Query 017398
Match_columns 372
No_of_seqs 218 out of 398
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 13:46:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.6 4.3E-15 1.5E-19 141.8 13.9 188 58-316 2-262 (285)
2 4af8_A Metacaspase MCA2; hydro 99.4 5.2E-12 1.8E-16 125.8 17.7 205 54-303 87-333 (367)
3 4f6o_A Metacaspase-1; rossmann 99.3 1.5E-11 5E-16 121.9 14.8 197 54-303 48-328 (350)
4 3uoa_B Mucosa-associated lymph 98.8 9.5E-08 3.2E-12 95.9 18.1 177 58-302 4-200 (390)
5 4ehd_A Caspase-3; caspase, apo 96.6 0.012 4E-07 56.3 10.6 183 57-303 42-245 (277)
6 2j32_A Caspase-3; Pro-caspase3 96.5 0.011 3.7E-07 55.4 9.8 182 58-303 15-217 (250)
7 3sir_A Caspase; hydrolase; 2.6 96.5 0.021 7.1E-07 53.8 11.4 179 58-303 19-224 (259)
8 1m72_A Caspase-1; caspase, cys 96.4 0.019 6.4E-07 54.6 10.5 182 58-303 31-234 (272)
9 3h11_B Caspase-8; cell death, 96.1 0.031 1.1E-06 53.0 10.7 184 58-303 16-236 (271)
10 3od5_A Caspase-6; caspase doma 96.1 0.038 1.3E-06 52.6 11.0 183 57-303 19-235 (278)
11 3e4c_A Caspase-1; zymogen, inf 95.9 0.15 5.3E-06 49.1 14.4 184 58-303 59-277 (302)
12 1f1j_A Caspase-7 protease; cas 95.8 0.042 1.4E-06 53.1 10.2 182 58-303 68-273 (305)
13 2nn3_C Caspase-1; cysteine pro 95.8 0.032 1.1E-06 54.2 9.2 182 58-303 59-262 (310)
14 1nw9_B Caspase 9, apoptosis-re 95.4 0.22 7.4E-06 47.1 13.1 119 58-224 20-152 (277)
15 2h54_A Caspase-1; allosteric s 95.0 0.19 6.4E-06 45.0 10.7 117 58-224 42-170 (178)
16 2fp3_A Caspase NC; apoptosis, 94.8 0.19 6.6E-06 48.7 11.2 120 58-224 60-188 (316)
17 1pyo_A Caspase-2; apoptosis, c 89.4 1.7 5.8E-05 38.4 9.0 122 57-225 31-159 (167)
18 2dko_A Caspase-3; low barrier 86.2 1.3 4.5E-05 38.2 6.2 119 58-225 15-140 (146)
19 3h11_A CAsp8 and FADD-like apo 82.3 2.7 9.2E-05 39.8 7.0 110 58-222 42-154 (272)
20 1qtn_A Caspase-8; apoptosis, d 78.3 1.3 4.4E-05 39.1 3.1 120 58-225 22-155 (164)
21 3p45_A Caspase-6; protease, hu 64.9 3.3 0.00011 37.2 2.6 120 58-226 43-169 (179)
22 2ql9_A Caspase-7; cysteine pro 64.0 2.5 8.4E-05 37.7 1.5 118 58-224 43-167 (173)
23 3ca8_A Protein YDCF; two domai 28.3 46 0.0016 31.1 4.0 35 63-99 65-119 (266)
24 2r8q_A Class I phosphodiestera 24.3 34 0.0012 33.5 2.4 25 68-92 96-121 (359)
25 1tbf_A CGMP-specific 3',5'-cyc 24.1 42 0.0014 32.7 2.9 25 68-92 97-122 (347)
26 1taz_A Calcium/calmodulin-depe 22.6 32 0.0011 33.8 1.8 24 69-92 79-103 (365)
27 4gdk_A Ubiquitin-like protein 21.8 57 0.002 25.9 2.8 33 137-180 28-60 (91)
28 3m7v_A Phosphopentomutase; str 21.7 29 0.00099 32.0 1.2 22 160-181 324-345 (413)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.61 E-value=4.3e-15 Score=141.83 Aligned_cols=188 Identities=14% Similarity=0.153 Sum_probs=137.0
Q ss_pred CCeEEEEEeccCC----CCC----ch-hhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccC
Q 017398 58 GTRWAVLLAGSNG----FWN----YR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYK 128 (372)
Q Consensus 58 ~~~wAVLVagS~g----w~N----YR-HqADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~ 128 (372)
+++||+||+-+++ |.+ -+ =..|+..+.++|++.||+ |++++-++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~~------------------------ 54 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTKA------------------------ 54 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGGG------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCCc------------------------
Confidence 4789999998874 311 11 248999999999999997 66665321
Q ss_pred CccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------------CcccCCCCCCCCHH
Q 017398 129 GVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------------GVLGMPTSRYIYAD 195 (372)
Q Consensus 129 gv~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~-------------g~l~fpd~~~L~a~ 195 (372)
.|.+|+++.|..- +-+..|+|.+||||+|||.. ++|...|+. |..+
T Consensus 55 ----------~t~~~i~~al~~l----------~~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~-i~~~ 113 (285)
T 3bij_A 55 ----------ATRAKVIDAIGKA----------AKALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGE-LIDD 113 (285)
T ss_dssp ----------CCHHHHHHHHHHH----------HHHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSE-EEHH
T ss_pred ----------cCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCC-ccHH
Confidence 5788898888611 11346789999999999962 356555654 7788
Q ss_pred HHHHHHHHHHHcCCCceEEEEeecccccccccc----------------------cCC----------------------
Q 017398 196 ELIDVLKKKHASGNYKSLVFYLEACESGSIFEG----------------------LLP---------------------- 231 (372)
Q Consensus 196 dL~~~L~~M~~~~~Ykklvf~vEAC~SGSmfe~----------------------llp---------------------- 231 (372)
+|.+.|+.| ..-+++++++|+|+||++.++ .+|
T Consensus 114 ~l~~~l~~l---~~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 190 (285)
T 3bij_A 114 ELYALLGKF---AAGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKT 190 (285)
T ss_dssp HHHHHHTTS---CSSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHC
T ss_pred HHHHHHHhc---cCCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhc
Confidence 999888766 235789999999999998762 011
Q ss_pred -------CCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhhhcccccccCCCcccHHHHHHHHHhhccCC
Q 017398 232 -------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASY 304 (372)
Q Consensus 232 -------~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~~ 304 (372)
...++++++|+.++|.||-.- .. .+||.++++-..... ...|+.++++.|++++..
T Consensus 191 ~~~~~~~~~~~~i~lsa~~~~q~A~e~~----------~~-----G~FT~aLl~~L~~~~-~~~s~~~l~~~v~~~~~~- 253 (285)
T 3bij_A 191 KKVDLADVKASILLISGCQDNQLSQDGA----------FN-----GAFTGQLLRVWKNGL-YKGSYRSFHKAIVRRMPP- 253 (285)
T ss_dssp CCCCTTTCSSEEEEEESSCTTSCCEECS----------SS-----CHHHHHHHHHHGGGT-CCSCHHHHHHHHHHHSCT-
T ss_pred ccccccCCCCCEEEEEeCCCCccccccc----------cC-----CHHHHHHHHHHhhCC-CCcCHHHHHHHHHHhcCC-
Confidence 123689999999999998531 12 489999887554322 346999999999998864
Q ss_pred CCCCCCcceecC
Q 017398 305 NSYGSHVMQYGD 316 (372)
Q Consensus 305 ~~~~Shv~~yGd 316 (372)
.+||+.||.
