Query 017404
Match_columns 372
No_of_seqs 274 out of 2416
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:52:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 7E-28 2.4E-32 212.9 12.7 139 104-248 5-144 (172)
2 3oi8_A Uncharacterized protein 99.9 1.7E-26 5.7E-31 200.7 14.1 138 105-248 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 1.5E-25 5.2E-30 199.0 13.5 124 122-248 13-137 (173)
4 3lv9_A Putative transporter; C 99.9 6.3E-25 2.2E-29 188.2 11.7 123 124-248 2-125 (148)
5 3oco_A Hemolysin-like protein 99.9 1.3E-24 4.4E-29 187.7 6.8 119 128-248 3-123 (153)
6 3lfr_A Putative metal ION tran 99.9 2.4E-22 8.1E-27 170.3 11.2 103 144-248 2-107 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 9.6E-22 3.3E-26 164.9 13.8 105 142-248 2-106 (129)
8 3hf7_A Uncharacterized CBS-dom 99.9 5.6E-22 1.9E-26 166.9 10.7 103 144-248 1-107 (130)
9 3kxr_A Magnesium transporter, 99.9 9.6E-21 3.3E-25 172.7 18.5 127 106-248 25-154 (205)
10 3i8n_A Uncharacterized protein 99.9 8.3E-22 2.8E-26 165.3 9.2 106 141-248 2-109 (130)
11 3nqr_A Magnesium and cobalt ef 99.8 5.2E-21 1.8E-25 159.7 12.0 103 144-248 2-106 (127)
12 3k6e_A CBS domain protein; str 99.8 2.1E-21 7.1E-26 169.5 9.8 110 135-248 4-122 (156)
13 4esy_A CBS domain containing m 99.8 6.5E-21 2.2E-25 167.4 11.8 112 131-248 6-143 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 2.1E-19 7.3E-24 170.6 14.0 117 126-248 116-237 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 7.6E-19 2.6E-23 179.4 16.5 134 105-248 110-257 (473)
16 2oux_A Magnesium transporter; 99.8 3.7E-18 1.3E-22 163.1 15.8 117 126-248 118-239 (286)
17 2qrd_G Protein C1556.08C; AMPK 99.8 5.4E-19 1.8E-23 170.3 9.6 125 127-252 3-151 (334)
18 3t4n_C Nuclear protein SNF4; C 99.8 2.4E-19 8.2E-24 172.0 6.4 214 124-358 8-248 (323)
19 4gqw_A CBS domain-containing p 99.8 2.4E-18 8.2E-23 146.2 11.7 104 143-248 3-123 (152)
20 3kpb_A Uncharacterized protein 99.8 1.7E-18 5.8E-23 142.4 10.3 100 145-248 1-100 (122)
21 3gby_A Uncharacterized protein 99.8 5.2E-18 1.8E-22 141.4 11.9 101 143-248 3-106 (128)
22 2emq_A Hypothetical conserved 99.8 4.7E-18 1.6E-22 146.0 12.0 108 137-248 3-119 (157)
23 3lqn_A CBS domain protein; csg 99.8 2.4E-18 8.3E-23 146.9 10.1 105 140-248 10-123 (150)
24 3ctu_A CBS domain protein; str 99.8 2.1E-18 7.2E-23 148.5 9.5 108 137-248 7-122 (156)
25 2ef7_A Hypothetical protein ST 99.7 1.1E-17 3.9E-22 139.7 12.4 102 142-248 1-105 (133)
26 3sl7_A CBS domain-containing p 99.7 6.1E-18 2.1E-22 148.1 10.6 103 144-248 3-136 (180)
27 2yzi_A Hypothetical protein PH 99.7 2.7E-17 9.2E-22 138.3 14.1 104 140-248 2-109 (138)
28 3k2v_A Putative D-arabinose 5- 99.7 4.4E-18 1.5E-22 145.7 8.8 102 145-248 28-133 (149)
29 2rc3_A CBS domain; in SITU pro 99.7 1.9E-17 6.6E-22 138.8 11.4 100 146-248 7-112 (135)
30 3fhm_A Uncharacterized protein 99.7 1.6E-17 5.5E-22 144.7 10.6 109 138-248 17-131 (165)
31 3ddj_A CBS domain-containing p 99.7 3.9E-18 1.3E-22 161.5 7.1 216 105-358 64-285 (296)
32 2p9m_A Hypothetical protein MJ 99.7 4.1E-17 1.4E-21 136.9 12.5 103 142-248 5-116 (138)
33 2rih_A Conserved protein with 99.7 3.2E-17 1.1E-21 138.7 11.6 99 145-248 5-108 (141)
34 1o50_A CBS domain-containing p 99.7 6E-17 2.1E-21 139.8 12.3 102 141-248 12-133 (157)
35 2pfi_A Chloride channel protei 99.7 4.1E-17 1.4E-21 140.7 10.9 109 137-248 5-128 (164)
36 3fv6_A YQZB protein; CBS domai 99.7 7.5E-17 2.6E-21 139.7 12.6 102 142-248 14-121 (159)
37 1yav_A Hypothetical protein BS 99.7 2.8E-17 9.4E-22 142.1 9.8 104 141-248 10-122 (159)
38 1pbj_A Hypothetical protein; s 99.7 4.1E-17 1.4E-21 134.4 10.2 99 145-248 1-103 (125)
39 2v8q_E 5'-AMP-activated protei 99.7 1.5E-17 5.1E-22 160.1 8.2 123 123-248 15-156 (330)
40 4fry_A Putative signal-transdu 99.7 7.8E-17 2.7E-21 138.7 11.8 101 145-248 7-116 (157)
41 2j9l_A Chloride channel protei 99.7 7E-17 2.4E-21 142.1 11.2 105 143-248 9-146 (185)
42 2nyc_A Nuclear protein SNF4; b 99.7 8.3E-17 2.8E-21 135.6 10.1 103 142-248 5-121 (144)
43 2o16_A Acetoin utilization pro 99.7 1.2E-16 3.9E-21 138.8 10.9 102 143-248 3-116 (160)
44 1y5h_A Hypothetical protein RV 99.7 5.2E-17 1.8E-21 135.6 8.3 102 143-248 6-112 (133)
45 1pvm_A Conserved hypothetical 99.7 1.3E-16 4.3E-21 141.6 11.2 100 145-248 9-113 (184)
46 3kh5_A Protein MJ1225; AMPK, A 99.7 1.1E-16 3.7E-21 149.3 10.5 182 146-358 4-205 (280)
47 2uv4_A 5'-AMP-activated protei 99.7 2.4E-16 8.2E-21 135.3 10.7 101 142-248 20-131 (152)
48 3kh5_A Protein MJ1225; AMPK, A 99.7 3.3E-17 1.1E-21 152.8 4.5 210 105-356 51-279 (280)
49 1vr9_A CBS domain protein/ACT 99.6 2.7E-15 9.1E-20 136.9 14.4 99 144-248 12-110 (213)
50 1zfj_A Inosine monophosphate d 99.6 2.6E-15 8.8E-20 153.6 14.4 131 105-248 54-191 (491)
51 3ddj_A CBS domain-containing p 99.6 7.8E-16 2.7E-20 145.6 9.6 184 141-357 16-213 (296)
52 2yzq_A Putative uncharacterize 99.6 6.1E-16 2.1E-20 144.8 8.7 112 143-258 58-174 (282)
53 3org_A CMCLC; transporter, tra 99.6 3E-16 1E-20 165.4 5.8 104 143-248 451-606 (632)
54 3t4n_C Nuclear protein SNF4; C 99.6 3.6E-15 1.2E-19 142.7 11.5 104 141-248 183-300 (323)
55 3usb_A Inosine-5'-monophosphat 99.6 7.1E-15 2.4E-19 151.4 14.4 131 105-248 77-214 (511)
56 4fxs_A Inosine-5'-monophosphat 99.6 7E-16 2.4E-20 158.3 4.8 132 104-249 52-190 (496)
57 3l2b_A Probable manganase-depe 99.6 3.5E-15 1.2E-19 138.2 8.8 101 144-248 6-224 (245)
58 3pc3_A CG1753, isoform A; CBS, 99.6 6.2E-15 2.1E-19 152.2 11.3 102 142-248 381-487 (527)
59 2d4z_A Chloride channel protei 99.6 6.8E-15 2.3E-19 138.4 10.2 60 141-203 9-69 (250)
60 2yzq_A Putative uncharacterize 99.5 9.3E-15 3.2E-19 136.7 8.7 98 145-248 1-98 (282)
61 1me8_A Inosine-5'-monophosphat 99.5 2E-15 7E-20 155.1 2.8 131 105-248 61-201 (503)
62 2qrd_G Protein C1556.08C; AMPK 99.5 7.7E-14 2.6E-18 134.1 12.1 102 143-248 180-295 (334)
63 4avf_A Inosine-5'-monophosphat 99.5 3.2E-15 1.1E-19 153.3 2.2 129 105-248 52-187 (490)
64 2cu0_A Inosine-5'-monophosphat 99.5 4.3E-15 1.5E-19 152.0 2.6 136 105-257 57-197 (486)
65 2v8q_E 5'-AMP-activated protei 99.5 3E-13 1E-17 129.9 12.4 102 144-248 189-303 (330)
66 1vrd_A Inosine-5'-monophosphat 99.3 3.3E-13 1.1E-17 138.2 2.7 111 128-248 82-195 (494)
67 4af0_A Inosine-5'-monophosphat 99.2 2.8E-12 9.5E-17 130.8 1.9 109 131-249 129-239 (556)
68 1jcn_A Inosine monophosphate d 99.2 5.9E-13 2E-17 137.0 -4.2 111 146-259 109-224 (514)
69 3ghd_A A cystathionine beta-sy 98.8 7.7E-09 2.6E-13 78.1 7.0 65 156-223 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.7 4.5E-08 1.6E-12 72.2 7.2 63 157-222 2-69 (70)
71 1vr9_A CBS domain protein/ACT 98.6 2.3E-08 7.8E-13 90.7 4.3 104 144-252 71-175 (213)
72 4esy_A CBS domain containing m 98.4 1.6E-07 5.6E-12 81.5 5.3 40 209-248 17-56 (170)
73 3ghd_A A cystathionine beta-sy 98.4 7.7E-07 2.6E-11 67.0 6.5 29 220-248 2-30 (70)
74 3l2b_A Probable manganase-depe 98.2 2.1E-06 7.3E-11 78.7 7.9 40 209-248 6-45 (245)
75 3lv9_A Putative transporter; C 98.2 3.4E-06 1.2E-10 71.0 7.3 40 209-248 22-63 (148)
76 4fry_A Putative signal-transdu 98.2 1.7E-06 5.7E-11 73.6 5.1 59 142-205 75-133 (157)
77 3kpb_A Uncharacterized protein 98.1 3.8E-06 1.3E-10 67.9 6.8 59 143-205 60-118 (122)
78 3k2v_A Putative D-arabinose 5- 98.1 4.6E-06 1.6E-10 70.4 7.3 39 210-248 28-68 (149)
79 3gby_A Uncharacterized protein 98.1 2.6E-06 8.8E-11 70.0 5.6 40 209-248 4-43 (128)
80 3fio_A A cystathionine beta-sy 98.1 4.8E-06 1.7E-10 61.1 6.5 30 219-248 1-30 (70)
81 2yzi_A Hypothetical protein PH 98.1 5.6E-06 1.9E-10 68.5 7.4 40 209-248 6-45 (138)
82 2rih_A Conserved protein with 98.1 7E-06 2.4E-10 68.4 7.6 39 210-248 5-43 (141)
83 2o16_A Acetoin utilization pro 98.1 5.9E-06 2E-10 70.8 7.1 40 209-248 4-43 (160)
84 3fv6_A YQZB protein; CBS domai 98.1 3.8E-06 1.3E-10 71.8 5.8 62 141-204 77-141 (159)
85 2ef7_A Hypothetical protein ST 98.1 1.1E-05 3.9E-10 66.1 8.2 40 209-248 3-42 (133)
86 1pbj_A Hypothetical protein; s 98.1 4.9E-06 1.7E-10 67.5 5.7 59 142-205 62-120 (125)
87 3lhh_A CBS domain protein; str 98.0 1.3E-05 4.3E-10 69.7 8.7 57 143-204 105-161 (172)
88 3ctu_A CBS domain protein; str 98.0 6.4E-06 2.2E-10 69.8 6.5 39 210-248 15-55 (156)
89 2p9m_A Hypothetical protein MJ 98.0 9.2E-06 3.1E-10 67.1 7.3 40 209-248 7-46 (138)
90 3oco_A Hemolysin-like protein 98.0 1.1E-05 3.6E-10 68.5 7.4 57 144-205 85-141 (153)
91 3lfr_A Putative metal ION tran 98.0 8.1E-06 2.8E-10 68.0 6.4 58 143-205 68-125 (136)
92 2rc3_A CBS domain; in SITU pro 98.0 8E-06 2.7E-10 67.4 6.4 59 142-205 71-129 (135)
93 2d4z_A Chloride channel protei 98.0 1E-05 3.4E-10 75.7 7.7 40 209-248 12-51 (250)
94 1pvm_A Conserved hypothetical 98.0 1.5E-05 5.2E-10 69.7 8.1 60 142-205 72-131 (184)
95 4gqw_A CBS domain-containing p 98.0 5E-06 1.7E-10 69.5 4.7 60 142-205 82-141 (152)
96 3k6e_A CBS domain protein; str 98.0 8.2E-06 2.8E-10 70.2 6.2 38 211-248 16-55 (156)
97 2pfi_A Chloride channel protei 98.0 1.1E-05 3.6E-10 68.6 6.8 40 209-248 12-51 (164)
98 3fhm_A Uncharacterized protein 98.0 9.9E-06 3.4E-10 69.6 6.6 61 141-206 89-149 (165)
99 3lqn_A CBS domain protein; csg 98.0 6.4E-06 2.2E-10 69.2 5.3 40 209-248 14-55 (150)
100 1y5h_A Hypothetical protein RV 98.0 6.5E-06 2.2E-10 67.6 5.1 58 143-205 72-129 (133)
101 3jtf_A Magnesium and cobalt ef 97.9 1.1E-05 3.7E-10 66.5 6.1 57 143-204 67-123 (129)
102 2nyc_A Nuclear protein SNF4; b 97.9 2E-05 6.8E-10 65.3 7.5 39 210-248 8-49 (144)
103 2emq_A Hypothetical conserved 97.9 1.3E-05 4.4E-10 67.8 6.2 40 209-248 10-51 (157)
104 3sl7_A CBS domain-containing p 97.9 9.3E-06 3.2E-10 70.0 5.5 60 141-204 94-153 (180)
105 3i8n_A Uncharacterized protein 97.9 2E-05 6.8E-10 64.8 7.1 57 143-204 70-126 (130)
106 1yav_A Hypothetical protein BS 97.9 1.2E-05 4.1E-10 68.5 5.8 40 209-248 13-54 (159)
107 3nqr_A Magnesium and cobalt ef 97.9 1.2E-05 4E-10 65.9 5.6 58 143-205 67-124 (127)
108 3hf7_A Uncharacterized CBS-dom 97.9 1.7E-05 5.7E-10 65.6 6.2 57 143-204 68-124 (130)
109 3ocm_A Putative membrane prote 97.9 2.5E-05 8.5E-10 68.3 7.3 40 209-248 35-76 (173)
110 3kxr_A Magnesium transporter, 97.9 1.5E-05 5.1E-10 71.9 5.8 60 142-205 113-172 (205)
111 2uv4_A 5'-AMP-activated protei 97.9 1.7E-05 5.7E-10 67.1 5.8 59 144-204 86-148 (152)
112 1o50_A CBS domain-containing p 97.9 2.5E-05 8.4E-10 66.4 6.9 40 209-248 15-55 (157)
113 3oi8_A Uncharacterized protein 97.8 1.7E-05 5.7E-10 67.7 5.4 55 143-202 101-155 (156)
114 1me8_A Inosine-5'-monophosphat 97.8 1.4E-05 4.8E-10 81.9 4.6 100 143-246 159-260 (503)
115 2j9l_A Chloride channel protei 97.8 3.1E-05 1.1E-09 67.1 5.9 58 142-204 105-162 (185)
116 3usb_A Inosine-5'-monophosphat 97.7 9E-05 3.1E-09 76.1 9.8 106 142-251 172-279 (511)
117 2yvy_A MGTE, Mg2+ transporter 97.6 5.3E-05 1.8E-09 71.1 5.5 61 142-206 196-256 (278)
118 2oux_A Magnesium transporter; 97.5 6.2E-05 2.1E-09 71.2 4.9 59 142-204 198-256 (286)
119 3pc3_A CG1753, isoform A; CBS, 97.5 0.00011 3.9E-09 75.3 7.0 40 209-248 383-423 (527)
120 4avf_A Inosine-5'-monophosphat 97.3 0.00017 5.7E-09 73.7 5.2 102 143-248 145-248 (490)
121 3org_A CMCLC; transporter, tra 97.3 0.00017 5.8E-09 75.8 5.3 56 146-206 569-624 (632)
122 2zy9_A Mg2+ transporter MGTE; 97.3 0.0002 6.9E-09 72.7 5.7 59 142-204 216-274 (473)
123 4fxs_A Inosine-5'-monophosphat 97.2 0.00023 7.8E-09 72.8 4.2 61 143-205 147-207 (496)
124 1vrd_A Inosine-5'-monophosphat 97.1 0.00031 1.1E-08 71.5 4.5 101 143-246 153-255 (494)
125 4af0_A Inosine-5'-monophosphat 96.9 0.00044 1.5E-08 70.8 3.5 58 143-204 198-255 (556)
126 1jcn_A Inosine monophosphate d 96.9 0.00059 2E-08 69.8 4.4 99 143-245 171-272 (514)
127 2cu0_A Inosine-5'-monophosphat 96.9 0.00098 3.3E-08 67.8 5.8 98 143-248 148-247 (486)
