Query 017399
Match_columns 372
No_of_seqs 171 out of 208
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 13:47:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017399.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017399hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kvja_ d.58.17.1 (A:) Menkes 60.7 0.91 6.6E-05 32.8 0.2 49 269-317 11-68 (79)
2 d2aw0a_ d.58.17.1 (A:) Menkes 58.6 0.93 6.8E-05 32.1 -0.1 49 269-317 6-63 (72)
3 d1cpza_ d.58.17.1 (A:) Copper 57.3 1.3 9.2E-05 31.0 0.5 46 272-317 6-60 (68)
4 d2qifa1 d.58.17.1 (A:1-69) Cop 55.1 1 7.6E-05 31.6 -0.3 48 270-317 6-62 (69)
5 d1q8la_ d.58.17.1 (A:) Menkes 54.7 1.9 0.00014 31.5 1.2 49 270-319 13-71 (84)
6 d1osda_ d.58.17.1 (A:) Mercuri 53.8 1.2 8.8E-05 31.5 -0.1 48 270-317 7-63 (72)
7 d1sb6a_ d.58.17.1 (A:) Copper 50.2 3.1 0.00023 28.6 1.6 48 270-317 5-58 (64)
8 d1omza_ c.68.1.15 (A:) Alpha-1 48.5 53 0.0038 25.0 12.3 100 104-228 12-114 (265)
9 d1udxa3 d.242.1.1 (A:341-416) 48.1 4.4 0.00032 29.3 2.2 21 185-205 48-68 (76)
10 d1p6ta1 d.58.17.1 (A:1-72) Pot 47.3 1.2 8.9E-05 31.4 -1.0 48 270-317 10-66 (72)
11 d1jixa_ c.87.1.1 (A:) beta-Glu 46.6 12 0.00087 32.3 5.2 44 121-164 59-102 (351)
12 d2ggpb1 d.58.17.1 (B:1-72) Cop 46.1 2.8 0.00021 29.4 0.8 49 270-318 6-62 (72)
13 d1edmb_ g.3.11.1 (B:) Factor I 39.2 11 0.0008 23.6 2.9 21 46-69 19-39 (39)
14 d2bo4a1 c.68.1.18 (A:2-382) Ma 38.0 43 0.0031 30.7 8.1 106 100-217 4-113 (381)
15 d1cvua2 g.3.11.1 (A:33-73) Pro 37.0 7.3 0.00053 24.7 1.7 22 47-71 19-41 (41)
16 d2vj3a2 g.3.11.1 (A:453-491) N 33.6 6.4 0.00047 24.8 1.0 20 47-69 18-37 (39)
17 d2vj3a1 g.3.11.1 (A:411-452) N 26.5 10 0.00073 24.0 1.0 19 48-69 23-41 (42)
18 d1l3ya_ g.3.11.6 (A:) Integrin 25.2 15 0.0011 23.4 1.7 13 51-63 26-38 (41)
19 d1wi2a_ b.36.1.1 (A:) PDZ doma 25.1 41 0.003 24.6 4.6 38 192-233 57-97 (104)
20 d1xhba2 c.68.1.17 (A:95-422) P 24.8 1.1E+02 0.0078 25.6 8.1 94 101-217 28-128 (328)
21 d2i6va1 b.36.1.5 (A:219-305) G 21.5 71 0.0051 22.4 5.2 28 190-217 33-60 (87)
22 d1q4ga2 g.3.11.1 (A:32-73) Pro 21.3 18 0.0013 22.9 1.5 21 48-71 21-42 (42)
No 1
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.65 E-value=0.91 Score=32.81 Aligned_cols=49 Identities=18% Similarity=0.325 Sum_probs=33.5
Q ss_pred ccCCceeecccCccchHHHHHHHHhcccccc--cC-------ccccCCHHHHHHHHHc
Q 017399 269 ILSDAGWHCSFCFRHLHEIVFKMTAYSHADR--VK-------RLEFLNPSRIQKLICR 317 (372)
Q Consensus 269 ~l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d~--~~-------~~~~~d~~~I~~~I~~ 317 (372)
.+.-.|.||+.|-..++..+.++..-.+.+- .. .+...+.+.|.+.|.+
T Consensus 11 ~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 68 (79)
T d1kvja_ 11 TISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDD 68 (79)
