Query 017405
Match_columns 372
No_of_seqs 333 out of 2328
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 13:53:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 8.3E-18 2.8E-22 134.9 6.2 78 257-362 12-89 (91)
2 1x4j_A Ring finger protein 38; 99.7 1.8E-17 6.3E-22 127.7 2.8 52 312-363 22-73 (75)
3 2ep4_A Ring finger protein 24; 99.6 3.6E-15 1.2E-19 114.2 6.7 57 311-367 13-69 (74)
4 1iym_A EL5; ring-H2 finger, ub 99.5 2E-15 7E-20 109.0 3.3 50 312-361 4-54 (55)
5 2kiz_A E3 ubiquitin-protein li 99.5 6E-15 2.1E-19 111.5 5.9 55 310-364 11-65 (69)
6 2ect_A Ring finger protein 126 99.5 6.8E-15 2.3E-19 113.8 5.1 56 310-365 12-67 (78)
7 2ecl_A Ring-box protein 2; RNF 99.5 1.5E-14 5E-19 113.6 3.2 52 312-363 14-77 (81)
8 2ecm_A Ring finger and CHY zin 99.4 4.5E-14 1.5E-18 101.7 3.6 50 312-361 4-54 (55)
9 1v87_A Deltex protein 2; ring- 99.4 1E-13 3.4E-18 114.8 5.9 54 312-365 24-97 (114)
10 2ea6_A Ring finger protein 4; 99.4 1.1E-13 3.7E-18 103.9 4.6 53 310-362 12-68 (69)
11 3ng2_A RNF4, snurf, ring finge 99.4 7.9E-14 2.7E-18 105.5 3.0 54 311-364 8-65 (71)
12 3dpl_R Ring-box protein 1; ubi 99.4 1.9E-13 6.4E-18 113.0 4.6 50 312-361 36-100 (106)
13 2d8s_A Cellular modulator of i 99.4 2.4E-13 8.2E-18 106.9 4.5 54 310-364 12-72 (80)
14 2xeu_A Ring finger protein 4; 99.4 1.4E-13 4.8E-18 101.8 2.9 52 312-363 2-57 (64)
15 1chc_A Equine herpes virus-1 r 99.3 4.8E-13 1.6E-17 100.5 4.4 50 311-362 3-52 (68)
16 2ecn_A Ring finger protein 141 99.3 4.2E-13 1.4E-17 101.5 3.8 51 311-365 13-63 (70)
17 2d8t_A Dactylidin, ring finger 99.3 4.4E-13 1.5E-17 102.0 3.7 50 311-363 13-62 (71)
18 2djb_A Polycomb group ring fin 99.3 1.4E-12 4.7E-17 99.5 4.9 51 311-364 13-64 (72)
19 2yur_A Retinoblastoma-binding 99.3 2.7E-12 9.4E-17 98.5 5.3 53 311-366 13-68 (74)
20 2ct2_A Tripartite motif protei 99.3 3.5E-12 1.2E-16 100.2 5.6 54 310-363 12-69 (88)
21 2csy_A Zinc finger protein 183 99.3 3E-12 1E-16 99.7 4.9 48 311-361 13-60 (81)
22 2ysl_A Tripartite motif-contai 99.3 3.7E-12 1.3E-16 96.8 5.0 51 310-363 17-70 (73)
23 4a0k_B E3 ubiquitin-protein li 99.2 6.6E-13 2.3E-17 111.6 0.3 50 312-361 47-111 (117)
24 2ecy_A TNF receptor-associated 99.2 4.9E-12 1.7E-16 94.7 4.6 50 311-363 13-63 (66)
25 4ayc_A E3 ubiquitin-protein li 99.2 3.2E-12 1.1E-16 109.7 1.9 48 313-363 53-100 (138)
26 2ysj_A Tripartite motif-contai 99.2 2.2E-11 7.4E-16 90.2 5.8 44 310-356 17-63 (63)
27 4ap4_A E3 ubiquitin ligase RNF 99.2 7.1E-12 2.4E-16 105.2 3.1 54 311-364 5-62 (133)
28 2ecw_A Tripartite motif-contai 99.2 3.3E-11 1.1E-15 93.6 5.6 50 311-363 17-72 (85)
29 2egp_A Tripartite motif-contai 99.1 9.4E-12 3.2E-16 95.9 2.0 50 311-363 10-66 (79)
30 2ecj_A Tripartite motif-contai 99.1 2.8E-11 9.4E-16 87.8 4.3 43 311-356 13-58 (58)
31 1t1h_A Gspef-atpub14, armadill 99.1 1.8E-11 6.3E-16 94.3 3.5 50 311-363 6-56 (78)