128 1zfj_A Inosine monophosphate d 96.7 0.0054 1.8E-07 62.1 9.7 100 143-246 150-251 (491)
129 2jaf_A Halorhodopsin, HR; chro 50.4 1E+02 0.0035 28.5 10.2 40 49-90 177-216 (274)
130 1xio_A Anabaena sensory rhodop 24.9 2.9E+02 0.0098 25.1 8.7 42 48-91 143-186 (261)
131 2l6x_A GPR, green-light absorb 24.3 1.9E+02 0.0063 26.1 7.2 19 73-91 172-190 (243)
132 3ug9_A Archaeal-type opsin 1, 24.1 4.6E+02 0.016 24.8 10.8 22 70-91 228-249 (333)
133 4h33_A LMO2059 protein; bilaye 21.0 2.5E+02 0.0086 22.6 6.8 17 45-61 53-69 (137)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=7e-28 Score=212.87 Aligned_cols=139 Identities=24% Similarity=0.462 Sum_probs=92.6
Q ss_pred cccCHHHHHHHHHhcccccCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceee
Q 017404 104 ALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVP 183 (372)
Q Consensus 104 ~~~s~eEL~~ll~~~~~e~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriP 183 (372)
..+|++||+.+++ ++.+.|.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45667999999999999999999999999999988999999999998 999999999999999
Q ss_pred EeeCCCCcEEEEEehhhHhccCCC-CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 184 VYYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 184 V~d~~~d~iVGIVs~kDLl~~~~~-~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
|++++.++++|+|+.+|+++.... ...+++++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 144 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD 144 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 998543799999999999985432 357899998 9999999999999999999999999999999
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=1.7e-26 Score=200.67 Aligned_cols=138 Identities=23% Similarity=0.386 Sum_probs=125.9
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeE
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 184 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV 184 (372)
.+|++||+.+++. +.++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4799999999984 5567999999999999999999999999999988899999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEehhhHhccCCC-CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 185 YYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 185 ~d~~~d~iVGIVs~kDLl~~~~~-~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++.++++|+|+.+|++..... ...+++++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98654699999999999987544 457899996 6689999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=1.5e-25 Score=199.00 Aligned_cols=124 Identities=17% Similarity=0.288 Sum_probs=109.0
Q ss_pred cCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhH
Q 017404 122 AGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL 201 (372)
Q Consensus 122 ~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDL 201 (372)
+.++|.++++|++++.+++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3456999999999999999999999999999988899999999998 999999999999999998554799999999999
Q ss_pred hccCCC-CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 202 LTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 202 l~~~~~-~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+..... ...+++ |+++++++++++++.+|++.|.+++.+++||+|
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd 137 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD 137 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe
Confidence 875321 245677 578999999999999999999999999999999
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.92 E-value=6.3e-25 Score=188.17 Aligned_cols=123 Identities=20% Similarity=0.434 Sum_probs=98.3
Q ss_pred CCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhc
Q 017404 124 KGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 203 (372)
Q Consensus 124 e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~ 203 (372)
++|.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999988899999999998 99999999999999999854379999999999987
Q ss_pred cCCCC-CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 204 IHPED-EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 204 ~~~~~-~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
....+ ..+++++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 53222 57899998 9999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.90 E-value=1.3e-24 Score=187.72 Aligned_cols=119 Identities=24% Similarity=0.418 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEe-eCCCCcEEEEEehhhHhccCC
Q 017404 128 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVY-YEEPTNIIGLILVKNLLTIHP 206 (372)
Q Consensus 128 l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~-d~~~d~iVGIVs~kDLl~~~~ 206 (372)
++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|+++...
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6778999999999999999999999988899999999998 99999999999999999 544479999999999987532
Q ss_pred C-CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 207 E-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 207 ~-~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
. ...+++++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 123 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID 123 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 1 257899998 9999999999999999999999999999999
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.87 E-value=2.4e-22 Score=170.30 Aligned_cols=103 Identities=31% Similarity=0.519 Sum_probs=92.1
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC---CCCcccccccccCC
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIRRI 220 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~---~~~~~V~dim~r~v 220 (372)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 578999999988899999999998 99999999999999999854479999999999997543 2356899996 668
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVID 107 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 9999999999999999999999999999
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.87 E-value=9.6e-22 Score=164.87 Aligned_cols=105 Identities=35% Similarity=0.587 Sum_probs=94.5
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP 221 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~ 221 (372)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.......+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988899999999998 999999999999999998544799999999999987555567899996 6788
Q ss_pred eecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 222 RVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 222 ~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=5.6e-22 Score=166.90 Aligned_cols=103 Identities=24% Similarity=0.396 Sum_probs=92.2
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCC----CcccccccccC
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED----EVPVKSVTIRR 219 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~----~~~V~dim~r~ 219 (372)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++....+ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988899999999998 9999999999999999975557999999999998764432 24688986 88
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 99999999999999999999999999999
No 9
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.86 E-value=9.6e-21 Score=172.74 Aligned_cols=127 Identities=6% Similarity=0.067 Sum_probs=114.0
Q ss_pred cCHHHHHHHHHhcccccCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHc---CCcee
Q 017404 106 FRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK---GHSRV 182 (372)
Q Consensus 106 ~s~eEL~~ll~~~~~e~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~---~~sri 182 (372)
+.+++.+.++. .+++++++++++++.+++.+|+++|++ +++++++++|+. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 45666667765 378999999999999999999999997 788999999998 999999987 88999
Q ss_pred eEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 183 PVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 183 PV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
||++ +.++++|+|+.+|++... ...+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 92 ~Vvd-~~~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 92 FIVD-EADKYLGTVRRYDIFKHE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp EEEC-TTCBEEEEEEHHHHTTSC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred EEEc-CCCeEEEEEEHHHHHhCC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 9998 467999999999998753 35789999989999999999999999999999999999999
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.86 E-value=8.3e-22 Score=165.28 Aligned_cols=106 Identities=23% Similarity=0.371 Sum_probs=91.5
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC--CCccccccccc
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIR 218 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~--~~~~V~dim~r 218 (372)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.... ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 467899999999988888999999998 999999999999999998554799999999999875322 356899997 7
Q ss_pred CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 219 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 219 ~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 789999999999999999999999999999
No 11
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.85 E-value=5.2e-21 Score=159.72 Aligned_cols=103 Identities=31% Similarity=0.550 Sum_probs=91.7
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC--CCCcccccccccCCc
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIRRIP 221 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~--~~~~~V~dim~r~v~ 221 (372)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++... ....+++++| ++++
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 578999999877789999999998 99999999999999999854379999999999997542 2456899996 6688
Q ss_pred eecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 222 RVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 222 ~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 12
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.85 E-value=2.1e-21 Score=169.48 Aligned_cols=110 Identities=17% Similarity=0.258 Sum_probs=93.2
Q ss_pred HHHHhh-cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC------
Q 017404 135 IIAGAL-ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------ 207 (372)
Q Consensus 135 ~i~~vl-~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~------ 207 (372)
|+.+.+ +|-..+++++|+|+.+++++++++|+. ++++.|.+++++++||++ +.++++|+|+.+|+++....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd-~~~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVT-DEKQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEEC-C-CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEc-CCCcEEEEEEecchhhhhhhcccccc
Confidence 344444 345568999999999999999999998 999999999999999998 45799999999999763211
Q ss_pred --CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 208 --DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 208 --~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
...+++++|.++++++++++++.+|++.|.+++ ++||+|
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 356899999999999999999999999998764 599999
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=6.5e-21 Score=167.35 Aligned_cols=112 Identities=17% Similarity=0.240 Sum_probs=97.2
Q ss_pred HHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC---
Q 017404 131 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--- 207 (372)
Q Consensus 131 ~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~--- 207 (372)
.+++.+.+.+ .+++|+|+|++ +++++++++|+. ++++.|.+++++++||+|+ +|+++|+|+.+|+++....