T ss_dssp EEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 3456899999998888877777766655431 11 2344788888888765
No 2
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.61 E-value=0.93 Score=32.06 Aligned_cols=49 Identities=14% Similarity=0.311 Sum_probs=33.0
Q ss_pred ccCCceeecccCccchHHHHHHHHhcccccc--------cC-ccccCCHHHHHHHHHc
Q 017399 269 ILSDAGWHCSFCFRHLHEIVFKMTAYSHADR--------VK-RLEFLNPSRIQKLICR 317 (372)
Q Consensus 269 ~l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d~--------~~-~~~~~d~~~I~~~I~~ 317 (372)
.+.-.|.||+.|-..|++.+.++..-...+- +. .+...+++.|.+.|.+
T Consensus 6 ~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 63 (72)
T d2aw0a_ 6 VINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIED 63 (72)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 3455799999999998888888765543321 01 2345677888877764
No 3
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=57.31 E-value=1.3 Score=31.05 Aligned_cols=46 Identities=17% Similarity=0.291 Sum_probs=30.7
Q ss_pred CceeecccCccchHHHHHHHHhccccc--ccC-------ccccCCHHHHHHHHHc
Q 017399 272 DAGWHCSFCFRHLHEIVFKMTAYSHAD--RVK-------RLEFLNPSRIQKLICR 317 (372)
Q Consensus 272 ~aGWHCS~Cf~~i~~i~~Km~SfsH~d--~~~-------~~~~~d~~~I~~~I~~ 317 (372)
-.|.||+.|-..|+..+.++..-...+ ... .+...+++.|.+.|.+
T Consensus 6 V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~ 60 (68)
T d1cpza_ 6 VKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60 (68)
T ss_dssp ESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHT
T ss_pred ECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 369999999888887777776443222 111 2345688888888765
No 4
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=55.11 E-value=1 Score=31.56 Aligned_cols=48 Identities=17% Similarity=0.234 Sum_probs=31.3
Q ss_pred cCCceeecccCccchHHHHHHHHhccccc--ccC-------ccccCCHHHHHHHHHc
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSHAD--RVK-------RLEFLNPSRIQKLICR 317 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d--~~~-------~~~~~d~~~I~~~I~~ 317 (372)
+.-.|+||+.|-..|++.+.++..-...+ ... .++-.+.+.|++.|.+
T Consensus 6 l~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 62 (69)
T d2qifa1 6 LQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62 (69)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 34479999999888887777766543222 111 1334677888887764
No 5
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.69 E-value=1.9 Score=31.45 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=34.4
Q ss_pred cCCceeecccCccchHHHHHHHHhcccccccC----------ccccCCHHHHHHHHHcCC
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSHADRVK----------RLEFLNPSRIQKLICRGD 319 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d~~~----------~~~~~d~~~I~~~I~~G~ 319 (372)
+.-.|.||+.|-..|+..+.++..-.... ++ .+...+.+.|.+.|.+-.
