Your job contains 1 sequence.
>017402
MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI
PNHALRSLISNFTRTPLPKPQLEHANPNPQTLISVLTSKSSPLESKLESLTQLTKLSKRD
SASRRKLTESGAVSAVLNCLKIHSDGFTLQEKALSLLLNLSLDDDNKVGLVAEGAVSRVV
AALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATA
LYALTSFPENRKRVVSCGAVPILMRLADAGLERAVEVLSILVKCKEGREEMMRVSGCVGV
FVKMLKTGSSRAVQCSLFTLSCLCCCSQEICGDSRKEGVLDICMGLLEDDNEKVRRNANN
LIQTLSGNPSMQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017402
(372 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 1005 2.3e-101 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 436 4.6e-41 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 414 3.9e-38 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 405 3.0e-37 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 399 1.1e-36 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 396 3.0e-36 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 393 4.8e-36 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 241 9.7e-36 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 387 1.9e-35 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 229 6.1e-32 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 284 1.3e-24 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 275 4.8e-23 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 252 3.0e-21 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 192 3.8e-21 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 250 2.6e-20 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 246 2.6e-20 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 181 3.5e-20 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 207 8.6e-20 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 183 1.5e-19 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 174 4.9e-19 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 153 7.1e-19 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 185 9.1e-19 2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 235 1.1e-18 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 195 1.6e-18 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 236 2.4e-18 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 232 3.6e-18 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 195 6.7e-18 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 229 2.5e-17 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 158 2.9e-17 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 188 1.4e-15 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 181 1.5e-15 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 178 1.9e-15 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 218 2.5e-15 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 132 3.0e-15 3
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 208 1.6e-14 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 207 1.9e-14 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 201 1.5e-13 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 196 4.3e-13 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 178 5.6e-13 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 173 1.2e-12 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 170 1.6e-10 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 170 4.5e-10 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 170 7.1e-10 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 164 2.5e-09 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 162 4.9e-09 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 161 5.5e-09 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 159 9.7e-09 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 155 1.1e-08 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 158 1.2e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 158 1.2e-08 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 157 1.6e-08 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 158 2.7e-08 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 153 3.2e-08 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 152 5.3e-08 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 155 5.9e-08 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 152 1.3e-07 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 151 1.7e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 147 1.8e-07 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 150 2.1e-07 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 146 2.7e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 146 2.8e-07 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 143 1.4e-06 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 110 1.7e-06 2
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 134 3.8e-06 1
UNIPROTKB|E1BKW8 - symbol:TRIM65 "Uncharacterized protein... 136 4.1e-06 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 114 6.4e-06 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 132 7.9e-06 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 134 1.3e-05 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 132 2.1e-05 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 127 4.9e-05 1
UNIPROTKB|F1NH39 - symbol:F1NH39 "Uncharacterized protein... 122 0.00010 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 126 0.00011 1
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 119 0.00012 1
ZFIN|ZDB-GENE-030131-6081 - symbol:trim35-40 "tripartite ... 120 0.00012 2
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 118 0.00014 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 117 0.00016 1
ASPGD|ASPL0000001660 - symbol:AN5906 species:162425 "Emer... 117 0.00020 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 120 0.00022 1
DICTYBASE|DDB_G0283193 - symbol:DDB_G0283193 species:4468... 118 0.00023 1
UNIPROTKB|Q5BN31 - symbol:TRIM5 "Tripartite motif-contain... 120 0.00024 1
UNIPROTKB|Q5D7I0 - symbol:TRIM5 "Tripartite motif-contain... 120 0.00024 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 114 0.00024 1
DICTYBASE|DDB_G0270014 - symbol:DDB_G0270014 species:4468... 112 0.00029 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 120 0.00030 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 114 0.00031 1
UNIPROTKB|E2RFB0 - symbol:TRIM50 "Uncharacterized protein... 118 0.00039 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 114 0.00042 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 114 0.00047 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 114 0.00048 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 114 0.00048 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 114 0.00048 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 114 0.00048 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 94 0.00049 1
UNIPROTKB|Q865W2 - symbol:TRIM50 "E3 ubiquitin-protein li... 117 0.00049 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 114 0.00051 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 114 0.00053 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 114 0.00079 1
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 92 0.00081 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 92 0.00081 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 100 0.00087 1
WARNING: Descriptions of 4 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 209/374 (55%), Positives = 259/374 (69%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
MA P+DF+CPISLEIMSDPVIL SGHTFDR SIQ+W+DSG+RTCPITKLPL + P LI
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60
Query: 61 PNHALRSLISNFTRTPL-----PKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTK 115
PNHALRSLI NF L P+ Q EH++ Q LIS +L +
Sbjct: 61 PNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGA 175
L+KRDS+ RRK+TESGAV A L+C + S LQEK+ KVGLVA+G
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDC--VDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGV 178
Query: 176 VSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKK 235
+ R+V LR GSPDC+AIAAT++TSLAVVEVNKATIG YP AI+ALVSLL+ G RE+K
Sbjct: 179 IRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGN-DRERK 237
Query: 236 EAATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVEVLSILVKCKEGREEMMRVS 295
E+ATALYAL SFP+NRKRVV CG+VPIL+ AD+GLERAVEVL +LVKC+ GREEM +VS
Sbjct: 238 ESATALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVKCRGGREEMSKVS 297
Query: 296 GCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDDNEKVR 355
G V V V +L+ G+ + +Q EI + ++EGV++IC G ++++EK+R
Sbjct: 298 GFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKIR 357
Query: 356 RNANNLIQTLSGNP 369
RNA L+ TL G P
Sbjct: 358 RNATILVHTLLGIP 371
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 128/376 (34%), Positives = 196/376 (52%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
PD+F+CPISLE+M DPVI+SSG T++R+ IQ+WLDSGH+TCP T+ PL SL PN L
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPL-SHTSLTPNFVL 287
Query: 66 RSLISNFTRT---PLPKPQ--------LEHANPNPQTLISVXXXXXXXXXXXXXXXX-QL 113
+SLIS + LPK + + ++ + L+S+ ++
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 114 TKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE 173
L+KR+ +R + E+GA+ ++N L SD T QE A K +V
Sbjct: 348 RLLAKRNVNNRICIAEAGAIPLLVNLLS-SSDPRT-QEHAVTALLNLSIHENNKASIVDS 405
Query: 174 GAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIRE 233
A+ ++V L+ GS + R AA + SL+VV+ NK TIG AI L++LL +G R
Sbjct: 406 HAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAG-AIPPLINLLCDGSP-RG 463
Query: 234 KKEAATALYALTSFPENRKRVVSCGAVPILMR-LAD-AG--LERAVEVLSILVKCKEGRE 289
KK+AATA++ L + N+ R V G V LM L D G ++ A+ +LSIL EG+
Sbjct: 464 KKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKI 523
Query: 290 EMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLED 349
+ R S + V+++KTGS R + E ++ GV D L E
Sbjct: 524 VIAR-SEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSET 582
Query: 350 DNEKVRRNANNLIQTL 365
++ +R A+++++ +
Sbjct: 583 GTDRAKRKASSILELM 598
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 414 (150.8 bits), Expect = 3.9e-38, P = 3.9e-38
Identities = 119/378 (31%), Positives = 185/378 (48%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
PD+F+CPISLE+M DPVI+S+G T++RA I++W+ SGH TCP T+ + +L PN+ L
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTS-ALTPNYVL 332
Query: 66 RSLISNFTRTPLPKPQLEHANPN-PQTLISVXXXXXXXXXXXX----------XXXXQLT 114
RSLIS + T +P PN P S +L
Sbjct: 333 RSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELR 392
Query: 115 KLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEG 174
L+KR++ +R + E+GA+ +L+ L S QE A K +++ G
Sbjct: 393 LLAKRNANNRICIAEAGAIPLLLSLLS--SSDLRTQEHAVTALLNLSIHEDNKASIISSG 450
Query: 175 AVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREK 234
AV +V L+ GS + R AA + SL+V++ K TIG AI ALV LL G R K
Sbjct: 451 AVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMG-AIPALVVLLGEGSQ-RGK 508
Query: 235 KEAATALYALTSFPENRKRVVSCGAVPILMRLAD----AGLERAVEVLSILVKCKEGREE 290
K+AA AL+ L + N+ R + G VP++M L A ++ A+ +LSIL EG+
Sbjct: 509 KDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAA 568
Query: 291 MMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKE--GVLDICMGLLE 348
+ V V V+M+ +G+ R + + +R + G++ L
Sbjct: 569 IGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELAL 627
Query: 349 DDNEKVRRNANNLIQTLS 366
+ ++ +R A L++ +S
Sbjct: 628 NGTDRGKRKAVQLLERMS 645
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 405 (147.6 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 115/378 (30%), Positives = 188/378 (49%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
PDDF+CPISLE+M DPVI+SSG T++R I++W++ GH TCP T+ L +L PN+ L
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTST-TLTPNYVL 315
Query: 66 RSLIS-----NFTRTPLPKPQLE------HANPNPQTLIS--VXXXXXXXXXXXXXXXXQ 112
RSLI+ N P P L ++P I + +