T Consensus 6 ~~~~~~~~~l--~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARAI--RQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHHH--HTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHHH--cCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhccc
Confidence 3455555554 68899999986 788999999998 9999999999999999984 5799999999999874321
Q ss_pred -----------------------CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 208 -----------------------DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 208 -----------------------~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
...+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 13578999999999999999999999999999999999998
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.80 E-value=2.1e-19 Score=170.61 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=107.5
Q ss_pred CCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCceeeEeeCCCCcEEEEEehhh
Q 017404 126 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 200 (372)
Q Consensus 126 G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~-----~~sriPV~d~~~d~iVGIVs~kD 200 (372)
|.++..++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|.++ +++++||+++ .++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECT-TCBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECC-CCCEEEEEEHHH
Confidence 4688899999999999999999999997 788999999998 999999987 7899999984 579999999999
Q ss_pred HhccCCCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 201 LLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 201 Ll~~~~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++... ...+++++|.+++++|++++++.+|++.|++++.+.+||+|
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 98753 35789999989999999999999999999999999999999
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.79 E-value=7.6e-19 Score=179.41 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=119.5
Q ss_pred ccCHHHHHHHHHhcccccCCC---------CCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHH
Q 017404 105 LFRRAELKTLVNLHGNEAGKG---------GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLIL 175 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~---------G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~ 175 (372)
.++++|+..+++.. .++ +.++.++++.+++++++++.+|+++|++ +++++++++|++ ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888742 233 7899999999999999999999999996 889999999998 9999999
Q ss_pred Hc-----CCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 176 EK-----GHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 176 ~~-----~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++ +++++||+|+ .++++|+|+.+|++... .+.+++++|.++++++++++++.++++.|++++.+.+||+|
T Consensus 183 ~~~~~~~~~~~ipVvd~-~~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECT-TSBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECC-CCcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 87 5799999985 47999999999998753 35789999989999999999999999999999999999999
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.77 E-value=3.7e-18 Score=163.08 Aligned_cols=117 Identities=18% Similarity=0.197 Sum_probs=107.1
Q ss_pred CCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCceeeEeeCCCCcEEEEEehhh
Q 017404 126 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 200 (372)
Q Consensus 126 G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~-----~~sriPV~d~~~d~iVGIVs~kD 200 (372)
+.++.+++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|.++ +++++||+++ .++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHH
Confidence 3588889999999999999999999996 788999999998 999999988 8899999984 579999999999
Q ss_pred HhccCCCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 201 LLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 201 Ll~~~~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++... ...+++++|.+++++|++++++.+|++.|.+++.+.+||+|
T Consensus 194 ll~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 194 LIVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp HTTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 98753 35789999989999999999999999999999999999999
No 17
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.77 E-value=5.4e-19 Score=170.28 Aligned_cols=125 Identities=9% Similarity=0.151 Sum_probs=106.4
Q ss_pred CCCHHHHHHHHHhhcccc-cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 127 ELTHDETTIIAGALELTE-KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 127 ~l~~~E~~~i~~vl~l~~-~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
-++++|+++++++++|-+ .+|+|+|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 356788999999998544 99999999999999999999998 9999999999999999996657999999999998632
Q ss_pred --------CCC------Ccccc-------cccccCC--ceecCCCCHHHHHHHHHhcCCcEEEEEecCCC
Q 017404 206 --------PED------EVPVK-------SVTIRRI--PRVPETLPLYEILNEFQKGHSHMAVVVRQYNK 252 (372)
Q Consensus 206 --------~~~------~~~V~-------dim~r~v--~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~ 252 (372)
... ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~ 151 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGE 151 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETT
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCC
Confidence 111 22222 2366777 89999999999999999999999999998876
No 18
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.77 E-value=2.4e-19 Score=171.97 Aligned_cols=214 Identities=12% Similarity=0.135 Sum_probs=142.9
Q ss_pred CCCCCCHHHHHHHHHhhcc-cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHh
Q 017404 124 KGGELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 202 (372)
Q Consensus 124 e~G~l~~~E~~~i~~vl~l-~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl 202 (372)
+.|.++++|+++++++++| .+.+|.|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4467889999999999998 9999999999999999999999998 9999999999999999997667999999999998
Q ss_pred ccCC-----C---------CCcccc------cccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCC-----CCCC
Q 017404 203 TIHP-----E---------DEVPVK------SVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKN-----AEQP 257 (372)
Q Consensus 203 ~~~~-----~---------~~~~V~------dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~-----~~~~ 257 (372)
.... . ....++ ++|.++++++++++++.+|++.|.+++.+.+||+|++|++ .|+.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv 166 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL 166 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe
Confidence 6320 0 011223 3446788999999999999999999999999999987763 1111
Q ss_pred CCCCCcccccccccccccc-cCCCCCchhhhhhhccccccccCCCCCCCCcccccccccccccccccchhhcccCCCCCC
Q 017404 258 ASNPASKSAYGSARDVKID-IDGEKPPQEKVLKTKRPLQKWKSFPNSSNNNLYRTSSRSRKWTKDMYSDILQIDGNPLPK 336 (372)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (372)
+.. +-+. +.+.... .....+......-....+..+-+.. .--.+....+.+.+-..+|+
T Consensus 167 t~~------------di~~~l~~~~~~------~~~~~~~v~~~~~~m~~~~~~v~~~--~~~~~~~~~m~~~~~~~~pV 226 (323)
T 3t4n_C 167 TQY------------RILKFVALNCRE------THFLKIPIGDLNIITQDNMKSCQMT--TPVIDVIQMLTQGRVSSVPI 226 (323)
T ss_dssp EHH------------HHHHHHHHHCGG------GGGCCSBGGGTTCSBCTTCCCBCTT--SBHHHHHHHHHHHTCSEEEE
T ss_pred cHH------------HHHHHHHhcCCc------hhhhhCcHHHcCCCCCCCcEEECCC--CcHHHHHHHHHHcCCCEEEE
Confidence 110 0000 0000000 0000000000000000000000000 00123345566677888999
Q ss_pred CCCCCceEEEEehHHHHHHHHh
Q 017404 337 LPEEEEAVGVITMEDVIEELLQ 358 (372)
Q Consensus 337 ~~~~~~~~giit~~d~~~~~~~ 358 (372)
..++|+++|+||..|+++.+.+
T Consensus 227 vd~~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 227 IDENGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp ECTTCBEEEEEETTHHHHHHHT
T ss_pred ECCCCeEEEEEeHHHHHHHHhh
Confidence 9888999999999999988764
No 19
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=2.4e-18 Score=146.18 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=91.9
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC----------------
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------------- 206 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~---------------- 206 (372)
...+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDE-DWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeC-CCeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999877788999999998 9999999999999999984 469999999999986421
Q ss_pred -CCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 207 -EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 207 -~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
....++.++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 124689999988899999999999999999999999999998
No 20
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.76 E-value=1.7e-18 Score=142.42 Aligned_cols=100 Identities=13% Similarity=0.237 Sum_probs=90.5
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCceec
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 224 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V~ 224 (372)
++|+++|++ +++++++++++. ++++.|.+++++++||+++ +++++|+|+.+|++.....+..+++++|.+++++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999996 677899999998 9999999999999999984 579999999999998644445689999989999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 225 ETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 225 ~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 21
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.75 E-value=5.2e-18 Score=141.41 Aligned_cols=101 Identities=10% Similarity=0.093 Sum_probs=91.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCC---cccccccccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDE---VPVKSVTIRR 219 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~---~~V~dim~r~ 219 (372)
...+|+++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++....+. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 56799999996 567899999998 9999999999999999985 79999999999998654322 5699999999
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999998
No 22
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.75 E-value=4.7e-18 Score=146.00 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=90.4
Q ss_pred HHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC---------
Q 017404 137 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--------- 207 (372)
Q Consensus 137 ~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~--------- 207 (372)
.+...+...+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|++.....
T Consensus 3 ~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 3 WEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp -------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred hhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhcccccchHHh
Confidence 4555678899999999766788999999998 9999999999999999984 5789999999999875432
Q ss_pred CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 208 DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 208 ~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
...++.++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 2468999998999999999999999999999976 99998
No 23
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.75 E-value=2.4e-18 Score=146.93 Aligned_cols=105 Identities=19% Similarity=0.192 Sum_probs=92.6
Q ss_pred hcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC---------CCc
Q 017404 140 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DEV 210 (372)
Q Consensus 140 l~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~---------~~~ 210 (372)
..|.+.+|+++|+|..+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467889999999876788999999998 9999999999999999984 5799999999999875421 346
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 211 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 211 ~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 8999998899999999999999999999875 99998
No 24
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.75 E-value=2.1e-18 Score=148.48 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=93.9
Q ss_pred HHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC--------C
Q 017404 137 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--------D 208 (372)
Q Consensus 137 ~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~--------~ 208 (372)
.+...+...+|+++|+|+.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.... .
