consensus 120 rDlkp~Nili~~-~~~~kl~Dfg~~~ 144 (327)
T cd05617 120 RDLKLDNVLLDA-DGHIKLTDYGMCK 144 (327)
T ss_pred cCCCHHHEEEeC-CCCEEEeccccce
Confidence 788999999986 8999999999875
No 87
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=47.07 E-value=15 Score=38.10 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=22.1
Q ss_pred CCCCCCceEEEe---cCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHR---YSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~---~tG~v~hIDfg~~ 163 (372)
+|=||+||++.+ ..++++-.|||..
T Consensus 325 aDPHPGNilv~~~~~~~~~ivllDhGl~ 352 (538)
T KOG1235|consen 325 ADPHPGNILVRPNPEGDEEIVLLDHGLY 352 (538)
T ss_pred CCCCCCcEEEecCCCCCccEEEEccccc
Confidence 699999999994 4899999999866
No 88
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=46.72 E-value=23 Score=33.67 Aligned_cols=25 Identities=32% Similarity=0.546 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 120 ~dlkp~Nili~~-~~~~kL~Dfg~~~ 144 (329)
T cd05588 120 RDLKLDNVLLDA-EGHIKLTDYGMCK 144 (329)
T ss_pred cCCCHHHeEECC-CCCEEECcCcccc
Confidence 799999999986 8999999999874
No 89
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=46.67 E-value=16 Score=34.52 Aligned_cols=29 Identities=24% Similarity=0.301 Sum_probs=24.7
Q ss_pred HHHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 133 GYLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 133 ~yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.+.+-=||=|++||+++. |.+.-|||+.+
T Consensus 186 ~~~liHgD~~~~Nil~~~--~~i~lIDfd~~ 214 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD--NEVYVIDFDYC 214 (313)
T ss_pred cCceEcCCCCcccEEEeC--CcEEEEECccc
Confidence 456778999999999985 78999999865
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=46.53 E-value=14 Score=35.06 Aligned_cols=25 Identities=44% Similarity=0.647 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 120 rDikp~NIll~~-~~~~kL~Dfg~~~ 144 (325)
T cd05594 120 RDLKLENLMLDK-DGHIKITDFGLCK 144 (325)
T ss_pred cCCCCCeEEECC-CCCEEEecCCCCe
Confidence 899999999986 8999999999763
No 91
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=46.45 E-value=15 Score=34.28 Aligned_cols=27 Identities=30% Similarity=0.503 Sum_probs=23.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
.=+|-.|.|||++. +|..+-+|||.+=
T Consensus 151 AH~DiKP~NILls~-~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 151 AHRDIKPANILLSD-SGLPVLMDLGSAT 177 (302)
T ss_pred cccCCCcceeEecC-CCceEEEeccCcc
Confidence 34699999999997 9999999999873
No 92
>PF01386 Ribosomal_L25p: Ribosomal L25p family; InterPro: IPR020055 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry models the short-form of the ribosomal L25 protein. The long-form has homology to the general stress protein Ctc of Bacillus subtilis, a mesophile, and ribosomal protein TL5 of Thermus thermophilus, a thermophile. Ribosomal protein L25 of Escherichia coli and Haemophilus influenzae appear to be orthologous but consist only of the N-terminal half of Ctc and TL5. Both short (L25-like) and full-length (CTC-like) members of this family bind the E-loop of bacterial 5S rRNA.; GO: 0003735 structural constituent of ribosome, 0008097 5S rRNA binding, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2HGQ_Y 2HGJ_Y 2Y19_Z 2WRL_Z 3KIT_Z 2WH2_Z 2WDN_Z 3V25_Z 3HUZ_Z 3KIY_Z ....
Probab=46.26 E-value=16 Score=28.12 Aligned_cols=16 Identities=38% Similarity=0.656 Sum_probs=13.3
Q ss_pred ceEEEecCCeEEEEec
Q 017397 145 NLMLHRYSGKILHIDF 160 (372)
Q Consensus 145 NIli~~~tG~v~hIDf 160 (372)
.|-.|.-+++++||||
T Consensus 73 evQ~~p~~~~i~HvDF 88 (88)
T PF01386_consen 73 EVQRDPVTDKILHVDF 88 (88)
T ss_dssp EEEEESSSSSEEEEEE
T ss_pred eeeeCCCCCCeEeccC
Confidence 3556788999999998
No 93
>PRK09188 serine/threonine protein kinase; Provisional
Probab=46.06 E-value=16 Score=36.14 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=25.7
Q ss_pred HHHHHH--hcc--CCC-CCCceEEEecCCeEEEEeccchh
Q 017397 130 SMVGYL--LGL--GDR-HPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 130 Si~~yi--lgl--gDR-H~~NIli~~~tG~v~hIDfg~~f 164 (372)
..+.|+ .|| +|- .|+|||++. +|++.=+|||.+-
T Consensus 122 ~aL~~lH~~gIiHrDL~KP~NILv~~-~~~ikLiDFGlA~ 160 (365)
T PRK09188 122 RALRDLHRAGITHNDLAKPQNWLMGP-DGEAAVIDFQLAS 160 (365)
T ss_pred HHHHHHHHCCCeeCCCCCcceEEEcC-CCCEEEEECccce
Confidence 444454 344 678 599999985 8999999999764
No 94
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=45.83 E-value=27 Score=34.06 Aligned_cols=24 Identities=38% Similarity=0.740 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+||||+. +|.+.=+|||.+
T Consensus 125 rDlKp~Nili~~-~~~~kL~DFGl~ 148 (381)
T cd05626 125 RDIKPDNILIDL-DGHIKLTDFGLC 148 (381)
T ss_pred cCCcHHHEEECC-CCCEEEeeCcCC
Confidence 688999999986 899999999976
No 95
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=45.54 E-value=33 Score=31.99 Aligned_cols=25 Identities=24% Similarity=0.191 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+-
T Consensus 162 ~dlkp~Nill~~-~~~~kl~DfG~~~ 186 (304)
T cd05096 162 RDLATRNCLVGE-NLTIKIADFGMSR 186 (304)
T ss_pred cCcchhheEEcC-CccEEECCCccce
Confidence 799999999996 8999999999763
No 96
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=45.39 E-value=47 Score=30.48 Aligned_cols=26 Identities=31% Similarity=0.475 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.=+|||.+..
T Consensus 119 ~dikp~Nili~~-~~~~~l~Dfg~~~~ 144 (277)
T cd05607 119 RDMKPENVLLDD-QGNCRLSDLGLAVE 144 (277)
T ss_pred ccCChHhEEEcC-CCCEEEeeceeeee
Confidence 788999999986 89999999998753
No 97
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=45.23 E-value=39 Score=29.78 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=25.9
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
+--||-+|+||+++. +|.+.=+|||.+...
T Consensus 119 i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 148 (253)
T cd05122 119 IIHRDIKAANILLTS-DGEVKLIDFGLSAQL 148 (253)
T ss_pred EecCCCCHHHEEEcc-CCeEEEeeccccccc
Confidence 566899999999996 899999999988644
No 98
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=44.69 E-value=21 Score=34.46 Aligned_cols=47 Identities=21% Similarity=0.263 Sum_probs=32.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhhhhcCCCCCCCCCCeeecHhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRML 185 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni 185 (372)
.|--|+|||++..+|.+-=.|||............-...||+-||+.
T Consensus 141 ~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~ 187 (313)
T KOG0198|consen 141 CDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNY 187 (313)
T ss_pred cCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccc
Confidence 56679999999767999999999887544211112235677777554
No 99
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=44.64 E-value=12 Score=35.65 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 120 ~dlkp~NIli~~-~~~~kL~DfG~~~ 144 (320)
T cd05590 120 RDLKLDNVLLDH-EGHCKLADFGMCK 144 (320)
T ss_pred CCCCHHHeEECC-CCcEEEeeCCCCe
Confidence 899999999986 8999999999763
No 100
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=44.34 E-value=15 Score=32.90 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
||-.+.|||++ .|+++-||||.+-..
T Consensus 149 GDLs~~NIL~~--~~~v~iIDF~qav~~ 174 (197)
T cd05146 149 ADLSEYNMLWH--DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCCCHHHEEEE--CCcEEEEECCCceeC
Confidence 99999999997 699999999977643
No 101
>PF07804 HipA_C: HipA-like C-terminal domain; InterPro: IPR012893 The members of this entry are similar to a region close to the C terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 3AKL_D 3AKJ_B 3AKK_D 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=44.34 E-value=34 Score=25.44 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=23.0
Q ss_pred HHHhHHHHHHHHHHhccCCCCCCceEEEecCCe
Q 017397 122 YTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGK 154 (372)
Q Consensus 122 F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~ 154 (372)
-...+.-+-++.|++|=+|+|..|+=|-..+|.
T Consensus 39 ~~~~l~~~~~fn~ligN~D~H~kN~s~l~~~~~ 71 (79)
T PF07804_consen 39 DVRELFRRLVFNYLIGNTDRHLKNFSFLYDGGG 71 (79)
T ss_dssp HHHHHHHHHHHHHHCTBS---CCCSEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCcCCcCCEEEEEcCCe
Confidence 344556667899999999999999988775544
No 102
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=43.38 E-value=37 Score=33.41 Aligned_cols=46 Identities=26% Similarity=0.303 Sum_probs=39.8
Q ss_pred HHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 119 RTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 119 r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-++|=.-++.+..+.|+||..|=|-+||.-+ -+.-+-||+-.+|..
T Consensus 133 v~~yY~r~G~llal~y~L~~~DlH~ENIIa~--g~~PvlIDlETlf~~ 178 (370)
T PF13575_consen 133 VERYYYRLGVLLALLYLLNGTDLHFENIIAS--GEYPVLIDLETLFHP 178 (370)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccceEEe--CCCcEEEehhhhCCc
Confidence 3458888999999999999999999999996 577888999888754
No 103
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=43.32 E-value=13 Score=35.03 Aligned_cols=25 Identities=40% Similarity=0.688 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 117 rDlkp~Nili~~-~~~~kl~Dfg~~~ 141 (312)
T cd05585 117 RDLKPENILLDY-QGHIALCDFGLCK 141 (312)
T ss_pred CCCCHHHeEECC-CCcEEEEECcccc
Confidence 688899999986 9999999999763
No 104
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=43.22 E-value=20 Score=31.98 Aligned_cols=42 Identities=26% Similarity=0.388 Sum_probs=28.3
Q ss_pred HHHHhHHHHHHHHHHhcc--CCCCCCceEEEecCC---eEEEEeccch
Q 017397 121 NYTRSLAVMSMVGYLLGL--GDRHPSNLMLHRYSG---KILHIDFGDC 163 (372)
Q Consensus 121 ~F~~SlA~~Si~~yilgl--gDRH~~NIli~~~tG---~v~hIDfg~~ 163 (372)
.+..++|.+---=+--|+ ||-++.|||++. .+ +++=|||+-+
T Consensus 122 ~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~-~~~~~~~~lIDld~~ 168 (206)
T PF06293_consen 122 ELLRALARLIAKLHDAGIYHGDLNPSNILVDP-DDGQYRFYLIDLDRM 168 (206)
T ss_pred HHHHHHHHHHHHHHHCcCCCCCCCcccEEEeC-CCCceeEEEEcchhc
Confidence 344444444433333343 899999999997 55 8999999754
No 105
>PHA03212 serine/threonine kinase US3; Provisional
Probab=43.20 E-value=41 Score=33.15 Aligned_cols=24 Identities=25% Similarity=0.506 Sum_probs=21.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. .|.+.=+|||.+
T Consensus 206 rDiKP~NIll~~-~~~vkL~DFG~a 229 (391)
T PHA03212 206 RDIKAENIFINH-PGDVCLGDFGAA 229 (391)
T ss_pred CCCChHhEEEcC-CCCEEEEeCCcc
Confidence 688999999986 899999999976
No 106
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=42.71 E-value=18 Score=35.15 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=20.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||=||+|++++..+.-+--|||++|-
T Consensus 202 ~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 202 GDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred cCCCccceeEcCCCCeeeEEEccccc
Confidence 89999999999744325568999883
No 107
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=42.51 E-value=30 Score=34.62 Aligned_cols=37 Identities=30% Similarity=0.609 Sum_probs=28.6
Q ss_pred HHHHHHH--hccC--CCCCCceEEEecCCeEEEEeccchhhh
Q 017397 129 MSMVGYL--LGLG--DRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 129 ~Si~~yi--lglg--DRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
...+.|+ +||- |--|+||||.. +|+|+-.||..++..
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvre-dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRE-DGHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEec-CCcEEeeeccccccC
Confidence 3455565 4553 77899999975 999999999988854
No 108
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=42.18 E-value=19 Score=32.33 Aligned_cols=28 Identities=36% Similarity=0.526 Sum_probs=25.2
Q ss_pred CCCCCCceEEEecCCeE--EEEeccchhhh
Q 017397 139 GDRHPSNLMLHRYSGKI--LHIDFGDCFEA 166 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v--~hIDfg~~f~~ 166 (372)
||-..+||++....+++ +-||||..+.+
T Consensus 137 GDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 137 GDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ccccccceEEecCCCcCceEEEeecchhcc
Confidence 89999999999988888 89999988754
No 109
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=42.14 E-value=42 Score=30.20 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=22.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-||-+|+||+++. +|++.=+|||.+
T Consensus 127 H~dl~p~nilv~~-~~~~~l~dfg~~ 151 (263)
T cd06625 127 HRDIKGANILRDS-AGNVKLGDFGAS 151 (263)
T ss_pred cCCCCHHHEEEcC-CCCEEEeecccc
Confidence 3899999999985 999999999976
No 110
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=41.99 E-value=81 Score=26.37 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=24.6
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+--||-+|+||+++..++++.=+||+.+-
T Consensus 113 ~~H~dl~~~ni~~~~~~~~~~l~d~~~~~ 141 (215)
T cd00180 113 IIHRDLKPENILLDSDNGKVKLADFGLSK 141 (215)
T ss_pred eeccCCCHhhEEEeCCCCcEEEecCCceE
Confidence 44579999999999657999999998875
No 111
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=41.95 E-value=14 Score=35.93 Aligned_cols=24 Identities=42% Similarity=0.836 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.-+|||.+
T Consensus 125 rDlkp~Nill~~-~~~ikL~DFG~a 148 (376)
T cd05598 125 RDIKPDNILIDR-DGHIKLTDFGLC 148 (376)
T ss_pred CCCCHHHEEECC-CCCEEEEeCCCC
Confidence 899999999985 999999999986
No 112
>PHA02882 putative serine/threonine kinase; Provisional
Probab=41.86 E-value=16 Score=34.05 Aligned_cols=24 Identities=33% Similarity=0.609 Sum_probs=21.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. .|.+.=+|||.+
T Consensus 150 rDiKp~Nill~~-~~~~~l~DFGla 173 (294)
T PHA02882 150 GDIKPENIMVDG-NNRGYIIDYGIA 173 (294)
T ss_pred CCCCHHHEEEcC-CCcEEEEEcCCc
Confidence 688899999986 889999999986
No 113
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=41.61 E-value=24 Score=32.05 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=22.6
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.+|-=||=||+|||++. .+.+-=|||+.+
T Consensus 163 ~~l~HgD~~~~Nil~~~-~~~~~iIDwe~a 191 (244)
T cd05150 163 LVVTHGDACLPNIIVDP-GKFSGFIDLGRL 191 (244)
T ss_pred eEEECCCCCCccEEEeC-CcEEEEEEcccc
Confidence 34455999999999986 455569999877
No 114
>PHA03207 serine/threonine kinase US3; Provisional
Probab=41.51 E-value=34 Score=33.56 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. .|.+.=+|||.+.