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
+ L+KR++ +R + E+GA+ ++ L +QE + K +V+
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDS--RIQEHSVTALLNLSICENNKGAIVS 433
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIR 232
GA+ +V L+ GS + R AA + SL+V++ NK TIG AI LV LL G R
Sbjct: 434 AGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALG-AIPPLVVLLNEGTQ-R 491
Query: 233 EKKEAATALYALTSFPENRKRVVSCGAVPILMRL-ADAG---LERAVEVLSILVKCKEGR 288
KK+AATAL+ L + N+ + + G +P L RL + G ++ A+ +L+IL EG+
Sbjct: 492 GKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGK 551
Query: 289 EEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLE 348
++ S V V+ ++TGS R + + +++K G++ + L
Sbjct: 552 A-IIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAG 610
Query: 349 DDNEKVRRNANNLIQTLS 366
+ ++ +R A L++ +S
Sbjct: 611 NGTDRGKRKAAQLLERIS 628
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 399 (145.5 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 118/379 (31%), Positives = 196/379 (51%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P+ F+CPISLE+M DPVI+S+G T++R+SIQ+WLD+GH+TCP ++ L L PN+ L
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL-HAGLTPNYVL 307
Query: 66 RSLISNFTRT---PLPKPQLE---------HANPNPQTLIS--VXXXXXXXXXXXXXXXX 111
+SLI+ + + LP+ Q ++ +T + +
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+L L+KR+ +R + E+GA+ ++ L D T QE + K +V
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLS-SPDPRT-QEHSVTALLNLSINEGNKGAIV 425
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
GA++ +V L+ GS + R AA + SL+V++ NK IG AI AL+SLL+ G
Sbjct: 426 DAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAG-AIQALISLLEEGTR- 483
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAG---LERAVEVLSILVKCKEG 287
R KK+AATA++ L + N+ R V G V P+ L DAG ++ A+ +L+IL +EG
Sbjct: 484 RGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEG 543
Query: 288 REEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMG-L 346
+ + + V V++++TGS R + E +R+ G D+ + L
Sbjct: 544 KTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGA-DVALKEL 601
Query: 347 LEDDNEKVRRNANNLIQTL 365
E+ ++ +R A +L++ +
Sbjct: 602 TENGTDRAKRKAASLLELI 620
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 396 (144.5 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 108/371 (29%), Positives = 182/371 (49%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P +F CPI+LEIM DPVI+++G T+++ SIQ+W D+GH+TCP T+ L D SL PN AL
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQEL-DHLSLAPNFAL 349
Query: 66 RSLISNFTRT---PLPKPQLEHANPNPQ---TLISVXXXXXXXXXXXXXXXXQLTKLSKR 119
++LI + +P+ ++ + N Q + V Q+ L++
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARE 409
Query: 120 DSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRV 179
+ +R + +GA+ ++ L G +QE A K + EGA+ +
Sbjct: 410 NPENRVLIANAGAIPLLVQLLSYPDSG--IQENAVTTLLNLSIDEVNKKLISNEGAIPNI 467
Query: 180 VAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAAT 239
+ L G+ + R +A + SL++++ NK TIG I LV LLQ+G L R KK+A T
Sbjct: 468 IEILENGNREARENSAAALFSLSMLDENKVTIG-LSNGIPPLVDLLQHGTL-RGKKDALT 525
Query: 240 ALYALTSFPENRKRVVSCGAV-PILMRLADAGL---ERAVEVLSILVKCKEGREEMMRVS 295
AL+ L+ N+ R + G V P+L L D L + A+ +L +L EGR+ + ++S
Sbjct: 526 ALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLS 585
Query: 296 GCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDDNEKVR 355
+ V+ ++ G+ + + + + GV + + + + +
Sbjct: 586 -FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQ 644
Query: 356 RNANNLIQTLS 366
R AN LIQ +S
Sbjct: 645 RKANALIQLIS 655
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 393 (143.4 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 119/381 (31%), Positives = 190/381 (49%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P+DF CPISLE+M DP I+S+G T++R+ IQRW+D G+ +CP T+ L + +L PN+ L
Sbjct: 244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKL-ENFTLTPNYVL 302
Query: 66 RSLISNF-TRTPLPKP------QLEHANPNPQTLIS--------VXXXXXXXXXXXXXXX 110
RSLIS + T+ + +P + ++++ + + L V
Sbjct: 303 RSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAV 362
Query: 111 XQLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFT-LQEKAXXXXXXXXXXXXXKVG 169
++ LSKR + +R + E+GA+ ++ L SDG T QE A K
Sbjct: 363 SEIRSLSKRSTDNRILIAEAGAIPVLVKLLT--SDGDTETQENAVTCILNLSIYEHNKEL 420
Query: 170 LVAEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGK 229
++ GAV+ +V LR GS + R AA + SL++ + NK IG AI ALV LLQ G
Sbjct: 421 IMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASG-AIMALVDLLQYGS 479
Query: 230 LIREKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAGLER----AVEVLSILVKC 284
+R KK+AATAL+ L + N+ R V G V P++ L D+ ER A+ +LS+L
Sbjct: 480 -VRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASN 538
Query: 285 KEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICM 344
+ + ++R + + + K +++ R V+ + M
Sbjct: 539 QVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPL-M 597
Query: 345 GLLEDDNEKVRRNANNLIQTL 365
L D E+ +R AN+L++ L
Sbjct: 598 ELSRDGTERAKRKANSLLELL 618
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 241 (89.9 bits), Expect = 9.7e-36, Sum P(2) = 9.7e-36
Identities = 76/254 (29%), Positives = 121/254 (47%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+L L+K + +R + SGA+ ++ L +D T QE A K +
Sbjct: 567 ELRLLAKHNMDNRIVIGNSGAIVLLVELL-YSTDSAT-QENAVTALLNLSINDNNKKAIA 624
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
GA+ ++ L GS + + +A + SL+V+E NK IG AI LV LL NG
Sbjct: 625 DAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSG-AIGPLVDLLGNGTP- 682
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAVPILMRLAD--AGL-ERAVEVLSILVKCKEGR 288
R KK+AATAL+ L+ EN+ +V GAV L+ L D AG+ ++AV VL+ L EGR
Sbjct: 683 RGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGR 742
Query: 289 EEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLE 348
+ + G + + V++++ GS+R + C +EG + + L +
Sbjct: 743 NAIGQEGG-IPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQ 801
Query: 349 DDNEKVRRNANNLI 362
+ R A L+
Sbjct: 802 SGTPRAREKAQALL 815
Score = 192 (72.6 bits), Expect = 9.7e-36, Sum P(2) = 9.7e-36
Identities = 37/76 (48%), Positives = 55/76 (72%)
Query: 8 DFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALRS 67
DF CP+SLE+M+DPVI+SSG T+++A I+RW+D G + CP T+ L +LIPN+ +++
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLT-HTTLIPNYTVKA 294
Query: 68 LISNFTRT---PLPKP 80
LI+N+ T LP P
Sbjct: 295 LIANWCETNDVKLPDP 310
Score = 58 (25.5 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 218 INALVSLLQNGKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLA----DAGLER 273
+ LV L++ L +++ A +NR + + GA+ +L+ L A E
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQEN 605
Query: 274 AVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKTGSSRA 312
AV L + + + ++ + +G + + +L+ GSS A
Sbjct: 606 AVTAL-LNLSINDNNKKAIADAGAIEPLIHVLENGSSEA 643
Score = 51 (23.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 123 SRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAA 182
++ + +SGAV +++ + + G +KA + + EG + +V
Sbjct: 701 NKAMIVQSGAVRYLIDLMD-PAAGMV--DKAVAVLANLATIPEGRNAIGQEGGIPLLVEV 757
Query: 183 LRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGK-LIREKKEAATAL 241
+ GS + AA + L+ + A+ LV+L Q+G REK +A +
Sbjct: 758 VELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSY 817
Query: 242 Y 242
+
Sbjct: 818 F 818
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 387 (141.3 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 115/372 (30%), Positives = 187/372 (50%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P DF CP+SLE+M DPVI+++G T++RA IQRW+D G+ TCP T+ L + +L PN+ L
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKL-ENFTLTPNYVL 300
Query: 66 RSLISNF-TRTPLPKP----QLEHANPNPQTLIS--VXXXXXXXXXXXXXXXXQLTKLSK 118
RSLIS + + +P N ++I V ++ LSK
Sbjct: 301 RSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 360
Query: 119 RDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSR 178
R + +R + E+GA+ ++N L S+ QE A K ++ GAV+
Sbjct: 361 RSTDNRILIAEAGAIPVLVNLLT--SEDVATQENAITCVLNLSIYENNKELIMFAGAVTS 418
Query: 179 VVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAA 238
+V LR G+ + R AA + SL++ + NK IG AI ALV LL+NG R KK+AA
Sbjct: 419 IVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSG-AIPALVDLLENGTP-RGKKDAA 476
Query: 239 TALYALTSFPENRKRVVSCGAVPILMR-LADAGLERAVE----VLSILVKCKEGREEMMR 293
TAL+ L + N+ R V G V L++ L+D+ R V+ +LS+L ++ + +++
Sbjct: 477 TALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVK 536
Query: 294 VSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDDNEK 353
+ + + +L+T +R + E + G + M L ++ E+
Sbjct: 537 AN-TLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTER 595
Query: 354 VRRNANNLIQTL 365
+R A +L++ L
Sbjct: 596 GKRKAISLLELL 607
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 229 (85.7 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 70/254 (27%), Positives = 121/254 (47%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
++ L+ +R + GA++ +L+ L +S+ QE A K +V
Sbjct: 495 EIRHLTINSIENRVHIGRCGAITPLLSLL--YSEEKLTQEHAVTALLNLSISELNKAMIV 552
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
GA+ +V L G+ + +A + SL+V++VN+ IG AI ALV+LL G
Sbjct: 553 EVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF- 611
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLE---RAVEVLSILVKCKEGR 288
R KK+AA+AL+ L+ +N+ R+V AV L+ L D LE +AV +L+ L EGR
Sbjct: 612 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGR 671
Query: 289 EEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLE 348
+ ++R G + + V+ + GS R + + C +EG + + L +
Sbjct: 672 QAIVREGG-IPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQ 730
Query: 349 DDNEKVRRNANNLI 362
++ + A L+
Sbjct: 731 SGTQRAKEKAQQLL 744
Score = 182 (69.1 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F+CP+S E+M DPVI++SG TFDR SI++WLD+G CP T+ L Q LIPN+ +
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQ-ELIPNYTV 297
Query: 66 RSLISNF 72
+++I+++
Sbjct: 298 KAMIASW 304
Score = 100 (40.3 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 40/148 (27%), Positives = 70/148 (47%)
Query: 169 GLVAEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEV-NKATIGDYPYAINALVSLLQN 227
G + ++V L+ GS + AA I L + + N+ IG AI L+SLL +
Sbjct: 467 GTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCG-AITPLLSLLYS 525
Query: 228 GKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVE--VLSI--LVK 283
+ + ++ A TAL L+ N+ +V GA+ L+ + + G +RA E S+ L
Sbjct: 526 EEKLTQE-HAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSV 584
Query: 284 CKEGREEMMRVSGCVGVFVKMLKTGSSR 311
+ RE + + + + V +L G+ R
Sbjct: 585 LQVNRERIGQSNAAIQALVNLLGKGTFR 612
Score = 73 (30.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 221 LVSLLQNGKLIREKKEAATALYALT-SFPENRKRVVSCGAV-PILMRL-ADAGLERAVEV 277
LV L++G + K AA + LT + ENR + CGA+ P+L L ++ L + V
Sbjct: 477 LVEDLKSGSN-KVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAV 535
Query: 278 LSIL-VKCKEGREEMMRVSGCVGVFVKMLKTGSSRA 312
++L + E + M+ G + V +L TG+ RA
Sbjct: 536 TALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRA 571
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 284 (105.0 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 102/384 (26%), Positives = 169/384 (44%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P++F+CP+S E+M DPV+L+SG T+D+ IQ+WL SG+RTCP T+ LP +L PN +
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLP-HTALTPNLLI 133
Query: 66 RSLISNFTR-TPLPKPQLEHAN-PNPQTLIS----------VXXXXXXXXXXXXXXXXQL 113
R +IS + + L H N N ++ + +L
Sbjct: 134 REMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKEL 193
Query: 114 TKLSKRDSASRRKLTES-GAVSAVLNCLKIHSDG--FTLQEKAXXXXXXXXXXXXXKVGL 170
L+++ + R ES ++ ++N L +H LQE L
Sbjct: 194 RLLTRKGTEFRALFGESPDEITRLVNPL-LHGSNPDEKLQEDVVTTLLNISIHDDSNKKL 252
Query: 171 VAEG--AVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNG 228