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhccccccccc
Confidence 3445677788999999988999999999998 9999999999999999984 5799999999999874321 1
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++ .+||+|
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 56899999899999999999999999999886 699998
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.74 E-value=1.1e-17 Score=139.72 Aligned_cols=102 Identities=17% Similarity=0.238 Sum_probs=91.0
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC---CCCccccccccc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIR 218 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~---~~~~~V~dim~r 218 (372)
+.+.+|+++|++ +++++++++++. ++++.|.+++++++||++ +++++|+|+.+|++.... ....+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999997 577899999998 999999999999999998 468999999999987422 124689999888
Q ss_pred CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 219 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 219 ~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999999999999999999998
No 26
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.74 E-value=6.1e-18 Score=148.12 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=91.4
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC------------------
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------------ 205 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~------------------ 205 (372)
..+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877888999999998 9999999999999999984 56999999999998531
Q ss_pred -------------CCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 206 -------------PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 206 -------------~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.....+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1124679999988899999999999999999999999999999
No 27
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.74 E-value=2.7e-17 Score=138.26 Aligned_cols=104 Identities=14% Similarity=0.260 Sum_probs=91.6
Q ss_pred hcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHh-ccCCC---CCcccccc
Q 017404 140 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE---DEVPVKSV 215 (372)
Q Consensus 140 l~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl-~~~~~---~~~~V~di 215 (372)
+.|...+|+++|++ +++++++++++. ++++.|.+++++++||+++ +++++|+|+.+|++ ..... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 678999999998 9999999999999999984 57999999999997 33321 34689999
Q ss_pred cccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 216 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 216 m~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
|.++++++++++++.+|++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 98999999999999999999999999999 998
No 28
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.73 E-value=4.4e-18 Score=145.69 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=92.2
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC----CCcccccccccCC
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 220 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~----~~~~V~dim~r~v 220 (372)
.+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDD-DMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECT-TCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECC-CCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999876888999999998 9999999999999999984 5799999999999875332 3568999998999
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++++++.+|++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 29
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.73 E-value=1.9e-17 Score=138.85 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=89.5
Q ss_pred ccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhc-cCC----CCCcccccccccC
Q 017404 146 TASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHP----EDEVPVKSVTIRR 219 (372)
Q Consensus 146 tV~dIMtpr-~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~-~~~----~~~~~V~dim~r~ 219 (372)
+|+++|+|+ .+++++++++++. ++++.|.+++++++||++ +++++|+|+.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999965 5788999999998 999999999999999997 468999999999985 321 1356899999899
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999998
No 30
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.6e-17 Score=144.73 Aligned_cols=109 Identities=9% Similarity=0.095 Sum_probs=95.8
Q ss_pred HhhcccccccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC-----CCCcc
Q 017404 138 GALELTEKTASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVP 211 (372)
Q Consensus 138 ~vl~l~~~tV~dIMtpr-~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~-----~~~~~ 211 (372)
....+...+|+++|+|+ .+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++... ....+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 44567889999999974 4678999999998 9999999999999999984 579999999999986421 13468
Q ss_pred cccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 212 VKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 212 V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 9999989999999999999999999999999999999
No 31
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.72 E-value=3.9e-18 Score=161.55 Aligned_cols=216 Identities=15% Similarity=0.183 Sum_probs=147.1
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeE
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 184 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV 184 (372)
.+|..|+...+.. .. . ..+...+.+.+.+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~---~----~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YC---K----DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cc---c----ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4688888776641 10 0 0334556666778899999997 677999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEehhhHhccCCC--CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCCCCCC
Q 017404 185 YYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPA 262 (372)
Q Consensus 185 ~d~~~d~iVGIVs~kDLl~~~~~--~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~~~~~ 262 (372)
+++ .++++|+++.+|++..... ...+++++|.++++++++++++.++++.|.+++.+.+||+|++|...|..+..-.
T Consensus 130 vd~-~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 130 VDI-NDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp ECT-TSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred EcC-CCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 974 5789999999999875322 3468999998999999999999999999999999999999988876544333100
Q ss_pred cccccccccccccc-cCC---CCCchhhhhhhccccccccCCCCCCCCcccccccccccccccccchhhcccCCCCCCCC
Q 017404 263 SKSAYGSARDVKID-IDG---EKPPQEKVLKTKRPLQKWKSFPNSSNNNLYRTSSRSRKWTKDMYSDILQIDGNPLPKLP 338 (372)
Q Consensus 263 ~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (372)
-....+ ... ... ...+...+ -+. +.++-+.... -.+....+.+.+-+++|+..
T Consensus 209 ~~~~~~-----~~~~~~~~~~~~~~v~~~----------m~~------~~~~v~~~~~--l~~a~~~m~~~~~~~l~Vvd 265 (296)
T 3ddj_A 209 IKQLAK-----AVDKLDPDYFYGKVVKDV----------MVT------NLVTIDELAS--VNRAAAEMIVKRIGSLLILN 265 (296)
T ss_dssp HHHHHH-----HHHHTCTHHHHTCBHHHH----------SBC------CCCBCCTTSB--HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHH-----HHhhcChhhhcCcCHHHH----------hCC------CCeEECCCCc--HHHHHHHHHHcCCCEEEEEC
Confidence 000000 000 000 00000000 000 0000000000 12335566777888999998
Q ss_pred CCCceEEEEehHHHHHHHHh
Q 017404 339 EEEEAVGVITMEDVIEELLQ 358 (372)
Q Consensus 339 ~~~~~~giit~~d~~~~~~~ 358 (372)
++|+++||||..|+++++.+
T Consensus 266 ~~g~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 266 KDNTIRGIITERDLLIALHH 285 (296)
T ss_dssp TTSCEEEEEEHHHHHHHHHH
T ss_pred CCCeEEEEEcHHHHHHHHHH
Confidence 89999999999999999874
No 32
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.72 E-value=4.1e-17 Score=136.91 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=90.6
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhH-hccCCC---CCcccccccc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL-LTIHPE---DEVPVKSVTI 217 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDL-l~~~~~---~~~~V~dim~ 217 (372)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||+++ .++++|+++.+|+ +..... ...+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECC-CCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999986 677899999998 9999999999999999984 4799999999999 764322 3568999988
Q ss_pred cCCceecCCCCHHHHHHHHHhcC-----CcEEEEEe
Q 017404 218 RRIPRVPETLPLYEILNEFQKGH-----SHMAVVVR 248 (372)
Q Consensus 218 r~v~~V~~~~~l~~aL~~M~~~~-----~~~a~VVD 248 (372)
++++++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 89999999999999999999999 99999998
No 33
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.72 E-value=3.2e-17 Score=138.69 Aligned_cols=99 Identities=10% Similarity=0.154 Sum_probs=88.6
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCC--cEEEEEehhhHhccCC---CCCcccccccccC
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT--NIIGLILVKNLLTIHP---EDEVPVKSVTIRR 219 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d--~iVGIVs~kDLl~~~~---~~~~~V~dim~r~ 219 (372)
.+|+++|++ +++++++++++. ++++.|.+++++++||+++ .+ +++|+|+.+|+++... ....+++++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999996 778999999998 9999999999999999984 45 8999999999987521 1256899999899
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++++ ++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999998
No 34
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=6e-17 Score=139.80 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=90.5
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCce-eeEeeCCCCcEEEEEehhhHhccC--------------
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSR-VPVYYEEPTNIIGLILVKNLLTIH-------------- 205 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sr-iPV~d~~~d~iVGIVs~kDLl~~~-------------- 205 (372)
.+...+|+++|++ +++++++++|+. ++++.|.++++++ +||+++ + +++|+|+.+|+++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~-~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARD-N-KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEET-T-EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEEC-C-EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4577889999986 788999999998 9999999999999 999984 3 899999999998641
Q ss_pred -----CCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 206 -----PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 206 -----~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.....+++++|.+ ++++++++++.+|++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1235689999877 89999999999999999999999999998
No 35
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.71 E-value=4.1e-17 Score=140.70 Aligned_cols=109 Identities=11% Similarity=0.146 Sum_probs=90.8
Q ss_pred HHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeC-CCCcEEEEEehhhHhccCCC--------
Q 017404 137 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYE-EPTNIIGLILVKNLLTIHPE-------- 207 (372)
Q Consensus 137 ~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~-~~d~iVGIVs~kDLl~~~~~-------- 207 (372)
.+.+.+...+|+++|++ +++++++++++. ++++.|.+++++++||+++ +.++++|+|+.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 34566788999999997 677899999998 9999999999999999985 25799999999999864311
Q ss_pred CCcccccccccC------CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 208 DEVPVKSVTIRR------IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 208 ~~~~V~dim~r~------v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
...++.++|.++ +.++++++++.+|++.|.+++.+.+||+|
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 135688887665 78899999999999999999999999998
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.71 E-value=7.5e-17 Score=139.66 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=90.3
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC----CCCCcccccccc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVTI 217 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~----~~~~~~V~dim~ 217 (372)
+..++|+++|++ . +++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.. .....+++++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 377899999985 3 4899999998 9999999999999999984 57999999999998743 123568999988
Q ss_pred c--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 218 R--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 218 r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 121 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIK 121 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 7 889999999999999999999999999999
No 37
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.71 E-value=2.8e-17 Score=142.05 Aligned_cols=104 Identities=18% Similarity=0.265 Sum_probs=91.0
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC---------CCCcc
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------EDEVP 211 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~---------~~~~~ 211 (372)
.+...+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|++.... ....+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567889999999766788999999998 9999999999999999984 469999999999987432 13468
Q ss_pred cccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 212 VKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 212 V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+.++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 999998899999999999999999998865 99998
No 38
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=4.1e-17 Score=134.44 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=88.0
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC----CCcccccccccCC
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 220 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~----~~~~V~dim~r~v 220 (372)
++|+++|++ ++.++++++++. ++++.|.+++++++||++ +++++|+|+.+|+++.... ...+++++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999986 678899999998 999999999999999998 4689999999999864211 3568999988899
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 39
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.70 E-value=1.5e-17 Score=160.06 Aligned_cols=123 Identities=9% Similarity=0.257 Sum_probs=99.3
Q ss_pred CCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHh
Q 017404 123 GKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 202 (372)
Q Consensus 123 ~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl 202 (372)
.++|.+.+.+++.+.+.| .+.+|+|+|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~l--~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTFM--KSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHHH--HHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHHH--HcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 345777777777888875 7889999999999999999999998 9999999999999999996657899999999998
Q ss_pred ccCCC------------CCc-------ccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 203 TIHPE------------DEV-------PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 203 ~~~~~------------~~~-------~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..... ... .++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 156 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID 156 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe
Confidence 63110 011 23467888999999999999999999999999999998
No 40
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.70 E-value=7.8e-17 Score=138.71 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=90.3
Q ss_pred cccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC-----CCCcccccc
Q 017404 145 KTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSV 215 (372)
Q Consensus 145 ~tV~dIMtpr----~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~-----~~~~~V~di 215 (372)
.+|+++|+|+ .+++++++++++. ++++.|.+++++++||.+ .++++|+|+.+|+++... ....+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999976 6788999999998 999999999999999954 579999999999987431 135789999
Q ss_pred cccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 216 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 216 m~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 989999999999999999999999999999998
No 41
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.69 E-value=7e-17 Score=142.14 Aligned_cols=105 Identities=17% Similarity=0.280 Sum_probs=91.2
Q ss_pred cccccccccccCcc--EEEE--eCCCChHHHHHHHHHHcCCceeeEee-CCCCcEEEEEehhhHhccCC-----------
Q 017404 143 TEKTASDAMTPIAE--TFAI--DINAKLDKELMNLILEKGHSRVPVYY-EEPTNIIGLILVKNLLTIHP----------- 206 (372)
Q Consensus 143 ~~~tV~dIMtpr~~--vvtV--~~d~tv~~ea~~~m~~~~~sriPV~d-~~~d~iVGIVs~kDLl~~~~----------- 206 (372)
...+|+++|++..+ ++++ ++++++. ++++.|.+++++++||++ ++.++++|+|+.+|+++...
