Your job contains 1 sequence.
>017401
MDSSTLFVTDAKNGGTGPKFTFYVFERSCCILVVLVLYPSPSPAPEREEEQSHNHNNFDH
EHHAHRFERPELDRQNVGVSHEGNFTRSDAASWTNVSDDTWPFIIVALTFWFFVSMTLIL
GVYGPENLTLGPKSSILLQPSPFFVQKVKVQEIYELKPGPKLYAFYNSPPLDTVSTWSEK
IIVSVPADSHQEWIIYLNKGSQINISYSVKSPGSSVFLIIAQGNEGLRQWLFDPTFPNTT
LSWNVIQGSGVIHQHIFTSSSYYVGLGNLNSEEVEVQLNLRLRAFLYNTSDAYYKCTFAD
GLCSLSVLFPNGNAIVLTSPKTEQDTSNDNWQVRVSYEPRWLSYVVGICIFIPHFLLVAY
HSIKRFYHFLLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017401
(372 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179187 - symbol:APD2 "ABERRANT POLLEN DEVELOP... 667 1.5e-65 1
TAIR|locus:2042922 - symbol:APD3 "ABERRANT POLLEN DEVELOP... 518 9.5e-50 1
TAIR|locus:4515102961 - symbol:APD4 "ABERRANT POLLEN DEVE... 502 4.7e-48 1
>TAIR|locus:2179187 [details] [associations]
symbol:APD2 "ABERRANT POLLEN DEVELOPMENT 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000005728
EMBL:BT015052 EMBL:BT015858 EMBL:AK229004 IPI:IPI00542458
RefSeq:NP_195765.3 UniGene:At.4685 ProteinModelPortal:Q6DBH0
SMR:Q6DBH0 PaxDb:Q6DBH0 PRIDE:Q6DBH0 EnsemblPlants:AT5G01450.1
GeneID:831860 KEGG:ath:AT5G01450 TAIR:At5g01450 eggNOG:NOG284846
InParanoid:Q6DBH0 OMA:TRIAETS PhylomeDB:Q6DBH0
ProtClustDB:CLSN2918608 Genevestigator:Q6DBH0 Uniprot:Q6DBH0
Length = 444
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 134/310 (43%), Positives = 198/310 (63%)
Query: 54 NHNNFDHEHHAHRFERPELDRQNVGVSHEGNFTRSDAASWTNVSDDTWPFIIVALTFWFF 113
N + FDH +RP +R H G+ S+ + S+D W ++V TF F
Sbjct: 31 NDSGFDHR------DRPPWNRSEYDYRH-GSVVASENVRNNSTSEDPWSCVVVVATFCIF 83
Query: 114 VSMTLILGVYGPENLTLGPKSSILLQPSPFFVQKVKVQEIYELKPGPKLYAFYNSPPLDT 173
VSMTLILG+YG N+ LGP SS L++P+ FVQ V V+E+ G LY +P LD
Sbjct: 84 VSMTLILGLYGTTNVWLGPNSSFLIKPTSVFVQNVIVEELGNKGSGLILYGLNQAPQLDV 143
Query: 174 VSTWSEKIIVSVPADSHQEWIIYLNKGSQINISYSVKSPGSSVFLIIAQGNEGLRQWLFD 233
++ WSE ++VP DS++ WI YLNKGS++ +SY+V+S GSS++L+IAQG +GL +W+ D
Sbjct: 144 LTKWSEVHYLAVPNDSYKYWIQYLNKGSRVKVSYNVESVGSSLYLVIAQGVDGLSEWVQD 203
Query: 234 PTFPNTTLSWNVIQGSGVIHQHIFTSSSYYVGLGNLNSEEVEVQLNLRLRAFLYNTSDAY 293
PT P+TTLSW++I SG I Q I SSSYYV +GN+ EV+ +++++ LY+T++AY
Sbjct: 204 PTRPDTTLSWHIISDSGYIEQDITKSSSYYVAVGNVYLNEVKATIDIQVEGVLYDTTNAY 263
Query: 294 YKCTFADGLCSLSVLFPNGNAIVLTSPKTEQDTSNDNWQVRVSYEPRWLSYVVGICIFIP 353
Y C+F + C+LSV NA VLTSP + + S + + ++SYEPRW++Y+V C+ +
Sbjct: 264 YNCSFPNDKCTLSVPLFGTNAAVLTSPGPKLNNSKNEFCAKLSYEPRWIAYIV--CMGVV 321
Query: 354 HFLLVAYHSI 363
LL+ S+
Sbjct: 322 TALLLIVSSL 331
>TAIR|locus:2042922 [details] [associations]
symbol:APD3 "ABERRANT POLLEN DEVELOPMENT 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC003028
eggNOG:NOG121302 IPI:IPI00528340 RefSeq:NP_181357.2
UniGene:At.53065 ProteinModelPortal:B3H754 SMR:B3H754
EnsemblPlants:AT2G38220.1 GeneID:818401 KEGG:ath:AT2G38220
TAIR:At2g38220 HOGENOM:HOG000005728 PhylomeDB:B3H754
ProtClustDB:CLSN2708479 Genevestigator:B3H754 Uniprot:B3H754
Length = 404