T Consensus 209 rDlkp~Nill~~-~~~~~l~DfG~a~ 233 (392)
T PHA03207 209 RDVKTENIFLDE-PENAVLGDFGAAC 233 (392)
T ss_pred cCCCHHHEEEcC-CCCEEEccCcccc
Confidence 788999999986 8999999999874
No 115
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=41.46 E-value=14 Score=35.01 Aligned_cols=25 Identities=44% Similarity=0.647 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||||+. +|.+.=+|||.+-
T Consensus 119 rDlkp~NIll~~-~~~~kl~DfG~a~ 143 (323)
T cd05571 119 RDLKLENLMLDK-DGHIKITDFGLCK 143 (323)
T ss_pred CCCCHHHEEECC-CCCEEEeeCCCCc
Confidence 789999999986 8999999999763
No 116
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=41.30 E-value=13 Score=35.28 Aligned_cols=25 Identities=40% Similarity=0.590 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 125 rDlkp~Nill~~-~~~~kL~DfG~~~ 149 (323)
T cd05616 125 RDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEECC-CCcEEEccCCCce
Confidence 788999999996 8999999999774
No 117
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=41.25 E-value=20 Score=33.68 Aligned_cols=28 Identities=25% Similarity=0.621 Sum_probs=22.0
Q ss_pred HhccCCCCCCceEEEecCCeEE-EEeccch
Q 017397 135 LLGLGDRHPSNLMLHRYSGKIL-HIDFGDC 163 (372)
Q Consensus 135 ilglgDRH~~NIli~~~tG~v~-hIDfg~~ 163 (372)
+|==||=||+|||++. +|++. =|||+.+
T Consensus 186 ~lvHGD~~~~Nilv~~-~~~~~gviDWe~a 214 (276)
T cd05152 186 VLVHGDLHPGHILIDE-DARVTGLIDWTEA 214 (276)
T ss_pred eeEeCCCCCCcEEEeC-CCCEEEEECcHhc
Confidence 3444999999999985 47764 7899876
No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=41.15 E-value=14 Score=35.10 Aligned_cols=25 Identities=28% Similarity=0.458 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 129 rDlkp~Nili~~-~~~~kl~DfG~~~ 153 (332)
T cd05614 129 RDIKLENILLDS-EGHVVLTDFGLSK 153 (332)
T ss_pred cCCCHHHeEECC-CCCEEEeeCcCCc
Confidence 788999999986 8999999999763
No 119
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=41.07 E-value=18 Score=34.33 Aligned_cols=24 Identities=38% Similarity=0.639 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+||||+. +|.+.=+|||.+
T Consensus 120 rDlkp~Nili~~-~~~~kl~Dfg~a 143 (330)
T cd05586 120 RDLKPENILLDA-TGHIALCDFGLS 143 (330)
T ss_pred ccCCHHHeEECC-CCCEEEecCCcC
Confidence 789999999986 899999999976
No 120
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=40.95 E-value=14 Score=35.00 Aligned_cols=26 Identities=35% Similarity=0.629 Sum_probs=23.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+|||++. +|.+.=+|||.+-
T Consensus 125 H~Dlkp~NIll~~-~~~~kL~Dfg~a~ 150 (330)
T cd05601 125 HRDIKPENVLIDR-TGHIKLADFGSAA 150 (330)
T ss_pred cccCchHheEECC-CCCEEeccCCCCe
Confidence 3789999999996 9999999999874
No 121
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=40.80 E-value=13 Score=35.16 Aligned_cols=25 Identities=36% Similarity=0.744 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+|+. +|.+.=+|||.+-
T Consensus 120 ~Dlkp~NIll~~-~~~~kl~Dfg~~~ 144 (321)
T cd05603 120 RDLKPENILLDS-QGHVVLTDFGLCK 144 (321)
T ss_pred ccCCHHHeEECC-CCCEEEccCCCCc
Confidence 789999999986 8999999999764
No 122
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=40.71 E-value=23 Score=33.32 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=29.9
Q ss_pred HHHHhHHHHHHHHHHhcc--CCCCCCceEEEe------cCCeEEEEeccch
Q 017397 121 NYTRSLAVMSMVGYLLGL--GDRHPSNLMLHR------YSGKILHIDFGDC 163 (372)
Q Consensus 121 ~F~~SlA~~Si~~yilgl--gDRH~~NIli~~------~tG~v~hIDfg~~ 163 (372)
...+.+|...--=+--|| ||-+++|||++. ..++++-|||+-+
T Consensus 142 ~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 142 MLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred HHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 455555554444444444 899999999985 2578999999755
No 123
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=40.69 E-value=13 Score=34.32 Aligned_cols=25 Identities=36% Similarity=0.557 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 134 ~dlkp~Nil~~~-~~~~kl~Dfg~~~ 158 (290)
T cd07862 134 RDLKPQNILVTS-SGQIKLADFGLAR 158 (290)
T ss_pred CCCCHHHEEEcC-CCCEEEccccceE
Confidence 789999999986 8999999999874
No 124
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=40.55 E-value=15 Score=34.83 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 120 rDikp~Nill~~-~~~~kL~Dfg~~~ 144 (321)
T cd05591 120 RDLKLDNILLDA-EGHCKLADFGMCK 144 (321)
T ss_pred cCCCHHHeEECC-CCCEEEeecccce
Confidence 788999999986 8999999999764
No 125
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=40.50 E-value=13 Score=34.59 Aligned_cols=25 Identities=32% Similarity=0.566 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+.
T Consensus 127 ~dlkp~Nil~~~-~~~~kl~DfG~~~ 151 (288)
T cd07871 127 RDLKPQNLLINE-KGELKLADFGLAR 151 (288)
T ss_pred CCCCHHHEEECC-CCCEEECcCccee
Confidence 799999999986 8999999999875
No 126
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=40.47 E-value=37 Score=31.61 Aligned_cols=26 Identities=27% Similarity=0.537 Sum_probs=23.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+.
T Consensus 139 H~dl~p~Nilv~~-~~~~~l~dfg~~~ 164 (292)
T cd06657 139 HRDIKSDSILLTH-DGRVKLSDFGFCA 164 (292)
T ss_pred cCCCCHHHEEECC-CCCEEEcccccce
Confidence 5999999999996 8999999999764
No 127
>PRK11768 serine/threonine protein kinase; Provisional
Probab=40.12 E-value=15 Score=35.31 Aligned_cols=29 Identities=34% Similarity=0.551 Sum_probs=22.8
Q ss_pred HHHHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 132 VGYLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 132 ~~yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
..+++-=||=|++|||++ .| +.-|||+.|
T Consensus 194 ~~~~liHgD~h~~NvL~~--d~-~~iIDFDd~ 222 (325)
T PRK11768 194 VRLLRLHGDCHPGNILWR--DG-PHFVDLDDA 222 (325)
T ss_pred CCccceecCCCchhcccc--CC-cEEEeCCCC
Confidence 356666799999999994 34 666999987
No 128
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=39.95 E-value=17 Score=33.96 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=22.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-||-+|+||+++. +|.+.-+|||.+
T Consensus 124 H~dl~p~NIll~~-~~~~~l~dfg~~ 148 (305)
T cd05609 124 HRDLKPDNLLITS-MGHIKLTDFGLS 148 (305)
T ss_pred ccCCchHHEEECC-CCCEEEeeCCCc
Confidence 4789999999985 999999999965
No 129
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=39.49 E-value=55 Score=29.33 Aligned_cols=27 Identities=26% Similarity=0.204 Sum_probs=23.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
+|-+|+||+++. +|.+.=+|||.+...
T Consensus 126 ~di~p~Nili~~-~~~~~l~d~g~~~~~ 152 (256)
T cd05039 126 RDLAARNVLVSE-DLVAKVSDFGLAKEA 152 (256)
T ss_pred hhcccceEEEeC-CCCEEEccccccccc
Confidence 799999999986 899999999987643
No 130
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=39.21 E-value=15 Score=34.88 Aligned_cols=25 Identities=36% Similarity=0.612 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 120 ~dlkp~Nill~~-~~~~kL~Dfg~a~ 144 (316)
T cd05592 120 RDLKLDNVLLDK-DGHIKIADFGMCK 144 (316)
T ss_pred CCCCHHHeEECC-CCCEEEccCcCCe
Confidence 688999999986 8999999999763
No 131
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=39.17 E-value=61 Score=30.99 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 197 rDikp~Nill~~-~~~vkL~DfG~a~ 221 (337)
T cd05054 197 RDLAARNILLSE-NNVVKICDFGLAR 221 (337)
T ss_pred CCCCcceEEEeC-CCcEEEeccccch
Confidence 799999999996 8999999999763
No 132
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=39.09 E-value=47 Score=30.65 Aligned_cols=27 Identities=30% Similarity=0.396 Sum_probs=23.4
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+..
T Consensus 133 H~dlkp~Nili~~-~~~~kl~dfg~~~~ 159 (292)
T cd06644 133 HRDLKAGNVLLTL-DGDIKLADFGVSAK 159 (292)
T ss_pred ecCCCcceEEEcC-CCCEEEccCcccee
Confidence 3899999999985 89999999997753
No 133
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=39.06 E-value=45 Score=30.07 Aligned_cols=25 Identities=24% Similarity=0.161 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.-+|||.+-
T Consensus 119 ~dlkp~nill~~-~~~~kl~Dfg~~~ 143 (257)
T cd05116 119 RDLAARNVLLVT-QHYAKISDFGLSK 143 (257)
T ss_pred cccchhhEEEcC-CCeEEECCCcccc
Confidence 899999999996 8888889999774
No 134
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=39.03 E-value=41 Score=31.98 Aligned_cols=25 Identities=40% Similarity=0.866 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+.
T Consensus 126 ~dlkp~Nill~~-~~~~kl~Dfg~~~ 150 (331)
T cd05597 126 RDIKPDNVLLDK-NGHIRLADFGSCL 150 (331)
T ss_pred CCCCHHHEEECC-CCCEEEEECCcee
Confidence 789999999985 8999999999874
No 135
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=38.92 E-value=17 Score=33.84 Aligned_cols=26 Identities=35% Similarity=0.583 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.-+|||.+..
T Consensus 125 ~dlkp~NIli~~-~~~~kl~Dfg~~~~ 150 (291)
T cd05612 125 RDLKPENILLDK-EGHIKLTDFGFAKK 150 (291)
T ss_pred cCCCHHHeEECC-CCCEEEEecCcchh
Confidence 688999999986 99999999998753
No 136
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=38.82 E-value=16 Score=34.66 Aligned_cols=25 Identities=36% Similarity=0.744 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+.
T Consensus 120 ~dikp~NIll~~-~~~~kl~Dfg~~~ 144 (323)
T cd05575 120 RDLKPENILLDS-QGHVVLTDFGLCK 144 (323)
T ss_pred CCCCHHHeEECC-CCcEEEeccCCCc
Confidence 788999999986 8999999999764
No 137
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=38.72 E-value=17 Score=34.67 Aligned_cols=25 Identities=36% Similarity=0.547 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+|||++. +|.+.=+|||.+-
T Consensus 125 ~dlkp~Nil~~~-~~~~kL~Dfg~a~ 149 (333)
T cd05600 125 RDLKPENFLIDA-SGHIKLTDFGLSK 149 (333)
T ss_pred cCCCHHHEEECC-CCCEEEEeCcCCc
Confidence 789999999986 9999999999774
No 138
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=38.60 E-value=24 Score=32.44 Aligned_cols=28 Identities=25% Similarity=0.223 Sum_probs=22.9
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccch
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.++-=||-||+||+++. +| +.=|||.++
T Consensus 146 ~~l~H~Dl~~~Nil~~~-~~-~~lIDwE~a 173 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTP-QG-LKLIDWEYA 173 (256)
T ss_pred CeeecCCCCcCcEEEeC-CC-CEEEecccc
Confidence 35566999999999986 55 889999776
No 139
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=38.60 E-value=17 Score=33.05 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=23.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+||+++. +|.+.-+|||.+..
T Consensus 124 ~dlkp~Nill~~-~~~~kl~dfg~~~~ 149 (269)
T cd05042 124 SDLALRNCQLTA-DLSVKIGDYGLALE 149 (269)
T ss_pred ccccHhheEecC-CCcEEEeccccccc
Confidence 788999999996 99999999998753
No 140
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=38.58 E-value=17 Score=37.32 Aligned_cols=23 Identities=39% Similarity=0.639 Sum_probs=21.2
Q ss_pred CCCCCceEEEecCCeEEEEeccch
Q 017397 140 DRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 140 DRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
|--|+|+|||. +|+|=-.|||.|
T Consensus 266 DIKPdNlLiD~-~GHiKLSDFGLs 288 (550)
T KOG0605|consen 266 DIKPDNLLIDA-KGHIKLSDFGLS 288 (550)
T ss_pred cCChhheeecC-CCCEeecccccc
Confidence 55699999997 999999999999
No 141
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=38.58 E-value=16 Score=34.62 Aligned_cols=25 Identities=36% Similarity=0.744 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 120 ~Dlkp~NIll~~-~~~~kL~DfG~~~ 144 (325)
T cd05604 120 RDLKPENILLDS-QGHVVLTDFGLCK 144 (325)
T ss_pred cCCCHHHeEECC-CCCEEEeecCCcc
Confidence 688999999986 8999999999864
No 142
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=37.86 E-value=15 Score=33.40 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=24.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-||-+|+||+++. +|++.-+|||.....
T Consensus 125 H~dl~~~ni~i~~-~~~~~l~df~~~~~~ 152 (280)
T cd05581 125 HRDLKPENILLDK-DMHIKITDFGTAKVL 152 (280)
T ss_pred ecCCCHHHeEECC-CCCEEecCCcccccc
Confidence 4799999999985 999999999987643
No 143
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=37.61 E-value=16 Score=34.74 Aligned_cols=24 Identities=42% Similarity=0.833 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.=+|||.+
T Consensus 120 rDlkp~Nili~~-~~~~kl~DfG~a 143 (325)
T cd05602 120 RDLKPENILLDS-QGHIVLTDFGLC 143 (325)
T ss_pred cCCCHHHeEECC-CCCEEEccCCCC
Confidence 799999999986 899999999976
No 144
>PRK05943 50S ribosomal protein L25; Reviewed
Probab=37.27 E-value=19 Score=28.08 Aligned_cols=16 Identities=38% Similarity=0.602 Sum_probs=12.6
Q ss_pred eEEEecCCeEEEEecc
Q 017397 146 LMLHRYSGKILHIDFG 161 (372)
Q Consensus 146 Ili~~~tG~v~hIDfg 161 (372)
|-.|.-+++++|+||-
T Consensus 77 vQ~~pv~~~i~HvDF~ 92 (94)
T PRK05943 77 VQRHPFKPKLEHIDFV 92 (94)
T ss_pred eecCcCCCCeEeEeee
Confidence 3346779999999993
No 145
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=37.22 E-value=17 Score=34.69 Aligned_cols=25 Identities=36% Similarity=0.686 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||||+. +|.+.-+|||.+-
T Consensus 125 ~Dlkp~NIll~~-~~~~kL~Dfg~~~ 149 (350)
T cd05573 125 RDIKPDNILIDA-DGHIKLADFGLCK 149 (350)
T ss_pred cCCCHHHeEECC-CCCEEeecCCCCc
Confidence 788999999986 8999999999875
No 146
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=37.05 E-value=62 Score=30.17 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+|||++. +|.+.=+|||.+.
T Consensus 148 ~dlkp~Nili~~-~~~~kl~dfg~~~ 172 (303)
T cd05088 148 RDLAARNILVGE-NYVAKIADFGLSR 172 (303)
T ss_pred cccchheEEecC-CCcEEeCccccCc
Confidence 788999999986 8999999999875
No 147
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=36.94 E-value=19 Score=35.18 Aligned_cols=26 Identities=35% Similarity=0.827 Sum_probs=23.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.=+|||.+..
T Consensus 166 rDLKp~NILl~~-~~~~kL~DFG~a~~ 191 (370)
T cd05621 166 RDVKPDNMLLDK-HGHLKLADFGTCMK 191 (370)
T ss_pred cCCCHHHEEECC-CCCEEEEeccccee
Confidence 688999999985 89999999998754
No 148
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=36.85 E-value=51 Score=29.67 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.-+|||.+-
T Consensus 124 ~dl~p~ni~i~~-~~~~kl~dfg~~~ 148 (256)
T cd05059 124 RDLAARNCLVGE-DNVVKVSDFGLAR 148 (256)
T ss_pred ccccHhhEEECC-CCcEEECCcccce
Confidence 889999999996 9999999999763
No 149
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=36.66 E-value=16 Score=34.67 Aligned_cols=25 Identities=44% Similarity=0.644 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 119 ~Dlkp~NIll~~-~~~~kL~Dfg~~~ 143 (323)
T cd05595 119 RDIKLENLMLDK-DGHIKITDFGLCK 143 (323)
T ss_pred cCCCHHHEEEcC-CCCEEecccHHhc
Confidence 688999999986 8999999999764
No 150
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=36.53 E-value=21 Score=32.70 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=23.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.-+|||...