T Consensus 13 l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~-vn~~~~~v~v~~~~~~~~~~~i~~~I~~~G 71 (84)
T d1q8la_ 13 MKVEGMTCHSCTSTIEGKIGKLQGVQRIK-VSLDNQEATIVYQPHLISVEEMKKQIEAMG 71 (84)
T ss_dssp EEECCTTTCSSCHHHHHHHHTCTTEEEEE-ECSTTTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred EEECCeEcHHHHHHHHHHHhcCCCceEEE-EECCCCEEceeecccccCHHHHHHHHHHhC
Confidence 45689999999998887777776554333 11 335578888888886543
No 6
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=53.83 E-value=1.2 Score=31.52 Aligned_cols=48 Identities=21% Similarity=0.228 Sum_probs=30.3
Q ss_pred cCCceeecccCccchHHHHHHHHhccccc--ccC-------ccccCCHHHHHHHHHc
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSHAD--RVK-------RLEFLNPSRIQKLICR 317 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d--~~~-------~~~~~d~~~I~~~I~~ 317 (372)
+.-.|+||+.|-..|+..+.++..-...+ +.+ .+.-.|.+.|.+.|.+
T Consensus 7 l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 7 LSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45579999999887776666665444333 111 2234677777777664
No 7
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=50.19 E-value=3.1 Score=28.56 Aligned_cols=48 Identities=15% Similarity=0.168 Sum_probs=32.3
Q ss_pred cCCceeecccCccchHHHHHHHHhccccccc------CccccCCHHHHHHHHHc
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSHADRV------KRLEFLNPSRIQKLICR 317 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d~~------~~~~~~d~~~I~~~I~~ 317 (372)
+.-.|.||+.|-..|+..+.++..-+..+.. .-..-.+++.|++.|.+
T Consensus 5 l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~ 58 (64)
T d1sb6a_ 5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58 (64)
T ss_dssp EECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHH
T ss_pred EEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHH
Confidence 3457899999999999888888766544411 01123677777777653
No 8
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.52 E-value=53 Score=25.05 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=55.3
Q ss_pred cChHHHHHHHHHHhC--ccccEEEEEEeCCCccCCCcccchhhhHHhhhcccCcEEEEEcCCccCCCCCCCChhhhhHHH
Q 017399 104 NNEVDLLEIRWRELN--PYVTKFVILESNTTFTGIPKPLFFSLNRARYAFAEGKIVHGVYSGRSSSVGLDKDPFVRESEQ 181 (372)
Q Consensus 104 ~~ElDlLEIRL~eL~--dvVD~FVIvES~~TftG~pKpl~f~~~~~rF~~~~~KIiy~~l~~~~~~~~~~~~~w~~E~~q 181 (372)
.|+-+.|+-=|+.|. ++.|.-|||-.+.|=- .+ +.-.+.......++++.. +. .+. ...
T Consensus 12 yn~~~~l~~~l~sl~~q~~~~~~iiV~d~~sd~-~~-----~~i~~~~~~~~~~~~~~~-~~------~g~------~~a 72 (265)
T d1omza_ 12 YNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEK-GP-----EELWNSLGPHPIPVIFKP-QT------ANK------MRN 72 (265)
T ss_dssp SSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCC-CT-----HHHHHHTCCCSSCEEEEE-CS------SCC------GGG
T ss_pred CCCHHHHHHHHHHHHcCCCcCeEEEEECCCCCc-cH-----HHHHHHhcccceEEEEec-CC------CCc------hhh
Confidence 466688888888886 6777777776553221 11 112223333333333332 11 011 012
Q ss_pred HHHHHHHhHhcCCCCCcEEEeeCCCCcCCHHHHHHh-hhcCCCCCceE
Q 017399 182 RKAINGLLCYAGISNDDLLIMSDADEIPSRHTMRLL-QWCDGVPPILH 228 (372)
Q Consensus 182 Rn~l~~~l~~~~~~~dDliI~SDvDEIP~~~~l~~L-k~cdg~p~~l~ 228 (372)
||. +++ ...+|.|++-|.|.++.|+.|+.+ +.....|....