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 67899999998533 6678 9999998 999999999999999993 25679999999999986421
Q ss_pred -----------------CCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 207 -----------------EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 207 -----------------~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
....+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 234679999888999999999999999999999999999998
No 42
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=8.3e-17 Score=135.61 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=87.4
Q ss_pred cccccccc---ccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-----CCcccc
Q 017404 142 LTEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVK 213 (372)
Q Consensus 142 l~~~tV~d---IMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~-----~~~~V~ 213 (372)
+-+.++++ +|++ +++++++++++. ++++.|.+++++++||+++ .++++|+++.+|+++.... ...++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcC-CCcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45667888 7774 778899999998 9999999999999999984 4789999999999874321 246789
Q ss_pred ccccc------CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 214 SVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 214 dim~r------~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 98865 688999999999999999999999999998
No 43
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.68 E-value=1.2e-16 Score=138.77 Aligned_cols=102 Identities=20% Similarity=0.190 Sum_probs=90.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC------------CCCCc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------PEDEV 210 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~------------~~~~~ 210 (372)
...+|+++|++ +++++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|++... .....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 677899999998 9999999999999999984 56899999999998642 12356
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 211 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 211 ~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++.++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 89999988999999999999999999999999999999
No 44
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=5.2e-17 Score=135.65 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=88.7
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHh-ccCCC----CCcccccccc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE----DEVPVKSVTI 217 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl-~~~~~----~~~~V~dim~ 217 (372)
.-.+|+++|++ +++++++++++. ++++.|.+++++++||+++ +++++|+|+.+|++ +.... ...+++++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999986 677899999998 9999999999999999974 46899999999998 33221 2468999988
Q ss_pred cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 218 RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 218 r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 9999999999999999999999999999999
No 45
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.68 E-value=1.3e-16 Score=141.64 Aligned_cols=100 Identities=17% Similarity=0.248 Sum_probs=90.0
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC-----CCCcccccccccC
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRR 219 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~-----~~~~~V~dim~r~ 219 (372)
.+|+++|++ +++++++++++. ++++.|.+++++++||+++ +++++|+++.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~-~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDD-NGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999985 778999999998 9999999999999999984 478999999999987532 2346899998889
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 113 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVD 113 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 99999999999999999999999999999
No 46
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.68 E-value=1.1e-16 Score=149.31 Aligned_cols=182 Identities=16% Similarity=0.192 Sum_probs=125.4
Q ss_pred cccc-ccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCC----------------
Q 017404 146 TASD-AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED---------------- 208 (372)
Q Consensus 146 tV~d-IMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~---------------- 208 (372)
++.+ +|++ +++++++++|+. ++++.|.+++++++||++++.++++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 4455 4554 788999999998 9999999999999999985467999999999998754221
Q ss_pred --CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCCCCCCcccccccccccccc-cCCCCCchh
Q 017404 209 --EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGSARDVKID-IDGEKPPQE 285 (372)
Q Consensus 209 --~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (372)
+.+++++|.++++++++++++.+|++.|.+++.+.+||+|+.|...|+.+..- -.. +.+......
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~d------------l~~~~~~~~~~~~ 148 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERD------------VIRALLDKIDENE 148 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHH------------HHHHHGGGSCTTC
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHH------------HHHHHhhcCCCCC
Confidence 35799999889999999999999999999999999999998777544332210 000 000000000
Q ss_pred hhhhhccccccccCCCCCCCCcccccccccccccccccchhhcccCCCCCCCCCCCceEEEEehHHHHHHHHh
Q 017404 286 KVLKTKRPLQKWKSFPNSSNNNLYRTSSRSRKWTKDMYSDILQIDGNPLPKLPEEEEAVGVITMEDVIEELLQ 358 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~giit~~d~~~~~~~ 358 (372)
++-.. -+. +..+-+. ..--.+....+.+.+-+.+|+. ++|+++|+||.+|+++.+.+
T Consensus 149 ~v~~~-------m~~------~~~~v~~--~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 149 VIDDY-------ITR------DVIVATP--GERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp BSGGG-------CBC------SCCCBCT--TCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTS
T ss_pred CHHHH-------hCC------CCeEECC--CCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhh
Confidence 00000 000 0000000 0001233455666778889999 89999999999999998753
No 47
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.67 E-value=2.4e-16 Score=135.27 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=87.5
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-----CCccccccc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSVT 216 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~-----~~~~V~dim 216 (372)
+.+.+|+++ .+++++++++++. ++++.|.+++++.+||+++ +++++|+|+.+|+++.... ...++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 366778888 2677899999998 9999999999999999984 4789999999999874321 246789997
Q ss_pred c------cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 217 I------RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 217 ~------r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
. ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 5 7899999999999999999999999999999
No 48
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.66 E-value=3.3e-17 Score=152.84 Aligned_cols=210 Identities=15% Similarity=0.201 Sum_probs=141.1
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCCHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeE
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 184 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV 184 (372)
.+|..|+..++.. +...+.+. .....+++...+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 4788898877641 11111111 111223334447899999996 778999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEehhhHhccCCC---CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCCCCC
Q 017404 185 YYEEPTNIIGLILVKNLLTIHPE---DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNP 261 (372)
Q Consensus 185 ~d~~~d~iVGIVs~kDLl~~~~~---~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~~~~ 261 (372)
+++ .++++|+++.+|+++.... ...+++++|.++++++++++++.++++.|.+++.+.+||+ ++|...|..+..
T Consensus 121 vd~-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~- 197 (280)
T 3kh5_A 121 VND-ENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITST- 197 (280)
T ss_dssp ECT-TCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHH-
T ss_pred EcC-CCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHH-
Confidence 984 5799999999999874321 2347999998999999999999999999999999999999 666654433321
Q ss_pred Ccccccccccccccc-cC----------CC-----CCchhhhhhhccccccccCCCCCCCCcccccccccccccccccch
Q 017404 262 ASKSAYGSARDVKID-ID----------GE-----KPPQEKVLKTKRPLQKWKSFPNSSNNNLYRTSSRSRKWTKDMYSD 325 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~-~~----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (372)
+... +. |. ..+...+ .+. +.++-+.... -.+....
T Consensus 198 -----------dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----------m~~------~~~~v~~~~~--l~~a~~~ 248 (280)
T 3kh5_A 198 -----------DFIKLLGSDWAFNHMQTGNVREITNVRMEEI----------MKR------DVITAKEGDK--LKKIAEI 248 (280)
T ss_dssp -----------HHHHHHTSHHHHHHHHSCCTHHHHHCBHHHH----------SBS------SCCCBCTTCB--HHHHHHH
T ss_pred -----------HHHHHHhhhhhhhhhcccchhhhhCCcHHHH----------hcC------CCEEECCCCC--HHHHHHH
Confidence 0000 00 00 0000000 000 0000000000 1233556
Q ss_pred hhcccCCCCCCCCCCCceEEEEehHHHHHHH
Q 017404 326 ILQIDGNPLPKLPEEEEAVGVITMEDVIEEL 356 (372)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~giit~~d~~~~~ 356 (372)
..+.+-+++|+..++|+++|+||..|+++++
T Consensus 249 m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 249 MVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred HHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 6778889999998888999999999998764
No 49
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=2.7e-15 Score=136.90 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=89.4
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCcee
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRV 223 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V 223 (372)
..+++++|++ +++++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|++.... +.+++++|.++++++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 4578999986 778999999998 9999999999999999984 578999999999987654 568999998999999
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 224 PETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 224 ~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++++.+|++.|.+++.+.+||+|
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd 110 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVD 110 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEc
Confidence 9999999999999999999999999
No 50
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.62 E-value=2.6e-15 Score=153.57 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=110.5
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCC-----HHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 179 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~-----~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~ 179 (372)
.++++||...+.. ....|.+. +++++++.+++.+ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 4788899988873 22224444 6778888888754 679996 778899999998 99999999999
Q ss_pred ceeeEeeC-CCCcEEEEEehhhHhccCCCCCccccccccc-CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 180 SRVPVYYE-EPTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 180 sriPV~d~-~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r-~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++||+++ +.++++|+|+.+|++... ..+.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd 191 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD 191 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 99999982 357999999999998743 346789999887 899999999999999999999999999999
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=7.8e-16 Score=145.65 Aligned_cols=184 Identities=16% Similarity=0.138 Sum_probs=129.9
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-------------
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------------- 207 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~------------- 207 (372)
.....+|+|+|++ +++++++++|+. ++++.|.+++++++||++ ++++|+++.+|++.....
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~ 89 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLYH 89 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHHH
T ss_pred hhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhHH
Confidence 4567899999996 778999999998 999999999999999997 689999999999986531
Q ss_pred -CCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCCCCCCcccccccccccccccCCCCCchhh
Q 017404 208 -DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGSARDVKIDIDGEKPPQEK 286 (372)
Q Consensus 208 -~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (372)
.+.+++++|.++++++++++++.+|++.|.+++.+.+||+|+.|...|..+..-.-....+ .....+...
T Consensus 90 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~---------~~~~~~v~~ 160 (296)
T 3ddj_A 90 ISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD---------LDEIFPVKV 160 (296)
T ss_dssp HHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGG---------SCCCCBHHH
T ss_pred HhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhc---------ccccccHHH
Confidence 1457999999999999999999999999999999999999976665433222100000000 000001111
Q ss_pred hhhhccccccccCCCCCCCCcccccccccccccccccchhhcccCCCCCCCCCCCceEEEEehHHHHHHHH
Q 017404 287 VLKTKRPLQKWKSFPNSSNNNLYRTSSRSRKWTKDMYSDILQIDGNPLPKLPEEEEAVGVITMEDVIEELL 357 (372)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~giit~~d~~~~~~ 357 (372)
+.. + +..+-+.. .--.+....+.+.+-+.+|+..++|+++|+||.+|+++.+.