V E + ++ ALR G+ R+ AA I +L+ ++ NK IG + L+ LL+ G
Sbjct: 253 VCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGI-LKPLIDLLEEG 311
Query: 229 KLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGL--ERAVEVLSILVKCKE 286
+ K + A A++ L ENR R V GAV +L + GL + + +L++LV +
Sbjct: 312 NPLAIK-DVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWK 370
Query: 287 GREEMMRVSGCVGVFVKML-----KTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLD 341
EE+ + G V +K+ K A+ +EI + G +
Sbjct: 371 AVEELGELGG-VSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTIT 429
Query: 342 ICMGLLEDDNEKVRRNANNLIQTL 365
L + + +R AN ++ L
Sbjct: 430 ---KLSREGTSRAQRKANGILDRL 450
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 275 (101.9 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 90/312 (28%), Positives = 145/312 (46%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P DF+CPI+LE+M DPV++++G T+DR SI W+ SGH TCP T L SL+PN AL
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLK-HTSLVPNRAL 333
Query: 66 RSLISNFTRTP-LPKPQLEHANPNPQ--------TLISVXXXXXXXXXXXXXXXX-QLTK 115
++LI + R +P P T + V +L
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFELRA 393
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV-AEG 174
L+K D+ +R + E+GA+ ++ L +LQ A K ++ +G
Sbjct: 394 LAKSDTVARACIAEAGAIPKLVRYLATECP--SLQINAVTTILNLSILEQNKTRIMETDG 451
Query: 175 AVSRVVAALRFGSP-DCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIRE 233
A++ V+ LR G+ + +A AA + SLA V + +G ++ LV L + G
Sbjct: 452 ALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPT-SS 510
Query: 234 KKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVEVLSILVKCKEGREEMMR 293
K++A A+ L + EN R V G ++ DA E E +++ V+ R +M
Sbjct: 511 KRDALVAILNLVAERENVGRFVEAG---VMGAAGDAFQELPEEAVAV-VEAVVRRGGLMA 566
Query: 294 VSGCVGVFVKML 305
VS + +++L
Sbjct: 567 VSAAFSL-IRLL 577
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 252 (93.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 85/331 (25%), Positives = 144/331 (43%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHR-TCPITKLPLPDQPSLIPN 62
+ P F CPISLEIM DPVI+S+G T+DR SI++WL +G + +CP+TK + D L PN
Sbjct: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDA-DLTPN 69
Query: 63 HALRSLISNFT---------RTPLPKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQL 113
H LR LI ++ R P P+P + + LI +L
Sbjct: 70 HTLRRLIQSWCTLNASYGVERIPTPRPPI--CKSEIEKLIR---DSASSHENQVKCLKRL 124
Query: 114 TKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE 173
++ ++ ++R L +G + N + S+ +L ++A L+
Sbjct: 125 RQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNN 184
Query: 174 GAVSRVVAAL----RFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGK 229
+ +V +L + G + R A ++ ++ V ++ P +V +L +
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRI 244
Query: 230 LIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLA-DA-------GLERAVEVLSIL 281
+ K A L + + NR + V G + +++ L D G E A+ VL +L
Sbjct: 245 SQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLL 304
Query: 282 VKCKEGREEMMRVSGCVGVFVKMLKTGSSRA 312
+C EGR E + + V K + S A
Sbjct: 305 CQCAEGRAEFLNHGAAIAVVCKKILRVSQTA 335
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 192 (72.6 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 58/207 (28%), Positives = 100/207 (48%)
Query: 167 KVGLVAEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQ 226
KV +V G V ++ L+ G+ + + A + SLA+ + NK IG A+ L+ L+
Sbjct: 310 KVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLG-AVEPLLHALR 368
Query: 227 NGKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG--LERAVEVLSILVKC 284
+ + R +++AA ALY L+ P NR R+V GAVP L+ + +G R + VL L C
Sbjct: 369 SSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAAC 428
Query: 285 KEGREEMMRVSGCVGVFVKMLKT---GSSRAVQXXXXXXXXXXXXXQ-EICGDSRKEGVL 340
+G+ M+ V + V L+ G S A + G + + G
Sbjct: 429 PDGKGAMLD-GNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAE 487
Query: 341 DICMGLLEDDNEKVRRNANNLIQTLSG 367
++ M + E+ NE+V+ A+ ++ + G
Sbjct: 488 EVLMEVEENGNERVKEKASKILLAMRG 514
Score = 123 (48.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P +F CPI+ +MSDPV++SSG TF+R S+Q + G+ + PD ++IPN A+
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIP-DLLDGTRPDLSTVIPNLAM 90
Query: 66 RSLISNFTRTPLPKPQLEHANP 87
+S I ++ + +++H P
Sbjct: 91 KSTIFSWC----DRQKVDHPRP 108
Score = 57 (25.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 237 AATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVE-VLSILVKCK-EGREEMM-R 293
AA ++ L+ +N+ ++V G VP+L+ + +G A E V L E +M+
Sbjct: 296 AAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIG 355
Query: 294 VSGCVGVFVKMLKTGSS-RAVQ 314
V G V + L++ S RA Q
Sbjct: 356 VLGAVEPLLHALRSSESERARQ 377
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 250 (93.1 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 81/283 (28%), Positives = 133/283 (46%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALR 66
+D CPISLEIM+DPV++ +GHT+DR+SI +W SG+ TCPIT L L+ N ++R
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTST-ELVDNVSVR 348
Query: 67 SLISNFTRTP------LPKPQLEHANPNPQTLISVXXXXXXXXXXXXX-----------X 109
+I +T + + + H + P++L +
Sbjct: 349 QVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRA 408
Query: 110 XXQLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVG 169
++ +K S +R L ++GAV+ +L L S +QE A K
Sbjct: 409 VREIRVQTKTSSFNRSCLVKAGAVTPLLKLLS--SVDIRIQENAMAGILNLSKHVTGKSK 466
Query: 170 LVAEGAVSRVVAALRFGSP-DCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNG 228
+ EG + +V L G+ + R +A+ + L+ VE IG+ P AI L+++++
Sbjct: 467 IAGEG-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGD 525
Query: 229 KL-IREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG 270
K+ A A+ L +N RV++ GAVPIL+ L +G
Sbjct: 526 DYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSG 568
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 80/257 (31%), Positives = 129/257 (50%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+L L+K + +R + ESGA+ A++ L+ + D +T QE A K +
Sbjct: 206 KLRLLAKNRADNRVLIGESGAIQALIPLLRCN-DPWT-QEHAVTALLNLSLHDQNKAVIA 263
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
A GA+ +V L+ G+ + AA + SLA++E NK +IG AI LVSLL NG
Sbjct: 264 AGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACG-AIPPLVSLLLNGSC- 321
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAGL---ERAVEVLSILVKCKEG 287
R KK+A T LY L + +N++R V+ GAV P++ +A+ G E+A+ VLS L +G
Sbjct: 322 RGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDG 381
Query: 288 REEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLL 347
+E ++ G + V+ ++ GS + + G +EG + +GL
Sbjct: 382 KEAIVEEGG-IAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLS 440
Query: 348 EDDNEKVR--RNANNLI 362
+ + VR R A L+
Sbjct: 441 QSGSVSVRAKRKAERLL 457
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 181 (68.8 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 30/67 (44%), Positives = 49/67 (73%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P++ +CPISL++M DPVI++SG T++R I++W GH +CP T+ LP SL PN+ +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHL-SLTPNYCV 334
Query: 66 RSLISNF 72
+ LI+++
Sbjct: 335 KGLIASW 341
Score = 131 (51.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 48/201 (23%), Positives = 85/201 (42%)
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLK--IHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE 173
L K + +R + +G V A L L+ +H + QE L+
Sbjct: 451 LLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLT 510
Query: 174 GAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIRE 233
V ++ + + A + +L+ +E K IG A++ V+LL +
Sbjct: 511 SGVIPLLEKM-ISCSQSQGPATALYLNLSCLEKAKPVIGS-SQAVSFFVNLLLQDTKTQC 568
Query: 234 KKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG----LERAVEVLSILVKCKEGRE 289
K +A ALY L+++ N ++S + L LA G +E+++ VL L +EG+E
Sbjct: 569 KLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKE 628
Query: 290 EMMRVSGCVGVFVKMLKTGSS 310
EM+ G + +L TG +
Sbjct: 629 EMITTQGMISTLATVLDTGDT 649
Score = 45 (20.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 25/143 (17%), Positives = 54/143 (37%)
Query: 224 LLQNGKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVEVLSILVK 283
+++N +++ + E A L F E + + + G A+ + ++ V
Sbjct: 444 VVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETG---AMALFNLAVN 500
Query: 284 CKEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDIC 343
+E +M SG + + KM+ S+ + + G S + V
Sbjct: 501 NNRNKE-LMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSS--QAVSFFV 557
Query: 344 MGLLEDDNEKVRRNANNLIQTLS 366
LL+D + + +A + + LS
Sbjct: 558 NLLLQDTKTQCKLDALHALYNLS 580
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 207 (77.9 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 53/139 (38%), Positives = 74/139 (53%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
+ Q P F+CPISL++MSDPV +S+G T+DR SI W+ G+ TCP+T++ L D +LI
Sbjct: 10 LGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDF-TLI 68
Query: 61 PNHALRSLI--------SN-FTRTPLPKPQLEHANP-NPQTLISVXXXXXXXXXXXXXXX 110
PNH LR LI SN R P PK + A+P + ++L+S
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPK---QPADPISVRSLLSQASAITGTHVSVRSRA 125
Query: 111 XQLTKLS--KRDSASRRKL 127
+ +L RDS R L
Sbjct: 126 AAIRRLRGLARDSEKNRVL 144
Score = 86 (35.3 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 44/182 (24%), Positives = 77/182 (42%)
Query: 192 AIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREK-KEAATALYALTSFPEN 250
A+ ++T +++ K I ++ LL+N R K A++AL +
Sbjct: 219 ALIEMVLTGAKSMDL-KLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQT 277
Query: 251 RKRVVSCGAVPILM-RLA-D---AGLERAVEVLSILVKCKEGREEMMRVSGCVGVFVKML 305
R +S GA IL+ RLA D ER + + +L + EG + V + VK +
Sbjct: 278 RHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTI 337
Query: 306 KTGSSRAVQXXXXXXXXXXXXXQEICGD-SRKEGVLDICMGLLEDD-NEKVRRNANNLIQ 363
S RA + +E C D + G++ + L++ D E+ +R A L++
Sbjct: 338 LRVSDRATEYAAGALLALCTA-EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLK 396
Query: 364 TL 365
L
Sbjct: 397 LL 398
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 183 (69.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALR 66
DD +CPISLEIMSDPV+L SGHT+DR+SI +W SG+ TCP T L L+ N +++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTV-LVDNFSVK 338
Query: 67 SLISNFTR 74
+I ++++
Sbjct: 339 QVIQSYSK 346
Score = 121 (47.7 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 56/205 (27%), Positives = 97/205 (47%)
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE-- 173
L+K + R L E+G V +++ L+ SD +QE A K +V E
Sbjct: 401 LTKTSTFYRSCLVEAGVVESLMKILR--SDDPRIQENAMAGIMNLSKDIAGKTRIVGEDG 458
Query: 174 GAVSRVVAALRFGSP-DCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKL-I 231
G + +V L G+ + R AA + L+ + IG+ AI LV ++++
Sbjct: 459 GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGD 518
Query: 232 REKKEAATALYALT-SFPENRKRVVSCGAVPILMRLADAG-LERAV--EVLSILVKCKEG 287
K+ A A+ +L + P+N R+++ G VP+L+ L + + V + ++IL K E
Sbjct: 519 SAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEY 578
Query: 288 REEMMRV--SGCVGVFVKMLKTGSS 310
+ M+ V G + + VK+L GSS
Sbjct: 579 PDGMISVLRRGGLKLAVKIL--GSS 601
Score = 45 (20.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 338 GVLDICMGLLEDDNEKVRRNANNLIQTLS 366
GV++ M +L D+ +++ NA I LS
Sbjct: 416 GVVESLMKILRSDDPRIQENAMAGIMNLS 444
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 174 (66.3 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P++ +CPISL++M DPVI++SG T++R I++W GH TCP T L L PN+ +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQL-SHLCLTPNYCV 338
Query: 66 RSLISNF 72
++LIS++
Sbjct: 339 KALISSW 345
Score = 128 (50.1 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 60/259 (23%), Positives = 109/259 (42%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCL--KIHSDGFTLQEK-AXXXXXXXXXXXXXKV 168
Q+ L K D +R + E+G V A+L L ++ + + Q+ A K