T Consensus 254 ---~Q~P~~~~~ 262 (285)
T 3bij_A 254 ---DQTPNFFTA 262 (285)
T ss_dssp ---TCCCEEEEE
T ss_pred ---CCCcceeCC
Confidence 588998885
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.41 E-value=5.2e-12 Score=125.77 Aligned_cols=205 Identities=17% Similarity=0.109 Sum_probs=135.8
Q ss_pred CCCCCCeEEEEEeccCCC--CCch-hhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCc
Q 017398 54 DDSVGTRWAVLLAGSNGF--WNYR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (372)
Q Consensus 54 ~~~~~~~wAVLVagS~gw--~NYR-HqADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (372)
....+++|||||+-+.+= .+-+ =..|+-.+.+.|++.||+.++|+++.-++- .| +
T Consensus 87 ~~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~-----~p--~--------------- 144 (367)
T 4af8_A 87 PLPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDN-----FP--G--------------- 144 (367)
T ss_dssp CCTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTT-----CT--T---------------
T ss_pred CCCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEeccccc-----cc--c---------------
Confidence 344589999999988431 1222 247999999999999999999998874431 11 1
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC---------C---cccCCCC---CCCCHH
Q 017398 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP---------G---VLGMPTS---RYIYAD 195 (372)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~---------g---~l~fpd~---~~L~a~ 195 (372)
.....|.+|+++.|.-- +-+..++|.+||||+|||.. | .|.-.|. ..|..+
T Consensus 145 ----~~~~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~dd 210 (367)
T 4af8_A 145 ----RTDQPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDD 210 (367)
T ss_dssp ----CCBCCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHH
T ss_pred ----cccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHH
Confidence 12457999999988710 11356889999999999982 1 2433341 247778
Q ss_pred HHHHHH-HHHHHcCCCceEEEEeecccccccccccC-----------------------CCCCcEEEEeecCCCCccccc
Q 017398 196 ELIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLL-----------------------PEGLNIYATTASNAEESSWGT 251 (372)
Q Consensus 196 dL~~~L-~~M~~~~~Ykklvf~vEAC~SGSmfe~ll-----------------------p~~~NV~aiTASn~~ESSya~ 251 (372)
||.+.| +.+ ..-.++++++|+|+||++.+--. +..-+++.++|+..+|.|.-.
T Consensus 211 eL~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~ 287 (367)
T 4af8_A 211 DIHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADV 287 (367)
T ss_dssp HHHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCC
T ss_pred HHHHHHHHhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhh
Confidence 888874 443 23479999999999999976210 012268999999999999875
Q ss_pred cCCCCCCCCCCCCcccchhhhhhhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 252 YCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 252 yc~~~~~~~~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
.-...- .. -+.--..+||+++++-... ...-|..++++.+++.+..
T Consensus 288 ~~~~~f--~~--g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~~ 333 (367)
T 4af8_A 288 KNTATF--GT--GSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLKR 333 (367)
T ss_dssp C-----------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHHH
T ss_pred hccccc--cc--cccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHH
Confidence 310000 00 0001135899999986643 2456888899988887763
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.5e-11 Score=121.88 Aligned_cols=197 Identities=20% Similarity=0.299 Sum_probs=126.2
Q ss_pred CCCCCCeEEEEEeccCC--CCCch-hhhHHHHHHHHHHh-CCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCC
Q 017398 54 DDSVGTRWAVLLAGSNG--FWNYR-HQADICHAYQLLRK-GGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKG 129 (372)
Q Consensus 54 ~~~~~~~wAVLVagS~g--w~NYR-HqADv~~~Yq~Lk~-~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~g 129 (372)
....+++|||||+-+.+ +.+-+ =..||-.+.++|++ .|+++++|+++.-++ .+|
T Consensus 48 s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~----------------- 105 (350)
T 4f6o_A 48 SQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL----------------- 105 (350)
T ss_dssp CCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG-----------------
T ss_pred CCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc-----------------
Confidence 45568999999998632 11222 24799999999987 599999998876442 111
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----------C---cccCCCC---CCCC
Q 017398 130 VPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----------G---VLGMPTS---RYIY 193 (372)
Q Consensus 130 v~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----------g---~l~fpd~---~~L~ 193 (372)
....|.+|+++.|. + + +-+..++|.+||||+|||.. | .|.-.|. ..|.
T Consensus 106 ------~~~pTr~nI~~aL~---~-L------~~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ 169 (350)
T 4f6o_A 106 ------VRVPTRANMIRAMQ---W-L------VKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPII 169 (350)
T ss_dssp ------GGSCCHHHHHHHHH---H-H------HTTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEE
T ss_pred ------ccCCCHHHHHHHHH---H-H------HHhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCccc
Confidence 12468999999987 1 1 11346889999999999972 2 2444341 2488
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEeecccccccccc--------cC-----------------------------------
Q 017398 194 ADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG--------LL----------------------------------- 230 (372)
Q Consensus 194 a~dL~~~L~~M~~~~~Ykklvf~vEAC~SGSmfe~--------ll----------------------------------- 230 (372)
.+||.+.|.+. ...=.++++|+|+||||++.+- .+
T Consensus 170 ddeL~~~L~~~--l~~g~~vt~IlD~ChSGt~ldlp~~~~~~g~~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~ 247 (350)
T 4f6o_A 170 DDEMHDIMVKP--LQQGVRLTALFDSCHSGTVLDLPYTYSTKGIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSI 247 (350)
T ss_dssp HHHHHHHHTTT--CCTTCEEEEEECSSSCTTTTCCSEEEETTEEEECCCC------------------------------
T ss_pred HHHHHHHHHhh--cCCCCeEEEEEccCCCCcccccccccccccccCcchhhhhccccccchhhhhccccchhhcccchhh
Confidence 88998887642 2334699999999999999751 00
Q ss_pred ---------------------CCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhhhcccccccCCCccc
Q 017398 231 ---------------------PEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTET 289 (372)
Q Consensus 231 ---------------------p~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~wme~~~~~~l~~eT 289 (372)
...-+++.++++..+|.|.-+.-.+ .. ..+||+++++-... ....|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~QtSaD~~~~g------~~-----~GAmTyafi~aL~~--~p~~t 314 (350)
T 4f6o_A 248 FKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSADAVEDG------QN-----TGAMSHAFIKVMTL--QPQQS 314 (350)
T ss_dssp ---------------------CCCSEEEEEEEEC-------------------C-----CCHHHHHHHHHHHH--CCCCB
T ss_pred hhhhccccccccchhhhhhccCCCCCEEEEEecCCCCchhhhccCC------ce-----eehhHHHHHHHHHH--CCCCC
Confidence 0012577777777777777665321 22 35899999986653 35678
Q ss_pred HHHHHHHHHhhccC
Q 017398 290 LHQQYELVKTRTAS 303 (372)
Q Consensus 290 l~~qf~~Vk~~t~~ 303 (372)
..++++.+++....