T Consensus 124 H~dl~p~Nil~~~-~~~~~l~dfg~~~ 149 (277)
T cd06640 124 HRDIKAANVLLSE-QGDVKLADFGVAG 149 (277)
T ss_pred CcCCChhhEEEcC-CCCEEEcccccce
Confidence 4899999999986 9999999999774
No 151
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=36.31 E-value=27 Score=33.92 Aligned_cols=24 Identities=38% Similarity=0.660 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.-+|||.+
T Consensus 125 rDlkp~NIll~~-~~~~kl~DfGla 148 (377)
T cd05629 125 RDIKPDNILIDR-GGHIKLSDFGLS 148 (377)
T ss_pred cCCCHHHEEECC-CCCEEEeecccc
Confidence 688899999985 999999999976
No 152
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=36.28 E-value=29 Score=30.66 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=23.7
Q ss_pred HhccCCCCCCceEEEec-CC---eEEEEeccchh
Q 017397 135 LLGLGDRHPSNLMLHRY-SG---KILHIDFGDCF 164 (372)
Q Consensus 135 ilglgDRH~~NIli~~~-tG---~v~hIDfg~~f 164 (372)
++.=||=|++|||+... +| .+.-|||..+.
T Consensus 121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred EEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 45559999999999853 34 79999998763
No 153
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=36.17 E-value=19 Score=34.29 Aligned_cols=27 Identities=33% Similarity=0.463 Sum_probs=23.5
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
--+|-.|+||||+. +|.+.=+|||.+-
T Consensus 140 vH~dlkp~NIll~~-~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 140 IYRDLKPENLLLDN-KGHVKVTDFGFAK 166 (329)
T ss_pred eecCCCHHHEEECC-CCCEEEeeccCce
Confidence 45799999999986 9999999999774
No 154
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=36.10 E-value=18 Score=34.44 Aligned_cols=25 Identities=44% Similarity=0.647 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||||+. +|.+.=+|||.+-
T Consensus 119 rDikp~NIll~~-~~~~kL~DfG~~~ 143 (328)
T cd05593 119 RDLKLENLMLDK-DGHIKITDFGLCK 143 (328)
T ss_pred cccCHHHeEECC-CCcEEEecCcCCc
Confidence 789999999985 9999999999764
No 155
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=35.72 E-value=20 Score=34.92 Aligned_cols=24 Identities=42% Similarity=0.836 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.=+|||.+
T Consensus 125 rDlKp~NILl~~-~g~~kL~DFGla 148 (382)
T cd05625 125 RDIKPDNILIDR-DGHIKLTDFGLC 148 (382)
T ss_pred CCCCHHHEEECC-CCCEEEeECCCC
Confidence 788999999986 999999999986
No 156
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=35.50 E-value=23 Score=33.21 Aligned_cols=28 Identities=36% Similarity=0.539 Sum_probs=24.4
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--||-+|+||+|+. +|.+.=+|||.+..
T Consensus 125 ~H~dlkp~Nili~~-~~~~~l~dfg~~~~ 152 (316)
T cd05574 125 VYRDLKPENILLHE-SGHIMLSDFDLSKQ 152 (316)
T ss_pred eccCCChHHeEEcC-CCCEEEeecchhhc
Confidence 34899999999996 89999999998764
No 157
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=34.94 E-value=18 Score=33.85 Aligned_cols=25 Identities=32% Similarity=0.562 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+-
T Consensus 128 ~dlkp~Nill~~-~~~~kl~Dfg~~~ 152 (309)
T cd07872 128 RDLKPQNLLINE-RGELKLADFGLAR 152 (309)
T ss_pred CCCCHHHEEECC-CCCEEECccccce
Confidence 788999999986 8999999999874
No 158
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=34.83 E-value=24 Score=31.78 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=23.4
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+..
T Consensus 123 H~dl~p~nili~~-~~~~kl~Dfg~~~~ 149 (254)
T cd05083 123 HRDLAARNILVSE-DGVAKVSDFGLARV 149 (254)
T ss_pred ccccCcceEEEcC-CCcEEECCCcccee
Confidence 3899999999986 89999999998753
No 159
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=34.80 E-value=23 Score=35.95 Aligned_cols=25 Identities=32% Similarity=0.344 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+|||++. +|.+.=+|||.+.
T Consensus 193 rDlkp~NIll~~-~~~~kL~DFgla~ 217 (478)
T PTZ00267 193 RDLKSANIFLMP-TGIIKLGDFGFSK 217 (478)
T ss_pred CCcCHHhEEECC-CCcEEEEeCcCce
Confidence 799999999986 9999999999875
No 160
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=34.76 E-value=27 Score=32.14 Aligned_cols=26 Identities=27% Similarity=0.387 Sum_probs=23.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++..+|.+.=+|||.+-
T Consensus 134 ~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 134 RDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred cCCChHHEEEecCCCeEEEeecccce
Confidence 78999999999878999999999763
No 161
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=34.73 E-value=32 Score=31.73 Aligned_cols=27 Identities=30% Similarity=0.466 Sum_probs=23.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+||+++..++.+.=+|||.+..
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~ 152 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARA 152 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccc
Confidence 799999999998778888889998853
No 162
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=34.71 E-value=54 Score=30.51 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=23.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+|||++. +|.+.=+|||.+..
T Consensus 138 H~dL~p~Nili~~-~~~~~l~Dfg~~~~ 164 (297)
T cd06656 138 HRDIKSDNILLGM-DGSVKLTDFGFCAQ 164 (297)
T ss_pred cCCCCHHHEEECC-CCCEEECcCccceE
Confidence 3899999999985 99999999998753
No 163
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=34.70 E-value=18 Score=34.30 Aligned_cols=25 Identities=44% Similarity=0.659 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 120 rDlkp~Nil~~~-~~~~kl~Dfg~~~ 144 (316)
T cd05620 120 RDLKLDNVMLDR-DGHIKIADFGMCK 144 (316)
T ss_pred cCCCHHHeEECC-CCCEEeCccCCCe
Confidence 789999999986 8999999999763
No 164
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=34.62 E-value=22 Score=34.70 Aligned_cols=26 Identities=38% Similarity=0.857 Sum_probs=23.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.=+|||.+..
T Consensus 166 rDLkp~NILl~~-~~~~kL~DfG~~~~ 191 (370)
T cd05596 166 RDVKPDNMLLDK-SGHLKLADFGTCMK 191 (370)
T ss_pred cCCCHHHEEEcC-CCCEEEEeccceee
Confidence 788999999986 99999999998754
No 165
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=34.54 E-value=53 Score=30.34 Aligned_cols=26 Identities=31% Similarity=0.494 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.=+|||.+..
T Consensus 126 ~dikp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05630 126 RDLKPENILLDD-HGHIRISDLGLAVH 151 (285)
T ss_pred CCCCHHHEEECC-CCCEEEeeccceee
Confidence 688899999996 89999999998753
No 166
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=34.26 E-value=25 Score=31.49 Aligned_cols=25 Identities=20% Similarity=0.204 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+-
T Consensus 117 ~dl~p~nili~~-~~~~~l~d~g~~~ 141 (250)
T cd05085 117 RDLAARNCLVGE-NNVLKISDFGMSR 141 (250)
T ss_pred cccChheEEEcC-CCeEEECCCccce
Confidence 799999999986 9999999999764
No 167
>cd00495 Ribosomal_L25_TL5_CTC Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this family are believed to have two functions, acting as both ribosomal and stress proteins. In Escherichia coli, cells deleted for L25 were found to be viable; however, these cells grew slowly and had impaired protein synthesis capability. In Bacillus subtilis, CTC is induced under stress conditions and located in the ribosome; it has been proposed that CTC may be necessary for accurate translation under stress conditions. Ribosomal_L25_TL5_CTC is found only in bacteria and some plastids. Due to its limited taxonomic diversity and the viability of cells deleted for L25, this protein is not believed to be necessary for ribosomal assembly. Eukaryotes contain a protein called L25, which is not homologous to bacterial L
Probab=34.25 E-value=20 Score=27.71 Aligned_cols=15 Identities=47% Similarity=0.773 Sum_probs=12.5
Q ss_pred eEEEecCCeEEEEec
Q 017397 146 LMLHRYSGKILHIDF 160 (372)
Q Consensus 146 Ili~~~tG~v~hIDf 160 (372)
|-.|.-+++++||||
T Consensus 75 vQ~~pv~~~i~HvDF 89 (91)
T cd00495 75 VQRHPVKDKILHVDF 89 (91)
T ss_pred hhhccCCCCEEEEec
Confidence 445778999999999
No 168
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=34.23 E-value=23 Score=34.08 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=23.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.-+|||.+-.
T Consensus 143 rDikp~Nill~~-~~~~kl~Dfg~~~~ 168 (355)
T cd07874 143 RDLKPSNIVVKS-DCTLKILDFGLART 168 (355)
T ss_pred CCCChHHEEECC-CCCEEEeeCccccc
Confidence 688999999986 89999999998854
No 169
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=34.17 E-value=26 Score=33.80 Aligned_cols=42 Identities=21% Similarity=0.239 Sum_probs=28.6
Q ss_pred HHHhHHHHHHHHHHhcc--CCCCCCceEEEecCCeEEEEeccchh
Q 017397 122 YTRSLAVMSMVGYLLGL--GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 122 F~~SlA~~Si~~yilgl--gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
++.|+.-..-.++==++ -|--|+||||+. +|.|=--||||+=
T Consensus 106 ~l~Q~l~ai~~cHk~n~IHRDIKPENILit~-~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 106 YLYQLLKAIHFCHKNNCIHRDIKPENILITQ-NGVVKLCDFGFAR 149 (396)
T ss_pred HHHHHHHHhhhhhhcCeecccCChhheEEec-CCcEEeccchhhH
Confidence 44444433333333233 477899999997 9999999999873
No 170
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=33.95 E-value=19 Score=34.60 Aligned_cols=25 Identities=32% Similarity=0.497 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+.
T Consensus 192 rDlkp~NIll~~-~~~~kL~DfG~~~ 216 (353)
T PLN00034 192 RDIKPSNLLINS-AKNVKIADFGVSR 216 (353)
T ss_pred cCCCHHHEEEcC-CCCEEEcccccce
Confidence 789999999986 8999999999764
No 171
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=33.89 E-value=26 Score=31.76 Aligned_cols=28 Identities=18% Similarity=0.113 Sum_probs=23.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
=||-+|+||+++. +|.+.-+|||.+...
T Consensus 129 H~di~p~nili~~-~~~~~l~dfg~~~~~ 156 (266)
T cd05033 129 HRDLAARNILVNS-NLVCKVSDFGLSRRL 156 (266)
T ss_pred cCCCCcceEEEcC-CCCEEECccchhhcc
Confidence 3688999999986 899999999988643
No 172
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=33.84 E-value=30 Score=32.90 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 198 rDiKp~Nil~~~-~~~~kl~DfG~a~ 222 (338)
T cd05102 198 RDLAARNILLSE-NNVVKICDFGLAR 222 (338)
T ss_pred CCCccceEEEcC-CCcEEEeeccccc
Confidence 688899999986 8999999999763
No 173
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=33.75 E-value=25 Score=36.79 Aligned_cols=25 Identities=32% Similarity=0.541 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.|-.|+|||++..+|.+.=+|||.+
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA 303 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAA 303 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCc
Confidence 5888999999987899999999987
No 174
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=33.66 E-value=23 Score=32.79 Aligned_cols=27 Identities=37% Similarity=0.497 Sum_probs=23.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.-+|||.+-.
T Consensus 124 H~dl~p~nili~~-~~~~kl~dfg~~~~ 150 (290)
T cd05580 124 YRDLKPENLLLDS-DGYIKITDFGFAKR 150 (290)
T ss_pred cCCCCHHHEEECC-CCCEEEeeCCCccc
Confidence 4899999999986 89999999997753
No 175
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=33.61 E-value=21 Score=33.86 Aligned_cols=25 Identities=40% Similarity=0.590 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 125 rDikp~Nill~~-~~~ikL~Dfg~~~ 149 (323)
T cd05615 125 RDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEECC-CCCEEEecccccc
Confidence 688999999996 8999999999764
No 176
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=33.59 E-value=23 Score=33.83 Aligned_cols=25 Identities=32% Similarity=0.551 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 120 ~Dikp~Nili~~-~~~~kL~DfG~~~ 144 (329)
T cd05618 120 RDLKLDNVLLDS-EGHIKLTDYGMCK 144 (329)
T ss_pred CCCCHHHEEECC-CCCEEEeeCCccc
Confidence 799999999986 8999999999774
No 177
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=33.56 E-value=54 Score=30.91 Aligned_cols=25 Identities=28% Similarity=0.392 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 127 ~dlkp~NIll~~-~~~~kL~Dfg~~~ 151 (338)
T cd07859 127 RDLKPKNILANA-DCKLKICDFGLAR 151 (338)
T ss_pred CCCCHHHeEECC-CCcEEEccCcccc
Confidence 788999999986 9999999999874
No 178
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=33.39 E-value=22 Score=34.26 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 147 rDlkp~NIl~~~-~~~~kl~Dfg~a~ 171 (359)
T cd07876 147 RDLKPSNIVVKS-DCTLKILDFGLAR 171 (359)
T ss_pred CCCCHHHEEECC-CCCEEEecCCCcc
Confidence 688999999986 8999999999874
No 179
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=33.38 E-value=26 Score=31.70 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+.
T Consensus 127 ~dl~p~Nil~~~-~~~~~l~dfg~~~ 151 (261)
T cd05068 127 RDLAARNVLVGE-NNICKVADFGLAR 151 (261)
T ss_pred ccCCcceEEEcC-CCCEEECCcceEE
Confidence 899999999996 8999999999764
No 180
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=33.21 E-value=23 Score=33.64 Aligned_cols=24 Identities=38% Similarity=0.761 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.=+|||.+
T Consensus 124 ~dlkp~Nil~~~-~~~~kl~Dfg~~ 147 (323)
T cd05584 124 RDLKPENILLDA-QGHVKLTDFGLC 147 (323)
T ss_pred CCCCHHHeEECC-CCCEEEeeCcCC
Confidence 799999999986 899999999975
No 181
>PF05191 ADK_lid: Adenylate kinase, active site lid; InterPro: IPR007862 Adenylate kinases (ADK; 2.7.4.3 from EC) are phosphotransferases that catalyse the Mg-dependent reversible conversion of ATP and AMP to two molecules of ADP, an essential reaction for many processes in living cells. In large variants of adenylate kinase, the AMP and ATP substrates are buried in a domain that undergoes conformational changes from an open to a closed state when bound to substrate; the ligand is then contained within a highly specific environment required for catalysis. Adenylate kinase is a 3-domain protein consisting of a large central CORE domain flanked by a LID domain on one side and the AMP-binding NMPbind domain on the other []. The LID domain binds ATP and covers the phosphates at the active site. The substrates first bind the CORE domain, followed by closure of the active site by the LID and NMPbind domains. Comparisons of adenylate kinases have revealed a particular divergence in the active site lid. In some organisms, particularly the Gram-positive bacteria, residues in the lid domain have been mutated to cysteines and these cysteine residues (two CX(n)C motifs) are responsible for the binding of a zinc ion. The bound zinc ion in the lid domain is clearly structurally homologous to Zinc-finger domains. However, it is unclear whether the adenylate kinase lid is a novel zinc-finger DNA/RNA binding domain, or that the lid bound zinc serves a purely structural function [].; GO: 0004017 adenylate kinase activity; PDB: 3BE4_A 2OSB_B 2ORI_A 2EU8_A 3DL0_A 1P3J_A 2QAJ_A 2OO7_A 2P3S_A 3DKV_A ....
Probab=33.20 E-value=25 Score=22.35 Aligned_cols=16 Identities=31% Similarity=0.617 Sum_probs=12.6
Q ss_pred EEEecCCeEEEEeccc
Q 017397 147 MLHRYSGKILHIDFGD 162 (372)
Q Consensus 147 li~~~tG~v~hIDfg~ 162 (372)
.++...|+++|+.|.+
T Consensus 2 r~C~~Cg~~Yh~~~~p 17 (36)
T PF05191_consen 2 RICPKCGRIYHIEFNP 17 (36)
T ss_dssp EEETTTTEEEETTTB-
T ss_pred cCcCCCCCccccccCC
Confidence 3567899999999965
No 182
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=33.11 E-value=24 Score=33.68 Aligned_cols=26 Identities=38% Similarity=0.792 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.=+|||.+..