T Consensus 161 ~m~--~--------------~~~~v~~~--~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 161 FMS--T--------------KVQTIYKE--VRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HSB--C--------------SCCCEETT--SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhc--C--------------CCeEECCC--CCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 100 0 00000000 00123345556677788999988999999999999998876
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=6.1e-16 Score=144.78 Aligned_cols=112 Identities=19% Similarity=0.181 Sum_probs=92.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhc-cCCC----CCcccccccc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHPE----DEVPVKSVTI 217 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~-~~~~----~~~~V~dim~ 217 (372)
.+.+++++|.+ ++.++++++++. ++++.|.+++.+++||+++ .++++|+++.+|+++ .... ...+++++|.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~ 133 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDS-KGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQ 133 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSB
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhC
Confidence 35789999986 567899999998 9999999999999999984 468999999999987 5543 2467899998
Q ss_pred cCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCC
Q 017404 218 RRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPA 258 (372)
Q Consensus 218 r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~ 258 (372)
++++++++++++.++++.|.+++.+.+||+|++|...|+.+
T Consensus 134 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit 174 (282)
T 2yzq_A 134 RYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVD 174 (282)
T ss_dssp SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEE
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEE
Confidence 89999999999999999999999999999998886554444
No 53
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.61 E-value=3e-16 Score=165.45 Aligned_cols=104 Identities=14% Similarity=0.047 Sum_probs=91.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHH-HcCCceeeEeeCCCCcEEEEEehhhHhccCCCC-------------
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLIL-EKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED------------- 208 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~-~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~------------- 208 (372)
.+.+|+|+|+|+++++++++++|++ ++.+.|. +++++++||+|+ +++++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999998 9999999 799999999985 57999999999998753211
Q ss_pred --------------------------------------CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 --------------------------------------EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 --------------------------------------~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.+++.++++++++.++++.|++++.+.+||+|
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve 606 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE 606 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE
Confidence 0037889999999999999999999999999999999996
No 54
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.59 E-value=3.6e-15 Score=142.75 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=90.7
Q ss_pred cccccccccc---cccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-----CCccc
Q 017404 141 ELTEKTASDA---MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPV 212 (372)
Q Consensus 141 ~l~~~tV~dI---Mtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~-----~~~~V 212 (372)
.+.+.+|+++ |++ +++++++++++. ++++.|.+++++++||+++ .|+++|+|+.+|+++.... ...++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3456789999 764 778999999998 9999999999999999984 5699999999999875332 24578
Q ss_pred cccccc------CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 213 KSVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 213 ~dim~r------~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 300 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 300 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC
Confidence 999877 789999999999999999999999999999
No 55
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.59 E-value=7.1e-15 Score=151.39 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=105.7
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCC-----HHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 179 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~-----~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~ 179 (372)
.+|++++...+.-.+ .-|.|. +++.+++.++.. ++++|++ +++++++++|+. ++++.|.++++
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 578899877665221 123332 345556777763 5577875 678999999998 99999999999
Q ss_pred ceeeEeeCC-CCcEEEEEehhhHhccCCCCCccccccccc-CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 180 SRVPVYYEE-PTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 180 sriPV~d~~-~d~iVGIVs~kDLl~~~~~~~~~V~dim~r-~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++||+++. +++++|+|+.+|++.. ...+.+++++|.+ +++++++++++.++++.|++++.+.+||+|
T Consensus 145 s~~pVvd~g~~~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD 214 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD 214 (511)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred cEEEEEecCCCCEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe
Confidence 999999841 5799999999999863 3346789999887 899999999999999999999999999999
No 56
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.57 E-value=7e-16 Score=158.32 Aligned_cols=132 Identities=17% Similarity=0.257 Sum_probs=101.3
Q ss_pred cccCHHHHHHHHHhcccccCCCCCC-----CHHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcC
Q 017404 104 ALFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 178 (372)
Q Consensus 104 ~~~s~eEL~~ll~~~~~e~~e~G~l-----~~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~ 178 (372)
..+|++++...+... ..-|.| .+++++++.++ ++++++|++ +++++++++|+. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 357899998877632 122334 56778889888 466889985 778999999998 9999999999
Q ss_pred CceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccc-c-CCceecCCCCHHHHHHHHHhcCCcEEEEEec
Q 017404 179 HSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 249 (372)
Q Consensus 179 ~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~-r-~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDE 249 (372)
++++||+++ +++++|+|+.+|++.. ...+.+++++|. + +++++++++++.++++.|++++.+.+||+||
T Consensus 120 ~s~~PVvd~-~~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTE-NNELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECS-SSBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEcc-CCEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 999999985 5799999999999743 334678999986 4 6899999999999999999999999999994
No 57
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.57 E-value=3.5e-15 Score=138.18 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=87.9
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC----------------
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------------- 207 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~---------------- 207 (372)
..+|+++|++ +++++++++++. ++++.|.+++++++||+|+ +|+++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678999999998 9999999999999999984 5799999999999863200
Q ss_pred --------------------------------------------------------------------------------
Q 017404 208 -------------------------------------------------------------------------------- 207 (372)
Q Consensus 208 -------------------------------------------------------------------------------- 207 (372)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------CCcccccccc-cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 208 ---------------------DEVPVKSVTI-RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 208 ---------------------~~~~V~dim~-r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
...+++++|. +++.++++++++.+|++.|.+++.+.+||+|
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd 224 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVID 224 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEEC
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEc
Confidence 0235778888 8999999999999999999999999999999
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.57 E-value=6.2e-15 Score=152.20 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=88.6
Q ss_pred ccccccccccccCccEEEEeCC-CChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC----CCCCccccccc
Q 017404 142 LTEKTASDAMTPIAETFAIDIN-AKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVT 216 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d-~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~----~~~~~~V~dim 216 (372)
+.+.+|+++|++ ++++++++ +|+. ++++.|.+++++++||++++.++++|+|+.+|+++.. .....+|+++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 457899999995 77889999 9998 9999999999999999983457999999999998632 22357899999
Q ss_pred ccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 217 IRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 217 ~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.++++++++++++.++++.|.+++ ++||+|
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd 487 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILG 487 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEe
Confidence 999999999999999999997665 579999
No 59
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.56 E-value=6.8e-15 Score=138.37 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=53.2
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCC-CCcEEEEEehhhHhc
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE-PTNIIGLILVKNLLT 203 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~-~d~iVGIVs~kDLl~ 203 (372)
...+++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||++
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3467899999996 788999999998 99999999999999999854 357999999999975
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=9.3e-15 Score=136.70 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=70.3
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCceec
Q 017404 145 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 224 (372)
Q Consensus 145 ~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V~ 224 (372)
++|+++|++ +++++++++|+. ++++.|.+++++++||+++ .|+++|+++.+|++.... +.+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECT-TCCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999995 778899999998 9999999999999999984 579999999999987543 4679999888899999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 225 ETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 225 ~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++++.+|++.|.+++.+.+||+|
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd 98 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVD 98 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEc
Confidence 999999999999999999999999
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.52 E-value=2e-15 Score=155.15 Aligned_cols=131 Identities=8% Similarity=0.093 Sum_probs=19.9
Q ss_pred ccCHHHHHHHHHhcccccCCCCC----CC-HHHHHHHHHhhcccccccccc-cccCccEEEEeCCCChHHHHHHHHHHcC
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGE----LT-HDETTIIAGALELTEKTASDA-MTPIAETFAIDINAKLDKELMNLILEKG 178 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~----l~-~~E~~~i~~vl~l~~~tV~dI-Mtpr~~vvtV~~d~tv~~ea~~~m~~~~ 178 (372)
.++++++...+...+ ..|. ++ +++++++.++.. .++ |++ +++++++++|+. ++++.|.+++
T Consensus 61 ~vt~~~la~~la~~g----g~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALAREG----GISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhCC----CcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 467889887776311 1111 22 456777766553 455 987 788999999998 9999999999
Q ss_pred CceeeEeeCC--CCcEEEEEehhhHhccCCCCCcccccccccC--CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 179 HSRVPVYYEE--PTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 179 ~sriPV~d~~--~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~--v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++||++++ .++++|+|+.+|++......+.+++++|.++ ++++++++++.+|++.|++++.+.+||+|
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD 201 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID 201 (503)
T ss_dssp --------------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 9999999853 2799999999999863223457899998776 99999999999999999999999999999
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.50 E-value=7.7e-14 Score=134.09 Aligned_cols=102 Identities=13% Similarity=0.218 Sum_probs=88.2
Q ss_pred ccccccc---ccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-----CCccccc
Q 017404 143 TEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKS 214 (372)
Q Consensus 143 ~~~tV~d---IMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~-----~~~~V~d 214 (372)
...+|++ +|++ +++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.... ...++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4577889 4874 677899999998 9999999999999999984 5689999999999875332 2457889
Q ss_pred cccc------CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 215 VTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 215 im~r------~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 295 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVD 295 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 9874 889999999999999999999999999999
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.50 E-value=3.2e-15 Score=153.27 Aligned_cols=129 Identities=18% Similarity=0.278 Sum_probs=22.7
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCC-----HHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 179 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~-----~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~ 179 (372)
.+|++++...+... ...|.+. +++++++.++. +++++|++ +++++++++|+. ++++.|.++++
T Consensus 52 tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHHH-----HCCC------------------------------
T ss_pred hhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhCC
Confidence 47889999777632 1223343 55677777764 57889985 778999999998 99999999999
Q ss_pred ceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccc-c-CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 180 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 180 sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~-r-~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+++||++ .++++|+|+.+|+... ...+.+++++|. + +++++++++++.++++.|++++.+.+||+|
T Consensus 120 s~~pVvd--~g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD 187 (490)
T 4avf_A 120 SGFPVVE--QGELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD 187 (490)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CEEEEEE--CCEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 9999998 4699999999999743 234578999987 4 699999999999999999999999999999
No 64
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.49 E-value=4.3e-15 Score=152.04 Aligned_cols=136 Identities=16% Similarity=0.232 Sum_probs=23.1
Q ss_pred ccCHHHHHHHHHhcccccCCCCCCC-----HHHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 017404 105 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 179 (372)
Q Consensus 105 ~~s~eEL~~ll~~~~~e~~e~G~l~-----~~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~ 179 (372)
.+++.|+...+.. ....|.+. +++++++.+++++. ++|++ +++++++++++. ++.+.|.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchh-----hcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4678888887763 22223343 57788999998764 47874 888999999998 99999999999
Q ss_pred ceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCC
Q 017404 180 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQP 257 (372)
Q Consensus 180 sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~ 257 (372)
+++||+++ ++++|+|+.+|++. ..+.+++++|.++++++++++++.++++.|++++.+.+||+|++|...|++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii 197 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI 197 (486)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE
Confidence 99999985 79999999999986 345789999888899999999999999999999999999999655443333
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.46 E-value=3e-13 Score=129.95 Aligned_cols=102 Identities=17% Similarity=0.226 Sum_probs=86.0
Q ss_pred ccccccc--cccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCC-----Cccccccc
Q 017404 144 EKTASDA--MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPVKSVT 216 (372)
Q Consensus 144 ~~tV~dI--Mtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~-----~~~V~dim 216 (372)
..+++++ |+ ..+++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++..... ..++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 54 13677899999998 9999999999999999984 56899999999998754321 45788887
Q ss_pred ------ccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 217 ------IRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 217 ------~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 47899999999999999999999999999999
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.32 E-value=3.3e-13 Score=138.17 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=7.3
Q ss_pred CCHH-HHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC
Q 017404 128 LTHD-ETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 206 (372)
Q Consensus 128 l~~~-E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~ 206 (372)
++.+ .++.+.++. +++++|++ +++++++++++. ++++.|.+++++.+||+|+ +++++|+|+.+|++.. .
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~~-~ 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRFE-K 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHhh-c
Confidence 3443 345555554 46789986 788999999998 9999999999999999984 4689999999999863 2
Q ss_pred CCCccccccccc--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 207 EDEVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 207 ~~~~~V~dim~r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 195 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 195 (494)
T ss_dssp --------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 245789999887 899999999999999999999999999999
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.20 E-value=2.8e-12 Score=130.81 Aligned_cols=109 Identities=11% Similarity=0.267 Sum_probs=8.6
Q ss_pred HHHHHHHHhhcccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCC--CCcEEEEEehhhHhccCCCC
Q 017404 131 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHPED 208 (372)
Q Consensus 131 ~E~~~i~~vl~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~--~d~iVGIVs~kDLl~~~~~~ 208 (372)
++.++++++-.++. .|.. +++++.++.|+. ++.+++.+++++.+||+++. +++++|||+.||+... +.
T Consensus 129 ~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d~ 198 (556)
T 4af0_A 129 EQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--DA 198 (556)
T ss_dssp HHHHHHHHHHHCCC------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--cc
Confidence 45677777765543 4552 678999999998 99999999999999999842 4689999999998653 34
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEec
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 249 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVDE 249 (372)
+.+|+++|++++++++++.++.+|.+.|++++...+||||+
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp -----------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 67899999999999999999999999999999999999994
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.18 E-value=5.9e-13 Score=137.03 Aligned_cols=111 Identities=10% Similarity=0.216 Sum_probs=62.0
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCC--CCcEEEEEehhhHhccCC-CCCccccccccc--CC
Q 017404 146 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHP-EDEVPVKSVTIR--RI 220 (372)
Q Consensus 146 tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~--~d~iVGIVs~kDLl~~~~-~~~~~V~dim~r--~v 220 (372)
+++++|++ +++++++++++. ++++.|.+++++++||+|++ .++++|+|+.+|+..... ....+++++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 567899999998 99999999999999999853 479999999999976421 235689999887 89
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCCC
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPAS 259 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~~~~~~~~ 259 (372)
+++++++++.++++.|.+++.+.+||+|+.|...|+.+.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~ 224 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIAR 224 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----C
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEH
Confidence 999999999999999999999999999966555444443
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.82 E-value=7.7e-09 Score=78.14 Aligned_cols=65 Identities=12% Similarity=0.294 Sum_probs=54.4
Q ss_pred cEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC-CC----CCcccccccccCCcee
Q 017404 156 ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH-PE----DEVPVKSVTIRRIPRV 223 (372)
Q Consensus 156 ~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~-~~----~~~~V~dim~r~v~~V 223 (372)
+++++++++|+. ++++.|.+++++++||++ +|+++|+++.+|+++.. .. .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999998 999999999999999997 36899999999997532 22 2468999999988764
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.67 E-value=4.5e-08 Score=72.23 Aligned_cols=63 Identities=13% Similarity=0.267 Sum_probs=53.5
Q ss_pred EEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCC-----CCcccccccccCCce
Q 017404 157 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSVTIRRIPR 222 (372)
Q Consensus 157 vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~-----~~~~V~dim~r~v~~ 222 (372)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++.... ...+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 56899999998 9999999999999999984 799999999999885322 246799998877654
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.60 E-value=2.3e-08 Score=90.73 Aligned_cols=104 Identities=13% Similarity=0.197 Sum_probs=52.4
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCc-e
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP-R 222 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~-~ 222 (372)
+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ .++++|+|+.+|+++.... ...+.+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~~-~~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALIE-ALAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHHH-SCC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHHH-HhcCCCCcEEEEEEe
Confidence 4569999997 667899999998 9999999999999999984 4799999999999874321 1122333322111 1
Q ss_pred ecCCCCHHHHHHHHHhcCCcEEEEEecCCC
Q 017404 223 VPETLPLYEILNEFQKGHSHMAVVVRQYNK 252 (372)
Q Consensus 223 V~~~~~l~~aL~~M~~~~~~~a~VVDEyG~ 252 (372)
.....++.++.+.|.+++.+.++|++..|.