Sbjct: 445 QIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKE 504
Query: 169 GLVAEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNG 228
++A G + + L +P I +L+ +E K IG A+ +V+LL
Sbjct: 505 LMLASGIIPLLEEMLC--NPHSHGSVTAIYLNLSCLEEAKPVIGS-SLAVPFMVNLLWTE 561
Query: 229 KLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG----LERAVEVLSILVKC 284
++ K +A +L+ L+++P N ++S V L L + E+++ VL LV
Sbjct: 562 TEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLN 621
Query: 285 KEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDS-RKEGVLDIC 343
+ G++EM+ V +L TG Q EIC + +EGV+
Sbjct: 622 EAGKDEMVSAPSLVSNLCTILDTGEPNE-QEQAVSLLLILCNHSEICSEMVLQEGVIPSL 680
Query: 344 MGLLEDDNEKVRRNANNLI 362
+ + + ++ R A L+
Sbjct: 681 VSISVNGTQRGRERAQKLL 699
Score = 48 (22.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 273 RAVEVLSILVKCKEGREEMMRVSGCVGVFVKML 305
R VE + +L+K E +M +GCV ++ L
Sbjct: 441 RVVEQIRVLLKDDEEARILMGENGCVEALLQFL 473
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 153 (58.9 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 54/196 (27%), Positives = 95/196 (48%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
+ ++++ D +SR L + +SA L L I S T+Q KV +V
Sbjct: 252 IRRITRIDESSRISLCTTRVISA-LKSL-IVSRYATVQVNVTAVLVNLSLEKSNKVKIVR 309
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIR 232
G V ++ L+ GS + + +A +I SLA+ + NK IG + L+ L++ G +
Sbjct: 310 SGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLG-GLEPLLHLIRVGTELT 368
Query: 233 EKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG--LERAVEVLSILVKCKEGREE 290
+ ++A ALY L+ NR ++V GAV +L+ + G + R + +L + C R
Sbjct: 369 -RHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMASCPVSRPA 427
Query: 291 MMRVSGCVGVFVKMLK 306
++ SG V V +L+
Sbjct: 428 LLD-SGGVECMVGVLR 442
Score = 146 (56.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 3 TQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPN 62
T+ P +F CPIS +M+DP+I+SSGH+++RA + +T T P PD ++IPN
Sbjct: 56 TEIPAEFLCPISGSLMADPIIVSSGHSYERACV-----IACKTLGFTPTPPPDFSTVIPN 110
Query: 63 HALRSLISNFTRT---PLPKP 80
AL+S I ++ P PKP
Sbjct: 111 LALKSAIHSWCERRCFPPPKP 131
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 185 (70.2 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 31/67 (46%), Positives = 49/67 (73%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P++ +CPISL++M DPVI++SG T++R I++W GH TCP T+ LP SL PN+ +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP-HISLTPNNCV 331
Query: 66 RSLISNF 72
+ LI+++
Sbjct: 332 KGLIASW 338
Score = 113 (44.8 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 55/255 (21%), Positives = 102/255 (40%)
Query: 116 LSKRDSASRRKLTESGAVSAVLNCL--KIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE 173
L K D +R + +G V A+L L + + Q+ L+
Sbjct: 451 LLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 174 GAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIRE 233
V R++ + S + A + +L+ ++ K+ IG A+ LV LLQ +
Sbjct: 511 SGVIRLLEKM-ISSAESHGSATALYLNLSCLDEAKSVIGS-SQAVPFLVQLLQKEIETQC 568
Query: 234 KKEAATALYALTSFPENRKRVVSCGAVPILMRL-ADAG----LERAVEVLSILVKCKEGR 288
K +A ALY L+++ N ++S + L L A G +E+++ VL L +EG+
Sbjct: 569 KLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGK 628
Query: 289 EEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDS-RKEGVLDICMGLL 347
+E + G + +L G + Q +E C +EGV+ + +
Sbjct: 629 DEAVSSQGMISSLATVLDMGDTTE-QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSIS 687
Query: 348 EDDNEKVRRNANNLI 362
+ + R + L+
Sbjct: 688 VNGTPRGREKSQKLL 702
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 235 (87.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 71/258 (27%), Positives = 125/258 (48%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
++ LSK +R K+ ++GA+ +++ I S LQE K +
Sbjct: 86 EIRLLSKNKPENRIKIAKAGAIKPLISL--ISSSDLQLQEYGVTAILNLSLCDENKESIA 143
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
+ GA+ +V AL+ G+P + AA + L+ +E NK IG AI LV+LL+ G
Sbjct: 144 SSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSG-AIPLLVNLLETGGF- 201
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAG---LERAVEVLSILVKCKEG 287
R KK+A+TALY+L S EN+ R V G + P++ +AD G ++++ V+S+L+ E
Sbjct: 202 RAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPES 261
Query: 288 REEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLL 347
+ ++ G V V V++++ G+ R + +EG + + L
Sbjct: 262 KPAIVEEGG-VPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALS 320
Query: 348 EDDNEKVRRNANNLIQTL 365
+ + ++ A LI+ L
Sbjct: 321 QAGTSRAKQKAEALIELL 338
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 40/153 (26%), Positives = 72/153 (47%)
Query: 218 INALVSLLQNGKLIREKKEAATALYALT-SFPENRKRVVSCGAV-PILMRLADAGL---E 272
IN LVS L + I E+K+AA + L+ + PENR ++ GA+ P++ ++ + L E
Sbjct: 64 INHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQE 123
Query: 273 RAVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICG 332
V + L C E +E + SG + V+ LK G+ A + +
Sbjct: 124 YGVTAILNLSLCDENKESIAS-SGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVA 182
Query: 333 DSRKEGVLDICMGLLEDDNEKVRRNANNLIQTL 365
R G + + + LLE + +++A+ + +L
Sbjct: 183 IGRS-GAIPLLVNLLETGGFRAKKDASTALYSL 214
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 195 (73.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P +F CPISL++M DPV+ S+G T+DR SI +W++ GH TCP + L D L+PN AL
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADH-RLVPNRAL 356
Query: 66 RSLISNF 72
RSLIS +
Sbjct: 357 RSLISQW 363
Score = 98 (39.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 44/171 (25%), Positives = 69/171 (40%)
Query: 194 AATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALTSFPENRKR 253
A T + +L++ E NK I + + +V +LQNG K+ AA L++L S N K+
Sbjct: 461 AVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSL-SVVHNFKK 519
Query: 254 VV--SCGAVPILMRLADAGLER----AVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKT 307
++ GAV L + G R AV L L E M+ S V ++ L+
Sbjct: 520 LIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLE-SCAVVALIQSLRN 578
Query: 308 GSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDDNEKVRRNA 358
+ + G S E V+ +GL+ K + NA
Sbjct: 579 DTVSEEAAGALALLMKQPSIVHLVGSS--ETVITSLVGLMRRGTPKGKENA 627
Score = 95 (38.5 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 44/153 (28%), Positives = 70/153 (45%)
Query: 167 KVGLVAEGAVSRV-VAALRFGSPDCRAIAATIITSLAVV-EVNKATIGDYPYAINALVSL 224
+ + A A +R+ V L GS + +A+AA I LA + N+A I D AI L L
Sbjct: 391 RAAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLG-AIPLLCRL 449
Query: 225 LQNGKLIREKKEAATALYALTSFPENRKRVVSC-GAVPILMRLADAGL-----ERAVEVL 278
L + + ++ A TAL L+ F N+ R++ G + +++ + G E A L
Sbjct: 450 LLSNDWMAQEN-AVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATL 508
Query: 279 SILVKCKEGREEMMRVSGCVGVFVKMLKTGSSR 311
L ++ +M G V ML G+SR
Sbjct: 509 FSLSVVHNFKKLIMNEPGAVEELASMLTKGTSR 541
Score = 90 (36.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 180 VAALRFGSPD-----CRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREK 234
V L++ SP+ +AA+ +S A +E NKAT LV +L++G K
Sbjct: 366 VYGLQYDSPESNEGMAECVAASC-SSRAAMEANKATA-------RILVRMLEDGSE-NVK 416
Query: 235 KEAATALYALTSF-PENRKRVVSCGAVPILMRLA---D-AGLERAVEVLSILVKCKEGRE 289
AA + L +NR + GA+P+L RL D E AV L L + +
Sbjct: 417 AVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKG 476
Query: 290 EMMRVSGCVGVFVKMLKTG 308
+M GC+ + V +L+ G
Sbjct: 477 RIMEQEGCLRLIVGVLQNG 495
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 236 (88.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 84/329 (25%), Positives = 140/329 (42%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F+CPIS E+M DPVI++SG T+DR +I++W +SG++TCP+T L IPNH +
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ-IPNHTI 92
Query: 66 RSLISNFT---------RTPLPK-PQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTK 115
R +I + R P P+ P H +S ++T+
Sbjct: 93 RRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT-KMTR 151
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDG----FTLQEKAXXXXXXXXXXXXXKVGLV 171
L K +R+ + E+GA + C S+ L+E + L
Sbjct: 152 LGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQSKLT 211
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
+ +R+V LR G + + ++ L V V+ T IN + K I
Sbjct: 212 TTSSFNRLVELLRNGDQNAAFLIKELL-ELNVTHVHALT------KINGVQEAFM--KSI 262
Query: 232 REKKEAATAL----YALTSFPENRKRVVSCGAVPILMR-LADAG---LERAVEVLSILVK 283
+L + + + E R + V I + L D+ E+A+ VL+++ +
Sbjct: 263 NRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNVICE 322
Query: 284 CKEGREEMMRVSGCVGVFVK-MLKTGSSR 311
KEGRE++ R + + VK +LK +
Sbjct: 323 TKEGREKVRRNKLVIPILVKKILKISEKK 351
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 232 (86.7 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 68/204 (33%), Positives = 110/204 (53%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
++ LSK +R KL ++GA+ +++ I S LQE K +V
Sbjct: 84 EIRLLSKNKPENRIKLAKAGAIKPLVSL--ISSSDLQLQEYGVTAVLNLSLCDENKEMIV 141
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
+ GAV +V ALR G+P + AA + L+ VE NK TIG AI LV+LL+NG
Sbjct: 142 SSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSG-AIPLLVNLLENGGF- 199
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAG---LERAVEVLSILVKCKEG 287
R KK+A+TALY+L S EN+ R V G + P++ + D ++++ V+++L+ E
Sbjct: 200 RAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPES 259
Query: 288 REEMMRVSGCVGVFVKMLKTGSSR 311
+ ++ G V V V++++ G+ R
Sbjct: 260 KPAVVEEGG-VPVLVEIVEAGTQR 282
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 51/196 (26%), Positives = 91/196 (46%)
Query: 123 SRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAA 182
++ + SGAV ++N L++ + T +E A K+ + GA+ +V
Sbjct: 136 NKEMIVSSGAVKPLVNALRLGTP--TTKENAACALLRLSQVEENKITIGRSGAIPLLVNL 193
Query: 183 LRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALY 242
L G + A+T + SL NK + + LV L+ + + K +A +
Sbjct: 194 LENGGFRAKKDASTALYSLCSTNENKTRAVESGI-MKPLVELMIDFESDMVDK-SAFVMN 251
Query: 243 ALTSFPENRKRVVSCGAVPILMRLADAGLERAVEV-LSILVK-CKEG--REEMMRVSGCV 298
L S PE++ VV G VP+L+ + +AG +R E+ +SIL++ C+E M+ G V
Sbjct: 252 LLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRTMVAREGAV 311
Query: 299 GVFVKMLKTGSSRAVQ 314
V + + +SR +
Sbjct: 312 PPLVALSQGSASRGAK 327
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 195 (73.7 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P DF CPISL++M+DPVI+S+G T+DR SI RW++ GH TCP T L D ++PN AL
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDS-RIVPNRAL 364
Query: 66 RSLI 69
++LI
Sbjct: 365 KNLI 368
Score = 92 (37.4 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 39/183 (21%), Positives = 74/183 (40%)
Query: 195 ATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALTSFPENRKRV 254
A+ + + A VE NKAT+ + L+ L +G + A + ENR +
Sbjct: 392 ASALPTKAAVEANKATV-------SILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYI 444
Query: 255 VSCGAVPILMRLADA----GLERAVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKTGSS 310
GA+P L RL + E +V + L ++ + +M C+ V +L +G +
Sbjct: 445 AEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLT 504
Query: 311 RAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMG----LLEDDNEKVRRNANNLIQTLS 366
Q E ++ ++D C+ LL++ + +++A + LS
Sbjct: 505 VEAQENAAATLFSLSAVHEY---KKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLS 561
Query: 367 GNP 369
+P
Sbjct: 562 THP 564
Score = 91 (37.1 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 36/142 (25%), Positives = 69/142 (48%)
Query: 171 VAE-GAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGK 229
+AE GA+ + L + + + T + +L++ E NK+ I + + ++VS+L +G
Sbjct: 444 IAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGL 503
Query: 230 LIREKKEAATALYALTSFPENRKRVV---SC-GAVPILMRLADA-GLERAVEVLSILVKC 284
+ ++ AA L++L++ E +KR+ C A+ +L++ G + AV L L
Sbjct: 504 TVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTH 563
Query: 285 KEGREEMMRVSGCVGVFVKMLK 306