T Consensus 126 rDlkp~Nill~~-~~~~kl~DfG~a~~ 151 (331)
T cd05624 126 RDIKPDNVLLDM-NGHIRLADFGSCLK 151 (331)
T ss_pred ccCchHHEEEcC-CCCEEEEeccceee
Confidence 688999999985 99999999998753
No 183
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=33.07 E-value=64 Score=29.08 Aligned_cols=28 Identities=36% Similarity=0.357 Sum_probs=23.9
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--||-+|+||+++. +|.+.=+|||.+-.
T Consensus 124 ~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 151 (265)
T cd06631 124 VHRDIKGNNVMLMP-NGIIKLIDFGCARR 151 (265)
T ss_pred ccCCcCHHhEEECC-CCeEEeccchhhHh
Confidence 34899999999985 89999999998753
No 184
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=33.05 E-value=26 Score=31.44 Aligned_cols=28 Identities=25% Similarity=0.350 Sum_probs=24.1
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--||-.|+||+++. +|.+.-+|||.+..
T Consensus 123 ~h~dl~p~ni~i~~-~~~~~l~d~g~~~~ 150 (262)
T cd06613 123 IHRDIKGANILLTE-DGDVKLADFGVSAQ 150 (262)
T ss_pred eecCCChhhEEECC-CCCEEECccccchh
Confidence 34899999999995 89999999998753
No 185
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=32.74 E-value=26 Score=33.32 Aligned_cols=24 Identities=33% Similarity=0.470 Sum_probs=21.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-|-.|+|||+|. +-++.-.|||++
T Consensus 147 RDLKpENILldd-n~~i~isDFGFa 170 (411)
T KOG0599|consen 147 RDLKPENILLDD-NMNIKISDFGFA 170 (411)
T ss_pred cccChhheeecc-ccceEEecccee
Confidence 577899999996 889999999987
No 186
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=32.70 E-value=23 Score=32.18 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 136 ~dlkp~Nil~~~-~~~~kl~Dfg~~~ 160 (272)
T cd05075 136 RDLAARNCMLNE-NMNVCVADFGLSK 160 (272)
T ss_pred cccchhheEEcC-CCCEEECCCCccc
Confidence 788899999986 8999999999764
No 187
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=32.60 E-value=31 Score=33.71 Aligned_cols=25 Identities=32% Similarity=0.559 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
.|--|+|||+|..||.+=--|||.+
T Consensus 149 RDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 149 RDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred CCCChheEEEcCCCCeEEeccCCcc
Confidence 4778999999999999999999866
No 188
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=32.49 E-value=33 Score=30.77 Aligned_cols=26 Identities=27% Similarity=0.234 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+-
T Consensus 125 H~di~p~nil~~~-~~~~~l~df~~~~ 150 (257)
T cd08223 125 HRDLKTQNVFLTR-TNIIKVGDLGIAR 150 (257)
T ss_pred ccCCCchhEEEec-CCcEEEecccceE
Confidence 4899999999986 9999999999763
No 189
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=32.36 E-value=61 Score=30.21 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+.
T Consensus 164 ~dlkp~Nill~~-~~~~kL~dfg~a~ 188 (307)
T cd05098 164 RDLAARNVLVTE-DNVMKIADFGLAR 188 (307)
T ss_pred ccccHHheEEcC-CCcEEECCCcccc
Confidence 788899999996 7999999999764
No 190
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=32.26 E-value=95 Score=30.62 Aligned_cols=46 Identities=28% Similarity=0.380 Sum_probs=31.1
Q ss_pred HHHHHHHhHHHHHHHHHHhcc--CCCCCCceEEEecCCeEEEEeccchh
Q 017397 118 RRTNYTRSLAVMSMVGYLLGL--GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 118 ~r~~F~~SlA~~Si~~yilgl--gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|. |-+++...---++-.|| .|--|+|||+|..+|++--+|||..=
T Consensus 122 ar~-~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 122 ARK-YFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred HHH-HHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 443 44555433333333443 57789999999866999999999874
No 191
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=32.21 E-value=28 Score=31.59 Aligned_cols=26 Identities=31% Similarity=0.501 Sum_probs=23.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++...|.+.-+|||.+.
T Consensus 132 ~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 132 RDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred cCCCHHHEEEcCCCCeEEEecchhhe
Confidence 89999999999878999999999774
No 192
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=32.19 E-value=21 Score=33.32 Aligned_cols=26 Identities=31% Similarity=0.535 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+|||++. +|.+.=+|||.+..
T Consensus 127 ~dlkp~Nill~~-~~~~kl~Dfg~~~~ 152 (303)
T cd07869 127 RDLKPQNLLISD-TGELKLADFGLARA 152 (303)
T ss_pred CCCCHHHEEECC-CCCEEECCCCccee
Confidence 799999999986 89999999998753
No 193
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=32.05 E-value=29 Score=33.02 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 128 ~dlkp~Nil~~~-~~~~kl~Dfg~~~ 152 (331)
T cd06649 128 RDVKPSNILVNS-RGEIKLCDFGVSG 152 (331)
T ss_pred CCCChhhEEEcC-CCcEEEccCcccc
Confidence 799999999986 8999999999763
No 194
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=31.87 E-value=26 Score=33.84 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=23.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.-+|||.+-.
T Consensus 150 ~Dlkp~NIll~~-~~~~kL~DfG~a~~ 175 (364)
T cd07875 150 RDLKPSNIVVKS-DCTLKILDFGLART 175 (364)
T ss_pred CCCCHHHEEECC-CCcEEEEeCCCccc
Confidence 788999999986 89999999998854
No 195
>PHA03209 serine/threonine kinase US3; Provisional
Probab=31.74 E-value=64 Score=31.12 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. .|.+.=+|||.+-
T Consensus 181 rDlkp~Nill~~-~~~~kl~DfG~a~ 205 (357)
T PHA03209 181 RDVKTENIFIND-VDQVCIGDLGAAQ 205 (357)
T ss_pred CCCCHHHEEECC-CCCEEEecCcccc
Confidence 788999999986 8999999999774
No 196
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=31.72 E-value=22 Score=33.09 Aligned_cols=27 Identities=30% Similarity=0.497 Sum_probs=23.4
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-+|+||+++. +|.+.-+|||.+..
T Consensus 127 H~dlkp~Nil~~~-~~~~kl~dfg~~~~ 153 (301)
T cd07873 127 HRDLKPQNLLINE-RGELKLADFGLARA 153 (301)
T ss_pred CCCCCHHHEEECC-CCcEEECcCcchhc
Confidence 3799999999986 89999999998753
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=31.68 E-value=71 Score=29.16 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. .|.+.-+|||.+.
T Consensus 148 ~dlkp~nili~~-~~~~kl~dfg~~~ 172 (286)
T cd06638 148 RDVKGNNILLTT-EGGVKLVDFGVSA 172 (286)
T ss_pred cCCCHHhEEECC-CCCEEEccCCcee
Confidence 788999999986 7889999999875
No 198
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=31.67 E-value=32 Score=31.42 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=22.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+||+++. +|.+.-+|||.+-
T Consensus 124 H~dl~p~ni~i~~-~~~~~l~dfg~~~ 149 (277)
T cd06642 124 HRDIKAANVLLSE-QGDVKLADFGVAG 149 (277)
T ss_pred ccCCChheEEEeC-CCCEEEccccccc
Confidence 3799999999986 8999999999763
No 199
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=31.61 E-value=28 Score=31.33 Aligned_cols=27 Identities=19% Similarity=0.062 Sum_probs=23.3
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
--||-+|+||+++. +|.+.=+|||.+.
T Consensus 125 ~h~di~p~nili~~-~~~~~l~d~g~~~ 151 (261)
T cd05034 125 IHRDLAARNILVGE-NLVCKIADFGLAR 151 (261)
T ss_pred ccCCcchheEEEcC-CCCEEECccccce
Confidence 34899999999986 8999999999765
No 200
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=31.54 E-value=29 Score=31.12 Aligned_cols=26 Identities=19% Similarity=0.176 Sum_probs=22.5
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=||-+|+|||++. +|.+.=+|||.+-
T Consensus 117 H~dl~p~nil~~~-~~~~kl~dfg~~~ 142 (252)
T cd05084 117 HRDLAARNCLVTE-KNVLKISDFGMSR 142 (252)
T ss_pred ccccchheEEEcC-CCcEEECccccCc
Confidence 3788999999985 8999999999764
No 201
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=31.49 E-value=81 Score=29.27 Aligned_cols=25 Identities=20% Similarity=0.264 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+-
T Consensus 161 ~dlkp~Nili~~-~~~~kl~D~g~~~ 185 (304)
T cd05101 161 RDLAARNVLVTE-NNVMKIADFGLAR 185 (304)
T ss_pred cccccceEEEcC-CCcEEECCCccce
Confidence 689999999985 8999999999874
No 202
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=31.36 E-value=24 Score=33.96 Aligned_cols=26 Identities=42% Similarity=0.662 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=+|-.|+||||+. +|.+.=+|||.+-
T Consensus 124 H~Dlkp~NIl~~~-~~~~kl~Dfg~~~ 149 (364)
T cd05599 124 HRDIKPDNLLLDA-KGHIKLSDFGLCT 149 (364)
T ss_pred eccCCHHHeEECC-CCCEEEeecccce
Confidence 3788999999986 9999999999763
No 203
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=31.28 E-value=27 Score=32.00 Aligned_cols=26 Identities=35% Similarity=0.546 Sum_probs=23.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+.
T Consensus 122 H~dl~p~nil~~~-~~~~~l~df~~~~ 147 (283)
T cd07835 122 HRDLKPQNLLIDR-EGALKLADFGLAR 147 (283)
T ss_pred CCCCCHHHEEEcC-CCcEEEeeccccc
Confidence 3899999999997 9999999999875
No 204
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=31.21 E-value=70 Score=29.23 Aligned_cols=26 Identities=27% Similarity=0.514 Sum_probs=23.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.=+|||.+..
T Consensus 127 ~dl~p~nil~~~-~~~~~l~dfg~~~~ 152 (286)
T cd06622 127 RDVKPTNVLVNG-NGQVKLCDFGVSGN 152 (286)
T ss_pred CCCCHHHEEECC-CCCEEEeecCCccc
Confidence 899999999997 99999999998753
No 205
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=31.05 E-value=78 Score=29.15 Aligned_cols=25 Identities=28% Similarity=0.573 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+-
T Consensus 139 ~dl~p~Nil~~~-~~~~~l~d~g~~~ 163 (285)
T cd06648 139 RDIKSDSILLTS-DGRVKLSDFGFCA 163 (285)
T ss_pred CCCChhhEEEcC-CCcEEEcccccch
Confidence 899999999986 8999999999653
No 206
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=30.98 E-value=65 Score=29.39 Aligned_cols=25 Identities=32% Similarity=0.607 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. .|.+.=+|||.+-
T Consensus 123 ~dl~~~nil~~~-~~~~~l~dfg~~~ 147 (284)
T cd07839 123 RDLKPQNLLINK-NGELKLADFGLAR 147 (284)
T ss_pred CCCCHHHEEEcC-CCcEEECccchhh
Confidence 889999999996 8999999999875
No 207
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=30.88 E-value=69 Score=29.72 Aligned_cols=25 Identities=32% Similarity=0.584 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+||+++. .|.+.=+|||.+.
T Consensus 142 ~dlkp~Nill~~-~~~~kL~dfg~~~ 166 (292)
T cd06658 142 RDIKSDSILLTS-DGRIKLSDFGFCA 166 (292)
T ss_pred cCCCHHHEEEcC-CCCEEEccCcchh
Confidence 899999999986 7999999999774
No 208
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=30.84 E-value=27 Score=31.55 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.-+|||.+-
T Consensus 127 ~dl~p~nili~~-~~~~~l~dfg~~~ 151 (261)
T cd05072 127 RDLRAANVLVSE-SLMCKIADFGLAR 151 (261)
T ss_pred cccchhhEEecC-CCcEEECCCccce
Confidence 688899999996 9999999999875
No 209
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=30.83 E-value=25 Score=31.97 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=24.0
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-=||-+|+||+++. +|.+.=+|||....
T Consensus 120 ~H~dl~p~nili~~-~~~~~l~df~~~~~ 147 (283)
T cd05118 120 LHRDLKPENLLINT-EGVLKLADFGLARS 147 (283)
T ss_pred eecCcCHHHEEECC-CCcEEEeeeeeeEe
Confidence 44899999999995 89999999998754
No 210
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=30.83 E-value=32 Score=31.11 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+-
T Consensus 126 ~dl~~~Nill~~-~~~~~l~dfg~~~ 150 (260)
T cd05069 126 RDLRAANILVGD-NLVCKIADFGLAR 150 (260)
T ss_pred cccCcceEEEcC-CCeEEECCCccce
Confidence 899999999986 8999999999774
No 211
>PHA03211 serine/threonine kinase US3; Provisional
Probab=30.78 E-value=62 Score=32.91 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+||||+. +|.+.=+|||.+
T Consensus 284 rDLKP~NILl~~-~~~vkL~DFGla 307 (461)
T PHA03211 284 RDIKTENVLVNG-PEDICLGDFGAA 307 (461)
T ss_pred CcCCHHHEEECC-CCCEEEcccCCc
Confidence 688999999986 899999999976
No 212
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=30.73 E-value=31 Score=34.03 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=23.0
Q ss_pred HhccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 135 LLGLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 135 ilglgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
.|=-||-|++|||++. +.++-||+-++|-
T Consensus 193 ~llHGDl~~gNi~~~~--~~~~~iD~e~~~~ 221 (370)
T TIGR01767 193 TLLHGDLHSGSIFVSE--HETKVIDPEFAFY 221 (370)
T ss_pred eeeeccCCcccEEEcC--CCCEEEcCccccc
Confidence 3456999999999974 4588999987763
No 213
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=30.72 E-value=34 Score=30.74 Aligned_cols=26 Identities=31% Similarity=0.454 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=||-.|+||+++. +|.+.=+|||.+.
T Consensus 123 H~dl~p~nili~~-~~~~~l~dfg~~~ 148 (255)
T cd08219 123 HRDIKSKNIFLTQ-NGKVKLGDFGSAR 148 (255)
T ss_pred cCCCCcceEEECC-CCcEEEcccCcce
Confidence 3899999999986 9999999999774
No 214
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=30.64 E-value=81 Score=29.04 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=24.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-||-.|+||+++. +|.+.=+|||.+...
T Consensus 125 H~dl~p~nill~~-~~~~~l~dfg~~~~~ 152 (298)
T cd07841 125 HRDLKPNNLLIAS-DGVLKLADFGLARSF 152 (298)
T ss_pred ecCCChhhEEEcC-CCCEEEccceeeeec
Confidence 3899999999996 899999999988643
No 215
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=30.46 E-value=31 Score=31.02 Aligned_cols=27 Identities=22% Similarity=0.198 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-.|+||+++. +|.+.=+|||.+-.
T Consensus 125 H~dlkp~nil~~~-~~~~kl~dfg~~~~ 151 (256)
T cd05082 125 HRDLAARNVLVSE-DNVAKVSDFGLTKE 151 (256)
T ss_pred ccccchheEEEcC-CCcEEecCCcccee
Confidence 3688899999986 99999999997653
No 216
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=30.42 E-value=29 Score=33.84 Aligned_cols=25 Identities=40% Similarity=0.876 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+.
T Consensus 166 rDLkp~NIll~~-~~~ikL~DfG~a~ 190 (371)
T cd05622 166 RDVKPDNMLLDK-SGHLKLADFGTCM 190 (371)
T ss_pred CCCCHHHEEECC-CCCEEEEeCCcee
Confidence 788999999986 8999999999875
No 217
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=30.41 E-value=36 Score=30.55 Aligned_cols=26 Identities=27% Similarity=0.253 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+||+++. +|.+.=+|||..-
T Consensus 120 H~di~p~nil~~~-~~~~kl~dfg~~~ 145 (257)
T cd05040 120 HRDLAARNILLAS-DDKVKIGDFGLMR 145 (257)
T ss_pred ccccCcccEEEec-CCEEEeccccccc
Confidence 4789999999997 7999999999764
No 218
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=30.11 E-value=29 Score=31.07 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=23.5
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+-.