32 3lrq_A E3 ubiquitin-protein li 99.1 1E-11 3.6E-16 100.9 1.7 49 312-363 21-71 (100)
33 2ecv_A Tripartite motif-contai 99.1 3.5E-11 1.2E-15 93.4 4.5 50 311-363 17-72 (85)
34 2ct0_A Non-SMC element 1 homol 99.1 4.4E-11 1.5E-15 92.6 4.7 54 309-364 11-66 (74)
35 2y43_A E3 ubiquitin-protein li 99.1 1.8E-11 6.2E-16 98.8 2.2 48 312-362 21-69 (99)
36 4ap4_A E3 ubiquitin ligase RNF 99.1 3.2E-11 1.1E-15 101.2 3.3 55 310-364 69-127 (133)
37 1g25_A CDK-activating kinase a 99.1 4.4E-11 1.5E-15 89.2 3.7 53 312-364 2-57 (65)
38 3ztg_A E3 ubiquitin-protein li 99.1 1E-10 3.4E-15 93.0 5.6 48 311-361 11-61 (92)
39 2ckl_A Polycomb group ring fin 99.1 4.4E-11 1.5E-15 98.1 3.0 49 312-363 14-63 (108)
40 3fl2_A E3 ubiquitin-protein li 99.1 5.1E-11 1.7E-15 100.1 3.0 48 312-362 51-99 (124)
41 1jm7_A BRCA1, breast cancer ty 99.0 1.6E-10 5.4E-15 94.8 3.1 48 313-363 21-71 (112)
42 2ckl_B Ubiquitin ligase protei 99.0 1.9E-10 6.7E-15 101.2 3.4 49 312-362 53-102 (165)
43 3l11_A E3 ubiquitin-protein li 99.0 5.9E-11 2E-15 98.4 0.1 49 311-362 13-62 (115)
44 3hct_A TNF receptor-associated 98.9 2.5E-10 8.4E-15 95.3 3.0 50 311-363 16-66 (118)
45 1rmd_A RAG1; V(D)J recombinati 98.9 2.2E-10 7.6E-15 95.0 1.8 50 312-364 22-72 (116)
46 1z6u_A NP95-like ring finger p 98.9 3E-10 1E-14 99.1 2.7 49 312-363 77-126 (150)
47 1e4u_A Transcriptional repress 98.9 1.5E-09 5.1E-14 84.6 4.2 53 311-364 9-64 (78)
48 2kr4_A Ubiquitin conjugation f 98.8 1.8E-09 6E-14 85.4 4.4 49 311-362 12-60 (85)
49 2vje_A E3 ubiquitin-protein li 98.8 6.9E-10 2.3E-14 83.1 1.7 48 312-362 7-57 (64)
50 1bor_A Transcription factor PM 98.8 5.7E-10 2E-14 81.1 0.7 47 312-364 5-51 (56)
51 1wgm_A Ubiquitin conjugation f 98.8 4.3E-09 1.5E-13 85.5 5.4 49 311-362 20-69 (98)
52 2kre_A Ubiquitin conjugation f 98.8 3.4E-09 1.2E-13 86.3 4.7 49 311-362 27-75 (100)
53 3knv_A TNF receptor-associated 98.8 1.2E-09 4E-14 94.5 1.8 48 311-361 29-77 (141)
54 2y1n_A E3 ubiquitin-protein li 98.8 2.3E-09 7.8E-14 106.7 4.1 49 313-364 332-381 (389)
55 1vyx_A ORF K3, K3RING; zinc-bi 98.8 4.8E-09 1.6E-13 77.8 3.9 47 312-361 5-58 (60)
56 1jm7_B BARD1, BRCA1-associated 98.7 1.2E-09 4.2E-14 90.8 0.4 46 312-362 21-67 (117)
57 2vje_B MDM4 protein; proto-onc 98.7 2.7E-09 9.2E-14 79.6 1.6 47 313-362 7-56 (63)
58 4ic3_A E3 ubiquitin-protein li 98.7 2E-09 6.9E-14 82.6 0.6 44 312-362 23-67 (74)
59 3k1l_B Fancl; UBC, ring, RWD, 98.7 4.1E-09 1.4E-13 102.8 1.3 54 311-364 306-375 (381)
60 2ea5_A Cell growth regulator w 98.6 2.5E-08 8.6E-13 75.5 4.4 49 308-363 10-59 (68)
61 3hcs_A TNF receptor-associated 98.6 1.4E-08 4.7E-13 89.6 2.6 50 311-363 16-66 (170)
62 2c2l_A CHIP, carboxy terminus 98.6 2.5E-08 8.5E-13 93.5 3.5 49 311-362 206-255 (281)
63 2yu4_A E3 SUMO-protein ligase 98.6 1.9E-08 6.6E-13 80.7 2.3 46 311-359 5-59 (94)
64 2ecg_A Baculoviral IAP repeat- 98.5 4.7E-08 1.6E-12 75.0 2.2 44 312-362 24-68 (75)