T Consensus 73 ~n~---~~~---~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v 114 (265)
T d1omza_ 73 RLQ---VFP---EVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQII 114 (265)
T ss_dssp GGS---CCT---TCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEE
T ss_pred hhh---hHH---hCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcce
Confidence 331 222 248999999999999999999866 44444454433
No 9
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=48.10 E-value=4.4 Score=29.33 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=17.9
Q ss_pred HHHHhHhcCCCCCcEEEeeCC
Q 017399 185 INGLLCYAGISNDDLLIMSDA 205 (372)
Q Consensus 185 l~~~l~~~~~~~dDliI~SDv 205 (372)
+.+.|+.+|+++||.|.++|.
T Consensus 48 v~~~L~~~Gak~GD~V~Ig~~ 68 (76)
T d1udxa3 48 VEAALRAKGVRAGDLVRIGGL 68 (76)
T ss_dssp HHHHHHTTTCCTTCEEEETTE
T ss_pred hHHHHHHcCCCCCCEEEECCE
Confidence 345788899999999999985
No 10
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=47.26 E-value=1.2 Score=31.38 Aligned_cols=48 Identities=15% Similarity=0.235 Sum_probs=31.2
Q ss_pred cCCceeecccCccchHHHHHHHHhccc--cccc------C-ccccCCHHHHHHHHHc
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSH--ADRV------K-RLEFLNPSRIQKLICR 317 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH--~d~~------~-~~~~~d~~~I~~~I~~ 317 (372)
+.-.|.||+.|-..|++.+.++..-.- .++. . .+.-.+.+.|.+.|++
T Consensus 10 l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~ 66 (72)
T d1p6ta1 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEK 66 (72)
T ss_dssp EEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHH
T ss_pred EEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 456899999998888877777764421 1111 1 1345677788877754
No 11
>d1jixa_ c.87.1.1 (A:) beta-Glucosyltransferase (DNA-modifying) {Bacteriophage T4 [TaxId: 10665]}
Probab=46.58 E-value=12 Score=32.34 Aligned_cols=44 Identities=18% Similarity=0.101 Sum_probs=35.9
Q ss_pred ccEEEEEEeCCCccCCCcccchhhhHHhhhcccCcEEEEEcCCc
Q 017399 121 VTKFVILESNTTFTGIPKPLFFSLNRARYAFAEGKIVHGVYSGR 164 (372)
Q Consensus 121 VD~FVIvES~~TftG~pKpl~f~~~~~rF~~~~~KIiy~~l~~~ 164 (372)
-|..++|.|...|.|..-.|...+...-.++|++||-|..-+.+
T Consensus 59 ydrlivvnssinffggkpnlailsaqkfmakykskiyylftdir 102 (351)
T d1jixa_ 59 YDRLIVVNSSINFFGGKPNLAILSAQKFMAKYKSKIYYLFTDIR 102 (351)
T ss_dssp CSEEEEECCCCCCCSSSCCHHHHHHHHHHHHCCSCEEEEECSTT
T ss_pred cceEEEEcceeeecCCCCchhhhhHHHHHHHhhceeEEEEeeec
Confidence 48899999999999987777776554445999999999987654
No 12
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.11 E-value=2.8 Score=29.44 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=31.6
Q ss_pred cCCceeecccCccchHHHHHHHHhcccccc--------cCccccCCHHHHHHHHHcC
Q 017399 270 LSDAGWHCSFCFRHLHEIVFKMTAYSHADR--------VKRLEFLNPSRIQKLICRG 318 (372)
Q Consensus 270 l~~aGWHCS~Cf~~i~~i~~Km~SfsH~d~--------~~~~~~~d~~~I~~~I~~G 318 (372)