+ M+ G V V LK
Sbjct: 564 PDNCSRMIEGGG-VSSLVGALK 584
Score = 80 (33.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 48/210 (22%), Positives = 88/210 (41%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTL--QEKAXXXXXXXXXXXXXKVGL 170
+ LS + R + E + ++++ L G T+ QE A K +
Sbjct: 472 MLNLSIYEKNKSRIMEEGDCLESIVSVLV---SGLTVEAQENAAATLFSLSAVHEYKKRI 528
Query: 171 -VAEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGK 229
+ + V + L+ G+P + A T + +L+ N + + + +++LV L+N
Sbjct: 529 AIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGG-GVSSLVGALKNEG 587
Query: 230 LIREKKEAATALYALTSFPENRKRV-VSCGAVPILMRLADAGLERAVE--VLSILVKCKE 286
+ +EAA AL L + + AV LM + G R E V ++L C+
Sbjct: 588 VA---EEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRS 644
Query: 287 G----REEMMRVSGCVGVFVKMLKTGSSRA 312
G E+++R G+ +L TG+ RA
Sbjct: 645 GGAAVAEKVLRAPAIAGLLQTLLFTGTKRA 674
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 229 (85.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 88/295 (29%), Positives = 127/295 (43%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRT-CPITKLPLPDQPSL 59
+ Q P F+CPISLE+M DPV + +G T+DRASI+ W+ G+ T CP+T+ PL D +L
Sbjct: 10 LGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDF-TL 68
Query: 60 IPNHALRSLI--------SN-FTRTPLPKPQLEHANPNP-QTLISVXXXXXXXXXXXXXX 109
IPNH LR LI SN R P PK + A+P + L+S
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPK---QPADPTSVRALLSQASAITGTHVSVRSR 125
Query: 110 XXQLTKLS--KRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXK 167
L +L RDS R L + + +L +KI T E +
Sbjct: 126 AAALRRLRGFARDSDKNRVLIAAHNATEIL--IKILFSETTSSELVSESLALLVMLPITE 183
Query: 168 ----VGLVAE-GAVSRVVAALRFGSPDCRAIAATII--TSLAVVEVN-KATIGDYPYAIN 219
V + ++ G V + L S + R AA +I S + K +I +
Sbjct: 184 PNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 220 ALVSLLQNGKLIREK-KEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLER 273
++ LL+N R K L+AL S R ++ GA IL+ A +R
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDR 298
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 158 (60.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 56/196 (28%), Positives = 92/196 (46%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
+ K+++ + +R L +S + N I S +Q A K+ +V
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNM--IVSRYSLVQTNALASLVNLSLDKKNKLTIVR 305
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIR 232
G V ++ L+ GS + + AA I SL++ + NK IG A+ L+ L+ + R
Sbjct: 306 LGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLG-ALQPLLHALRAAESDR 364
Query: 233 EKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG--LERAVEVLSILVKCKEGREE 290
+ ++A ALY LT NR ++V GAVP L + +G RA+ V+ L C EGR
Sbjct: 365 TRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSEGRSA 424
Query: 291 MMRVSGCVGVFVKMLK 306
M+ + V + V L+
Sbjct: 425 MLDANA-VAILVGKLR 439
Score = 125 (49.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKL-----PLPDQPS 58
Q P +F CPIS +MSDPV++SSG TF+R +Q D I KL LPD +
Sbjct: 32 QPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNF----IPKLNDDEESLPDFSN 87
Query: 59 LIPNHALRSLISNFTRTP-LPKPQ 81
+IPN ++S I + T + +PQ
Sbjct: 88 IIPNLNMKSTIDTWCDTVGVSRPQ 111
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 285 KEGREEMMRVSGCVGVFVKMLKTGSSRA 312
K+ + ++R+ G V + + +LK+GS A
Sbjct: 297 KKNKLTIVRL-GFVPILIDVLKSGSREA 323
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 188 (71.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHR-TCPITKLPLPDQPSLIPN 62
+ P F CPISL+IM DPVI+S+G T+DR SI++WL SG + +CP+TK + + L PN
Sbjct: 6 EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITET-DLTPN 64
Query: 63 HALRSLISNFT---------RTPLPKPQL 82
H LR LI ++ R P PKP +
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPI 93
Score = 70 (29.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 42/201 (20%), Positives = 77/201 (38%)
Query: 176 VSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKK 235
V + ++ G + RA AA ++ L V I ++ +L + + +
Sbjct: 215 VKTLTKIMQRGIYESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATR 274
Query: 236 EAATALYALTSFPENRKRVVSCGAVPILMRLA--DA------GLERAVEVLSILVKCKEG 287
A L + NR + V G + +++ L D E A+ VL +L +C EG
Sbjct: 275 SAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEG 334
Query: 288 REEMMRVSGCVGVFVK-MLKTG---SSRAVQXXXXXXXXXXXXXQEICGDSRKEGVL-DI 342
R E + + V K +L+ S RAV+ + + + GV+ +
Sbjct: 335 RAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCAT--PSLLQEMLQLGVVAKL 392
Query: 343 CMGLLEDDNEKVRRNANNLIQ 363
C+ L K + A L++
Sbjct: 393 CLVLQVSCGNKTKEKAKELLK 413
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 181 (68.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 3 TQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPN 62
T P FKCPISL++M PV LS+G T+DR SIQRWLD G+ TCP T L ++ +PN
Sbjct: 9 TTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNK-EFVPN 67
Query: 63 HALRSLISNFT 73
L LI +++
Sbjct: 68 LTLHRLIDHWS 78
Score = 77 (32.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDY-PYAINALVSLLQNGKL- 230
EG V+ ++ + S D I A + +A+ + + + L SLL +
Sbjct: 230 EGLVTEIIKLISSDS-DSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTS 288
Query: 231 IREKKEAATALYALTSFPENRKRVVS--CGAVPI--LMRLADAGLERAVEVL-SI--LVK 283
+ ++ L A++S E R + C + LM+++ A E AV VL S+ L K
Sbjct: 289 VSVTEKCLKLLEAISSCKEGRSEICDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFK 348
Query: 284 CKEGREEMMRVSGCVGVFVKMLKTGSSRAVQ 314
K+ ++ ++R++G + + +L++ S V+
Sbjct: 349 EKKAQDAVIRINGVTKILL-LLQSNCSLTVR 378
Score = 59 (25.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 272 ERAVEVLSILVKCKEGREEMMRVSGCVGVFV-KMLKTGSSRAVQXXXXXXXXXXXXXQEI 330
E+ +++L + CKEGR E+ CV V K++K ++ ++
Sbjct: 293 EKCLKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKK 351
Query: 331 CGDS--RKEGVLDICMGLLEDDNEKVRRNANNLIQTLSGN 368
D+ R GV I + L + + VR +L++ N
Sbjct: 352 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVN 391
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 178 (67.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F+CPISL++M PV L +G T+DRASIQRWLD G+ TCP T L ++ IPN L
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNK-DFIPNRTL 69
Query: 66 RSLI 69
+ LI
Sbjct: 70 QRLI 73
Score = 80 (33.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 46/206 (22%), Positives = 86/206 (41%)
Query: 176 VSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKK 235
+S +V + G+ + + A ++ +AV +K I + I L+ + + +
Sbjct: 198 LSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMKSISKDSDLSLIE 257
Query: 236 EAATALYALTSFPENRK----RVVSCGAVPILMRLADAGL-----ERAVEVLSILVKCKE 286
+ + L A++S P+ K R G V L+ + + L E+ +++L IL KE
Sbjct: 258 SSLSCLIAISS-PKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKE 316
Query: 287 GREEMMRVSG-CVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQE---ICGDSRKEGVLDI 342
GR E+ G C+ VK L S+ A + +E + + GV I
Sbjct: 317 GRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKI 376
Query: 343 CMGLLEDDNEKVRRNANNLIQTLSGN 368
+ L + + VRR +L++ N
Sbjct: 377 LLLLQSNCSPAVRRMLTDLLKVFKVN 402
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 71/253 (28%), Positives = 126/253 (49%)
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAE-G 174
L++ + +R + A+ ++++ L +S +Q A K L+AE G
Sbjct: 448 LARNSTDNRIVIARCEAIPSLVSLL--YSTDERIQADAVTCLLNLSINDNNK-SLIAESG 504
Query: 175 AVSRVVAALRFGS-PDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIRE 233
A+ ++ L+ G + +A +A + SL+V+E K IG+ AI LV LL +G L
Sbjct: 505 AIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAG-AIEPLVDLLGSGSL-SG 562
Query: 234 KKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG---LERAVEVLSILVKCKEGREE 290
KK+AATAL+ L+ EN+ +V+ GAV L+ L D +E+AV VL+ L +EG+
Sbjct: 563 KKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIA 622
Query: 291 MMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDD 350
+ G + V V++++ GS+R + + C + +EGV+ + L +
Sbjct: 623 IGEEGG-IPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSG 681
Query: 351 NEKVRRNANNLIQ 363
+ + A NL++
Sbjct: 682 TARGKEKAQNLLK 694
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 89/324 (27%), Positives = 144/324 (44%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P DF+C +SLE+M+DPVI++SG TF+R IQ+W+D G CP T+ L +L PN +
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQAL-SHTTLTPNFIV 299
Query: 66 RSLISNFTRT----PLPKP-QLEHAN-PNPQTLISVXXXXXXXXXXXXXXXXQLTKLSKR 119
R+ ++++ T P P P +L H++ P P + SV +L ++ R
Sbjct: 300 RAFLASWCETNNVYP-PDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSR 358
Query: 120 DSASRRKL-------TESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
SAS + T+ +A L + + E+ + G +
Sbjct: 359 -SASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSS 417
Query: 173 --EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKL 230
E V +++ L+ S D + A I LA + + AI +LVSLL +
Sbjct: 418 SIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDE 477
Query: 231 IREKKEAATALYALTSFPENRKRVVSCGA-VPILMRLADAGLERA----VEVLSILVKCK 285
R + +A T L L+ N+ + GA VP++ L LE A L L +
Sbjct: 478 -RIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIE 536
Query: 286 EGREEMMRVSGCVGVFVKMLKTGS 309
E + E+ +G + V +L +GS
Sbjct: 537 EYKTEIGE-AGAIEPLVDLLGSGS 559
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 132 (51.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 38/144 (26%), Positives = 75/144 (52%)
Query: 170 LVAEGA--VSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQN 227
++AE + + +L+ G+ + R AA ++SL+ ++ NK IG+ A+ AL+ L++
Sbjct: 246 VIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSE-AVKALIDLIEE 304
Query: 228 GKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAG--LERAVEVLSILVKCK 285
G L+ K EA + ++ L EN+ +VVS G + + AG ++ + +L+++
Sbjct: 305 GDLLATK-EATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALISTHN 363
Query: 286 EGREEMMRVSGCVGVFVKMLKTGS 309
EEM ++ +F + K S
Sbjct: 364 RAVEEMDKLGFIYDLFSILRKPSS 387
Score = 129 (50.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNH 63
+ P +F C +S IM +PVI++SG T+++ I WL RTCP TK L + IPNH
Sbjct: 71 EVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHR-LWIPNH 128
Query: 64 ALRSLISNF 72
+ LI+ +
Sbjct: 129 LISDLITQW 137
Score = 75 (31.5 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 196 TIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALTSFPENRKRVV 255
T + +L+++E NK I + I L L+ G ++ AA L +L++ N+ +
Sbjct: 232 TALFNLSILESNKTVIAENCLVIPLLTKSLKQGT-DETRRNAAATLSSLSAIDSNKIIIG 290
Query: 256 SCGAVPILMRLADAG-LERAVEVLSILVK-C--KEGREEMMRVSGCVGVFVKMLKTGSS 310
+ AV L+ L + G L E S + C E + +++ +G + K +K GS+
Sbjct: 291 NSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVS-AGLIHAATKKIKAGSN 348
Score = 40 (19.1 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 299 GVFVKMLKTGSSRAVQ 314
G F K+ K GS RA +
Sbjct: 422 GTFTKLAKQGSVRAAR 437
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 85/309 (27%), Positives = 129/309 (41%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPISLE M DPV L +G T++R +I +W + GH TCP T L D ++ PN L
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDD-TVTPNKTL 123
Query: 66 RSLISNF--TRTPLPKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKLSKRDSAS 123
LI + + L K + E ++ +L ++ +
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALS--ELKQIVIAHLMA 181
Query: 124 RRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAAL 183
R+ + E G VS + + L + + + K GL+ VS +V L
Sbjct: 182 RKTVVEEGGVSVISSLLGPFTS-HAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDML 240
Query: 184 RFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYA 243
GS + + A +I L VE K + + + LV L++ K R + + AL
Sbjct: 241 NDGSNETKINCARLIRGL--VE-EKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRL 297
Query: 244 LTSFPEN---RKRVVSCGAVP----ILMRLADAGLERAVEVLSILVKCKEGREEMMRVSG 296
L + R +VS GAVP IL L LE A+ VL L EGR + +
Sbjct: 298 LKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSAN 357