T Consensus 315 Y~~Ll~~~r~~L~~ 328 (350)
T 4f6o_A 315 YLSLLQNMRKELAG 328 (350)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887753
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.85 E-value=9.5e-08 Score=95.88 Aligned_cols=177 Identities=13% Similarity=0.133 Sum_probs=122.1
Q ss_pred CCeEEEEEeccCCCC--Cch-hhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccccC
Q 017398 58 GTRWAVLLAGSNGFW--NYR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (372)
Q Consensus 58 ~~~wAVLVagS~gw~--NYR-HqADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY 134 (372)
+.++|+||+-+++-. +-+ =..|+-.+.+.|++.||+ ++++ .
T Consensus 4 ~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~l--~------------------------------- 47 (390)
T 3uoa_B 4 KDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVSL--L------------------------------- 47 (390)
T ss_dssp SCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEEE--E-------------------------------
T ss_pred CCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEEe--e-------------------------------
Confidence 589999999877532 212 137999999999999996 2221 1
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCC-------CCCHHHHHHHHHH
Q 017398 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSR-------YIYADELIDVLKK 203 (372)
Q Consensus 135 ~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~-------~L~a~dL~~~L~~ 203 (372)
++|.+++.+.|.--. + ...+.|.+++||+|||.. ++|.-.|.. .+..++|.+.|+.
T Consensus 48 ---DlT~~eI~~aL~~f~--------~--~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~ 114 (390)
T 3uoa_B 48 ---DLTEYEMRNAVDEFL--------L--LLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE 114 (390)
T ss_dssp ---SCCHHHHHHHHHHHH--------H--TCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHHH--------h--hCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh
Confidence 257788888887110 0 124679999999999954 555433432 3556666665554
Q ss_pred HHHcCCCceEEEEeecccccccccc------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhhhc
Q 017398 204 KHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWM 277 (372)
Q Consensus 204 M~~~~~Ykklvf~vEAC~SGSmfe~------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~wm 277 (372)
..=|..+|++|||+++..++. ..|...+++...|+.+++.||-...++ .. |-+|+.+..
T Consensus 115 ----~~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~~----gS~FtqaL~ 179 (390)
T 3uoa_B 115 ----KETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------LA----NGIFMKFLK 179 (390)
T ss_dssp ----TTCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------TC----CCHHHHHHT
T ss_pred ----cCCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------CC----CCHHHHHHH
Confidence 355788999999999755542 234455899999999999999763211 12 357888877
Q ss_pred ccccccCCCcccHHHHHHHHHhhcc
Q 017398 278 EDSDIHNLRTETLHQQYELVKTRTA 302 (372)
Q Consensus 278 e~~~~~~l~~eTl~~qf~~Vk~~t~ 302 (372)
+-... ..+|.+++..|.+++.
T Consensus 180 e~L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 180 DRLLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TTTTC----SSCHHHHHHHHHHHHT
T ss_pred HHHcc----CCCHHHHHHHHHHHHh
Confidence 75543 5789999999999996
No 5
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=96.59 E-value=0.012 Score=56.29 Aligned_cols=183 Identities=13% Similarity=0.177 Sum_probs=112.8
Q ss_pred CCCeEEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCc
Q 017398 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (372)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHqA--Dv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (372)
.....|+||.=+++-. .-|..+ |+-.+-++|++.|+. |..+.|
T Consensus 42 ~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------------- 90 (277)
T 4ehd_A 42 PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND-------------------------- 90 (277)
T ss_dssp SEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------------
T ss_pred CCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEecC--------------------------
Confidence 3578999999887753 356665 899999999999995 333333
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCC
Q 017398 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (372)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~ 209 (372)
+|.+.+.+.|.--. .+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 91 --------lt~~em~~~l~~f~-------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 152 (277)
T 4ehd_A 91 --------LTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLT 152 (277)
T ss_dssp --------CCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHHHH-------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhc
Confidence 67888888887211 01 123457888899999999987666663 55555544443100 0013
Q ss_pred CceEEEEeeccccccccccc--------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhh
Q 017398 210 YKSLVFYLEACESGSIFEGL--------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (372)
Q Consensus 210 Ykklvf~vEAC~SGSmfe~l--------------lp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (372)
-|=.+|+|+||...-+-.++ +|...++++.=|+.++.-||-. +.. |-+|.-.
T Consensus 153 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~----GS~fIq~ 218 (277)
T 4ehd_A 153 GKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN----------SKD----GSWFIQS 218 (277)
T ss_dssp TSCEEEEEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE----------TTT----EEHHHHH
T ss_pred CCccEEEEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC----------CCC----CcHHHHH
Confidence 35568999999865432221 2333456666666666555543 112 2344444
Q ss_pred hcccccccCCCcccHHHHHHHHHhhccC
Q 017398 276 WMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 276 wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
..+....+ -..+.|.+++..|.+++..
T Consensus 219 L~~~l~~~-~~~~dl~~ilt~V~~~V~~ 245 (277)
T 4ehd_A 219 LCAMLKQY-ADKLEFMHILTRVNRKVAT 245 (277)
T ss_dssp HHHHHHHH-TTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCCCHHHHHHHHHHHHHH
Confidence 44332221 1357899999999998874
No 6
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=96.52 E-value=0.011 Score=55.35 Aligned_cols=182 Identities=13% Similarity=0.165 Sum_probs=110.0
Q ss_pred CCeEEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
....|+||.=+++.. .-|.. .|+-.+-++|++.|+. |..+.|
T Consensus 15 ~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~-----V~~~~d--------------------------- 62 (250)
T 2j32_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND--------------------------- 62 (250)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES---------------------------
T ss_pred CccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCE-----EEEEeC---------------------------
Confidence 577999998877653 24555 4889999999999995 233332
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (372)
+|.+.+.+.|+-- . .+ +-...|-.++||.+||..|.+.--|+ .+.-++|.+.|..-+ ..-.=
T Consensus 63 -------lt~~em~~~l~~~-~------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~g 125 (250)
T 2j32_A 63 -------LTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (250)
T ss_dssp -------CCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred -------CCHHHHHHHHHHH-H------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcC
Confidence 5778888888711 0 11 11335778899999999987765565 355555544443200 00123
Q ss_pred ceEEEEeecccccccccc--------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhhh
Q 017398 211 KSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAW 276 (372)
Q Consensus 211 kklvf~vEAC~SGSmfe~--------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~w 276 (372)
|=.+|+|+||...-+-.+ .+|...++++.=|+.++.-||-.- .. |-+|.-..
T Consensus 126 KPKlf~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~~----------~~----gS~fiq~L 191 (250)
T 2j32_A 126 KPKLFIIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNS----------KD----GSWFIQSL 191 (250)
T ss_dssp SCEEEEEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEET----------TT----EEHHHHHH
T ss_pred CCeEEEEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecCC----------CC----CcHHHHHH
Confidence 446899999975432111 134444666666666665555431 22 23444443
Q ss_pred cccccccCCCcccHHHHHHHHHhhccC
Q 017398 277 MEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 277 me~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
.+.... .-..+.|.+++..|.+++..