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp ------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 134445999999999999999999875444
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.44 E-value=1.6e-07 Score=81.47 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=38.4
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+.+|+++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd 56 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVD 56 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEc
Confidence 4689999999999999999999999999999999999999
No 73
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.35 E-value=7.7e-07 Score=67.00 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=27.7
Q ss_pred CceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 220 IPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 220 v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++++.+++++.+|++.|.+++.+.+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 57899999999999999999999999998
No 74
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.23 E-value=2.1e-06 Score=78.73 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=38.1
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd 45 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD 45 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 4679999999999999999999999999999999999999
No 75
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.17 E-value=3.4e-06 Score=70.99 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=37.6
Q ss_pred Cccccccccc--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd 63 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCR 63 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEES
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc
Confidence 5689999987 899999999999999999999999999998
No 76
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.15 E-value=1.7e-06 Score=73.57 Aligned_cols=59 Identities=24% Similarity=0.327 Sum_probs=52.8
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ +|+++|+|+.+|+++..
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l 133 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSV 133 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHH
Confidence 357889999996 677899999998 999999999999999998 36999999999999853
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.14 E-value=3.8e-06 Score=67.90 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=51.7
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
...+++++|.+ ++.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|+++..
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHHHh
Confidence 34489999986 667899999998 9999999999999999984 57999999999998754
No 78
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.13 E-value=4.6e-06 Score=70.41 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=36.9
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 210 VPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 210 ~~V~dim~r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 68 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD 68 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 479999888 899999999999999999999999999999
No 79
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.13 E-value=2.6e-06 Score=70.00 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=38.2
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 43 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLD 43 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE
Confidence 5689999999999999999999999999999999999999
No 80
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.13 E-value=4.8e-06 Score=61.08 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=28.0
Q ss_pred CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 219 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 219 ~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
++.++++++++.+|++.|.+++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 356899999999999999999999999999
No 81
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.11 E-value=5.6e-06 Score=68.50 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=37.6
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 45 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN 45 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 4678999989999999999999999999999999999998
No 82
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.09 E-value=7e-06 Score=68.40 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=37.0
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 210 VPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 210 ~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 43 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTA 43 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 578999988999999999999999999999999999999
No 83
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.08 E-value=5.9e-06 Score=70.78 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=37.4
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 3578999988999999999999999999999999999998
No 84
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.08 E-value=3.8e-06 Score=71.83 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=54.6
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCC---cEEEEEehhhHhcc
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT---NIIGLILVKNLLTI 204 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d---~iVGIVs~kDLl~~ 204 (372)
...+.+|+++|+++.+++++++++++. ++++.|.+++++++||+++ ++ +++|+|+.+|+++.
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHH
Confidence 346778999999766778999999998 9999999999999999984 45 89999999999874
No 85
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.06 E-value=1.1e-05 Score=66.15 Aligned_cols=40 Identities=20% Similarity=0.182 Sum_probs=37.3
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 3 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 42 (133)
T 2ef7_A 3 EEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD 42 (133)
T ss_dssp CCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred cccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE
Confidence 4578999988899999999999999999999999999998
No 86
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.05 E-value=4.9e-06 Score=67.45 Aligned_cols=59 Identities=22% Similarity=0.288 Sum_probs=52.7
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|+++..
T Consensus 62 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 62 LAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp TTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 467889999986 667899999998 9999999999999999984 7999999999998754
No 87
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.05 E-value=1.3e-05 Score=69.71 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=50.8
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
...+|+++| + +++++++++++. ++++.|.+++..++||+++ .|+++|+|+.+|++..
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~ 161 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDA 161 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHH
Confidence 467899999 3 667999999998 9999999999999999984 5699999999999874
No 88
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.04 E-value=6.4e-06 Score=69.85 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=36.4
Q ss_pred cccccccc--cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 210 VPVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 210 ~~V~dim~--r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.+++++|. ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 55 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC
Confidence 46899987 7889999999999999999999999999998
No 89
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.04 E-value=9.2e-06 Score=67.06 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=37.4
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 46 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID 46 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC
Confidence 4678999988999999999999999999999999999998
No 90
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.01 E-value=1.1e-05 Score=68.51 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=50.9
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 144 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 144 ~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
+.+|+++| + ++.++++++++. ++++.|.+++..++||+++ .|+++|+|+.+|++...
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEEL 141 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHH
Confidence 67899999 3 667999999998 9999999999999999984 57999999999999743
No 91
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.01 E-value=8.1e-06 Score=67.96 Aligned_cols=58 Identities=14% Similarity=0.206 Sum_probs=51.4
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
.+.+++++|.+ +.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|+++..
T Consensus 68 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 68 DSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp GGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC
T ss_pred CCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHH
Confidence 56789999974 57899999998 9999999999999999984 57999999999999754
No 92
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.01 E-value=8e-06 Score=67.38 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=52.6
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||++ + |+++|+|+.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467889999986 667899999998 999999999999999998 3 6999999999998753
No 93
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.01 E-value=1e-05 Score=75.68 Aligned_cols=40 Identities=13% Similarity=0.270 Sum_probs=38.3
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
+..++++|.++++++.+++++.+|.+.|.+++.+.+||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 4689999999999999999999999999999999999998
No 94
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.99 E-value=1.5e-05 Score=69.75 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=53.1
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
....+++++|.+ +++++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|+++..
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTS
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHH
Confidence 456789999986 667899999998 9999999999999999984 46999999999998754
No 95
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.98 E-value=5e-06 Score=69.51 Aligned_cols=60 Identities=23% Similarity=0.432 Sum_probs=51.9
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
..+.+|+++|.+ +++++++++++. ++++.|.+++++++||++ +.|+++|+|+.+|+++..
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHH
Confidence 356789999997 567899999998 999999999999999998 457999999999999753
No 96
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.98 E-value=8.2e-06 Score=70.21 Aligned_cols=38 Identities=8% Similarity=-0.051 Sum_probs=34.7
Q ss_pred ccccccc--cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 211 PVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 211 ~V~dim~--r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.+.++|+ .+++++++++++.+|++.|.+++.+.+||+|
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd 55 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc
Confidence 4678875 5789999999999999999999999999998
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.98 E-value=1.1e-05 Score=68.58 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=37.8
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 5679999989999999999999999999999999999998
No 98
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.98 E-value=9.9e-06 Score=69.59 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=53.9
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 206 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~ 206 (372)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ |+++|+|+.+|+++...
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3457889999985 677899999998 9999999999999999984 79999999999998653
No 99
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.98 E-value=6.4e-06 Score=69.24 Aligned_cols=40 Identities=20% Similarity=0.147 Sum_probs=36.5
Q ss_pred Ccccccccc--cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~--r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|. ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd 55 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLD 55 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEEC
Confidence 357899987 5689999999999999999999999999998
No 100
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.97 E-value=6.5e-06 Score=67.64 Aligned_cols=58 Identities=24% Similarity=0.430 Sum_probs=52.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
.+.+++++|.+ ++.++++++++. ++++.|.+++.+++||+++ |+++|+|+.+|+++..
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 56789999986 667899999998 9999999999999999984 6999999999998754
No 101
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.95 E-value=1.1e-05 Score=66.45 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=49.9
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
.+.+++++|.+ ++++++++++. ++++.|.+++..++||+++ .|+++|+|+.+|+++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQ 123 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHH
Confidence 46789999964 56899999998 9999999999999999984 5699999999999874
No 102
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.94 E-value=2e-05 Score=65.26 Aligned_cols=39 Identities=13% Similarity=0.394 Sum_probs=35.3
Q ss_pred ccccc---ccccCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 210 VPVKS---VTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 210 ~~V~d---im~r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
.++++ +|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 49 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 49 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc
Confidence 45666 7778899999999999999999999999999998
No 103
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.93 E-value=1.3e-05 Score=67.78 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=36.9
Q ss_pred Cccccccccc--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd 51 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD 51 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc
Confidence 4678999875 889999999999999999999999999998
No 104
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.92 E-value=9.3e-06 Score=70.04 Aligned_cols=60 Identities=25% Similarity=0.429 Sum_probs=53.1
Q ss_pred cccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 141 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 141 ~l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||++ +.|+++|+|+.+|+++.
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVD-ADGKLIGILTRGNVVRA 153 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHH
Confidence 4467789999986 567899999998 999999999999999998 45799999999999874
No 105
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.91 E-value=2e-05 Score=64.85 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=50.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
.+.+++++|. ++.++++++++. ++++.|.+++..++||+++ .|+++|+|+.+|+++.
T Consensus 70 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 70 GQKQLGAVMR---PIQVVLNNTALP-KVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEH 126 (130)
T ss_dssp TTSBHHHHSE---ECCEEETTSCHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CcCCHHHHhc---CCcCcCCCCcHH-HHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHH
Confidence 3668999996 356899999998 9999999999999999984 5699999999999864
No 106
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.91 E-value=1.2e-05 Score=68.46 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=37.0
Q ss_pred Cccccccccc--CCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r--~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 54 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD 54 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 4678999877 799999999999999999999999999998
No 107
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.91 E-value=1.2e-05 Score=65.94 Aligned_cols=58 Identities=10% Similarity=0.202 Sum_probs=50.7
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
.+.+++++|.+ +.++++++++. ++++.|.+++..++||+++ .|+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHH
Confidence 46689999964 45899999998 9999999999999999984 56999999999998753
No 108
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=1.7e-05 Score=65.61 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=49.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
...+++++|. ++.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEE 124 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHH
Confidence 3457899994 456899999998 9999999999999999984 5799999999999874
No 109
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.87 E-value=2.5e-05 Score=68.31 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=36.7
Q ss_pred Ccccccccc--cCCceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~--r~v~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+++++|. ++++++++++++.+|++.|.+++...+||+|
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd 76 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR 76 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe
Confidence 568999985 4688999999999999999999999999998
No 110
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.86 E-value=1.5e-05 Score=71.89 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=53.0
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||+| +.|+++|+|+.+|++...
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVID-DAGELIGRVTLRAATALV 172 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHH
Confidence 356789999985 677899999998 999999999999999998 457999999999998753
No 111
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.86 E-value=1.7e-05 Score=67.13 Aligned_cols=59 Identities=15% Similarity=0.294 Sum_probs=51.3
Q ss_pred ccccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 144 EKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 144 ~~tV~dIMtpr----~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
+.++.++|.++ .++.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|+++.
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQA 148 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHH
Confidence 56799999743 3677999999998 9999999999999999984 5699999999999874
No 112
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.86 E-value=2.5e-05 Score=66.42 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=37.5
Q ss_pred CcccccccccCCceecCCCCHHHHHHHHHhcCCcE-EEEEe
Q 017404 209 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHM-AVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~~~l~~aL~~M~~~~~~~-a~VVD 248 (372)
..+++++|.++++++++++++.+|++.|.+++.+. +||+|
T Consensus 15 ~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd 55 (157)
T 1o50_A 15 VKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVAR 55 (157)
T ss_dssp HHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEE
T ss_pred cccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEE
Confidence 35789999999999999999999999999999999 99999
No 113
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.83 E-value=1.7e-05 Score=67.68 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=49.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHh
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 202 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl 202 (372)
.+.+++++|.| ++++++++++. ++++.|.+++..++||+|+ .|+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDE-YGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECT-TSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECC-CCCEEEEEEHHHhc
Confidence 46789999974 56899999998 9999999999999999984 56999999999986
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.77 E-value=1.4e-05 Score=81.86 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=20.4
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCC--
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-- 220 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v-- 220 (372)
.+.+|+++|++..+++++++++++. ++++.|.+++.+++||+|+ .++++|+|+.+|+++...... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999865589999999998 9999999999999999984 579999999999998543221 1222221111
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEE
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVV 246 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~V 246 (372)
..++. ....+.++.|.+.+.+.+.|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23455 66777789999989887544
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.75 E-value=3.1e-05 Score=67.08 Aligned_cols=58 Identities=12% Similarity=0.208 Sum_probs=52.0
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
....+|+++|.+ ++.++++++++. ++++.|.+++.+++||++ .|+++|+|+.+|+++.