Query: 297 CVGVFVKML 305
+ V++L
Sbjct: 358 TIPYTVRVL 366
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 207 (77.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 83/296 (28%), Positives = 127/296 (42%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLP--DQPSLIPNH 63
P +F+CPIS+++M DPVI+S+G T+DR SI+ W++SG++TCP+T L DQ IPNH
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQ---IPNH 88
Query: 64 ALRSLISNFT---RTPL----PKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKL 116
+R +I + +PL P P++ P IS + K+
Sbjct: 89 TIRKMIQGWCVEKGSPLIQRIPTPRVP-LMPCEVYEISRKLSSATRRGDYEKCGVIIEKI 147
Query: 117 SKR--DSASRRKLTESGAVSAVL-NCL-KIHSDG---FTLQEKAXXXXXXXXXXXXXKVG 169
K +S RK +V VL +C K D F L E +
Sbjct: 148 KKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNE-ILSLLTWMFPIGLEGIS 206
Query: 170 LVAEGAVSRVVAALRFGSPDC-RAIAATIITS-LAVVEVNKATIGDYPYAINALVSLLQN 227
+A R VA L + D R AA I+ L++ E + ALV L+++
Sbjct: 207 KLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIRD 266
Query: 228 GKLIREKKEAATALYALT-SFPENRKRVVSCGAVPILMRL-ADAGLERAVEVLSIL 281
K + A+Y + PE + G V I + + DA + L++L
Sbjct: 267 SVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVL 322
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 90/366 (24%), Positives = 159/366 (43%)
Query: 16 EIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALRSLISNFTRT 75
EI+ PV +S D S+ + S RT + LP + NH+ R + S+F+ +
Sbjct: 116 EILP-PVAENSNSNSDYDSVMGAIRSRSRTSLSSTTSLPLHQTRPINHSTR-IQSSFSTS 173
Query: 76 PLPK-PQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKLSKRDSASRRKLTESGAVS 134
P + +P + + + QL K ++ + +R L +S
Sbjct: 174 DYSSFPPM---SPEEEEIYN--KLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILS 228
Query: 135 AVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAALRFGSPDCRAIA 194
+L L I S +Q A K+ +V G V ++ L+ GS + +
Sbjct: 229 -LLRSL-IVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHV 286
Query: 195 ATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALTSFPENRKRV 254
+ SLAV E NK IG A+ L+ L++ + R +++AA ALY L+ P NR R+
Sbjct: 287 IGALFSLAVEEENKMVIGVLG-AVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRL 345
Query: 255 VSCGAVPILMRLADAGLERAVEVLSILVK---CKEGREEMMRVSGCVGVFV-KMLKTGSS 310
V GAVP+++ + +G E A +L +L C EG+ M+ V + V K+ ++G +
Sbjct: 346 VKAGAVPMMLSMIRSG-ESASRILLLLCNLAACSEGKGAMLD-GNAVSILVGKLRESGGA 403
Query: 311 R----AVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMGLLEDDNE--KVRRNANNLIQT 364
A + G + + G +I ++E ++ +++ A+ ++QT
Sbjct: 404 ESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQT 463
Query: 365 LSGNPS 370
L G S
Sbjct: 464 LRGGGS 469
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQ--RWLDSGHRTCPITKLPLPDQPSLIPNH 63
P +F CPI+ +MSDPV+++SG TF+R S+Q R L + T+ PD ++IPN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQ---PDLSTVIPNL 67
Query: 64 ALRSLISNFTRTPLPKPQLEHANP 87
A++S I ++ + ++EH P
Sbjct: 68 AMKSTILSWC----DRNKMEHPRP 87
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 196 (74.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 74/291 (25%), Positives = 124/291 (42%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNH 63
+ P F CPISLE M DPV L +G T++R++I +W + GH TCP T L D + PN
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDD-LVTPNK 117
Query: 64 ALRSLISNF--TRTPLPKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKLSKRDS 121
L LI + + L K + E ++ +L ++ +
Sbjct: 118 TLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALS--ELKQVVMAHA 175
Query: 122 ASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVA 181
+++ + + G V + + L + + +A K GL+ VS +V
Sbjct: 176 IAKKTVVDEGGVFVISSLLSPFTS-HAVGSEAIAILVNLELDSDSKAGLMQPARVSLMVD 234
Query: 182 ALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATAL 241
L GS + + A +I L + +A + + L+ L+++ + A T L
Sbjct: 235 MLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTLL 294
Query: 242 YALTSFPENRKRVVSCGAVPILMRLA---DAG-LERAVEVLSILVKCKEGR 288
+++ + R +V GAVP L+ + D LE A+ VL L EGR
Sbjct: 295 KSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGR 345
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 178 (67.7 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P FKCPISL++M PV L +G T+DRASIQRWLD G+ TCP T + L +PN L
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPAT-MQLLKTKDFVPNLTL 71
Query: 66 RSLIS 70
+ LI+
Sbjct: 72 QRLIN 76
Score = 56 (24.8 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 25/105 (23%), Positives = 46/105 (43%)
Query: 272 ERAVEVLSILVKCKEGREEMMRVSG--CV-GVFVKMLKTGSSRAVQXXXXXXXXXXXXXQ 328
E+++++L L +EGR E+ CV GV K+LK ++ +
Sbjct: 296 EKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFRE 355
Query: 329 EICGDS---RKEGVLDICMGLLEDDNEKVRRNANNLIQTLSGNPS 370
+ + R GV + + + + + VR+ A +LI+ L N S
Sbjct: 356 DKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSS 400
Score = 37 (18.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 262 ILMRLADAGLERAVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKT 307
IL+ + LE +E + +L + + ++ GV +M+K+
Sbjct: 194 ILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKS 239
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 173 (66.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P+ FKC +S +M DPVI+SSG+TF+R IQ+W D G+ +CPI+K L D +L PN L
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDF-TLKPNVEL 278
Query: 66 RSLISNF 72
+S IS +
Sbjct: 279 KSQISEW 285
Score = 67 (28.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 126 KLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAALRF 185
K+T SG++S++L + S LQE+A + +V+ + ++ + L+
Sbjct: 498 KITSSGSLSSLLKI--VESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQ- 554
Query: 186 GSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALT 245
C+ + I+ +L E + I + P + ++ LL++ + E++ A + L L
Sbjct: 555 QKVFCKH-SIIILKNLCSTEKGRGCITETPDCLASIAELLESN-VPEEQENAISILLQLC 612
Query: 246 SFPENRKRVVSCGAVPI---LMRLADAGLER----AVEVLSILVKCKEGREEMMRVS 295
+V A I L+ +++ G E A E+L LV+ +EE VS
Sbjct: 613 VQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVS 669
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALR 66
+DFKCPIS+EIM DP + + G T++ ++WL SG RT P T PL + +L+PNH LR
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENH-NLVPNHTLR 293
Query: 67 SLISNF 72
+I ++
Sbjct: 294 IIIKDW 299
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 170 (64.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 74/291 (25%), Positives = 129/291 (44%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNH 63
+ P +F C +S +IM +P++++SG TF+++ I WL RTCP TK L + +IPNH
Sbjct: 64 EVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHR-FMIPNH 121
Query: 64 ALRS------LISNFTRTPLPKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKLS 117
+ LI NF R ++ + ++L+ +L +
Sbjct: 122 LINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQ-RISSPSSVEDQTEAAKELALKA 180
Query: 118 KRDSASR----RKLTESGAVSAVLNCLKIHSDGFT-LQEKAXXXXXXXXXXXXXKVGLVA 172
KR S+ K+ +S ++ +L L I D E K LVA
Sbjct: 181 KRFSSVCVYFVAKIPDS--ITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKT-LVA 237
Query: 173 EGAVSRVVAA--LRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKL 230
E + + A ++ G+ R +A + SL+ + NK IG+ + AL+ +++ G
Sbjct: 238 ENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSE-VLKALIHVIEEGDS 296
Query: 231 IREKKEAATALYALTSFPENRKRVVSCGAVPILMRLADAGLERAVEVLSIL 281
+ EA +AL L E ++ VS G + ++ AG ++ +LS+L
Sbjct: 297 LATS-EAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSM-LLSLL 345
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 170 (64.9 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNH 63
Q P F CPIS E+M +P + + G T++ S++ WLD+GH T P+T L L +L+PNH
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHN-NLVPNH 554
Query: 64 ALRSLISNF 72
ALRS I +
Sbjct: 555 ALRSAIQEW 563
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
PD+F CPI+ E+M DPVI + G+++++ +++ W+ + R+ P+T LPLP L PN L
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLV-LTPNRTL 463
Query: 66 RSLISNFTRT 75
+ IS + T
Sbjct: 464 KMAISRWLET 473
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 162 (62.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPIS+EIM DP + S G T++ +I+ W D G P+T L LP+ +L+PN L
Sbjct: 436 PAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNL-NLVPNRVL 494
Query: 66 RSLISNFTRTPLPKP 80
RS I + + P P
Sbjct: 495 RSFIHGYLQQQQPNP 509
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 161 (61.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
+++ PD+F CPI+ E+M DPVI S G+++++ +++ W+ RT P+T L LP L
Sbjct: 400 LSSGIPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMV-LT 458
Query: 61 PNHALRSLISNFTRT 75
PN L+ IS + T
Sbjct: 459 PNRTLKMAISRWLET 473
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 159 (61.0 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI-PNHA 64
PD+F CPI+ EIM DPVI + G++++R +I+ W+ + +RT P+T LPL Q +L+ PN
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPL--QTTLLTPNRT 475
Query: 65 LRSLI 69
L+ I
Sbjct: 476 LKMAI 480
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 71/280 (25%), Positives = 126/280 (45%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+L +SK+D SR + ++GA+ + L +S + QE A + +
Sbjct: 30 ELRLISKQDPDSRLIIADAGAIPYLAETL--YSSSHSSQENAAATLLNLSITSREPL-MS 86
Query: 172 AEGAVSRVVAALRFG----SPDC-RAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQ 226
+ G + + ALR SP ++ AATI + L E + IG I +L+ +++
Sbjct: 87 SRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPIIGSKRDIIFSLIHIIR 146
Query: 227 N-GKLIREKKEAATALYALTSFPENRKRVVSCGAVPILMRLA--DA--GL-ERAVEVLSI 280
R K++ AL+A+ +P NR ++S GA+P L L D+ G+ E A V++
Sbjct: 147 YPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLIVKDSRCGIVEDATAVMAQ 206
Query: 281 LVKCKEGREEMMRVSGCVGVFVKMLK--TGSSRAVQXXXXXXXXX------XXXXQEICG 332
+ C++ + M RVSG V +L TGSS ++ E+
Sbjct: 207 VAGCEDSEDGMRRVSGA-NVLADLLDPCTGSSLRIKENSVGALLNLARCGGAAARSEVAA 265
Query: 333 ---DSRKEGVLDICMGLLEDDNEKVRRNANNLIQ-TLSGN 368
EG ++ + + E+ + K R+ A +L++ +SGN
Sbjct: 266 AVASGADEGAMEGIVYVAENGSLKGRKKAVDLLKLVVSGN 305
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
+++ PD+F CPI+ E+M DPVI S G++++R +++ W+ RT P+T L LP L
Sbjct: 398 LSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLV-LT 456
Query: 61 PNHALRSLISNFTRT 75
PN L+ I+ + T
Sbjct: 457 PNRTLKMAINRWLET 471
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
+++ PD+F CPI+ E+M DPVI S G++++R +++ W+ RT P+T L LP L
Sbjct: 400 LSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLV-LT 458
Query: 61 PNHALRSLISNFTRT 75
PN L+ I+ + T
Sbjct: 459 PNRTLKMAINRWLET 473
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
+++ PD+F CPI+ E+M DPVI S G+++++ +++ W+ RT P+T L LP L
Sbjct: 400 LSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAV-LT 458
Query: 61 PNHALRSLISNFTRT 75
PN L+ I+ + T
Sbjct: 459 PNRTLKMAINRWLET 473
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPI+ ++M +P + S G+T+++ +I+ WL H++ P+T LP P SL+PNH+L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSD-SLLPNHSL 783
Query: 66 RSLISNFTRTPLPK 79
S I + R+ L K
Sbjct: 784 LSAIKEW-RSQLIK 796
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 30/67 (44%), Positives = 39/67 (58%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPISLE+M DP + + G T++ +I WL GH T P+T L L+PN AL
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKL-HHTKLVPNLAL 384
Query: 66 RSLISNF 72
RS I +
Sbjct: 385 RSAIQEW 391
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 76/323 (23%), Positives = 132/323 (40%)
Query: 2 ATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPD---QPS 58
+ + P +FKC +S IM DPVI+ SG T+++ I WL+ TCP K L P+
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD-LTCPTAKQVLYRVCLTPN 129
Query: 59 LIPNHAL-RSLISNFTRTPLPKPQ-LEHANP----NPQTLISVXXXXXXXXXXXXXXXXQ 112
+ N + R ++N P PKP +++ ++L+ +
Sbjct: 130 HLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAKE 189