T Consensus 192 ~~~l~~-~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 192 CAMLKQ-YADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp HHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHH-hCCCCCHHHHHHHHHHHHHH
Confidence 332221 12457899999999998875
No 7
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=96.46 E-value=0.021 Score=53.82 Aligned_cols=179 Identities=16% Similarity=0.213 Sum_probs=105.7
Q ss_pred CCeEEEEEeccCCCC---Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccc
Q 017398 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (372)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (372)
....|+||.=+++-. .-|.- .|+-.+-++|++.|+. |..+.|
T Consensus 19 ~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~-----V~~~~d---------------------------- 65 (259)
T 3sir_A 19 NRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFE-----VTVYKD---------------------------- 65 (259)
T ss_dssp EEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCE-----EEEEEE----------------------------
T ss_pred CccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEeC----------------------------
Confidence 468999999887753 33444 6999999999999996 333343
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHHHcC----
Q 017398 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASG---- 208 (372)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~~~~---- 208 (372)
+|.+.+.++|.-- . .+ +-...|-++++|.+||..|.|.=-|+. -+|.+.++.+...+
T Consensus 66 ------lt~~em~~~l~~~-~------~~--~h~~~d~~v~~~lsHG~~g~i~~~D~~----v~l~~i~~~f~~~~cpsL 126 (259)
T 3sir_A 66 ------CRYKDILRTIEYS-A------SQ--NHSDSDCILVAILSHGEMGYIYAKDTQ----YKLDNIWSFFTANHCPSL 126 (259)
T ss_dssp ------CSHHHHHHHHHHH-H------TS--CCTTEEEEEEEEEECTTCCCCCCTTHH----HHHHHTTGGGSTTTCGGG
T ss_pred ------CCHHHHHHHHHHH-H------Hh--hccCCCEEEEEEecCCCCCeEEeCCCc----EEHHHHHHHhhhccCccc
Confidence 5788888888721 1 01 123468889999999999977443432 34444444443221
Q ss_pred CCceEEEEeecccccccccc------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchh
Q 017398 209 NYKSLVFYLEACESGSIFEG------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGD 270 (372)
Q Consensus 209 ~Ykklvf~vEAC~SGSmfe~------------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD 270 (372)
.=|=.+|+|+||...-+-.+ .+|...++++.=|+.++.-||-. +--|-
T Consensus 127 ~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~--------------~~~GS 192 (259)
T 3sir_A 127 AGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN--------------TTRGS 192 (259)
T ss_dssp SSSCEEEEEEEETTSCEEC-----------------CEECCCCTTEEEEEEEECCSCCCSS--------------CCCSC
T ss_pred cCCCCEEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEEEECCCCeEeecC--------------CCCCc
Confidence 23556899999986543222 12333355555555555444432 11233
Q ss_pred hhhhhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 271 LYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 271 ~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
+|.-...+..... -..+.|.+++..|.+++..
T Consensus 193 ~fiq~L~~~l~~~-~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 193 WFMQSLCAELAAN-GKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp HHHHHHHHHHHHH-TTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Confidence 4444444333221 2357899999999999874
No 8
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=96.36 E-value=0.019 Score=54.56 Aligned_cols=182 Identities=16% Similarity=0.212 Sum_probs=110.7
Q ss_pred CCeEEEEEeccCCCC---Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccc
Q 017398 58 GTRWAVLLAGSNGFW---NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (372)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRH--qADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (372)
....|+||.=+++-. .-|. ..|+-.+-++|++.|+. |..+.|
T Consensus 31 ~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~-----V~~~~d---------------------------- 77 (272)
T 1m72_A 31 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFPN---------------------------- 77 (272)
T ss_dssp EEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES----------------------------
T ss_pred CCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEecC----------------------------
Confidence 478999998776542 2344 37889999999999994 333332
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCCc
Q 017398 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (372)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Yk 211 (372)
+|.+.+.+.|.--. .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 78 ------lt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gK 141 (272)
T 1m72_A 78 ------LKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 141 (272)
T ss_dssp ------CCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTS
T ss_pred ------cCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 57788888887210 01 113457889999999999988776764 65556555443200 001224
Q ss_pred eEEEEeecccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhh
Q 017398 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (372)
Q Consensus 212 klvf~vEAC~SGSmfe~----------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (372)
=.+|+|+||...-+-.+ ..|...++++.=|+.++.-||-.- .. |-+|.-.
T Consensus 142 PKlffiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~~----------~~----GS~fiq~ 207 (272)
T 1m72_A 142 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRNT----------TR----GSWFMQA 207 (272)
T ss_dssp CEEEEEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEET----------TT----EEHHHHH
T ss_pred ceEEEEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecCC----------CC----CCHHHHH
Confidence 56889999985433111 133334666666666666665431 12 2344444
Q ss_pred hcccccccCCCcccHHHHHHHHHhhccC
Q 017398 276 WMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 276 wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
..+.... .-..+.|.+++..|.+++..
T Consensus 208 L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 234 (272)
T 1m72_A 208 LCEELRY-AGTERDILTLLTFVCQKVAL 234 (272)
T ss_dssp HHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 4432222 12347899999999998863
No 9
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=96.14 E-value=0.031 Score=52.99 Aligned_cols=184 Identities=16% Similarity=0.170 Sum_probs=110.5
Q ss_pred CCeEEEEEeccCCCC-----------Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 017398 58 GTRWAVLLAGSNGFW-----------NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (372)
Q Consensus 58 ~~~wAVLVagS~gw~-----------NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~ 124 (372)
.-..|+||.=.++-. .-|.. .|+-.+-++|++.||. |..+.|
T Consensus 16 ~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------- 70 (271)
T 3h11_B 16 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHDD-------------------- 70 (271)
T ss_dssp SCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------
T ss_pred CCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEeC--------------------
Confidence 467999999877653 34544 5889999999999995 333333
Q ss_pred cccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHH
Q 017398 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (372)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M 204 (372)
+|.+.+.++|.--.. + +-...|-++++|.+||..|.|.--|+..+.-++|.+.|.--
T Consensus 71 --------------lt~~em~~~l~~~~~-------~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~ 127 (271)
T 3h11_B 71 --------------CTVEQIYEILKIYQL-------M--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 127 (271)
T ss_dssp --------------CCHHHHHHHHHHHHH-------S--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred --------------CCHHHHHHHHHHHHH-------h--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhc
Confidence 678888888872110 1 11335778888899999998877676556555555544320
Q ss_pred H-HcCCCceEEEEeecccccccccc-----------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCC
Q 017398 205 H-ASGNYKSLVFYLEACESGSIFEG-----------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGP 260 (372)
Q Consensus 205 ~-~~~~Ykklvf~vEAC~SGSmfe~-----------------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~ 260 (372)
. ..-.=|=.+|+|+||...-+-.+ .+|...++++.=|+-++.-||-.-
T Consensus 128 ~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~~-------- 199 (271)
T 3h11_B 128 KCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRNP-------- 199 (271)
T ss_dssp TCGGGTTSCEEEEEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEET--------
T ss_pred cChhhcCCccEEEEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecCC--------
Confidence 0 00123456899999976433111 133333555555555555555331
Q ss_pred CCCCcccchhhhhhhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 261 PPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 261 ~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
.. |-+|.-...+-.....-+.+.|.+++..|.+++..