+.-.|.||+.|-..|+.-+.++..-...+- +..++-.+++.|++.|.+-
T Consensus 6 l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~ 62 (72)
T d2ggpb1 6 LAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDC 62 (72)
T ss_dssp EECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHT
T ss_pred EEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHh
Confidence 455799999998888877777765433321 1122335777788777653
No 13
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.24 E-value=11 Score=23.59 Aligned_cols=21 Identities=5% Similarity=-0.138 Sum_probs=16.6
Q ss_pred eecceeeeecCCCCCCCCCCCCCC
Q 017399 46 TYREKISYFFRPLWDKPPPPFQYL 69 (372)
Q Consensus 46 ~~~~~~~~~~~p~W~~~~~p~~~~ 69 (372)
......+|.|.|+|.|+. |.|
T Consensus 19 ~~~~~y~C~C~~g~~G~~---Cei 39 (39)
T d1edmb_ 19 DDINSYECWCPFGFEGKN---CEL 39 (39)
T ss_dssp EETTEEEEECCTTCCSTT---SCC
T ss_pred cCCCCEEEECCCCCCCCC---CCC
Confidence 345668999999999987 754
No 14
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=37.96 E-value=43 Score=30.70 Aligned_cols=106 Identities=16% Similarity=0.035 Sum_probs=56.0
Q ss_pred EEeecCh---HHHHHHHHHHhCccccEEEEEEeCCCccCCCcccchhhhHHhhhcccCcEEEEEcCCccCCCCCCCChhh
Q 017399 100 GIIFNNE---VDLLEIRWRELNPYVTKFVILESNTTFTGIPKPLFFSLNRARYAFAEGKIVHGVYSGRSSSVGLDKDPFV 176 (372)
Q Consensus 100 ~f~f~~E---lDlLEIRL~eL~dvVD~FVIvES~~TftG~pKpl~f~~~~~rF~~~~~KIiy~~l~~~~~~~~~~~~~w~ 176 (372)
++.|.|| +-...+|+-.-.+.+|..|++....+-|...-. ....+-....+..+...+..... +...+
T Consensus 4 VIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~----~~~~~~~~~~~~~v~~~~~~~l~-~~~~G---- 74 (381)
T d2bo4a1 4 VFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVE----RAAPEISRATGTPVSVRLQERLG-TLRPG---- 74 (381)
T ss_dssp EEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHH----HHHHHHHHHHSCCEEEEECCCCS-SSSSS----
T ss_pred EEEcCCCcHHHHHHHHHHHHhCCCeeEEEEEcCCCCCcHHHHH----HHhhhhhccccccchhhhhcccc-cccCC----
Confidence 4667776 334456777888999999999877654421110 01111111112222222221110 00111
Q ss_pred hhHHHHHHHHHHhHhcCCCCCcEEEeeCCCC-cCCHHHHHHh
Q 017399 177 RESEQRKAINGLLCYAGISNDDLLIMSDADE-IPSRHTMRLL 217 (372)
Q Consensus 177 ~E~~qRn~l~~~l~~~~~~~dDliI~SDvDE-IP~~~~l~~L 217 (372)
.-...+.++..++.. ..+|+|++-|+|= =++|+.+..|
T Consensus 75 KG~g~~~A~~~g~~~---a~gd~lvflDADl~~~~pe~i~~L 113 (381)
T d2bo4a1 75 KGDGMNTALRYFLEE---TQWERIHFYDADITSFGPDWITKA 113 (381)
T ss_dssp HHHHHHHHHHHHHHH---CCCSEEEECCTTCSSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHh---CCCCEEEEEcCCcCcCCHHHHHHH
Confidence 122345566655553 4799999999994 5778876655
No 15
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.03 E-value=7.3 Score=24.75 Aligned_cols=22 Identities=9% Similarity=-0.123 Sum_probs=18.1
Q ss_pred ecceeeeec-CCCCCCCCCCCCCCCe
Q 017399 47 YREKISYFF-RPLWDKPPPPFQYLPH 71 (372)
Q Consensus 47 ~~~~~~~~~-~p~W~~~~~p~~~~p~ 71 (372)
.....+|.| .|+|.|+. |.+|+