T Consensus 133 h~dl~p~nili~~-~~~~kl~d~g~~~~ 159 (265)
T cd08217 133 HRDLKPANIFLDA-NNNVKLGDFGLAKI 159 (265)
T ss_pred ecCCCHHHEEEec-CCCEEEeccccccc
Confidence 4799999999995 89999999997754
No 219
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=30.08 E-value=98 Score=28.73 Aligned_cols=29 Identities=28% Similarity=0.437 Sum_probs=24.5
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+--||-+|+||+++. +|.+.=+|||.+-.
T Consensus 136 i~H~dL~p~Nili~~-~~~~kl~dfg~~~~ 164 (296)
T cd06655 136 VIHRDIKSDNVLLGM-DGSVKLTDFGFCAQ 164 (296)
T ss_pred cccCCCCHHHEEECC-CCCEEEccCccchh
Confidence 345899999999986 89999999997653
No 220
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=29.97 E-value=35 Score=30.39 Aligned_cols=28 Identities=18% Similarity=0.113 Sum_probs=24.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-||-.|+||+++. +|.+.=+|||.+...
T Consensus 126 h~dl~~~nil~~~-~~~~~l~dfg~~~~~ 153 (258)
T smart00219 126 HRDLAARNCLVGE-NLVVKISDFGLSRDL 153 (258)
T ss_pred ecccccceEEEcc-CCeEEEcccCCceec
Confidence 4799999999986 889999999988644
No 221
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=29.93 E-value=28 Score=31.40 Aligned_cols=26 Identities=23% Similarity=0.416 Sum_probs=23.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.-+|||.+.
T Consensus 136 H~~l~p~ni~~~~-~~~~~l~d~~~~~ 161 (275)
T cd06608 136 HRDIKGQNILLTK-NAEVKLVDFGVSA 161 (275)
T ss_pred cCCCCHHHEEEcc-CCeEEECCCccce
Confidence 3899999999996 8999999999764
No 222
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=29.85 E-value=26 Score=33.22 Aligned_cols=25 Identities=36% Similarity=0.587 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 120 rdikp~Nil~~~-~~~~kl~Dfg~~~ 144 (316)
T cd05619 120 RDLKLDNILLDT-DGHIKIADFGMCK 144 (316)
T ss_pred CCCCHHHEEECC-CCCEEEccCCcce
Confidence 789999999986 8999999999764
No 223
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=29.84 E-value=2.4e+02 Score=26.82 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+||+++. +|.+.=+|||.+..
T Consensus 144 ~dlkp~NIll~~-~~~~kl~dfg~~~~ 169 (345)
T cd07877 144 RDLKPSNLAVNE-DCELKILDFGLARH 169 (345)
T ss_pred cCCChHHEEEcC-CCCEEEeccccccc
Confidence 688999999986 89999999998754
No 224
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=29.63 E-value=78 Score=28.09 Aligned_cols=29 Identities=17% Similarity=0.054 Sum_probs=24.5
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
--||-+|+||+++. +|.+.-+|||.+.-.
T Consensus 125 ~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~ 153 (256)
T cd08530 125 LHRDLKSANILLVA-NDLVKIGDLGISKVL 153 (256)
T ss_pred ccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence 35889999999997 899999999987543
No 225
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=29.53 E-value=28 Score=31.60 Aligned_cols=27 Identities=19% Similarity=0.103 Sum_probs=23.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-+|+|||++. +|.+.=+|||.+-.
T Consensus 129 h~dlkp~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd05066 129 HRDLAARNILVNS-NLVCKVSDFGLSRV 155 (267)
T ss_pred ehhhchhcEEECC-CCeEEeCCCCcccc
Confidence 4899999999986 89999999998753
No 226
>PTZ00036 glycogen synthase kinase; Provisional
Probab=29.49 E-value=30 Score=34.76 Aligned_cols=26 Identities=27% Similarity=0.454 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++..++.+.=+|||.+-
T Consensus 194 rDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 194 RDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CCcCHHHEEEcCCCCceeeeccccch
Confidence 58899999999867788889999884
No 227
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=29.37 E-value=84 Score=28.76 Aligned_cols=25 Identities=28% Similarity=0.484 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||...
T Consensus 140 ~dl~p~ni~i~~-~~~~~l~d~~~~~ 164 (286)
T cd06614 140 RDIKSDNILLSK-DGSVKLADFGFAA 164 (286)
T ss_pred CCCChhhEEEcC-CCCEEECccchhh
Confidence 899999999995 9999999999765
No 228
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=29.29 E-value=26 Score=31.80 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.-+|||.+.
T Consensus 135 ~dl~~~nili~~-~~~~~l~Dfg~~~ 159 (272)
T cd06637 135 RDIKGQNVLLTE-NAEVKLVDFGVSA 159 (272)
T ss_pred CCCCHHHEEECC-CCCEEEccCCCce
Confidence 788999999996 8999999999875
No 229
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=29.19 E-value=41 Score=30.04 Aligned_cols=26 Identities=23% Similarity=0.161 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+.
T Consensus 124 h~dl~~~nili~~-~~~~~l~df~~~~ 149 (256)
T cd08529 124 HRDIKSLNLFLDA-YDNVKIGDLGVAK 149 (256)
T ss_pred cCCCCcceEEEeC-CCCEEEcccccce
Confidence 3799999999996 8999999999764
No 230
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=29.05 E-value=27 Score=32.06 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 132 ~dikp~Nili~~-~~~~kl~dfg~~~ 156 (288)
T cd07863 132 RDLKPENILVTS-GGQVKLADFGLAR 156 (288)
T ss_pred CCCCHHHEEECC-CCCEEECccCccc
Confidence 799999999986 8999999999774
No 231
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=29.00 E-value=26 Score=32.07 Aligned_cols=25 Identities=36% Similarity=0.531 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.-+|||.+-
T Consensus 125 ~dl~p~nil~~~-~~~~~l~dfg~~~ 149 (285)
T cd07861 125 RDLKPQNLLIDN-KGVIKLADFGLAR 149 (285)
T ss_pred cCCCHHHEEEcC-CCcEEECccccee
Confidence 899999999986 9999999999764
No 232
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=28.98 E-value=36 Score=30.43 Aligned_cols=28 Identities=21% Similarity=0.150 Sum_probs=24.1
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--+|-.|+||+++. +|.+.=+|||.+..
T Consensus 115 ~h~di~p~nili~~-~~~~~l~d~g~~~~ 142 (251)
T cd05041 115 IHRDLAARNCLVGE-NNVLKISDFGMSRE 142 (251)
T ss_pred ehhhcCcceEEEcC-CCcEEEeecccccc
Confidence 34899999999986 99999999998753
No 233
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=28.98 E-value=29 Score=33.63 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=22.8
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=+|-.|+|||++. +|.+.-+|||.+.
T Consensus 126 H~dlkp~Nili~~-~~~~kL~Dfg~a~ 151 (372)
T cd07853 126 HRDIKPGNLLVNS-NCVLKICDFGLAR 151 (372)
T ss_pred CCCCChHHEEECC-CCCEEecccccee
Confidence 3788899999996 8999999999774
No 234
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=28.85 E-value=31 Score=31.85 Aligned_cols=25 Identities=32% Similarity=0.509 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 126 ~dikp~Nill~~-~~~~kl~Dfg~~~ 150 (285)
T cd05631 126 RDLKPENILLDD-RGHIRISDLGLAV 150 (285)
T ss_pred CCCCHHHEEECC-CCCEEEeeCCCcE
Confidence 788899999985 8999999999763
No 235
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=28.75 E-value=1e+02 Score=28.02 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=23.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-+|+||+++. +|.+.=+|||.+..
T Consensus 130 h~~l~~~nili~~-~~~~~l~dfg~~~~ 156 (287)
T cd07838 130 HRDLKPQNILVTS-DGQVKIADFGLARI 156 (287)
T ss_pred eccCChhhEEEcc-CCCEEEeccCccee
Confidence 4899999999997 69999999998743
No 236
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=28.70 E-value=37 Score=32.36 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+.
T Consensus 128 ~dlkp~Nili~~-~~~~kL~Dfg~~~ 152 (333)
T cd06650 128 RDVKPSNILVNS-RGEIKLCDFGVSG 152 (333)
T ss_pred cCCChhhEEEcC-CCCEEEeeCCcch
Confidence 799999999986 8999999999874
No 237
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=28.69 E-value=30 Score=32.57 Aligned_cols=27 Identities=37% Similarity=0.564 Sum_probs=23.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
=||-.|+||+++. +|.+.=+|||.+..
T Consensus 121 H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 147 (318)
T cd05582 121 YRDLKPENILLDE-EGHIKLTDFGLSKE 147 (318)
T ss_pred cCCCCHHHeEECC-CCcEEEeeccCCcc
Confidence 3788999999986 89999999998753
No 238
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=28.57 E-value=27 Score=34.02 Aligned_cols=49 Identities=37% Similarity=0.620 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhc----cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 115 WLERRTNYTRSLAVMSMVGYLLG----LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 115 w~~~r~~F~~SlA~~Si~~yilg----lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
|-+.|.+|--+ -+.|.++|+-. --|-.++|+|+|+ +|++--.|||.|=+
T Consensus 265 FsE~RtRFYGa-EIvsAL~YLHs~~ivYRDlKLENLlLDk-DGHIKitDFGLCKE 317 (516)
T KOG0690|consen 265 FSEDRTRFYGA-EIVSALGYLHSRNIVYRDLKLENLLLDK-DGHIKITDFGLCKE 317 (516)
T ss_pred ccchhhhhhhH-HHHHHhhhhhhCCeeeeechhhhheecc-CCceEeeecccchh
Confidence 33455555433 35577888743 3477889999997 99999999999953
No 239
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=28.50 E-value=32 Score=32.75 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=23.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+|||++. +|.+.=+|||.+..
T Consensus 142 rdikp~Nil~~~-~~~~kl~Dfg~~~~ 167 (343)
T cd07878 142 RDLKPSNVAVNE-DCELRILDFGLARQ 167 (343)
T ss_pred ccCChhhEEECC-CCCEEEcCCcccee
Confidence 788999999986 89999999998754
No 240
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=28.38 E-value=27 Score=32.99 Aligned_cols=25 Identities=36% Similarity=0.570 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.-+|||.+-
T Consensus 120 ~dlkp~Nill~~-~~~~kl~Dfg~~~ 144 (318)
T cd05570 120 RDLKLDNVLLDS-EGHIKIADFGMCK 144 (318)
T ss_pred cCCCHHHeEECC-CCcEEecccCCCe
Confidence 788899999986 8999999999763
No 241
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=28.20 E-value=75 Score=30.05 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+|||++. +|.+.=+|||.+.
T Consensus 129 ~dlkp~Nili~~-~~~~kl~Dfg~a~ 153 (332)
T cd07857 129 RDLKPGNLLVNA-DCELKICDFGLAR 153 (332)
T ss_pred CCCCHHHeEEcC-CCCEEeCcCCCce
Confidence 888999999986 8999999999875
No 242
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=28.16 E-value=35 Score=30.76 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+.
T Consensus 129 h~dl~p~nil~~~-~~~~~l~d~~~~~ 154 (267)
T cd08224 129 HRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred cCCcChhhEEECC-CCcEEEeccceee
Confidence 3899999999986 8999999999764
No 243
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=28.15 E-value=27 Score=33.05 Aligned_cols=25 Identities=36% Similarity=0.522 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+.
T Consensus 125 rdlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05589 125 RDLKLDNLLLDT-EGFVKIADFGLCK 149 (324)
T ss_pred cCCCHHHeEECC-CCcEEeCcccCCc
Confidence 788999999996 8999999999764
No 244
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=28.00 E-value=84 Score=29.09 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.=+|||.+..
T Consensus 143 ~dlkp~Nill~~-~~~~kl~dfg~~~~ 168 (297)
T cd05089 143 RDLAARNVLVGE-NLASKIADFGLSRG 168 (297)
T ss_pred CcCCcceEEECC-CCeEEECCcCCCcc
Confidence 799999999986 88898899998753
No 245
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=27.92 E-value=33 Score=31.33 Aligned_cols=27 Identities=30% Similarity=0.413 Sum_probs=23.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
=+|-+|+||+++. +|.+.=+|||.+..
T Consensus 122 H~dl~p~ni~~~~-~~~~~l~dfg~~~~ 148 (286)
T cd07832 122 HRDLKPANLLISA-DGVLKIADFGLARL 148 (286)
T ss_pred cCCcCHHHEEEcC-CCcEEEeeeeeccc
Confidence 3799999999997 89999999998764
No 246
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=27.87 E-value=37 Score=30.47 Aligned_cols=26 Identities=19% Similarity=0.153 Sum_probs=22.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+||+++. +|.+.-+|||.+-
T Consensus 123 h~dl~p~ni~i~~-~~~~~l~d~g~~~ 148 (256)
T cd05112 123 HRDLAARNCLVGE-NQVVKVSDFGMTR 148 (256)
T ss_pred ccccccceEEEcC-CCeEEECCCccee
Confidence 3799999999985 8999999999764
No 247
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=27.72 E-value=47 Score=31.22 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=25.7
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+++.=+|-+|+|++++. .|+++=|||-++-
T Consensus 153 ~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg 182 (269)
T COG0510 153 LVPCHNDLNPGNLLLTD-KGGLFLIDWEYAG 182 (269)
T ss_pred eeeecCCCCccceEEcC-CCcEEEEecccCC
Confidence 56677999999999985 6999999998763
No 248
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=27.63 E-value=32 Score=31.06 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.-+|||.+.
T Consensus 130 ~dl~~~nil~~~-~~~~~l~d~g~~~ 154 (267)
T cd08228 130 RDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred CCCCHHHEEEcC-CCCEEECccccce
Confidence 789999999986 8999999999765
No 249
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=27.62 E-value=34 Score=31.51 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+.
T Consensus 128 H~dl~p~nil~~~-~~~~~l~dfg~~~ 153 (288)
T cd05583 128 YRDIKLENILLDS-EGHVVLTDFGLSK 153 (288)
T ss_pred ccCCCHHHeEECC-CCCEEEEECcccc
Confidence 3789999999986 8999999999753
No 250
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=27.54 E-value=42 Score=30.77 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+|||++. +|++.=+|||.+.
T Consensus 127 ~dlkp~nili~~-~~~~kl~dfg~~~ 151 (282)
T cd06643 127 RDLKAGNILFTL-DGDIKLADFGVSA 151 (282)
T ss_pred cCCCcccEEEcc-CCCEEEccccccc
Confidence 789999999986 8999999999774
No 251
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=27.49 E-value=1e+02 Score=28.40 Aligned_cols=25 Identities=24% Similarity=0.227 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 154 ~dlkp~Nili~~-~~~~~l~dfg~~~ 178 (296)
T cd05095 154 RDLATRNCLVGK-NYTIKIADFGMSR 178 (296)
T ss_pred ccCChheEEEcC-CCCEEeccCcccc
Confidence 788999999985 8999999999763
No 252
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=27.43 E-value=1.1e+02 Score=27.89 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++...+.+.=+|||.+-
T Consensus 133 ~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 133 NDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CCCCHHHEEEeCCCCeEEEecCccce
Confidence 78899999999855599999999764
No 253
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=27.43 E-value=35 Score=31.60 Aligned_cols=25 Identities=24% Similarity=0.198 Sum_probs=22.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
=+|-+|+||+++. +|.+.=+|||.+
T Consensus 152 H~dlkp~Nill~~-~~~~kl~dfg~~ 176 (295)
T cd05097 152 HRDLATRNCLVGN-HYTIKIADFGMS 176 (295)
T ss_pred ccccChhhEEEcC-CCcEEecccccc
Confidence 4799999999985 889999999976
No 254
>PHA00451 protein kinase
Probab=27.41 E-value=93 Score=29.45 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=39.3
Q ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHhccCCCCCCceEEEecCCeEEEEeccchhhhh
Q 017397 110 RTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEAS 167 (372)
Q Consensus 110 ~~~~~w~~~r~~F~~SlA~~Si~~yilglgDRH~~NIli~~~tG~v~hIDfg~~f~~~ 167 (372)
.++..|+.--..|+.+|-..-=+-|=+.-=|=|.+|||++. .|..+-.|= ..|...