T Consensus 200 --~~----GS~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 200 --AE----GTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp --TT----EEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHT
T ss_pred --CC----CcHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhh
Confidence 12 22344333332222111257899999999999875
No 10
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=96.08 E-value=0.038 Score=52.63 Aligned_cols=183 Identities=17% Similarity=0.186 Sum_probs=109.5
Q ss_pred CCCeEEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCc
Q 017398 57 VGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (372)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (372)
.....|+||.=.++-. .-|.. .|+-.+-++|++.|+. |..+.|
T Consensus 19 ~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------------- 67 (278)
T 3od5_A 19 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFND-------------------------- 67 (278)
T ss_dssp SBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------------
T ss_pred CCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEecC--------------------------
Confidence 3578999999888753 34544 5888999999999994 333333
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCC
Q 017398 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (372)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~ 209 (372)
+|.+.+.++|.- .. .+ +-...|-+++++.+||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 68 --------lt~~em~~~l~~-~~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 129 (278)
T 3od5_A 68 --------LKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLV 129 (278)
T ss_dssp --------CCHHHHHHHHHH-HH------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHH-HH------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhc
Confidence 678888888872 11 01 113457788888999999988776765 66666555553200 0012
Q ss_pred CceEEEEeeccccccccccc---------------------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCC
Q 017398 210 YKSLVFYLEACESGSIFEGL---------------------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPP 262 (372)
Q Consensus 210 Ykklvf~vEAC~SGSmfe~l---------------------------lp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~ 262 (372)
=|=.+|+|+||...-.-.++ +|...++++.=|+-++.-||-. +
T Consensus 130 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~ 199 (278)
T 3od5_A 130 GKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE----------T 199 (278)
T ss_dssp TSCEEEEEESCCSSBCBCEECCC---------------------CCCEETTTTEEEEESSCTTBCCEEE----------T
T ss_pred CCCcEEEEecCCCCcccCCeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecC----------C
Confidence 34568999999865432221 1222244444444444444432 1
Q ss_pred CCcccchhhhhhhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 263 EYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 263 ~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
.. |-+|.-...+-... .-..+.|.+++..|.+++..
T Consensus 200 ~~----GS~fIq~L~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 235 (278)
T 3od5_A 200 VN----GSWYIQDLCEMLGK-YGSSLEFTELLTLVNRKVSQ 235 (278)
T ss_dssp TT----EEHHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred CC----CcHHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 12 22333333322221 12357899999999998875
No 11
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=95.88 E-value=0.15 Score=49.08 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=105.5
Q ss_pred CCeEEEEEeccCCCC-Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccccC
Q 017398 58 GTRWAVLLAGSNGFW-NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (372)
Q Consensus 58 ~~~wAVLVagS~gw~-NYRH--qADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY 134 (372)
+.+.|+||+=+++-. .-|. ..|+-.+-++|++.||. |..+.|
T Consensus 59 ~~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~d------------------------------ 103 (302)
T 3e4c_A 59 RTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS-----VDVKKN------------------------------ 103 (302)
T ss_dssp CCCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES------------------------------
T ss_pred CccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEeeC------------------------------
Confidence 578999999987531 1233 46889999999999996 333333
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCCCHHHHHHHHHHHH-HcC
Q 017398 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-ASG 208 (372)
Q Consensus 135 ~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~M~-~~~ 208 (372)
+|.+.+.+.|.--.. + .+-...|-+++||.+||..|.|.=-|. +.+.-++|.+.|..-+ ..-
T Consensus 104 ----lt~~em~~~l~~f~~-------~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL 171 (302)
T 3e4c_A 104 ----LTASDMTTELEAFAH-------R-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSL 171 (302)
T ss_dssp ----CCHHHHHHHHHHHHT-------C-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGG
T ss_pred ----CCHHHHHHHHHHHHh-------h-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhh
Confidence 678888888872100 1 111224668888999999986533332 3355555555443200 000
Q ss_pred CCceEEEEeeccccccccccc--------------------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCC
Q 017398 209 NYKSLVFYLEACESGSIFEGL--------------------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPP 262 (372)
Q Consensus 209 ~Ykklvf~vEAC~SGSmfe~l--------------------------lp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~ 262 (372)
.=|=.+|+|+||...-.-..+ .|...++++.=|+.++.-||-.
T Consensus 172 ~gKPKlffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~----------- 240 (302)
T 3e4c_A 172 KDKPKVIIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH----------- 240 (302)
T ss_dssp TTSCEEEEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSS-----------
T ss_pred cCCccEEEEECCCCCCCCcceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecC-----------
Confidence 345568999999875432111 1222244444444444444422
Q ss_pred CCcccchhhhhhhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 263 EYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 263 ~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
+--|-+|.-...+-...+ -..+.|.++|..|+.++..
T Consensus 241 ---~~~GSwFIqaL~~~l~~~-~~~~dl~~il~~V~~~v~~ 277 (302)
T 3e4c_A 241 ---PTMGSVFIGRLIEHMQEY-ACSCDVEEIFRKVRFSFEQ 277 (302)
T ss_dssp ---TTCCCHHHHHHHHHHHHH-TTTSCHHHHHHHHHHHTSS
T ss_pred ---CCCCcHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHhC
Confidence 222334444444333221 1356899999999988864
No 12
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=95.81 E-value=0.042 Score=53.12 Aligned_cols=182 Identities=15% Similarity=0.189 Sum_probs=109.9
Q ss_pred CCeEEEEEeccCCCCC----chhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFWN----YRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~N----YRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
....|+||.=+++..+ -|.. .|+-.+-++|++.||. |..+.
T Consensus 68 ~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~---------------------------- 114 (305)
T 1f1j_A 68 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 114 (305)
T ss_dssp EEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCE-----EEEec----------------------------
Confidence 5779999988877542 3444 6899999999999994 22333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (372)
++|.+.+.+.|.- .. .+ . -...|-+++||.+||..|+|.--|+. +.-++|...|.--. ..-.=
T Consensus 115 ------dlt~~em~~~l~~-~~------~~-~-h~~~d~~vv~ilsHG~~~~i~g~D~~-v~l~~I~~~f~~~~CpsL~g 178 (305)
T 1f1j_A 115 ------DCSCAKMQDLLKK-AS------EE-D-HTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRSKTLLE 178 (305)
T ss_dssp ------SCCHHHHHHHHHH-HH------HS-C-GGGEEEEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGTT
T ss_pred ------CcCHHHHHHHHHH-HH------Hh-h-cCCCCEEEEEEecCCCCCeEEecCCe-EEHHHHHHHhhhccChhhcC
Confidence 2577888888872 11 01 1 12357788999999999987666653 55555554433100 00023
Q ss_pred ceEEEEeecccccccccc-----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhh
Q 017398 211 KSLVFYLEACESGSIFEG-----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYS 273 (372)
Q Consensus 211 kklvf~vEAC~SGSmfe~-----------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS 273 (372)
|=.+|+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.. |-+|.
T Consensus 179 KPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~----------~~~----GS~Fi 244 (305)
T 1f1j_A 179 KPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS----------PGR----GSWFV 244 (305)
T ss_dssp SCEEEEEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE----------TTT----EEHHH
T ss_pred CceEEEeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC----------CCC----CCHHH
Confidence 456889999986543222 13333466666666666655532 112 23444
Q ss_pred hhhcccccccCCCcccHHHHHHHHHhhccC
Q 017398 274 IAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 274 ~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
-...+.... .-.++.|.++|..|.+++..