Query: 113 LTKLSKRDSASR----RKLTESGAVSAVLNCLKIHSDGFT----LQEKAXXXXXXXXXXX 164
L +++ R ++L +S ++ +L L + D LQE
Sbjct: 190 LALQTEKFVNVRDFFIKELPDS--ITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTFE 247
Query: 165 XXKVGLVAEGAVSRVVA-ALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVS 223
K L V ++A +++ GS R A + SL+ ++ NK IG+ A+ AL+
Sbjct: 248 KNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGN-SVALKALID 306
Query: 224 LLQNGKLIREKKEAATALYALTSFP-ENRKRVVSCGAVPILMRLADAGLERAVEVLSILV 282
L+ + +A A+ L EN K+ +S G P ++ A E L+ L
Sbjct: 307 LIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKAR-RNLFESLAALA 365
Query: 283 KCKEGREEMMRVSGCVGVFVKML 305
+ V+ +GV +L
Sbjct: 366 LISPHERVIQEVAN-LGVIYDLL 387
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 155 (59.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P + CPI E+M DP+I + G T++ +I+ WL +GH T P+T L + D +LIPNHAL
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDC-NLIPNHAL 794
Query: 66 RSLISNF 72
I ++
Sbjct: 795 HLAIQDW 801
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPI E+M DP + + G T++ +I+ WLDS H T P+T + L SLI NHAL
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKL-SHTSLIANHAL 822
Query: 66 RSLISNF 72
RS I +
Sbjct: 823 RSAIQEW 829
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 3 TQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPN 62
+Q P F CP+ ++M +P I + G+T+DR +I+ W+++ HRT P+T PL + +L+PN
Sbjct: 747 SQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN-HRTSPVTNSPLQNV-NLLPN 804
Query: 63 HALRSLI 69
H L + I
Sbjct: 805 HTLYAAI 811
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPI+ +IM DP + + G T++ +I RW + GH T P+ LP SL+PN AL
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLP-HTSLVPNLAL 412
Query: 66 RSLISNF 72
RS I +
Sbjct: 413 RSAIQEW 419
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 71/309 (22%), Positives = 131/309 (42%)
Query: 9 FKCPISLEIMSDPVILSSGHTFDRASIQRWL----DSGHR-TCPITKLPLPDQPSLIPNH 63
F CP++ E+M DPV L +G TF+R +I++W DSG +CP+T L + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTST-DVSASI 85
Query: 64 ALRSLISNFTRTPLPKPQLEHANPNPQTLISVXXXXXXXXXXXXXXXXQLTKLSKRDSAS 123
ALR+ I + R+ +L+ A Q+L + ++ + ++
Sbjct: 86 ALRNTIEEW-RSRNDAAKLDIAR---QSLF-----LGNAETDILQALMHVRQICRTIRSN 136
Query: 124 RRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAAL 183
R + S + +++ LK S ++ KA +VAEG R +
Sbjct: 137 RHGVRNSQLIHMIIDMLK--STSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKF 194
Query: 184 RFGSPDC-RAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQ-NGKLIREKKEAATAL 241
P R A +++ L+ E IG A+ LV L N + + ++A L
Sbjct: 195 LSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTL 254
Query: 242 YALTSFPENRKRVVSCGAV-PILMRLADAGLERAVEVLSILVKCKEGREEMMRVSGCVGV 300
+ E +++ S G + P+L +L + E + + S L + + + V+ VG
Sbjct: 255 ENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGS 314
Query: 301 -FVKMLKTG 308
V ++++G
Sbjct: 315 SLVDLMRSG 323
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
++++ PD+F CPI+ E+M DP+I S G+++++ +++ W+ RT P+T L L L
Sbjct: 399 LSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVL-SSVILT 457
Query: 61 PNHALRSLISNF 72
PN L+ I +
Sbjct: 458 PNRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
++++ PD+F CPI+ E+M DP+I S G+++++ +++ W+ RT P+T L L L
Sbjct: 400 LSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVL-SSVILT 458
Query: 61 PNHALRSLISNF 72
PN L+ I +
Sbjct: 459 PNRTLKMAIDRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLI 60
++TQ P F CP+ ++M++P + + G+T+DR +I+ WL H T P+T PL + +L+
Sbjct: 762 VSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSK-NLL 819
Query: 61 PNHALRSLISNFTRT 75
PN+ L + I + T
Sbjct: 820 PNYTLYTAIMEWRST 834
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 110 (43.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 9 FKCPISLEIMSDPVILSSGHTFDRASIQRWL----DSGHR-TCPITKLPLPDQPSLIPNH 63
F CP++ ++M +PV L +G TF+R +I++W ++G +CPIT L L P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKEL-SITDLSPSI 87
Query: 64 ALRSLISNF 72
ALR+ I +
Sbjct: 88 ALRNTIEEW 96
Score = 78 (32.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/154 (21%), Positives = 69/154 (44%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
L +LSK ++ + + GA+ ++ S+ + EKA +
Sbjct: 212 LFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEENVRQMAI 271
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLIR 232
G + ++A L GSP+ + A + LA+ K + ++L+ L++ +
Sbjct: 272 NGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQT--VGSSLIDLMRTRDM-- 327
Query: 233 EKKEAAT-ALYALTSFPENRKRVVSCGAVPILMR 265
++EAA AL ++SF + K +++ G +P L++
Sbjct: 328 SQREAALGALNNISSFEGSAKLLINTGILPPLIK 361
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPIS +IM +P + + G+T++ +RWL+ G P+T L L ++ +LIPN L
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENR-NLIPNLVL 353
Query: 66 RSLISNF 72
RS I ++
Sbjct: 354 RSAIKDW 360
>UNIPROTKB|E1BKW8 [details] [associations]
symbol:TRIM65 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104271 EMBL:DAAA02049510 IPI:IPI00689576
Ensembl:ENSBTAT00000029353 OMA:YSLEPKT Uniprot:E1BKW8
Length = 513
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/89 (34%), Positives = 39/89 (43%)
Query: 2 ATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIP 61
A Q D C I LE+ +PV L GH F A I+ W + CP + P PD L
Sbjct: 3 AQQLEDKLTCSICLELYKEPVTLLCGHNFCGACIRDWWGLCEKVCPECREPFPDGAELRR 62
Query: 62 NHALRSLISNFTRTPLPKPQLEHANPNPQ 90
N AL ++ TP P P H P+
Sbjct: 63 NVALSGVVEELRATPGPGPDPSHGARCPR 91
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 114 (45.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 83 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 140
Query: 66 RSLISNF 72
+ +I F
Sbjct: 141 KEVIDAF 147
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 132 (51.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 53/210 (25%), Positives = 100/210 (47%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
L L+ +D ++ + E+GA+ ++N L+ +S TLQE A K + A
Sbjct: 129 LLNLAVKDEKNKVSIIEAGALEPIINFLQSNSP--TLQEYASASLLTLSASANNKPIIGA 186
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATI-GDYPYAINALVSLLQNGKLI 231
G V +V ++ GSP +A A +++L+ + N + I P ++ +++LL++ K
Sbjct: 187 NGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKP--LSPILNLLKSSKKS 244
Query: 232 REKKEAATALYA--LTSFPENRKRVVSC--GAVPILMRLADAGL---ERAVEVLSILVKC 284
+ E +L + S E R +VS G + ++ L + L E AV VL L +
Sbjct: 245 SKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQS 304
Query: 285 KEG--REEMMRVSGCVGVFVKMLKTGSSRA 312
RE ++R G + +++ G+S++
Sbjct: 305 DRSKYREPILR-EGVIPGLLELTVQGTSKS 333
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P + CPI EIM +P I + G T++R +I WL+ H P+T+ L D L PNH L
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKL-DHFKLTPNHTL 783
Query: 66 RSLISNF 72
RS I ++
Sbjct: 784 RSAIRDW 790
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P + CPI EIM DP I + G T++R +I+ W+ P+TK L L PNH L
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHS-DLTPNHTL 767
Query: 66 RSLI 69
RS I
Sbjct: 768 RSAI 771
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 43/155 (27%), Positives = 71/155 (45%)
Query: 113 LTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLVA 172
+T L+ RD ++ K+ SGA+ + K S +Q A + LV
Sbjct: 150 ITNLATRDD-NKHKIATSGALIPLTKLAK--SKHIRVQRNATGALLNMTHSEENRKELVN 206
Query: 173 EGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDY-PYAINALVSLLQNGKLI 231
GAV +V+ L PD + T ++++AV E N+ + P ++ LVSL+ +
Sbjct: 207 AGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSS- 265
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAVPILMRL 266
R K +A AL L S + +V G +P L++L
Sbjct: 266 RVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKL 300
>UNIPROTKB|F1NH39 [details] [associations]
symbol:F1NH39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101808
EMBL:AADN02045138 EMBL:AADN02058957 EMBL:AADN02058958
IPI:IPI00575345 Ensembl:ENSGALT00000019575 OMA:IVAECKE
Uniprot:F1NH39
Length = 406
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 2 ATQFPDDFKCPISLEIMSDPVILSS-GHTFDRASI-QRWLDSGHRTC-PITKLPLPDQPS 58
A D+ CP+ LE +DPV+++ GH F RA + Q W DS R C P + P+P Q
Sbjct: 6 ARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVP-QRL 64
Query: 59 LIPNHALRSLISNFTRTPLP 78
PN +L +++ + LP
Sbjct: 65 FRPNRSLGNIVHIVRQLGLP 84
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHAL 65
P F CPIS +IM P + G+TF+R+SI W D +TK P LIPN L
Sbjct: 773 PIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISFVTKRPFSTSAILIPNRNL 832
Query: 66 RSLISNFTRTPLP 78
++ I + + P
Sbjct: 833 KAQIQEWKNSHPP 845
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
DF C IS EI++DPVI SG T++R I+ L GH P+T++ L Q LIPN ++
Sbjct: 215 DFLCGKISFEILTDPVITPSGITYERKDIEEHLQRVGHFD-PVTRVKLT-QDQLIPNFSM 272
Query: 66 RSLISNF 72
+ ++ +F
Sbjct: 273 KEVVDSF 279
>ZFIN|ZDB-GENE-030131-6081 [details] [associations]
symbol:trim35-40 "tripartite motif containing
35-40" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-6081 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:KOG2177 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 EMBL:BC095707 IPI:IPI00613044 UniGene:Dr.80659
ProteinModelPortal:Q502G4 ArrayExpress:Q502G4 Uniprot:Q502G4
Length = 470
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 1 MATQFP---DDFKCPISLEIMSDPVILSSGHTFDRASIQR-WLDSGHRTCPITKLPLPDQ 56
MA++ P ++F CP+ ++ + PV+L+ GH+F R I+ W + R CP+ + +
Sbjct: 3 MASKRPFTEEEFSCPVCRDVFTHPVVLTCGHSFCRGCIEEFWNFNKTRRCPVCRQTTERE 62
Query: 57 PSLIPNHALRSLISNF 72
PSL N LR+L +F
Sbjct: 63 PSL--NFTLRNLCQSF 76
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 222 VSLLQNGKLIREK-KEAATALYALTSFPENRKRVVSCGAVPILMRLAD 268
+ L + + I EK ++ + + +L+S N + V+ CG + I+ R +
Sbjct: 197 LELEEKDQRIEEKVQQMQSDIVSLSSKIVNFRTVLECGDIDIVNRFKE 244
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 3 TQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPN 62
T+ PD C I+LEI DPVI SG T++RA+I L + PIT+ + D +L+PN
Sbjct: 198 TEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKI-DPANLVPN 256
Query: 63 HALRSLISNF 72
A++ ++ +
Sbjct: 257 LAIKEAVAAY 266
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 13 ISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHALRSLISN 71
I+LE+M +PVI+ SG T+DR I + L GH P+T+ PL + +IPN+AL+ +I
Sbjct: 193 ITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD-PVTRKPLTEN-EIIPNYALKEVIEK 250
Query: 72 F 72
F
Sbjct: 251 F 251
>ASPGD|ASPL0000001660 [details] [associations]
symbol:AN5906 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00504
EMBL:BN001301 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000163725
OMA:QENELHS EnsemblFungi:CADANIAT00007127 Uniprot:C8UZU5
Length = 293
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 6 PDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLD-SGHRTCPITKLPLPDQPSLIPNHA 64
PD PI+ EIM DPVI+ SG +FDR I ++++ SG PIT+ P+ L PN+A
Sbjct: 219 PDYLVDPITFEIMHDPVIVPSGTSFDRIGILKYVEQSG--VDPITRTPMTVN-DLRPNYA 275
Query: 65 LRSLISNF 72
L++ +F
Sbjct: 276 LKAACEDF 283
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 50/204 (24%), Positives = 90/204 (44%)
Query: 116 LSKRDSASRRKLTESGAVSAVLNCLKIHSDGF-TLQEKAXXXXXXXXXXXXXKVGLVAEG 174
L+K D +R L GA+ +++ + S L K +V G
Sbjct: 136 LAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAIVKAG 195
Query: 175 AVSRVVAALRFGSPDCRAIAATIITS---LAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
V +++ + P +AIA I+ + L+ ++ NK IG AI LV L+N +
Sbjct: 196 VVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSG-AIIFLVKTLKNFEET 254
Query: 232 ---REKKEAATALYALTSFPENRKRVVSCGAVPILMR-LADAGL-ERAVEVLSILVKCKE 286
+ +++A ALY L+ + +N ++ +P L+ L D + ER + +L+ +V E
Sbjct: 255 SSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVSVPE 314
Query: 287 GREEMMRVSGCVGVFVKMLKTGSS 310
GR+ + V + V +L S
Sbjct: 315 GRKAIGEVVEAFPILVDVLNWNDS 338
>DICTYBASE|DDB_G0283193 [details] [associations]
symbol:DDB_G0283193 species:44689 "Dictyostelium