T Consensus 164 ~d~~~~~~~~~~FIETCk~IRkFF~GIASFDmHSGNiMf~~-~g~p~ITDP-VSFS~d 219 (362)
T PHA00451 164 SDAAEEYPGSQEFIETCKMIRKFFYGIASFDMHSGNIMFDQ-DGVPYITDP-VSFSHD 219 (362)
T ss_pred CCHHhccCCchhHHHHHHHHHHHHhhhhcccccCCceeeCC-CCCeEecCC-ccccCc
Confidence 46777777777788887664444443444589999999996 898888775 556543
No 255
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=27.29 E-value=89 Score=28.75 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+||+++. +|.+.=+|||.+..
T Consensus 126 ~dikp~Nili~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05632 126 RDLKPENILLDD-YGHIRISDLGLAVK 151 (285)
T ss_pred cCCCHHHEEECC-CCCEEEecCCccee
Confidence 788999999986 78899999997753
No 256
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=27.29 E-value=34 Score=31.40 Aligned_cols=26 Identities=31% Similarity=0.534 Sum_probs=23.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+|||++. +|.+.=+|||.+.
T Consensus 118 H~dlkp~Nill~~-~~~~~l~dfg~~~ 143 (279)
T cd06619 118 HRDVKPSNMLVNT-RGQVKLCDFGVST 143 (279)
T ss_pred eCCCCHHHEEECC-CCCEEEeeCCcce
Confidence 3799999999986 9999999999775
No 257
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=27.24 E-value=33 Score=36.30 Aligned_cols=25 Identities=36% Similarity=0.574 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-|--++|||+|. .|++--+|||.|=
T Consensus 492 RDlKLdNiLLD~-eGh~kiADFGlcK 516 (694)
T KOG0694|consen 492 RDLKLDNLLLDT-EGHVKIADFGLCK 516 (694)
T ss_pred eecchhheEEcc-cCcEEeccccccc
Confidence 377799999997 9999999999994
No 258
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=27.20 E-value=37 Score=31.00 Aligned_cols=27 Identities=30% Similarity=0.475 Sum_probs=23.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
=||-+|+||+++. +|.+.=+|||.+..
T Consensus 123 H~dl~p~nil~~~-~~~~~l~dfg~~~~ 149 (286)
T cd07847 123 HRDVKPENILITK-QGQIKLCDFGFARI 149 (286)
T ss_pred ecCCChhhEEEcC-CCcEEECcccccee
Confidence 3899999999986 89999999998763
No 259
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=26.79 E-value=50 Score=29.32 Aligned_cols=29 Identities=34% Similarity=0.502 Sum_probs=24.4
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+--||-+|+||+++. +|.+.=+|||..-.
T Consensus 114 ~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~ 142 (250)
T cd05123 114 IIYRDLKPENILLDA-DGHIKLTDFGLAKE 142 (250)
T ss_pred ceecCCCcceEEEcC-CCcEEEeecCccee
Confidence 455899999999986 89999999997743
No 260
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=26.33 E-value=44 Score=30.41 Aligned_cols=25 Identities=20% Similarity=0.062 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.++
T Consensus 123 ~dikp~nil~~~-~~~~~l~Dfg~~~ 147 (268)
T cd05086 123 SDLALRNCFLTS-DLTVKVGDYGIGP 147 (268)
T ss_pred cCCccceEEEcC-CccEEeccccccc
Confidence 688999999986 8999999999865
No 261
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=26.32 E-value=48 Score=33.18 Aligned_cols=29 Identities=24% Similarity=0.225 Sum_probs=24.1
Q ss_pred HHhccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 134 YLLGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 134 yilglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
..|-=||-|++|||+.. +.+.-|||-++|
T Consensus 223 ~~l~HgDl~~gni~~~~--~~~~viD~E~a~ 251 (401)
T PRK09550 223 EALLHGDLHTGSIFVTE--EETKVIDPEFAF 251 (401)
T ss_pred CceeeccCCcccEEeeC--CCcEEEeccccc
Confidence 34778999999999974 469999998776
No 262
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=26.27 E-value=37 Score=31.29 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+.
T Consensus 121 ~dlkp~Nili~~-~~~~~l~dfg~~~ 145 (280)
T cd05608 121 RDLKPENVLLDN-DGNVRISDLGLAV 145 (280)
T ss_pred CCCCHHHEEECC-CCCEEEeeCccce
Confidence 688899999986 8999999999875
No 263
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=26.27 E-value=37 Score=32.32 Aligned_cols=25 Identities=36% Similarity=0.805 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+.
T Consensus 126 rDlkp~Nili~~-~~~~kL~DfG~a~ 150 (332)
T cd05623 126 RDIKPDNILMDM-NGHIRLADFGSCL 150 (332)
T ss_pred cCCCHHHEEECC-CCCEEEeecchhe
Confidence 788999999985 9999999999874
No 264
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=26.24 E-value=37 Score=30.76 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=23.3
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
--+|-+|+||+++. +|.+.=+|||.+.
T Consensus 129 ~H~dlkp~Nili~~-~~~~kl~dfg~~~ 155 (268)
T cd05063 129 VHRDLAARNILVNS-NLECKVSDFGLSR 155 (268)
T ss_pred eccccchhhEEEcC-CCcEEECCCccce
Confidence 35799999999985 8999999999774
No 265
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=26.24 E-value=1.1e+02 Score=31.62 Aligned_cols=26 Identities=35% Similarity=0.673 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+|||++. +|.+.-+|||.+..
T Consensus 333 rDLKp~NILl~~-~~~~kL~DFGla~~ 358 (507)
T PLN03224 333 RDIKPENLLVTV-DGQVKIIDFGAAVD 358 (507)
T ss_pred CCCchHhEEECC-CCcEEEEeCcCccc
Confidence 788999999986 79999999998753
No 266
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=26.08 E-value=38 Score=30.93 Aligned_cols=25 Identities=24% Similarity=0.137 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+.
T Consensus 143 ~dlkp~Nil~~~-~~~~~l~dfg~~~ 167 (277)
T cd05062 143 RDLAARNCMVAE-DFTVKIGDFGMTR 167 (277)
T ss_pred CCcchheEEEcC-CCCEEECCCCCcc
Confidence 788999999996 8999999999764
No 267
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=25.80 E-value=1.1e+02 Score=27.82 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.-+|||.+.
T Consensus 136 ~dikp~nili~~-~~~~kl~dfgl~~ 160 (270)
T cd05047 136 RDLAARNILVGE-NYVAKIADFGLSR 160 (270)
T ss_pred cccccceEEEcC-CCeEEECCCCCcc
Confidence 788999999986 8999999999764
No 268
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=25.71 E-value=46 Score=30.06 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=21.1
Q ss_pred CCCCCCceEEEecCC-----eEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSG-----KILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG-----~v~hIDfg~~f 164 (372)
||-+|+||+++. ++ .+.-+|||.+-
T Consensus 130 ~dl~p~nil~~~-~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 130 RDLAARNCLVSE-KGYDADRVVKIGDFGLAR 159 (269)
T ss_pred CCCChheEEEec-CCCCCCcceEECCccccc
Confidence 789999999997 55 78889998763
No 269
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=25.70 E-value=90 Score=28.94 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=23.5
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-.|+||+++. +|.+.=+|||.+..
T Consensus 139 H~dLkp~Nill~~-~~~~kl~dfg~~~~ 165 (296)
T cd06654 139 HRDIKSDNILLGM-DGSVKLTDFGFCAQ 165 (296)
T ss_pred cCCCCHHHEEEcC-CCCEEECccccchh
Confidence 4899999999986 89999999997753
No 270
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=25.62 E-value=62 Score=29.12 Aligned_cols=28 Identities=32% Similarity=0.496 Sum_probs=24.4
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+--||-+|+||+++. +|.+.=+|||..-
T Consensus 114 ~~h~dl~~~nilv~~-~~~~~l~df~~~~ 141 (262)
T cd05572 114 IIYRDLKPENLLLDS-NGYVKLVDFGFAK 141 (262)
T ss_pred cccCCCCHHHEEEcC-CCCEEEeeCCccc
Confidence 556899999999986 8999999999774
No 271
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=25.56 E-value=37 Score=30.55 Aligned_cols=26 Identities=35% Similarity=0.553 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
||-+|+||+++. +|.+.=+|||.+..
T Consensus 125 ~dl~~~ni~~~~-~~~~~l~d~g~~~~ 150 (265)
T cd06605 125 RDVKPSNILVNS-RGQIKLCDFGVSGQ 150 (265)
T ss_pred CCCCHHHEEECC-CCCEEEeecccchh
Confidence 788999999997 99999999997753
No 272
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=25.44 E-value=1.2e+02 Score=28.34 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. +|.+.=+|||.+..
T Consensus 158 ~dlkp~Nill~~-~~~~kL~Dfg~~~~ 183 (314)
T cd05099 158 RDLAARNVLVTE-DNVMKIADFGLARG 183 (314)
T ss_pred ccccceeEEEcC-CCcEEEcccccccc
Confidence 788999999986 89999999998853
No 273
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=25.39 E-value=1.5e+02 Score=28.32 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.0
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 203 ~dikp~Nil~~~-~~~~kl~dfg~~~ 227 (343)
T cd05103 203 RDLAARNILLSE-NNVVKICDFGLAR 227 (343)
T ss_pred CCCccCeEEEcC-CCcEEEEeccccc
Confidence 688899999985 8999999999764
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=25.34 E-value=48 Score=30.08 Aligned_cols=25 Identities=28% Similarity=0.324 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+.
T Consensus 132 ~dl~~~nil~~~-~~~~~l~d~~~~~ 156 (272)
T cd06629 132 RDLKADNLLVDA-DGICKISDFGISK 156 (272)
T ss_pred cCCChhhEEEcC-CCeEEEeeccccc
Confidence 799999999985 9999999999875
No 275
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=25.29 E-value=35 Score=32.18 Aligned_cols=28 Identities=25% Similarity=0.357 Sum_probs=24.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-||-+|+|||++. +|.+.=+|||.+...
T Consensus 126 H~dlkp~nili~~-~~~~~L~dfg~~~~~ 153 (330)
T cd07834 126 HRDLKPSNILVNS-NCDLKICDFGLARGV 153 (330)
T ss_pred cCCCCHHHEEEcC-CCCEEEcccCceEee
Confidence 4899999999997 799999999988643
No 276
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=25.29 E-value=42 Score=30.88 Aligned_cols=27 Identities=30% Similarity=0.375 Sum_probs=23.2
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
--+|-+|+||+++. +|.+.=+|||.+-
T Consensus 125 ~H~dlkp~Nil~~~-~~~~~l~Dfg~~~ 151 (291)
T cd07870 125 LHRDLKPQNLLISY-LGELKLADFGLAR 151 (291)
T ss_pred ccCCCChHHEEEcC-CCcEEEecccccc
Confidence 34899999999986 8999999999764
No 277
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=25.05 E-value=43 Score=30.22 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+-
T Consensus 137 ~dlkp~Nil~~~-~~~~kl~dfg~~~ 161 (273)
T cd05035 137 RDLAARNCMLRE-DMTVCVADFGLSK 161 (273)
T ss_pred cccchheEEECC-CCeEEECCcccee
Confidence 688999999986 8999999999764
No 278
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=25.01 E-value=1.4e+02 Score=27.97 Aligned_cols=26 Identities=27% Similarity=0.471 Sum_probs=22.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
||-+|+||+++. .|.+.=+|||.+..
T Consensus 149 ~dL~p~Nil~~~-~~~~kl~dfg~~~~ 174 (317)
T cd06635 149 RDIKAGNILLTE-PGQVKLADFGSASI 174 (317)
T ss_pred CCCCcccEEECC-CCCEEEecCCCccc
Confidence 899999999986 89999999997753
No 279
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=24.98 E-value=44 Score=34.25 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=21.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. +|.+.-+|||.+
T Consensus 167 rDLKP~NILl~~-~~~vkL~DFGls 190 (496)
T PTZ00283 167 RDIKSANILLCS-NGLVKLGDFGFS 190 (496)
T ss_pred CCCCHHHEEEeC-CCCEEEEecccC
Confidence 688899999996 899999999976
No 280
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=24.92 E-value=41 Score=30.05 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=23.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+..
T Consensus 116 H~di~~~nil~~~-~~~~~l~dfg~~~~ 142 (265)
T cd05579 116 HRDLKPDNILIDS-NGHLKLTDFGLSKV 142 (265)
T ss_pred cCCCCHHHeEEcC-CCCEEEEecccchh
Confidence 3899999999996 89999999998764
No 281
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=24.89 E-value=1.1e+02 Score=28.11 Aligned_cols=27 Identities=26% Similarity=0.502 Sum_probs=23.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-.|+|||++. +|.+.=+|||.+..
T Consensus 120 H~dikp~Nil~~~-~~~~~l~dfg~~~~ 146 (279)
T cd05633 120 YRDLKPANILLDE-HGHVRISDLGLACD 146 (279)
T ss_pred CCCCCHHHEEECC-CCCEEEccCCccee
Confidence 4788999999985 89999999998753
No 282
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=24.87 E-value=44 Score=30.23 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+-
T Consensus 119 ~dlkp~nil~~~-~~~~kl~dfg~~~ 143 (257)
T cd05115 119 RDLAARNVLLVN-QHYAKISDFGLSK 143 (257)
T ss_pred cccchheEEEcC-CCcEEeccCCccc
Confidence 589999999986 8888889999763
No 283
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=24.86 E-value=40 Score=30.95 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.=+|||.+..
T Consensus 124 ~dlkp~Nill~~-~~~~kl~Dfg~~~~ 149 (287)
T cd07848 124 RDIKPENLLISH-NDVLKLCDFGFARN 149 (287)
T ss_pred CCCCHHHEEEcC-CCcEEEeeccCccc
Confidence 688899999985 89999999998753
No 284
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=24.74 E-value=43 Score=31.20 Aligned_cols=26 Identities=27% Similarity=0.501 Sum_probs=23.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-.|+||+++. +|.+.=+|||.+.
T Consensus 140 H~dl~p~Nill~~-~~~~kL~dfg~~~ 165 (297)
T cd06659 140 HRDIKSDSILLTL-DGRVKLSDFGFCA 165 (297)
T ss_pred cCCCCHHHeEEcc-CCcEEEeechhHh
Confidence 3799999999986 8999999999774
No 285
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=24.65 E-value=35 Score=30.23 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=25.1
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
+--||-+|+||+++. .|.+.=+|||.+...
T Consensus 122 ~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 151 (260)
T cd06606 122 IVHRDIKGANILVDS-DGVVKLADFGCAKRL 151 (260)
T ss_pred ccccCCCHHHEEEcC-CCCEEEcccccEEec
Confidence 345899999999997 899999999987643
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=24.60 E-value=44 Score=30.54 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=21.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+|||++. .|.+.=+|||.+
T Consensus 133 ~dlkp~Nil~~~-~~~~kL~dfG~~ 156 (279)
T cd05109 133 RDLAARNVLVKS-PNHVKITDFGLA 156 (279)
T ss_pred cccccceEEEcC-CCcEEECCCCce
Confidence 899999999975 888999999976
No 287
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=24.59 E-value=48 Score=30.40 Aligned_cols=25 Identities=20% Similarity=0.279 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.-+|||.+-
T Consensus 133 ~dlkp~nili~~-~~~~kl~Dfg~~~ 157 (279)
T cd05111 133 RNLAARNILLKS-DSIVQIADFGVAD 157 (279)
T ss_pred cccCcceEEEcC-CCcEEEcCCccce
Confidence 688899999986 8999999999773
No 288
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=24.50 E-value=52 Score=29.64 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=22.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+||+++. +|.+.=+|||.+.
T Consensus 125 H~di~p~Nili~~-~~~~~l~dfg~~~ 150 (260)
T cd05070 125 HRDLRSANILVGD-GLVCKIADFGLAR 150 (260)
T ss_pred cCCCccceEEEeC-CceEEeCCceeee
Confidence 3788999999986 8899899999874
No 289
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=24.47 E-value=40 Score=31.43 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=22.1
Q ss_pred CCCCCCceEEE---ecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLH---RYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~---~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||+. ..+|.+.-+|||.+-
T Consensus 132 ~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 132 RDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 78899999994 457899999999873
No 290
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=24.44 E-value=37 Score=30.43 Aligned_cols=27 Identities=33% Similarity=0.489 Sum_probs=23.1
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+..