T Consensus 245 qaL~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 245 QALCSILEE-HGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp HHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 443332221 12347899999999998874
No 13
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=95.79 E-value=0.032 Score=54.15 Aligned_cols=182 Identities=16% Similarity=0.206 Sum_probs=109.6
Q ss_pred CCeEEEEEeccCCCC---Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccc
Q 017398 58 GTRWAVLLAGSNGFW---NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (372)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRH--qADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (372)
....|+||.=+++-. .-|. ..|+-.+-++|++.||. |..+.|
T Consensus 59 ~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~-----V~~~~d---------------------------- 105 (310)
T 2nn3_C 59 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFPN---------------------------- 105 (310)
T ss_dssp BCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES----------------------------
T ss_pred CcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEecC----------------------------
Confidence 478999998776542 2344 36888999999999994 333332
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCCc
Q 017398 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (372)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Yk 211 (372)
+|.+.+.++|.--. .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 106 ------lt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gK 169 (310)
T 2nn3_C 106 ------LKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 169 (310)
T ss_dssp ------CCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTS
T ss_pred ------CCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 57788888887211 01 012357788899999999988776764 66566555443200 001234
Q ss_pred eEEEEeecccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCcccchhhhhhh
Q 017398 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (372)
Q Consensus 212 klvf~vEAC~SGSmfe~----------------llp~~~NV~aiTASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (372)
=.+|+|+||...-+-.+ .+|...++++.=|+.++.-||-. +--|-+|.-.
T Consensus 170 PKlffiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~--------------~~~GSwFIqa 235 (310)
T 2nn3_C 170 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN--------------TTRGSWFMQA 235 (310)
T ss_dssp CEEEEEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS--------------SEEEEHHHHH
T ss_pred ceEEEEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC--------------CCCCCHHHHH
Confidence 56899999986433111 12333356665565555544432 2223345544
Q ss_pred hcccccccCCCcccHHHHHHHHHhhccC
Q 017398 276 WMEDSDIHNLRTETLHQQYELVKTRTAS 303 (372)
Q Consensus 276 wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (372)
..+.... .-..+.|.+++..|.+++..
T Consensus 236 L~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 262 (310)
T 2nn3_C 236 LCEELRY-AGTERDILTLLTFVCQKVAL 262 (310)
T ss_dssp HHHHHHT-TTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 4443322 22457899999999998863
No 14
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=95.36 E-value=0.22 Score=47.07 Aligned_cols=119 Identities=14% Similarity=0.187 Sum_probs=72.7
Q ss_pred CCeEEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
....|+||.=.++-. .-|.. .|+-.+-++|++.|+. |.++.
T Consensus 20 ~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 66 (277)
T 1nw9_B 20 PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFM-----VEVKG---------------------------- 66 (277)
T ss_dssp SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE----------------------------
T ss_pred cccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEc----------------------------
Confidence 467999998777643 23544 5888999999999984 23333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------CcccCCCCCCCCHHHHHHHHHHH
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------GVLGMPTSRYIYADELIDVLKKK 204 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~-------g~l~fpd~~~L~a~dL~~~L~~M 204 (372)
++|.+.+.++|.-- . .+ .. ...|-.+++|.+||.. |.+.--|+..+.-++|.+.|..-
T Consensus 67 ------dlt~~em~~~l~~~-~------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~ 131 (277)
T 1nw9_B 67 ------DLTAKKMVLALLEL-A------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGT 131 (277)
T ss_dssp ------SCCHHHHHHHHHHH-H------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhccc
Confidence 25778888888721 0 01 11 2357788888899987 76654455445555555444310
Q ss_pred H-HcCCCceEEEEeecccccc
Q 017398 205 H-ASGNYKSLVFYLEACESGS 224 (372)
Q Consensus 205 ~-~~~~Ykklvf~vEAC~SGS 224 (372)
. ..-.=|=.+|+|+||...-
T Consensus 132 ~CpsL~gKPKlffiQACRG~~ 152 (277)
T 1nw9_B 132 SCPSLGGKPKLFFIQACGGEQ 152 (277)
T ss_dssp TCGGGTTSCEEEEEEEEC---
T ss_pred CChhHcCCCcEEEEeccCCCc
Confidence 0 0012345689999997543
No 15
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=94.96 E-value=0.19 Score=45.02 Aligned_cols=117 Identities=18% Similarity=0.236 Sum_probs=75.1
Q ss_pred CCeEEEEEeccCCCC-Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccccC
Q 017398 58 GTRWAVLLAGSNGFW-NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (372)
Q Consensus 58 ~~~wAVLVagS~gw~-NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY 134 (372)
+...|+||.=+++-. .-|.- .|+-.+-++|++.||. |..+.|
T Consensus 42 ~~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~-----V~~~~d------------------------------ 86 (178)
T 2h54_A 42 RTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS-----VDVKKN------------------------------ 86 (178)
T ss_dssp CCCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES------------------------------
T ss_pred cCCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCE-----EEEecC------------------------------
Confidence 467999998887521 12433 7889999999999995 222232
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCCCHHHHHHHHHHHHHcC-
Q 017398 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKHASG- 208 (372)
Q Consensus 135 ~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~M~~~~- 208 (372)
+|.+.+.+.|+--. .+ .+-...|-+++||.+||..|.|.-.|+ +.+.-++|...+.. .+
T Consensus 87 ----lt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~---~~C 151 (178)
T 2h54_A 87 ----LTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNT---KNC 151 (178)
T ss_dssp ----CCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHST---TTC
T ss_pred ----CCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhh---cCC
Confidence 67888888887210 01 111234678888889999987665565 23555555544432 21
Q ss_pred ---CCceEEEEeecccccc
Q 017398 209 ---NYKSLVFYLEACESGS 224 (372)
Q Consensus 209 ---~Ykklvf~vEAC~SGS 224 (372)
.=|-.+|+++||..+-
T Consensus 152 psL~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 152 PSLKDKPKVIIIQACRGDS 170 (178)
T ss_dssp GGGTTSCEEEEEESCSSSB
T ss_pred hhhcCCceEEEEECCCCCC
Confidence 2356689999999854
No 16
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=94.80 E-value=0.19 Score=48.66 Aligned_cols=120 Identities=11% Similarity=0.118 Sum_probs=75.4
Q ss_pred CCeEEEEEeccCCCC--Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcccc
Q 017398 58 GTRWAVLLAGSNGFW--NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (372)
Q Consensus 58 ~~~wAVLVagS~gw~--NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iD 133 (372)
....|+||.=.++-. .-|.. .|+-.+-++|++.|+. |.++.
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~------------------------------ 104 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFT-----IFPYG------------------------------ 104 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHHTTEE-----EEEEC------------------------------
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEcc------------------------------
Confidence 578999998776541 34544 6888999999999994 33333
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCCCCCHHHHHHHHHHHH-HcC
Q 017398 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSRYIYADELIDVLKKKH-ASG 208 (372)
Q Consensus 134 Y~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~~L~a~dL~~~L~~M~-~~~ 208 (372)
++|.+.+.++|.--. .+ ..++..|-++++|.+||.. |.|.--|+..+.-++|.+.|..-. ..-
T Consensus 105 ----dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL 172 (316)
T 2fp3_A 105 ----NVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYL 172 (316)
T ss_dssp ----SCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGG
T ss_pred ----CCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhh
Confidence 357788888887210 11 1121357788899999998 888777776566666555443210 001
Q ss_pred CCceEEEEeecccccc
Q 017398 209 NYKSLVFYLEACESGS 224 (372)
Q Consensus 209 ~Ykklvf~vEAC~SGS 224 (372)
.=|=.+|+|+||...-
T Consensus 173 ~gKPKlffiQACRG~~ 188 (316)
T 2fp3_A 173 VNKPKVLMFPFARGDE 188 (316)
T ss_dssp TTSCEEEEESCC----
T ss_pred cCCceEEEEecCCCCc
Confidence 2345689999998643
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=89.38 E-value=1.7 Score=38.41 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=81.1
Q ss_pred CCCeEEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCc
Q 017398 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (372)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHqA--Dv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (372)
.....|+||.=.++-. ..|.-+ |+-.+-+++++.|+. |..+.|
T Consensus 31 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~d-------------------------- 79 (167)
T 1pyo_A 31 RPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYD-----VHVLCD-------------------------- 79 (167)
T ss_dssp SSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEE-----EEEEES--------------------------
T ss_pred CCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCE-----EEEeeC--------------------------
Confidence 3578999998776532 346554 889999999999994 233332
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCC
Q 017398 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (372)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~ 209 (372)
+|.+.+...|+-- . .+ .+-...|-.+|++.+||..|.|.-.|+..+.-++|...|.--+ ..-.