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 116/286 (40%), Positives = 175/286 (61%)
Query: 88 SDAASWTNVSDDTWPFIIVALTFWFFVSMTLILGVYGPENLTLGPKSSILLQPSPFFVQK 147
SD +SW +S + II+ L WFF S+ LI GVYG E + LGP SSIL++PS FV+
Sbjct: 29 SDESSWGLLSLSCFG-IIMGL--WFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKS 85
Query: 148 VKVQEIYELKPGPKLYAFYN-SPPLDTVSTWSEKIIVSVPADSHQEWIIYLNKGSQINIS 206
+KV+E+ KPG +LY F S P W+E ++SV +S++ W YLN+G+ +NIS
Sbjct: 86 IKVKELDFSKPGLQLYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNIS 145
Query: 207 YSVKSPGSSVFLIIAQGNE--GL----RQWLFDPTFPNTTLSWNVIQGSGVIHQHIFTSS 260
Y++ GS+V L+I +G++ G+ R L D F +T SWN+IQGSG+I I S
Sbjct: 146 YNILPKGSAVRLVITEGSQVIGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSK 205
Query: 261 SYYVGLGNLNSEEVEVQLNLRLRAFLYNTSDAYYKCTFADGLCSLSV--LFPNGNAIVLT 318
YY+ + NL +++EV+L++ ++A LY+T Y C+F++G CS + +P N V+T
Sbjct: 206 GYYLTVANLKRKDIEVELDIDVKAVLYDTKQTSYNCSFSNGECSFKMNERYPVENYAVVT 265
Query: 319 SPKTEQDTS-NDNWQVRVSYEPRWLSY--VVGICIFIPHFLLVAYH 361
SP Q S +D W + +SY+PR ++Y G+ + F+LVA H
Sbjct: 266 SPALGQGVSIDDEWYIELSYQPRLIAYGSFTGVLL---SFMLVAIH 308
>TAIR|locus:4515102961 [details] [associations]
symbol:APD4 "ABERRANT POLLEN DEVELOPMENT 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:At.53065 IPI:IPI00891934 RefSeq:NP_001118468.1
UniGene:At.73935 ProteinModelPortal:F4ISV9 SMR:F4ISV9
EnsemblPlants:AT2G38195.1 GeneID:6240532 KEGG:ath:AT2G38195
Uniprot:F4ISV9
Length = 399
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 113/281 (40%), Positives = 168/281 (59%)
Query: 88 SDAASWTNVSDDTWPFIIVALTFWFFVSMTLILGVYGPENLTLGPKSSILLQPSPFFVQK 147
SD +SW +S + II+ L WFF S+ LI GVYG E + LGP SSIL++PS FV+
Sbjct: 29 SDESSWGLLSLSCFG-IIMGL--WFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKS 85
Query: 148 VKVQEIYELKPGPKLYAFYN-SPPLDTVSTWSEKIIVSVPADSHQEWIIYLNKGSQINIS 206
+ +E+ KPG +LY F S P W+E ++SV +S++ W YLN+G+ +NIS
Sbjct: 86 INAKELDFSKPGLQLYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNIS 145
Query: 207 YSVKSPGSSVFLIIAQGNEGL-RQWLFDPTFPNTTLSWNVIQGSGVIHQHIFTSSSYYVG 265
Y++ GS+V L+I +G R L D F +T SWN+IQGSG+I I S YY+
Sbjct: 146 YNILPKGSAVRLVITEGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLT 205
Query: 266 LGNLNSEEVEVQLNLRLRAFLYNTSDAYYKCTFADGLCSLSV--LFPNGNAIVLTSPKTE 323
+ NL ++VEV+L++ ++ LY+T + Y C+F++G CS + P N V+TSP
Sbjct: 206 VANLKRKDVEVELDIDVKVVLYDTKQSSYNCSFSNGECSFKMNERSPVENYAVVTSPALG 265
Query: 324 QDTS-NDNWQVRVSYEPRWLSY--VVGICIFIPHFLLVAYH 361
Q S +D W + +SY+PR ++Y G+ + F+LVA H
Sbjct: 266 QGVSIDDEWYIELSYQPRLIAYGSFTGVLL---SFMLVAIH 303
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 372 358 0.00081 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 629 (67 KB)
Total size of DFA: 278 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.07u 0.10s 28.17t Elapsed: 00:00:01
Total cpu time: 28.07u 0.10s 28.17t Elapsed: 00:00:01
Start: Sat May 11 09:58:42 2013 End: Sat May 11 09:58:43 2013