T Consensus 123 H~~l~~~ni~~~~-~~~~~l~df~~~~~ 149 (264)
T cd06623 123 HRDIKPSNLLINS-KGEVKIADFGISKV 149 (264)
T ss_pred cCCCCHHHEEECC-CCCEEEccCcccee
Confidence 4789999999986 89999999997753
No 291
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=24.36 E-value=50 Score=29.44 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=24.2
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--||-+|+||+++. +|.+.=+|||.+..
T Consensus 121 ~H~dl~~~ni~~~~-~~~~~l~dfg~~~~ 148 (256)
T cd06612 121 IHRDIKAGNILLNE-EGQAKLADFGVSGQ 148 (256)
T ss_pred ccCCCCcceEEECC-CCcEEEcccccchh
Confidence 34899999999996 89999999998764
No 292
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=24.28 E-value=47 Score=30.64 Aligned_cols=24 Identities=25% Similarity=0.189 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-+|+||+++. +|.+.=+|||.+
T Consensus 143 ~dikp~nili~~-~~~~~L~Dfg~~ 166 (288)
T cd05061 143 RDLAARNCMVAH-DFTVKIGDFGMT 166 (288)
T ss_pred CCCChheEEEcC-CCcEEECcCCcc
Confidence 788999999996 899999999975
No 293
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=24.25 E-value=42 Score=29.81 Aligned_cols=28 Identities=29% Similarity=0.293 Sum_probs=23.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
--||-+|+||+++. +|.+.=+|||.+..
T Consensus 125 ~H~dl~~~nil~~~-~~~~~l~d~~~~~~ 152 (258)
T cd08215 125 LHRDIKPQNIFLTS-NGLVKLGDFGISKV 152 (258)
T ss_pred ecccCChHHeEEcC-CCcEEECCccceee
Confidence 34799999999986 89999999998753
No 294
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=24.18 E-value=42 Score=32.05 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=23.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
||-.|+||+++. +|.+.=+|||.+..
T Consensus 141 ~dlkp~NIll~~-~~~~kL~dfg~~~~ 166 (342)
T cd07879 141 RDLKPGNLAVNE-DCELKILDFGLARH 166 (342)
T ss_pred CCCCHHHEEECC-CCCEEEeeCCCCcC
Confidence 789999999996 89999999998753
No 295
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=24.06 E-value=51 Score=29.88 Aligned_cols=25 Identities=20% Similarity=0.190 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. .|.+.=+|||.+.
T Consensus 126 ~dl~p~Nill~~-~~~~~L~dfg~~~ 150 (262)
T cd05071 126 RDLRAANILVGE-NLVCKVADFGLAR 150 (262)
T ss_pred cccCcccEEEcC-CCcEEeccCCcee
Confidence 788999999986 8999999999874
No 296
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=23.90 E-value=51 Score=33.20 Aligned_cols=26 Identities=42% Similarity=0.613 Sum_probs=22.8
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-|-.++|+|+|. .|+|--.|||.|=+
T Consensus 474 RDLKLDNvmLd~-eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 474 RDLKLDNVMLDS-EGHIKIADFGMCKE 499 (683)
T ss_pred eeccccceEecc-CCceEeeecccccc
Confidence 467899999997 99999999999854
No 297
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=23.78 E-value=45 Score=30.64 Aligned_cols=25 Identities=20% Similarity=0.219 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||...
T Consensus 133 ~dlkp~Nil~~~-~~~~~l~dfg~~~ 157 (284)
T cd05079 133 RDLAARNVLVES-EHQVKIGDFGLTK 157 (284)
T ss_pred cccchheEEEcC-CCCEEECCCcccc
Confidence 699999999986 8999999999764
No 298
>PRK06148 hypothetical protein; Provisional
Probab=23.61 E-value=58 Score=36.74 Aligned_cols=27 Identities=30% Similarity=0.487 Sum_probs=21.6
Q ss_pred cCCCCCCceEEEecC-CeEE-EEeccchh
Q 017397 138 LGDRHPSNLMLHRYS-GKIL-HIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~t-G~v~-hIDfg~~f 164 (372)
=||-|++|||++... +++. -||||.+.
T Consensus 207 HgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 207 HNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred CCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 389999999999632 2676 89999884
No 299
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=23.61 E-value=53 Score=29.21 Aligned_cols=29 Identities=17% Similarity=0.082 Sum_probs=24.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
--||-.|+||+++. +|.+.=+|||.+...
T Consensus 127 ~H~di~p~nili~~-~~~~~l~dfg~~~~~ 155 (262)
T cd00192 127 VHRDLAARNCLVGE-DLVVKISDFGLSRDV 155 (262)
T ss_pred ccCccCcceEEECC-CCcEEEccccccccc
Confidence 34799999999996 799999999988643
No 300
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=23.57 E-value=48 Score=30.34 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=22.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. ++.+.=+|||.+..
T Consensus 148 ~dlkp~nili~~-~~~~kl~dfg~~~~ 173 (283)
T cd05090 148 KDLAARNILIGE-QLHVKISDLGLSRE 173 (283)
T ss_pred hccccceEEEcC-CCcEEecccccccc
Confidence 688899999996 88899999998753
No 301
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=23.57 E-value=57 Score=29.72 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=24.1
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+-=||-+|+||+++. +|.+.=+|||...
T Consensus 120 i~H~dl~~~ni~i~~-~~~~~l~d~~~~~ 147 (283)
T cd07830 120 FFHRDLKPENLLVSG-PEVVKIADFGLAR 147 (283)
T ss_pred cccCCCChhhEEEcC-CCCEEEeecccce
Confidence 445899999999996 9999999999774
No 302
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=23.53 E-value=38 Score=32.48 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=23.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-.|+||+++. +|.+.-+|||.+..
T Consensus 141 H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 167 (353)
T cd07850 141 HRDLKPSNIVVKS-DCTLKILDFGLART 167 (353)
T ss_pred eCCCCHHHEEECC-CCCEEEccCcccee
Confidence 3788999999986 89999999998854
No 303
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=23.50 E-value=49 Score=30.19 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+||+++. +|.+.=+|||.+.
T Consensus 148 ~dlkp~Nil~~~-~~~~~L~dfg~~~ 172 (283)
T cd05048 148 RDLAARNCLVGE-GLTVKISDFGLSR 172 (283)
T ss_pred cccccceEEEcC-CCcEEECCCccee
Confidence 699999999986 8888888999764
No 304
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=23.42 E-value=60 Score=30.29 Aligned_cols=26 Identities=27% Similarity=0.464 Sum_probs=22.8
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=.|||.+.
T Consensus 138 H~dl~p~nIl~~~-~~~~kL~dfg~~~ 163 (307)
T cd06607 138 HRDIKAGNILLTE-PGTVKLADFGSAS 163 (307)
T ss_pred ecCCCcccEEECC-CCCEEEeecCcce
Confidence 3789999999986 8999999999774
No 305
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=23.36 E-value=46 Score=30.51 Aligned_cols=25 Identities=44% Similarity=0.630 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+-
T Consensus 132 ~dlkp~Nil~~~-~~~~kl~dfg~~~ 156 (288)
T cd06616 132 RDVKPSNILLDR-NGNIKLCDFGISG 156 (288)
T ss_pred cCCCHHHEEEcc-CCcEEEeecchhH
Confidence 799999999986 8999999999764
No 306
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=23.06 E-value=1.3e+02 Score=28.44 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=23.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+--+|||.+..
T Consensus 131 ~dl~p~nill~~-~~~~kl~d~g~~~~ 156 (337)
T cd07852 131 RDLKPSNILLNS-DCRVKLADFGLARS 156 (337)
T ss_pred CCCCHHHEEEcC-CCcEEEeeccchhc
Confidence 899999999996 99999999997753
No 307
>PF12095 DUF3571: Protein of unknown function (DUF3571); InterPro: IPR021954 This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 85 to 97 amino acids in length. ; PDB: 2KRX_A.
Probab=23.02 E-value=40 Score=25.76 Aligned_cols=28 Identities=32% Similarity=0.281 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHhhCcchhhhhccccc
Q 017397 342 LSVKLQVQKLIIQATSHENLCQNYVGWC 369 (372)
Q Consensus 342 lsv~~qV~~LI~~Atd~~nL~~m~~GW~ 369 (372)
-|+++|++.|++.|-+.+.=--.|.-|+
T Consensus 51 ~s~~~qa~~Lldt~CeLeigpg~~lQWy 78 (83)
T PF12095_consen 51 SSVEEQAQYLLDTACELEIGPGGYLQWY 78 (83)
T ss_dssp --HHHHHHHHHHH---EEEETTEEEEEE
T ss_pred CCHHHHHHHHHHhceeeecCCCCEEEEE
Confidence 3799999999999999887555566665
No 308
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=23.01 E-value=54 Score=29.66 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=23.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
||-.|+||+++. +|.+.=+|||.+...
T Consensus 128 ~dlkp~nil~~~-~~~~kl~df~~~~~~ 154 (263)
T cd05052 128 RDLAARNCLVGE-NHLVKVADFGLSRLM 154 (263)
T ss_pred cccCcceEEEcC-CCcEEeCCCcccccc
Confidence 899999999985 999999999988643
No 309
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=22.99 E-value=1.5e+02 Score=28.71 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=21.4
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. .+.+.=+|||.+-
T Consensus 238 ~Dlkp~Nill~~-~~~~kl~DfG~a~ 262 (375)
T cd05104 238 RDLAARNILLTH-GRITKICDFGLAR 262 (375)
T ss_pred cCCchhhEEEEC-CCcEEEecCccce
Confidence 688899999986 7888888999874
No 310
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=22.91 E-value=42 Score=30.88 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+-
T Consensus 154 ~dl~p~nil~~~-~~~~~l~dfg~~~ 178 (288)
T cd05050 154 RDLATRNCLVGE-NMVVKIADFGLSR 178 (288)
T ss_pred ccccHhheEecC-CCceEECccccce
Confidence 789999999986 8999999999764
No 311
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=22.82 E-value=40 Score=30.66 Aligned_cols=29 Identities=24% Similarity=0.257 Sum_probs=24.6
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
--||-+|+||+++. +|.+.=+|||.+...
T Consensus 122 ~h~dl~p~nil~~~-~~~~~l~d~g~~~~~ 150 (287)
T cd07840 122 LHRDIKGSNILINN-DGVLKLADFGLARPY 150 (287)
T ss_pred eeccCcHHHeEEcC-CCCEEEccccceeec
Confidence 34899999999996 999999999987643
No 312
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=22.50 E-value=1.3e+02 Score=26.56 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
||-.|+||+++. +|.+.=+|||.+..
T Consensus 126 ~dl~~~ni~~~~-~~~~kl~d~~~~~~ 151 (258)
T cd06632 126 RDIKGANILVDT-NGVVKLADFGMAKQ 151 (258)
T ss_pred CCCCHHHEEECC-CCCEEEccCcccee
Confidence 789999999986 89999999997753
No 313
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=22.30 E-value=1.7e+02 Score=25.89 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=21.5
Q ss_pred CCCCCCceEEEecCC-------eEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSG-------KILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG-------~v~hIDfg~~f~ 165 (372)
+|-.|+|||++. .| .+.=.|||.+..
T Consensus 125 ~dlkp~Nill~~-~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 125 GNVCGKNILVAR-YGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred ccCccceEEEec-CccccCCceeEEeCCCCcccc
Confidence 899999999997 55 678889997764
No 314
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=22.25 E-value=44 Score=30.55 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=23.4
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-||-+|+||+++. +|.+.=+|||.+..
T Consensus 118 H~di~p~Nil~~~-~~~~~l~dfg~~~~ 144 (277)
T cd05577 118 YRDLKPENVLLDD-HGNVRISDLGLAVE 144 (277)
T ss_pred cCCCCHHHEEECC-CCCEEEccCcchhh
Confidence 4788999999986 89999999998754
No 315
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=22.17 E-value=55 Score=31.78 Aligned_cols=42 Identities=29% Similarity=0.477 Sum_probs=29.6
Q ss_pred hccCCC--CCCceEEEecCCeEEEEeccchhhhhcCCCCCCCCCCeeecHhhHH
Q 017397 136 LGLGDR--HPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVK 187 (372)
Q Consensus 136 lglgDR--H~~NIli~~~tG~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~ 187 (372)
.||+-| -|+||++.. ++.+=--|||++= .|.+-||+||-++.
T Consensus 137 ~~IihRdLkPsnivv~~-~~~lKi~dfg~ar---------~e~~~~~mtpyVvt 180 (369)
T KOG0665|consen 137 AGIIHRDLKPSNIVVNS-DCTLKILDFGLAR---------TEDTDFMMTPYVVT 180 (369)
T ss_pred cceeecccCcccceecc-hhheeeccchhhc---------ccCcccccCchhhe
Confidence 455555 899999975 8888888998763 24444777776654
No 316
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=22.14 E-value=48 Score=29.93 Aligned_cols=27 Identities=22% Similarity=0.236 Sum_probs=23.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-+|+||+++. +|.+.=+|||.+..
T Consensus 129 H~dl~p~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd08229 129 HRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred cCCCCHHHEEEcC-CCCEEECcchhhhc
Confidence 4799999999986 89999999997653
No 317
>PRK10593 hypothetical protein; Provisional
Probab=22.10 E-value=62 Score=30.70 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=20.0
Q ss_pred ccCCCCCCceEEEecCCe-EEEEecc
Q 017397 137 GLGDRHPSNLMLHRYSGK-ILHIDFG 161 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~-v~hIDfg 161 (372)
==||=|++|+|++..+|. .+-||..
T Consensus 196 lHGDlw~gNvl~~~~~~~i~~liDPa 221 (297)
T PRK10593 196 VHGNFTLRSMLKDPRSDQLLAMLNPG 221 (297)
T ss_pred EeCCCCcccEEECCCCCceEEEECch
Confidence 338999999999976676 6778876
No 318
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=22.07 E-value=1.4e+02 Score=31.45 Aligned_cols=44 Identities=25% Similarity=0.455 Sum_probs=33.3
Q ss_pred HHHHHhHHHHHHHHHHhcc--CCCCCCceEEEe-cCCeEEEEeccch
Q 017397 120 TNYTRSLAVMSMVGYLLGL--GDRHPSNLMLHR-YSGKILHIDFGDC 163 (372)
Q Consensus 120 ~~F~~SlA~~Si~~yilgl--gDRH~~NIli~~-~tG~v~hIDfg~~ 163 (372)
+.|+.|+...=.+=+-+|| +|--|+||||.. ..-+|==||||..
T Consensus 292 r~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 292 RKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred HHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccc
Confidence 4588888776666666776 799999999963 3447888999975
No 319
>PHA03210 serine/threonine kinase US3; Provisional
Probab=21.96 E-value=49 Score=33.91 Aligned_cols=40 Identities=33% Similarity=0.493 Sum_probs=28.8
Q ss_pred HHHhHHHHHHHHHHh--cc--CCCCCCceEEEecCCeEEEEeccchh
Q 017397 122 YTRSLAVMSMVGYLL--GL--GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 122 F~~SlA~~Si~~yil--gl--gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
++.+++ ..+.|+= || +|-.|+|||++. .|.+.=+|||.+-
T Consensus 272 i~~ql~--~aL~yLH~~gIiHrDLKP~NILl~~-~~~vkL~DFGla~ 315 (501)
T PHA03210 272 IMKQLL--CAVEYIHDKKLIHRDIKLENIFLNC-DGKIVLGDFGTAM 315 (501)
T ss_pred HHHHHH--HHHHHHHhCCeecCCCCHHHEEECC-CCCEEEEeCCCce
Confidence 444443 3445543 33 588899999986 8999999999873
No 320
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=21.83 E-value=47 Score=30.46 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=22.2
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
-||-.|+||+++. +|.+.-+|||.+
T Consensus 145 H~dlkp~nil~~~-~~~~kL~dfg~~ 169 (280)
T cd05092 145 HRDLATRNCLVGQ-GLVVKIGDFGMS 169 (280)
T ss_pred cccccHhhEEEcC-CCCEEECCCCce
Confidence 3789999999985 899999999976
No 321
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=21.83 E-value=53 Score=29.83 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=22.8
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-.|+||+++. +|.+.=+|||.+-
T Consensus 132 H~dl~p~nil~~~-~~~~~l~dfg~~~ 157 (284)
T cd05038 132 HRDLAARNILVES-EDLVKISDFGLAK 157 (284)
T ss_pred cCCCCHHhEEEcC-CCCEEEccccccc
Confidence 3899999999996 7999999998774
No 322
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=21.82 E-value=44 Score=30.17 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-+|+||+++. +|.+.=+|||.+-
T Consensus 129 H~di~p~nil~~~-~~~~~l~dfg~~~ 154 (267)
T cd06628 129 HRDIKGANILVDN-KGGIKISDFGISK 154 (267)
T ss_pred cccCCHHHEEEcC-CCCEEecccCCCc
Confidence 3799999999985 8999999999764
No 323
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=21.81 E-value=1.3e+02 Score=27.59 Aligned_cols=26 Identities=35% Similarity=0.514 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-.|+||+++. +|.+.=+|||.+..