T Consensus 80 --------lt~~em~~~l~~~-~------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~ 143 (167)
T 1pyo_A 80 --------QTAQEMQEKLQNF-A------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQ 143 (167)
T ss_dssp --------CCHHHHHHHHHHH-H------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHHh-h------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHc
Confidence 5788888888721 0 00 0112357889999999999988877876566666666554200 0112
Q ss_pred CceEEEEeeccccccc
Q 017398 210 YKSLVFYLEACESGSI 225 (372)
Q Consensus 210 Ykklvf~vEAC~SGSm 225 (372)
=|=.+|+|.||...-.
T Consensus 144 gKPKlffiQACRG~~~ 159 (167)
T 1pyo_A 144 NKPKMFFIQACRGDET 159 (167)
T ss_dssp TSCEEEEEESCSSSBC
T ss_pred CCCeEEEEECCCCCCC
Confidence 3456899999987554
No 18
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=86.24 E-value=1.3 Score=38.21 Aligned_cols=119 Identities=14% Similarity=0.202 Sum_probs=77.7
Q ss_pred CCeEEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHqA--Dv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
..-.|+||.=.++-. .-|.-+ |+-.+-+++++.|+. |..+.|
T Consensus 15 ~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~d--------------------------- 62 (146)
T 2dko_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND--------------------------- 62 (146)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES---------------------------
T ss_pred CceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEeeC---------------------------
Confidence 466899997776542 346555 889999999999996 333332
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHH-HHcCCC
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK-HASGNY 210 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M-~~~~~Y 210 (372)
+|.+.+...|+-- . .+ +-...|-.++++.+||..|.|.-.|+ .+.-++|...+.-- -..=.=
T Consensus 63 -------lt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~g 125 (146)
T 2dko_A 63 -------LTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (146)
T ss_dssp -------CCHHHHHHHHHHH-H------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred -------CCHHHHHHHHHHH-H------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcC
Confidence 5778888888721 0 01 11345789999999999998877777 36655555544310 001123
Q ss_pred ceEEEEeeccccccc
Q 017398 211 KSLVFYLEACESGSI 225 (372)
Q Consensus 211 kklvf~vEAC~SGSm 225 (372)
|=.+|+|.||...-.
T Consensus 126 KPKlffiQACRG~~~ 140 (146)
T 2dko_A 126 KPKLFIIQACRGTEL 140 (146)
T ss_dssp SCEEEEEESCCSSBC
T ss_pred CCeEEEEECCCCCCC
Confidence 556889999987543
No 19
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=82.25 E-value=2.7 Score=39.83 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=70.5
Q ss_pred CCeEEEEEeccCCCCCchhhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCccccCCCC
Q 017398 58 GTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGE 137 (372)
Q Consensus 58 ~~~wAVLVagS~gw~NYRHqADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY~g~ 137 (372)
..-.||||.=.. .|+-.+-+++++.|+. |..++
T Consensus 42 ~rG~~LIinn~~--------~D~~~L~~~f~~LgF~-----V~~~~---------------------------------- 74 (272)
T 3h11_A 42 PLGICLIIDCIG--------NETELLRDTFTSLGYE-----VQKFL---------------------------------- 74 (272)
T ss_dssp SSEEEEEEESSC--------CCCSHHHHHHHHHTEE-----EEEEE----------------------------------
T ss_pred cceEEEEECCch--------HHHHHHHHHHHHCCCE-----EEEee----------------------------------
Confidence 456888888432 4777788888888874 33333
Q ss_pred CCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCC--CCCHHHHHHHHHHHH-HcCCCceEE
Q 017398 138 DVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSR--YIYADELIDVLKKKH-ASGNYKSLV 214 (372)
Q Consensus 138 ~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~--~L~a~dL~~~L~~M~-~~~~Ykklv 214 (372)
++|.+.+...|.--.. + .+-...|-+++++.+||..|.|.=-|+. .+.-++|.+.|..-+ ..=.=|=.+
T Consensus 75 dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKl 146 (272)
T 3h11_A 75 HLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKM 146 (272)
T ss_dssp SCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcE
Confidence 3678888888872110 0 1123468899999999999987666664 355666655553200 001345578
Q ss_pred EEeecccc
Q 017398 215 FYLEACES 222 (372)
Q Consensus 215 f~vEAC~S 222 (372)
|+|.||..
T Consensus 147 ffiQACRG 154 (272)
T 3h11_A 147 FFIQNYVV 154 (272)
T ss_dssp EEEEEEEC
T ss_pred EEEECCCC
Confidence 99999985
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=78.26 E-value=1.3 Score=39.05 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=79.3
Q ss_pred CCeEEEEEeccCCCC-----------Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 017398 58 GTRWAVLLAGSNGFW-----------NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (372)
Q Consensus 58 ~~~wAVLVagS~gw~-----------NYRH--qADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~ 124 (372)
..-+|+||.=.++-. .-|. ..|+-.+-+++++.|+. |..++
T Consensus 22 ~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~--------------------- 75 (164)
T 1qtn_A 22 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHD--------------------- 75 (164)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------
T ss_pred CceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCE-----EEEec---------------------
Confidence 357999998765532 2333 47888999999999984 23333
Q ss_pred cccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHH
Q 017398 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (372)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M 204 (372)
++|.+.+...|+-- . .+ +-...|-+++++.+||..|.|.-.|+..+.-++|...|..-
T Consensus 76 -------------dlt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~ 133 (164)
T 1qtn_A 76 -------------DCTVEQIYEILKIY-Q------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 133 (164)
T ss_dssp -------------SCCHHHHHHHHHHH-H------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred -------------CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccc
Confidence 25788888888721 0 01 11346788999999999998888787656667776655431
Q ss_pred H-HcCCCceEEEEeeccccccc
Q 017398 205 H-ASGNYKSLVFYLEACESGSI 225 (372)
Q Consensus 205 ~-~~~~Ykklvf~vEAC~SGSm 225 (372)
. ..-.=|=.+|+|.||...-.