discoideum" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 Pfam:PF04564 dictyBase:DDB_G0283193
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AAFI02000051 RefSeq:XP_639213.1 ProteinModelPortal:Q54RD2
EnsemblProtists:DDB0185407 GeneID:8623986 KEGG:ddi:DDB_G0283193
eggNOG:NOG272577 InParanoid:Q54RD2 OMA:TECDLEF Uniprot:Q54RD2
Length = 356
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 12 PISLEIMSDPVILS-SGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALRSLIS 70
PI++EIMSDPVI GH+F SI WL TCPI + + L PN++LR +I
Sbjct: 9 PITMEIMSDPVISKLCGHSFSNDSIIVWLQK-KETCPICNIKITTN-DLTPNYSLRDIIK 66
Query: 71 N 71
+
Sbjct: 67 H 67
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASI-----QRWLDSGHRTCPITKLPLPDQPSLIP 61
++ CPI LE++++P+ L GH+F +A I + L G R+CP+ +LP + +L P
Sbjct: 11 EEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE-NLRP 69
Query: 62 NHALRSLISNFTRTPLPKPQLEHAN 86
N L S++ L +P+ E N
Sbjct: 70 NRHLASIVERLREVML-RPE-ERQN 92
>UNIPROTKB|Q5D7I0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9521 "Saimiri sciureus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843517
ProteinModelPortal:Q5D7I0 SMR:Q5D7I0 Uniprot:Q5D7I0
Length = 494
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASI-----QRWLDSGHRTCPITKLPLPDQPSLIP 61
++ CPI LE++++P+ L GH+F +A I + L G R+CP+ +LP + +L P
Sbjct: 11 EEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE-NLRP 69
Query: 62 NHALRSLISNFTRTPLPKPQLEHAN 86
N L S++ L +P+ E N
Sbjct: 70 NRHLASIVERLREVML-RPE-ERQN 92
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 157 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 214
Query: 66 RSLISNF 72
+ +I F
Sbjct: 215 KEVIDAF 221
>DICTYBASE|DDB_G0270014 [details] [associations]
symbol:DDB_G0270014 species:44689 "Dictyostelium
discoideum" [GO:2001070 "starch binding" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002044 InterPro:IPR013784
Pfam:PF00686 PROSITE:PS50089 PROSITE:PS51166 SMART:SM00184
SMART:SM01065 dictyBase:DDB_G0270014 Prosite:PS00518
EMBL:AAFI02000005 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49452 GO:GO:2001070 eggNOG:NOG254243
RefSeq:XP_646470.1 ProteinModelPortal:Q55CL1
EnsemblProtists:DDB0190739 GeneID:8617431 KEGG:ddi:DDB_G0270014
InParanoid:Q55CL1 OMA:EYKYCIS Uniprot:Q55CL1
Length = 206
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 9 FKCPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRTCPITKLPLPDQPSLIPNHALRSL 68
F CPI ++ DPV+ GHTF + +WL S R CP +LP+ D+ LI N +
Sbjct: 16 FICPIGGGVIEDPVVTPCGHTFCNPCLIKWLQS-RRQCPTDRLPVTDK-QLIQNWLVYYY 73
Query: 69 ISNFT 73
S T
Sbjct: 74 TSELT 78
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 142 IHSDGFTLQEKAXXXXXXXXXXXXXKVGLVAEGAVSRVVAALRFGSPDCRAIAATIITSL 201
+ S +Q A KV +VA G ++ ++ + + + + A IT+L
Sbjct: 115 LQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNL 174
Query: 202 AVVEVNKATIGDYPYAINALVSLLQNGKLIREKKEAATALYALTSFPENRKRVVSCGAVP 261
A E NKA I A+ L+ L ++ K +R ++ A AL +T +NR+++V+ GA+P
Sbjct: 175 ATHEDNKAKIARSG-ALGPLIRLAKS-KDMRVQRNATGALLNMTHSDDNRQQLVNAGAIP 232
Query: 262 ILMRL 266
+L++L
Sbjct: 233 VLVQL 237
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 177 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QDQLIPNLAM 234
Query: 66 RSLISNF 72
+ +I F
Sbjct: 235 KEVIDAF 241
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRA---SIQRWLDSGHRTCPITKLPLPDQPSLI 60
+ D +CPI LE+ +P++L GH++ + S+ R LDS R CP+ + + D S
Sbjct: 9 ELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELR-CPVCQQEV-DSSSSP 66
Query: 61 PNHALRSLIS--NFTRTPLPKPQLEHANP 87
PN +L +I F P PK H NP
Sbjct: 67 PNVSLARVIEALQFPGDPEPKVCEHHRNP 95
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00042
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 213 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QDQLIPNLAM 270
Query: 66 RSLISNF 72
+ +I F
Sbjct: 271 KEVIDAF 277
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 229 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 286
Query: 66 RSLISNF 72
+ +I F
Sbjct: 287 KEVIDAF 293
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 229 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 286
Query: 66 RSLISNF 72
+ +I F
Sbjct: 287 KEVIDAF 293
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 229 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 286
Query: 66 RSLISNF 72
+ +I F
Sbjct: 287 KEVIDAF 293
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 230 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 287
Query: 66 RSLISNF 72
+ +I F
Sbjct: 288 KEVIDAF 294
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 230 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 287
Query: 66 RSLISNF 72
+ +I F
Sbjct: 288 KEVIDAF 294
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 94 (38.1 bits), Expect = 0.00049, P = 0.00049
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 1 MATQFP-----DDFKCPISLEIMSDPVILSSGHTFDRASIQ--RWLDSGHRTCPITKLPL 53
MAT P ++ C I L+ + DPV + GH F R+ R + CP+ K P
Sbjct: 1 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF 60
Query: 54 PDQPSLIPNHALRSLISNFTRTPLPK 79
+ ++ P L SL+ N R + K
Sbjct: 61 KKE-NIRPVWQLASLVENIERLKVDK 85
>UNIPROTKB|Q865W2 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 EMBL:AY081951 RefSeq:NP_999351.1
UniGene:Ssc.17223 ProteinModelPortal:Q865W2
Ensembl:ENSSSCT00000008446 GeneID:397383 KEGG:ssc:397383
ArrayExpress:Q865W2 Uniprot:Q865W2
Length = 486
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 4 QFPDDFKCPISLEIMSDPVILSSGHTFDRA---SIQRWLDSGHRTCPITKLPLPDQPSLI 60
+ D +CP+ LE+ +P++L GH++ + S+ R LDS R CP+ + + D S
Sbjct: 9 ELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELR-CPVCRQEV-DSSSSP 66
Query: 61 PNHALRSLISNFTRTPLPKPQL--EHANP 87
PN +L +I P+PQ+ H NP
Sbjct: 67 PNVSLARVIEALQLPGDPEPQVCTHHRNP 95
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 114 (45.2 bits), Expect = 0.00051, P = 0.00051
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 240 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QDQLIPNLAM 297
Query: 66 RSLISNF 72
+ +I F
Sbjct: 298 KEVIDAF 304
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 8 DFKC-PISLEIMSDPVILSSGHTFDRASIQRWLDS-GHRTCPITKLPLPDQPSLIPNHAL 65
D+ C IS E+M +P I SG T+DR I+ L GH P+T+ PL Q LIPN A+
Sbjct: 229 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLT-QEQLIPNLAM 286
Query: 66 RSLISNF 72
+ +I F
Sbjct: 287 KEVIDAF 293
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 56/266 (21%), Positives = 107/266 (40%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+L + S S++R KL ++G + ++ L S+ K+ +V
Sbjct: 71 KLLRKSPVKSSARSKLADAGVIPPLVPML-FSSNVDARHASLLALLNLAVRNERNKIEIV 129
Query: 172 AEGAVSRVVAALRFGSPDCRAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKLI 231
GAV ++ L+ + R +A I +L+ NKA I L+ +L +G +
Sbjct: 130 KAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVP-PLLIQMLSSGT-V 187
Query: 232 REKKEAATALYALTSFPENRKRVVSCGAV-PILMRLADAG-----LERAVEVLS-ILVKC 284
+ K +A TAL+ L++ E ++ AV P++ L + E+A ++ IL
Sbjct: 188 QGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHS 247
Query: 285 KEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDS-RKEGVLDIC 343
++GR + + V+ ++ GS +++ ++ KEG +
Sbjct: 248 EDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGL 307
Query: 344 MGLLEDDNEKVRRNANNLIQTLSGNP 369
+ D K R A L+ L P
Sbjct: 308 LSSTVDGTSKSRDRARVLLDLLRETP 333
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 92 (37.4 bits), Expect = 0.00081, P = 0.00081
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASI-----QRWLDSGHRTCPITKLPLPDQPSLI- 60
++ CPI LE+++ P+ L GH+F +A + + LD G +CP+ ++ QP I
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISY--QPENIR 68
Query: 61 PN 62
PN
Sbjct: 69 PN 70
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 92 (37.4 bits), Expect = 0.00081, P = 0.00081
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASIQ-RWLDSGHR-TCPITKLPLPDQPSLIPNHA 64
++ CPI LE + DPV ++ GH F R+ + W D CP+ + P + S N
Sbjct: 12 EESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYK-SFRRNPQ 70
Query: 65 LRSL 68
LR+L
Sbjct: 71 LRNL 74
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 100 (40.3 bits), Expect = 0.00087, P = 0.00087
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 11 CPISLEIMSDPVILSSGHTFDRASIQRWLDSGHRT--CPITKLPLPDQPSLIPNHALRSL 68
C + LE + +PVI+ GH F +A I RW + R CP+ + SL PN L S+
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR-KTSRYRSLRPNRQLGSM 87
Query: 69 ISNFTRTPLPKPQLEHANPNPQ 90
+ + K ++ + PQ
Sbjct: 88 VEIAKQLQAVKRKIRDESLCPQ 109
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 56/261 (21%), Positives = 108/261 (41%)
Query: 112 QLTKLSKRDSASRRKLTESGAVSAVLNCLKIHSDGFTLQEKAXXXXXXXXXXXXXKVGLV 171
+LT LS++ R+KL E +S +L+ L+ D T + KV +V
Sbjct: 23 ELTNLSRKQ---RQKLAEREIISPLLSMLQ-SQDCITTEVALSALLSLAFGSERNKVRIV 78
Query: 172 AEGAVSRVVAALRFGSPDC-RAIAATIITSLAVVEVNKATIGDYPYAINALVSLLQNGKL 230
GAV ++ L+ + +A + L+ NK + + LV L+ +L
Sbjct: 79 KSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMAS-TRLVQLLVGLIGLDRL 137
Query: 231 -IREKKEAATALYALTSFPENRKRVVSCGAVPILMRL---ADAGLERAVEVLSILVKC-K 285
I+ K + L L++ + V++ GA L+++ D E A + +++L
Sbjct: 138 TIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELADKAVALLENIIS 197
Query: 286 EGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEIC-GDSRKEGVLDICM 344
E + + G +GV V+ ++ GS++ + +E G +EGV+ +
Sbjct: 198 HSPESVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLL 257
Query: 345 GLLEDDNEKVRRNANNLIQTL 365
+ D + + A L+ L
Sbjct: 258 QVSVDGTRRAKEMARELLLLL 278
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQR-WLDSGHRTCPI--TKLPLPDQP 57
MA+ DD+ CP+ +I PVILS GH+F + +Q+ W + CP+ T+ + D P
Sbjct: 1 MASSAKDDYTCPVCQDIFKTPVILSCGHSFCQECLQQCWRSENTQECPVCRTRSSIADPP 60
Query: 58 SLIPNHALRSL 68
N AL++L
Sbjct: 61 V---NLALQNL 68
>ZFIN|ZDB-GENE-061009-3 [details] [associations]
symbol:trim35-31 "tripartite motif containing 35-31"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-061009-3 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:FP016234 IPI:IPI00627838 Ensembl:ENSDART00000057464
Bgee:F1Q8S8 Uniprot:F1Q8S8
Length = 455
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00096
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 1 MATQFPDDFKCPISLEIMSDPVILSSGHTFDRASIQR-WLDSGHRTCPITKLPLP-DQPS 58
MA+ ++F CPI EI DPV+LS H+F R +Q+ W + CP+ + D P
Sbjct: 1 MASLSEENFSCPICHEIFKDPVVLSCSHSFCRECLQQYWRAVDIQECPVCRRRSSRDDP- 59
Query: 59 LIPNH-ALRSLISNFTRTPLPKP 80
PN+ L++L +F + KP
Sbjct: 60 --PNNLVLKNLCESFLKERKEKP 80
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 104 (41.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 7 DDFKCPISLEIMSDPVILSSGHTFDRASI-----QRWLDSGHRTCPITKLPLPDQPSLI- 60
++ CPI LE+++ P+ L GH+F +A + + LD G +CP+ ++ QP I
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESSCPVCRISY--QPENIR 68
Query: 61 PNHALRSLISNFTRTPL-PKPQ-LEHANPNPQTLI 93
PN + +++ L P+ Q ++H + + L+
Sbjct: 69 PNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLL 103
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 211 IGDYPYAIN-ALVSLLQNGKLIREKKEAATALYALTSFPENRKRVVSC----GAVPILMR 265
I D + + +++ LLQ + ++ E T L +FP+NR+RV G + +
Sbjct: 232 ISDLEHRLQGSVMELLQGVDGVIKRMENVT-LKKPETFPKNRRRVFRAPDLKGMLEVFRE 290
Query: 266 LADAGLERA-VEVLSILVKCKEGREEMMRVS 295
L D V V + C E+M +VS
Sbjct: 291 LTDVRRYWVDVTVAPNNISCAVISEDMRQVS 321
Score = 38 (18.4 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 334 SRKEG-VLDICMGLLEDDNEKVRRNAN 359
S+K +L +C G D + +N N
Sbjct: 366 SKKSAWILGVCAGFQPDATCNIEKNEN 392
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 372 330 0.00089 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 104
No. of states in DFA: 606 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.25u 0.08s 23.33t Elapsed: 00:00:03
Total cpu time: 23.27u 0.08s 23.35t Elapsed: 00:00:03
Start: Sat May 11 09:58:56 2013 End: Sat May 11 09:58:59 2013
WARNINGS ISSUED: 1