T Consensus 19 ~~~~y~C~C~~~gy~G~~---Ce~pe 41 (41)
T d1cvua2 19 GFDQYKCDCTRTGFYGEN---CTTPE 41 (41)
T ss_dssp ETTEEEEECTTSSEETTT---TCEEC
T ss_pred CCCCEEEeCcCCCcCCcC---cCcCC
Confidence 345789999 68999998 98885
No 16
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.57 E-value=6.4 Score=24.82 Aligned_cols=20 Identities=5% Similarity=-0.027 Sum_probs=16.0
Q ss_pred ecceeeeecCCCCCCCCCCCCCC
Q 017399 47 YREKISYFFRPLWDKPPPPFQYL 69 (372)
Q Consensus 47 ~~~~~~~~~~p~W~~~~~p~~~~ 69 (372)
.....+|.|.|+|.|+. |.+
T Consensus 18 ~~~~y~C~C~~G~~G~~---Ce~ 37 (39)
T d2vj3a2 18 QIGEFQCICMPGYEGVH---CEV 37 (39)
T ss_dssp CSSCEEEECCTTEESSS---SCE
T ss_pred CCCCEEEeCCCCCccCc---Cee
Confidence 34568999999999997 654
No 17
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.48 E-value=10 Score=24.00 Aligned_cols=19 Identities=5% Similarity=-0.085 Sum_probs=15.2
Q ss_pred cceeeeecCCCCCCCCCCCCCC
Q 017399 48 REKISYFFRPLWDKPPPPFQYL 69 (372)
Q Consensus 48 ~~~~~~~~~p~W~~~~~p~~~~ 69 (372)
....+|.|.|+|.|+. |.+
T Consensus 23 ~g~y~C~C~~G~~G~~---Ce~ 41 (42)
T d2vj3a1 23 LGSFECQCLQGYTGPR---CEI 41 (42)
T ss_dssp SSSEEEECCTTEESTT---SCE
T ss_pred CCCEEeECCCCCcCCC---CcC
Confidence 3458999999999986 653
No 18
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.24 E-value=15 Score=23.43 Aligned_cols=13 Identities=8% Similarity=0.023 Sum_probs=11.8
Q ss_pred eeeecCCCCCCCC
Q 017399 51 ISYFFRPLWDKPP 63 (372)
Q Consensus 51 ~~~~~~p~W~~~~ 63 (372)
..|.|.|+|.|++
T Consensus 26 G~C~C~~Gw~G~~ 38 (41)
T d1l3ya_ 26 GKCRCHPGFEGSA 38 (41)
T ss_dssp TEEEECTTCCTTT
T ss_pred CEEEcCCCCcccC
Confidence 4799999999997
No 19
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.09 E-value=41 Score=24.61 Aligned_cols=38 Identities=16% Similarity=0.359 Sum_probs=30.3
Q ss_pred cCCCCCcEEEee---CCCCcCCHHHHHHhhhcCCCCCceEEEEee
Q 017399 192 AGISNDDLLIMS---DADEIPSRHTMRLLQWCDGVPPILHLELKN 233 (372)
Q Consensus 192 ~~~~~dDliI~S---DvDEIP~~~~l~~Lk~cdg~p~~l~l~lr~ 233 (372)
+|++++|.||.= |+......+++++||.+. .+++..+.
T Consensus 57 ~GL~~GD~Il~VNg~~v~~~~~~ev~~llk~~~----~v~l~V~~ 97 (104)
T d1wi2a_ 57 AGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAR----EISMRVRF 97 (104)
T ss_dssp HTCCTTCEEEEETTEECSSCCHHHHHHHHHHSS----SEEEEEEC
T ss_pred cccccCCEEEEECCEECCCCCHHHHHHHHhcCC----eEEEEEEE
Confidence 479999999976 667777889999999875 46676654
No 20
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.78 E-value=1.1e+02 Score=25.60 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=54.1
Q ss_pred EeecCh-HHHHHHHHHHhC-----ccccEEEEEEeCCCccCCCcccchhhhHHh-hhcccCcEEEEEcCCccCCCCCCCC
Q 017399 101 IIFNNE-VDLLEIRWRELN-----PYVTKFVILESNTTFTGIPKPLFFSLNRAR-YAFAEGKIVHGVYSGRSSSVGLDKD 173 (372)
Q Consensus 101 f~f~~E-lDlLEIRL~eL~-----dvVD~FVIvES~~TftG~pKpl~f~~~~~r-F~~~~~KIiy~~l~~~~~~~~~~~~ 173 (372)
+...|| .+.|+-=|+.+. +.....|||....|-. . ..+..+. .+.+..+|.++..+.. .