T Consensus 134 ~CpsL~gKPKlFfiQACRG~~~ 155 (164)
T 1qtn_A 134 KCPSLAGKPKVFFIQACQGDNY 155 (164)
T ss_dssp TCGGGTTSCEEEEEESCSSSBC
T ss_pred cChhhcCCCeEEEEECCCCCCc
Confidence 0 01123456899999987543
No 21
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=64.87 E-value=3.3 Score=37.15 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=77.6
Q ss_pred CCeEEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
....|+||.=.++.. .-|.- .|+-.+-+++++.|+. |..++
T Consensus 43 ~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~-----V~~~~---------------------------- 89 (179)
T 3p45_A 43 RRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN---------------------------- 89 (179)
T ss_dssp BCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE----------------------------
T ss_pred ccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 457899999887653 24443 5788999999999994 33333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (372)
++|.+.+...|.-- . .+ +-...|-+++.+..||..|.|.--|+. +.-++|.+.|.--+ ..=.=
T Consensus 90 ------dlt~~em~~~l~~~-~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~g 153 (179)
T 3p45_A 90 ------DLKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVG 153 (179)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-h------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhCC
Confidence 36888888888721 1 01 113468899999999999988887876 66666666554210 01133
Q ss_pred ceEEEEeecccccccc
Q 017398 211 KSLVFYLEACESGSIF 226 (372)
Q Consensus 211 kklvf~vEAC~SGSmf 226 (372)
|=.+|+|.||...-.=
T Consensus 154 KPKlFfIQACRG~~~d 169 (179)
T 3p45_A 154 KPKIFIIQACRGNQHD 169 (179)
T ss_dssp SCEEEEEECC------
T ss_pred CCcEEEEECCCCCCCC
Confidence 5668999999976543
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=64.02 E-value=2.5 Score=37.75 Aligned_cols=118 Identities=14% Similarity=0.206 Sum_probs=75.5
Q ss_pred CCeEEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCcccCCcc
Q 017398 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (372)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHq--ADv~~~Yq~Lk~~Gi~denIIlmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (372)
..-.|+||.=.++-. .-|.- .|+-.+-+++++.|+. |..++
T Consensus 43 ~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~-----V~v~~---------------------------- 89 (173)
T 2ql9_A 43 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 89 (173)
T ss_dssp EEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 456899998776543 23544 6788999999999983 23333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 017398 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (372)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (372)
++|.+.+...|+-- . .+ +-...|-+++++.+||..|.|.-.|+. +.-++|...+.--. ..=.=
T Consensus 90 ------dlt~~em~~~l~~~-s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~g 153 (173)
T 2ql9_A 90 ------DCSCAKMQDLLKKA-S------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLE 153 (173)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcC
Confidence 25778888888721 1 01 112357788999999999988777774 55555544432100 00133
Q ss_pred ceEEEEeecccccc
Q 017398 211 KSLVFYLEACESGS 224 (372)
Q Consensus 211 kklvf~vEAC~SGS 224 (372)
|=.+|+|.||...-
T Consensus 154 KPKlFfIQACRG~~ 167 (173)
T 2ql9_A 154 KPKLFFIQACRGTE 167 (173)
T ss_dssp SCEEEEEESCCSSB
T ss_pred CCeEEEEECCCCCC
Confidence 55688999998754
No 23
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=28.25 E-value=46 Score=31.11 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=24.5
Q ss_pred EEEeccCCCC-------------------CchhhhHHHHHHHHHHhC-CCCCCCEEE
Q 017398 63 VLLAGSNGFW-------------------NYRHQADICHAYQLLRKG-GLKDENIIV 99 (372)
Q Consensus 63 VLVagS~gw~-------------------NYRHqADv~~~Yq~Lk~~-Gi~denIIl 99 (372)
+||+|..|.. ..+-.|++ +-++|.+. |||++.|++
T Consensus 65 lIvSGG~g~~t~~~~~~v~~~~~y~~l~~~~~sEA~~--m~~~l~~~~GVp~~~Ill 119 (266)
T 3ca8_A 65 LLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATI--LADIAHQFWHIPHEKIWI 119 (266)
T ss_dssp EEEECCSSTTHHHHHHHHHTCTTGGGSCCTTSCHHHH--HHHHHHHTTCCCGGGEEE
T ss_pred EEEECCCCCcccchhhhhccccccccccCCCCCHHHH--HHHHHHHhcCCCHHHEEe
Confidence 6889887752 33344555 45678887 999999976
No 24
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=24.32 E-value=34 Score=33.51 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=19.8
Q ss_pred cCCCCCchhhhHHHH-HHHHHHhCCC
Q 017398 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (372)
Q Consensus 68 S~gw~NYRHqADv~~-~Yq~Lk~~Gi 92 (372)
.+-|.|++|.+||++ +|.+|++.++
T Consensus 96 ~npYHN~~HA~dV~q~~~~ll~~~~l 121 (359)
T 2r8q_A 96 RVPYHNFYHVVDVCQTLHTYLYTGKA 121 (359)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHTSCG
T ss_pred CCccccHHHHHHHHHHHHHHHHcccc
Confidence 467999999999985 6677776654
No 25
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=24.06 E-value=42 Score=32.72 Aligned_cols=25 Identities=20% Similarity=0.541 Sum_probs=19.9
Q ss_pred cCCCCCchhhhHHHH-HHHHHHhCCC
Q 017398 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (372)
Q Consensus 68 S~gw~NYRHqADv~~-~Yq~Lk~~Gi 92 (372)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 97 ~npYHN~~HA~dV~q~~~~ll~~~~l 122 (347)
T 1tbf_A 97 NVAYHNWRHAFNTAQCMFAALKAGKI 122 (347)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCcCHHHHHHHHHHHHHHHHcccc
Confidence 378999999999985 6777776654
No 26
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=22.56 E-value=32 Score=33.77 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=20.0
Q ss_pred CCCCCchhhhHHHH-HHHHHHhCCC
Q 017398 69 NGFWNYRHQADICH-AYQLLRKGGL 92 (372)
Q Consensus 69 ~gw~NYRHqADv~~-~Yq~Lk~~Gi 92 (372)
+-|.|++|.+||++ +|.+|.+.|+
T Consensus 79 npYHN~~HA~dV~q~~~~ll~~~~l 103 (365)
T 1taz_A 79 NPYHNQIHAADVTQTVHCFLLRTGM 103 (365)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHSG
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhhH
Confidence 57999999999986 5777887775
No 27
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=21.76 E-value=57 Score=25.92 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=26.1
Q ss_pred CCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCC
Q 017398 137 EDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGG 180 (372)
Q Consensus 137 ~~Vt~~nfl~vL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg 180 (372)
.+.|...|+.+|+ |.|+-.+++.||+|..+.-.
T Consensus 28 ~~~tv~~~~~~lR-----------krL~l~~~~alFlyVnn~~~ 60 (91)
T 4gdk_A 28 RTRTIQGLIDFIK-----------KFLKLVASEQLFIYVNQSFA 60 (91)
T ss_dssp TTCBHHHHHHHHH-----------HHTTCCSSSCCEEEETTTBC
T ss_pred CCCCHHHHHHHHH-----------HHhCCCCCCeEEEEECCccC
Confidence 4789999999999 34666788999999865443
No 28
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=21.65 E-value=29 Score=31.95 Aligned_cols=22 Identities=18% Similarity=0.459 Sum_probs=16.5
Q ss_pred CccccCCCCCeEEEEeecCCCC
Q 017398 160 GKVVDSGPNDHIFIFYSDHGGP 181 (372)
Q Consensus 160 ~kvl~S~~~D~VFIY~tgHGg~ 181 (372)
|++|+.=+++.|+||.||||.+
T Consensus 324 g~~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 324 PEIIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHHHTCCTTEEEEEECSSBCC
T ss_pred HHHHHhcCCCCEEEEEccCCCC
Confidence 4555544578899999999964
Done!