T Consensus 126 ~dlkp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05605 126 RDLKPENILLDD-YGHIRISDLGLAVE 151 (285)
T ss_pred cCCCHHHEEECC-CCCEEEeeCCCcee
Confidence 788999999986 79999999998753
No 324
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=21.79 E-value=56 Score=29.47 Aligned_cols=25 Identities=24% Similarity=0.288 Sum_probs=22.0
Q ss_pred cCCCCCCceEEEecCCeEEEEeccch
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
=+|-+|+||+++. +|.+.=+|||..
T Consensus 123 H~dl~p~nili~~-~~~~kl~d~g~~ 147 (256)
T cd05113 123 HRDLAARNCLVDD-QGCVKVSDFGLS 147 (256)
T ss_pred ccccCcceEEEcC-CCCEEECCCccc
Confidence 3789999999985 899999999875
No 325
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=21.67 E-value=62 Score=29.63 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=21.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+||+++. +|.+.=+|||.+-
T Consensus 131 ~dlkp~Nili~~-~~~~~l~dfg~~~ 155 (283)
T cd05080 131 RDLAARNVLLDN-DRLVKIGDFGLAK 155 (283)
T ss_pred cccChheEEEcC-CCcEEEeeccccc
Confidence 688899999986 7999999999763
No 326
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=21.67 E-value=1.3e+02 Score=26.85 Aligned_cols=28 Identities=25% Similarity=0.430 Sum_probs=24.3
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
-||-.|+||+++. .|.+.=+|||.+...
T Consensus 123 h~dl~~~nil~~~-~~~~~l~d~~~~~~~ 150 (258)
T cd05578 123 HRDIKPDNILLDE-QGHVHITDFNIATKV 150 (258)
T ss_pred ccCCCHHHeEEcC-CCCEEEeeccccccc
Confidence 4899999999996 899999999988643
No 327
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=21.55 E-value=50 Score=30.12 Aligned_cols=29 Identities=28% Similarity=0.460 Sum_probs=24.6
Q ss_pred hccCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 136 LGLGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 136 lglgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+--||-+|+||+++. +|.+.-+|||.+..
T Consensus 121 i~h~dl~p~ni~~~~-~~~~~l~d~g~~~~ 149 (284)
T cd07836 121 VLHRDLKPQNLLINK-RGELKLADFGLARA 149 (284)
T ss_pred eeeCCCCHHHEEECC-CCcEEEeecchhhh
Confidence 345899999999985 99999999998853
No 328
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=21.43 E-value=57 Score=29.80 Aligned_cols=26 Identities=27% Similarity=0.402 Sum_probs=22.6
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccch
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
--+|-+|+||+++. +|.+.=+|||..
T Consensus 123 ~h~dl~p~Ni~i~~-~~~~~l~dfg~~ 148 (277)
T cd06641 123 IHRDIKAANVLLSE-HGEVKLADFGVA 148 (277)
T ss_pred ecCCCCHHhEEECC-CCCEEEeecccc
Confidence 34799999999985 899999999965
No 329
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=21.34 E-value=49 Score=30.92 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=21.9
Q ss_pred CCCCCCceEEE---ecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLH---RYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~---~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++ ..+|.+.=+|||.+-
T Consensus 132 rDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 132 RDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 68889999994 357899999999874
No 330
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=21.30 E-value=58 Score=29.55 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+-
T Consensus 124 ~dlkp~nil~~~-~~~~kL~dfg~~~ 148 (269)
T cd05087 124 SDLALRNCLLTA-DLTVKIGDYGLSH 148 (269)
T ss_pred cccCcceEEEcC-CCcEEECCccccc
Confidence 788999999986 8999999999774
No 331
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=21.28 E-value=50 Score=29.72 Aligned_cols=25 Identities=20% Similarity=0.197 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-+|+||+++. +|.+.=+|||.+-
T Consensus 126 ~dl~p~ni~i~~-~~~~~l~dfg~~~ 150 (260)
T cd05067 126 RDLRAANILVSE-TLCCKIADFGLAR 150 (260)
T ss_pred ccccHHhEEEcC-CCCEEEccCccee
Confidence 788999999996 8999999999774
No 332
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=21.21 E-value=52 Score=30.06 Aligned_cols=25 Identities=36% Similarity=0.554 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+-
T Consensus 124 ~~l~p~nill~~-~~~~~l~dfg~~~ 148 (284)
T cd07860 124 RDLKPQNLLINT-EGAIKLADFGLAR 148 (284)
T ss_pred CCCCHHHEEECC-CCCEEEeeccchh
Confidence 899999999996 8999999999764
No 333
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=21.20 E-value=51 Score=29.62 Aligned_cols=26 Identities=31% Similarity=0.529 Sum_probs=22.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
=||-+|+||+++. +|.+.=+|||...
T Consensus 120 H~dl~p~nil~~~-~~~~~l~dfg~~~ 145 (260)
T cd05611 120 HRDIKPENLLIDQ-TGHLKLTDFGLSR 145 (260)
T ss_pred cCCCCHHHeEECC-CCcEEEeecccce
Confidence 4788999999986 8999999999764
No 334
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=21.17 E-value=50 Score=29.86 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=22.7
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-.|+||+++. +|.+.=+|||.+.
T Consensus 129 H~dl~p~nill~~-~~~~~l~dfg~~~ 154 (267)
T cd06646 129 HRDIKGANILLTD-NGDVKLADFGVAA 154 (267)
T ss_pred ccCCCHHHEEECC-CCCEEECcCccce
Confidence 3788999999985 8999999999875
No 335
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=21.04 E-value=57 Score=28.94 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=24.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchhhh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCFEA 166 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f~~ 166 (372)
--||-+|+||+++. +|.+.=+|||.+...
T Consensus 121 ~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 149 (254)
T cd06627 121 IHRDIKAANILTTK-DGVVKLADFGVATKL 149 (254)
T ss_pred ccCCCCHHHEEECC-CCCEEEeccccceec
Confidence 35899999999996 899999999988643
No 336
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=20.96 E-value=55 Score=30.08 Aligned_cols=26 Identities=27% Similarity=0.479 Sum_probs=22.7
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
||-+|+||+++. +|.+.=+|||.+..
T Consensus 152 ~dlkp~nili~~-~~~~kl~dfg~~~~ 177 (291)
T cd06639 152 RDVKGNNILLTT-EGGVKLVDFGVSAQ 177 (291)
T ss_pred cCCCHHHEEEcC-CCCEEEeecccchh
Confidence 789999999986 88999999997753
No 337
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=20.93 E-value=51 Score=29.96 Aligned_cols=26 Identities=23% Similarity=0.425 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-||-.|+||+++. +|.+.=+|||.+.
T Consensus 124 H~dl~p~ni~i~~-~~~~~l~dfg~~~ 149 (277)
T cd06917 124 HRDIKAANILVTN-TGNVKLCDFGVAA 149 (277)
T ss_pred cCCcCHHHEEEcC-CCCEEEccCCcee
Confidence 3788999999997 9999999999764
No 338
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=20.90 E-value=58 Score=30.87 Aligned_cols=89 Identities=10% Similarity=0.058 Sum_probs=47.0
Q ss_pred HhccCCCCCCceEEEecCCeEEEEeccchhhhhcCCCCCCCCCCeeecHhhHHhhhccCcccchHHHHHHHHHHHhcCch
Q 017397 135 LLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRD 214 (372)
Q Consensus 135 ilglgDRH~~NIli~~~tG~v~hIDfg~~f~~~~~~l~~pE~VPFRLT~ni~~~lg~~g~eG~F~~~~~~~~~~Lr~~~~ 214 (372)
.+-=||=+++|+|++. +|.+.-|||..+=- ..++-+ |..-+...|+-.+-.......+...+...+.=..
T Consensus 197 ~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~----d~~~~D-----La~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~ 266 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDE-TRGGYFINFEKASF----ASPLTD-----LAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTD 266 (309)
T ss_pred eeeCCCCcHHhEEEcC-CCCEEEEEhhhccc----CCcHHH-----HHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCH
Confidence 3444999999999985 77888899876621 111111 1122233333222111113455555666555444
Q ss_pred HHHHHHHHHccCccccccc
Q 017397 215 SVMAMMEAFVHDPLINWRL 233 (372)
Q Consensus 215 ~l~~~l~~f~~Dpl~~W~~ 233 (372)
.=..+|-.++-=|---|..
T Consensus 267 ~E~~~l~~~L~fP~~f~~~ 285 (309)
T TIGR02904 267 EEIHLLTSYLAYPGPFIRV 285 (309)
T ss_pred HHHHHHHHHHhCCHHHHHH
Confidence 4344555555556666654
No 339
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=20.85 E-value=54 Score=29.95 Aligned_cols=27 Identities=22% Similarity=0.381 Sum_probs=23.5
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-+|+||+++. +|.+.=+|||.+..
T Consensus 144 H~dl~~~nili~~-~~~~~l~dfg~~~~ 170 (282)
T cd06636 144 HRDIKGQNVLLTE-NAEVKLVDFGVSAQ 170 (282)
T ss_pred cCCCCHHHEEECC-CCCEEEeeCcchhh
Confidence 3899999999986 99999999998753
No 340
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=20.75 E-value=49 Score=30.65 Aligned_cols=25 Identities=40% Similarity=0.565 Sum_probs=22.6
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-+|+||+++. +|.+.=+|||.+-
T Consensus 139 ~dl~p~nill~~-~~~~kL~dfg~~~ 163 (296)
T cd06618 139 RDVKPSNILLDA-SGNVKLCDFGISG 163 (296)
T ss_pred CCCcHHHEEEcC-CCCEEECccccch
Confidence 899999999985 9999999999764
No 341
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=20.64 E-value=52 Score=29.37 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=21.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccch
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDC 163 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~ 163 (372)
+|-.|+||+++. +|.+.-+|||.+
T Consensus 109 ~dlkp~Nil~~~-~~~~~l~df~~~ 132 (237)
T cd05576 109 RDLNPNNILLDD-RGHIQLTYFSRW 132 (237)
T ss_pred cCCCHHHEEEcC-CCCEEEecccch
Confidence 799999999996 899999999964
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=20.56 E-value=54 Score=30.14 Aligned_cols=26 Identities=27% Similarity=0.450 Sum_probs=22.8
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
-+|-+|+|||++. +|.+.=+|||.+-
T Consensus 128 H~dl~p~nil~~~-~~~~kl~dfg~~~ 153 (290)
T cd05613 128 YRDIKLENILLDS-NGHVVLTDFGLSK 153 (290)
T ss_pred ccCCCHHHeEECC-CCCEEEeeCccce
Confidence 4788999999986 8999999999764
No 343
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=20.43 E-value=67 Score=28.83 Aligned_cols=27 Identities=22% Similarity=0.201 Sum_probs=22.7
Q ss_pred ccCCCCCCceEEEecCCeEEEEeccchh
Q 017397 137 GLGDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 137 glgDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
--+|-.|+||+++. +|.+.=+|||.+-
T Consensus 122 ~H~dl~p~ni~i~~-~~~~kl~d~g~~~ 148 (256)
T cd05114 122 IHRDLAARNCLVSS-TGVVKVSDFGMTR 148 (256)
T ss_pred cccccCcceEEEcC-CCeEEECCCCCcc
Confidence 44688899999985 8999999999764
No 344
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=20.38 E-value=57 Score=29.81 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=21.9
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
||-.|+||+++. +|.+.=+|||..-
T Consensus 132 ~dlkp~nili~~-~~~~~l~dfg~~~ 156 (284)
T cd05081 132 RDLATRNILVES-ENRVKIGDFGLTK 156 (284)
T ss_pred ccCCHhhEEECC-CCeEEECCCcccc
Confidence 688999999986 8999999999764
No 345
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=20.35 E-value=1.5e+02 Score=26.60 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=22.6
Q ss_pred cCCCCCCceEEEecCCeEEEEeccchhh
Q 017397 138 LGDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 138 lgDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
-+|-.|+||+++...+.+.=+|||.+..
T Consensus 126 H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 126 HRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred cCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 3899999999987445688899998753
No 346
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=20.29 E-value=62 Score=30.15 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=22.5
Q ss_pred CCCCCCceEEEecCCeEEEEeccchhh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCFE 165 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f~ 165 (372)
+|-+|+||+++. +|.+.=+|||....
T Consensus 133 ~dikp~Nill~~-~~~~kL~Dfg~~~~ 158 (303)
T cd05110 133 RDLAARNVLVKS-PNHVKITDFGLARL 158 (303)
T ss_pred cccccceeeecC-CCceEEcccccccc
Confidence 588999999985 88899999998853
No 347
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=20.27 E-value=66 Score=29.60 Aligned_cols=25 Identities=20% Similarity=0.101 Sum_probs=22.2
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 144 ~dlkp~Nili~~-~~~~kl~dfg~~~ 168 (288)
T cd05093 144 RDLATRNCLVGE-NLLVKIGDFGMSR 168 (288)
T ss_pred cccCcceEEEcc-CCcEEeccCCccc
Confidence 789999999986 8999999999774
No 348
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=20.27 E-value=58 Score=34.81 Aligned_cols=25 Identities=32% Similarity=0.539 Sum_probs=22.3
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||||+. +|.+.=+|||.+-
T Consensus 128 rDLKP~NILl~~-~g~vkL~DFGls~ 152 (669)
T cd05610 128 RDLKPDNMLISN-EGHIKLTDFGLSK 152 (669)
T ss_pred CCccHHHEEEcC-CCCEEEEeCCCCc
Confidence 688999999985 8999999999874
No 349
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=20.17 E-value=77 Score=30.88 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+|||++. +|.+.=+|||.+-
T Consensus 236 rDLkp~Nil~~~-~~~~kL~DfGla~ 260 (374)
T cd05106 236 RDVAARNVLLTD-GRVAKICDFGLAR 260 (374)
T ss_pred ccCchheEEEeC-CCeEEEeeceeee
Confidence 788999999985 8999999999763
No 350
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=20.12 E-value=65 Score=29.70 Aligned_cols=25 Identities=20% Similarity=0.087 Sum_probs=22.1
Q ss_pred CCCCCCceEEEecCCeEEEEeccchh
Q 017397 139 GDRHPSNLMLHRYSGKILHIDFGDCF 164 (372)
Q Consensus 139 gDRH~~NIli~~~tG~v~hIDfg~~f 164 (372)
+|-.|+||+++. +|.+.=+|||.+.
T Consensus 147 ~dlkp~Nil~~~-~~~~~l~dfg~a~ 171 (291)
T cd05094 147 RDLATRNCLVGA-NLLVKIGDFGMSR 171 (291)
T ss_pred cccCcceEEEcc-CCcEEECCCCccc
Confidence 688999999996 8999999999774
No 351
>PF11007 CotJA: Spore coat associated protein JA (CotJA); InterPro: IPR020256 cotJA is part of the cotJ operon, which encodes spore coat proteins. Interaction of CotJA with CotJC is required for the assembly of both CotJA and CotJC into the spore coat [].
Probab=20.05 E-value=40 Score=21.45 Aligned_cols=11 Identities=36% Similarity=0.763 Sum_probs=9.7
Q ss_pred hhhhcccccCC
Q 017397 361 LCQNYVGWCPF 371 (372)
Q Consensus 361 L~~m~~GW~Pw 371 (372)
|++.|+.|+||
T Consensus 3 la~aYVp~Q~~ 13 (36)
T PF11007_consen 3 LAMAYVPFQPW 13 (36)
T ss_pred cCccccccCCC
Confidence 67889999998
Done!