T Consensus 28 Ip~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~-~-----~~~~l~~~~~~~~~~i~vi~~~~n------~-- 93 (328)
T d1xhba2 28 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERD-F-----LKRPLESYVKKLKVPVHVIRMEQR------S-- 93 (328)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCG-G-----GTHHHHHHHHSSSSCEEEEECSSC------C--
T ss_pred EeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChh-h-----HHHHHHHHHHhcCCCeEEEEeccc------c--
Confidence 444565 566654454442 2335789998665421 1 1112233 3556677877765421 1
Q ss_pred hhhhhHHHHHHHHHHhHhcCCCCCcEEEeeCCCCcCCHHHHHHh
Q 017399 174 PFVRESEQRKAINGLLCYAGISNDDLLIMSDADEIPSRHTMRLL 217 (372)
Q Consensus 174 ~w~~E~~qRn~l~~~l~~~~~~~dDliI~SDvDEIP~~~~l~~L 217 (372)
+.. ..|| .+++. ..+|+|++-|.|-++.|..|..|
T Consensus 94 G~~---~a~N---~Gi~~---a~gd~i~flD~D~~~~p~~l~~l 128 (328)
T d1xhba2 94 GLI---RARL---KGAAV---SRGQVITFLDAHCECTAGWLEPL 128 (328)
T ss_dssp CHH---HHHH---HHHHH---CCSSEEEEEESSEEECTTCHHHH
T ss_pred cch---HHHH---HHHHh---hhcceeeecCcccccChhHHHHH
Confidence 111 2244 34443 36999999999999999988765
No 21
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C, EpsC {Vibrio cholerae [TaxId: 666]}
Probab=21.47 E-value=71 Score=22.45 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=23.7
Q ss_pred HhcCCCCCcEEEeeCCCCcCCHHHHHHh
Q 017399 190 CYAGISNDDLLIMSDADEIPSRHTMRLL 217 (372)
Q Consensus 190 ~~~~~~~dDliI~SDvDEIP~~~~l~~L 217 (372)
..+|++++|+|+--|--.|-+++.+..+
T Consensus 33 ~~aGl~~GDiI~~ing~~v~~~~~~~~~ 60 (87)
T d2i6va1 33 ESIGLQDGDMAVALNGLDLTDPNVMNTL 60 (87)
T ss_dssp HHTTCCTTCEEEEETTEETTCHHHHHHH
T ss_pred HHCCCCCCCEEEEECCEEeecHHHHHHH
Confidence 4579999999999999999998866544
No 22
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}
Probab=21.27 E-value=18 Score=22.86 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=17.8
Q ss_pred cceeeeecCC-CCCCCCCCCCCCCe
Q 017399 48 REKISYFFRP-LWDKPPPPFQYLPH 71 (372)
Q Consensus 48 ~~~~~~~~~p-~W~~~~~p~~~~p~ 71 (372)
....+|.|.+ +|.|+. |.+||
T Consensus 21 ~~~y~C~C~~~G~~G~~---Ce~pe 42 (42)
T d1q4ga2 21 LDRYQCDCTRTGYSGPN---CTIPE 42 (42)
T ss_dssp TTEEEEECTTSSEETTT---TCEEC
T ss_pred CCCEEEECCCCCcCCcC---cCcCC
Confidence 5678999987 899998 98885
Done!