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~ 162 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKH 162 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHH
Confidence 456789999986 667899999998 999999999999999998 4699999999999874
No 116
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.73 E-value=9e-05 Score=76.06 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=80.0
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP 221 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~ 221 (372)
-.+.+|+++|++ .++++++++.++. ++++.|.+++...+||+|+ .++++|+|+.+|+++.... ...+.+.+.+..+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~~~~~-p~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEKVIEF-PNSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHC-TTCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHHhhhc-ccchhhhccceee
Confidence 356789999996 5778999999998 9999999999999999984 5799999999999985432 1233444433333
Q ss_pred --eecCCCCHHHHHHHHHhcCCcEEEEEecCC
Q 017404 222 --RVPETLPLYEILNEFQKGHSHMAVVVRQYN 251 (372)
Q Consensus 222 --~V~~~~~l~~aL~~M~~~~~~~a~VVDEyG 251 (372)
.+.......+.++.+.+.+.+.+.|....|
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred eeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 344455567778888999999887765433
No 117
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.60 E-value=5.3e-05 Score=71.12 Aligned_cols=61 Identities=16% Similarity=0.378 Sum_probs=53.4
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 206 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~ 206 (372)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||+++ .|+++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 367789999975 677899999998 9999999999999999984 579999999999998643
No 118
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.53 E-value=6.2e-05 Score=71.17 Aligned_cols=59 Identities=12% Similarity=0.325 Sum_probs=52.6
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
..+.+|+++|++ +++++++++++. ++++.|.+++.+++||+++ .|+++|+|+..|++..
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~ 256 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDV 256 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHH
Confidence 357789999986 677899999998 9999999999999999984 5799999999999874
No 119
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.52 E-value=0.00011 Score=75.34 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=37.8
Q ss_pred CcccccccccCCceecCC-CCHHHHHHHHHhcCCcEEEEEe
Q 017404 209 EVPVKSVTIRRIPRVPET-LPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 209 ~~~V~dim~r~v~~V~~~-~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+|+++|.+++++++++ +++.+|++.|.+++.+.+||+|
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 367999999999999999 9999999999999999999998
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.32 E-value=0.00017 Score=73.69 Aligned_cols=102 Identities=17% Similarity=0.117 Sum_probs=16.9
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCccccccccc--CC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIR--RI 220 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r--~v 220 (372)
.+.+|+++|+|+.++++++++.++. ++++.|.+++...+||+|+ .++++|+|+.+|+++....... ..+.--+ -.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~p~a-~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEKAKTYPLA-SKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTTC-CBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhhhccCcch-hhhccCcceee
Confidence 4668999999765688999999998 9999999999999999984 5799999999999985432111 1111011 11
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..+.....-.+.++.+.+.+...+ ++|
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I-~id 248 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV-VVD 248 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE-EEE
T ss_pred eeeccccchHHHHHHHhhcccceE-Eec
Confidence 124444445566667777777754 344
No 121
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.31 E-value=0.00017 Score=75.80 Aligned_cols=56 Identities=9% Similarity=0.019 Sum_probs=48.6
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCC
Q 017404 146 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 206 (372)
Q Consensus 146 tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~ 206 (372)
+++++|++ +++++++++++. ++++.|.+++.+++||++ +|+++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve--~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTE--RGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEE--TTEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEehhhHHHHHh
Confidence 48999996 667999999998 999999999999999994 468999999999998654
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.30 E-value=0.0002 Score=72.70 Aligned_cols=59 Identities=17% Similarity=0.404 Sum_probs=52.9
Q ss_pred ccccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 142 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 142 l~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|+ .|+++|+|+.+|++..
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~ 274 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDV 274 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHH
Confidence 367899999985 678999999998 9999999999999999984 5799999999999874
No 123
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.15 E-value=0.00023 Score=72.79 Aligned_cols=61 Identities=16% Similarity=0.210 Sum_probs=43.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccC
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 205 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~ 205 (372)
.+.+++++|+|+.++++++++.++. ++++.|.+++...+||+|+ .++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVND-EFQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECT-TSBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHHHhh
Confidence 5678999999766688999999998 9999999999999999984 57999999999999854
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.10 E-value=0.00031 Score=71.47 Aligned_cols=101 Identities=16% Similarity=0.278 Sum_probs=23.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCc-
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP- 221 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~- 221 (372)
.+.+|+++|+++.+++++++++++. ++++.|.+++..++||+|+ .++++|+|+.+|+++..... ...++...+-..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 4568999999755788999999998 9999999999999999984 57999999999999854321 112221001111
Q ss_pred -eecCCCCHHHHHHHHHhcCCcEEEE
Q 017404 222 -RVPETLPLYEILNEFQKGHSHMAVV 246 (372)
Q Consensus 222 -~V~~~~~l~~aL~~M~~~~~~~a~V 246 (372)
-+.......+.+..+.+.+...+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344456778888888888877655
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.90 E-value=0.00044 Score=70.82 Aligned_cols=58 Identities=19% Similarity=0.290 Sum_probs=0.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhcc
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 204 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~ 204 (372)
.+.+|+++||+ ++++++.+.+++ ++.+.|.+++...+||+|+ .++++|+|+.+|+++.
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDS-NGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEcc-CCcEEEEEEechhhhh
Confidence 35689999996 799999999998 9999999999999999984 5799999999999874
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.88 E-value=0.00059 Score=69.81 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=56.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCCc-
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP- 221 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v~- 221 (372)
.+.+++++|++..+++++++++++. ++++.|.+++..++||+|+ +++++|+|+.+|+++...... ...+ +..++.
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVND-CDELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESS-SSCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 4568999999655778999999998 9999999999999999984 579999999999997543211 1111 111111
Q ss_pred --eecCCCCHHHHHHHHHhcCCcEEE
Q 017404 222 --RVPETLPLYEILNEFQKGHSHMAV 245 (372)
Q Consensus 222 --~V~~~~~l~~aL~~M~~~~~~~a~ 245 (372)
.+..+....+.++.+.+.+.+.+.
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v~ 272 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVIV 272 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEEE
Confidence 133333455556666666666443
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.86 E-value=0.00098 Score=67.78 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=18.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCC--
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-- 220 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v-- 220 (372)
.+.+++++|++ +++++++++++. ++++.|.+++.+.+||+++ .++++|+++.+|+++...... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999986 678999999998 9999999999999999984 568999999999998644211 1121111111
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEEEe
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVVVR 248 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~VVD 248 (372)
..++. .. .+.+..|.+.+.+.. |+|
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEE
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEE
Confidence 12333 33 566788888888875 556
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.69 E-value=0.0054 Score=62.14 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=69.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeeEeeCCCCcEEEEEehhhHhccCCCCCcccccccccCC--
Q 017404 143 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-- 220 (372)
Q Consensus 143 ~~~tV~dIMtpr~~vvtV~~d~tv~~ea~~~m~~~~~sriPV~d~~~d~iVGIVs~kDLl~~~~~~~~~V~dim~r~v-- 220 (372)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|+ .++++|+++.+|+++...... ...+...+-.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2567899999998 9999999999999999984 579999999999997533211 1111101111
Q ss_pred ceecCCCCHHHHHHHHHhcCCcEEEE
Q 017404 221 PRVPETLPLYEILNEFQKGHSHMAVV 246 (372)
Q Consensus 221 ~~V~~~~~l~~aL~~M~~~~~~~a~V 246 (372)
..++......+.++.+.+.+...+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12333344555666777777776543
No 129
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=50.39 E-value=1e+02 Score=28.48 Aligned_cols=40 Identities=23% Similarity=0.402 Sum_probs=23.3
Q ss_pred HHHhhhhchhHHHHHhhHHHHHhHhHHHHHHHHhhhhHHHHH
Q 017404 49 ILLFGEIIPQSVCSRYGLAIGSTVAPFVRVLVWICYPVAFPI 90 (372)
Q Consensus 49 ilvfGEivPK~lA~~~~~~ia~~~a~~l~~~~~l~~Plv~~l 90 (372)
..++++. .|+...+ ..+-+......+..+.+..||+.|.+
T Consensus 177 y~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 177 SALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445554 5654444 33334444455567778889999865
No 130
>1xio_A Anabaena sensory rhodopsin; signaling protein, photoreceptor; HET: RET PEE; 2.00A {Nostoc SP} SCOP: f.13.1.1
Probab=24.94 E-value=2.9e+02 Score=25.11 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=22.8
Q ss_pred HHHHhhhhchhHHHHHhhHH--HHHhHhHHHHHHHHhhhhHHHHHH
Q 017404 48 LILLFGEIIPQSVCSRYGLA--IGSTVAPFVRVLVWICYPVAFPIS 91 (372)
Q Consensus 48 lilvfGEivPK~lA~~~~~~--ia~~~a~~l~~~~~l~~Plv~~l~ 91 (372)
+..++++. .|+. ...+.. -+......+..+.+.+||+.|.++
T Consensus 143 ly~l~~~~-~~~a-~~~~~~v~~~f~~l~~~v~v~W~iYPI~w~l~ 186 (261)
T 1xio_A 143 LWGIWNPL-RAKT-RTQSSELANLYDKLVTYFTVLWIGYPIVWIIG 186 (261)
T ss_dssp HHHHHTHH-HHHH-TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH-HHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33455554 5533 233322 233334555667778899998664
No 131
>2l6x_A GPR, green-light absorbing proteorhodopsin; membrane protein structure, cell-free expre proton transport; HET: LYR; NMR {Uncultured marine gamma PROTEOBACTERIUEBAC31A08}
Probab=24.30 E-value=1.9e+02 Score=26.05 Aligned_cols=19 Identities=21% Similarity=0.653 Sum_probs=13.7
Q ss_pred hHHHHHHHHhhhhHHHHHH
Q 017404 73 APFVRVLVWICYPVAFPIS 91 (372)
Q Consensus 73 a~~l~~~~~l~~Plv~~l~ 91 (372)
...+..+.+..||+.|.++
T Consensus 172 l~~~~~v~W~iYPi~w~l~ 190 (243)
T 2l6x_A 172 MMYIIIFGWAIYPVGYFTG 190 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3445566677899999775
No 132
>3ug9_A Archaeal-type opsin 1, archaeal-type opsin 2; microbialrhodopsin, seven-transmembrane, light-gated cation membrane protein; HET: RET OLA; 2.30A {Chlamydomonas reinhardtii}
Probab=24.10 E-value=4.6e+02 Score=24.80 Aligned_cols=22 Identities=18% Similarity=0.484 Sum_probs=15.1
Q ss_pred HhHhHHHHHHHHhhhhHHHHHH
Q 017404 70 STVAPFVRVLVWICYPVAFPIS 91 (372)
Q Consensus 70 ~~~a~~l~~~~~l~~Plv~~l~ 91 (372)
......+..+.+..||++|.++
T Consensus 228 f~~Lr~~vlV~WaIYPIvW~Lg 249 (333)
T 3ug9_A 228 VTGMAWLFFVSWGMFPILFILG 249 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhHHHeec
Confidence 3344555667788899999774
No 133
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=20.97 E-value=2.5e+02 Score=22.56 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=11.8
Q ss_pred HHHHHHHhhhhchhHHH
Q 017404 45 SVTLILLFGEIIPQSVC 61 (372)
Q Consensus 45 ~t~lilvfGEivPK~lA 61 (372)
.|+..+=+|++.|++.+
T Consensus 53 ~T~tTvGyGDi~P~t~~ 69 (137)
T 4h33_A 53 VTATTVGYGDIVPVTPI 69 (137)
T ss_dssp HHHTTCCCSSSCCCSHH
T ss_pred HHHHcccCCCCCCCCHh
Confidence 34445558999999843
Done!