65 1wim_A KIAA0161 protein; ring 98.4 6.1E-08 2.1E-12 77.4 2.1 51 312-362 4-66 (94)
66 2f42_A STIP1 homology and U-bo 98.4 1E-07 3.5E-12 85.5 2.7 49 311-362 104-153 (179)
67 2yho_A E3 ubiquitin-protein li 98.3 6.2E-08 2.1E-12 75.4 0.1 44 312-362 17-61 (79)
68 2bay_A PRE-mRNA splicing facto 98.2 2.9E-07 9.7E-12 68.3 1.8 48 314-364 4-52 (61)
69 3t6p_A Baculoviral IAP repeat- 98.2 2.8E-07 9.4E-12 90.7 0.6 45 311-362 293-338 (345)
70 3htk_C E3 SUMO-protein ligase 98.1 1.6E-06 5.5E-11 81.9 3.4 50 311-362 179-232 (267)
71 3vk6_A E3 ubiquitin-protein li 97.7 2.1E-05 7E-10 63.7 3.0 48 315-364 3-51 (101)
72 3nw0_A Non-structural maintena 97.5 0.00011 3.8E-09 68.5 5.5 48 312-362 179-229 (238)
73 2ko5_A Ring finger protein Z; 94.4 0.014 4.8E-07 46.5 1.6 47 313-364 28-75 (99)
74 2lri_C Autoimmune regulator; Z 93.5 0.05 1.7E-06 40.5 3.2 47 312-361 11-61 (66)
75 2jun_A Midline-1; B-BOX, TRIM, 93.4 0.038 1.3E-06 43.7 2.6 36 312-347 2-38 (101)
76 2l43_A N-teminal domain from h 89.0 0.13 4.5E-06 40.3 1.4 53 310-362 22-78 (88)
77 2xb1_A Pygopus homolog 2, B-ce 87.4 0.068 2.3E-06 43.4 -1.2 50 314-363 4-65 (105)
78 2l5u_A Chromodomain-helicase-D 87.4 0.24 8.3E-06 36.0 1.8 45 311-359 9-58 (61)
79 1xwh_A Autoimmune regulator; P 85.6 0.17 6E-06 37.3 0.3 50 311-363 6-59 (66)
80 1f62_A Transcription factor WS 84.9 0.3 1E-05 33.9 1.3 44 315-358 2-49 (51)
81 1we9_A PHD finger family prote 83.7 0.27 9.2E-06 35.8 0.6 48 311-358 4-57 (64)
82 2yt5_A Metal-response element- 82.0 0.2 6.8E-06 36.7 -0.8 50 311-360 4-62 (66)
83 2puy_A PHD finger protein 21A; 81.1 0.16 5.6E-06 36.7 -1.5 49 312-363 4-56 (60)
84 1fp0_A KAP-1 corepressor; PHD 80.7 0.61 2.1E-05 36.7 1.6 49 308-359 20-72 (88)
85 3o36_A Transcription intermedi 80.4 0.28 9.6E-06 43.2 -0.5 47 311-360 2-52 (184)
86 3lqh_A Histone-lysine N-methyl 78.7 0.62 2.1E-05 41.4 1.2 47 314-360 3-64 (183)
87 2yql_A PHD finger protein 21A; 78.7 0.24 8.2E-06 35.3 -1.2 45 311-358 7-55 (56)
88 2k16_A Transcription initiatio 78.0 0.47 1.6E-05 35.6 0.1 49 313-362 18-71 (75)
89 1wil_A KIAA1045 protein; ring 76.9 1.8 6E-05 33.8 3.1 32 311-346 13-47 (89)
90 2ku3_A Bromodomain-containing 76.5 0.81 2.8E-05 34.4 1.1 50 310-359 13-66 (71)
91 1mm2_A MI2-beta; PHD, zinc fin 76.1 0.36 1.2E-05 35.1 -0.9 47 312-361 8-58 (61)
92 2ysm_A Myeloid/lymphoid or mix 75.2 0.67 2.3E-05 37.4 0.4 47 311-357 5-55 (111)
93 2e6r_A Jumonji/ARID domain-con 74.7 0.44 1.5E-05 37.6 -0.9 49 310-359 13-66 (92)
94 3m62_A Ubiquitin conjugation f 74.0 1.6 5.5E-05 47.9 3.1 50 310-362 888-938 (968)
95 3u5n_A E3 ubiquitin-protein li 72.1 0.62 2.1E-05 41.8 -0.6 45 312-360 6-55 (207)
96 1wev_A Riken cDNA 1110020M19; 72.0 0.38 1.3E-05 37.6 -1.8 55 311-365 14-78 (88)
97 2e6s_A E3 ubiquitin-protein li 70.3 1.3 4.6E-05 33.7 1.0 43 315-358 28-76 (77)
98 2kgg_A Histone demethylase jar 70.0 1.2 4.2E-05 31.0 0.7 43 315-357 4-52 (52)
99 2vpb_A Hpygo1, pygopus homolog 67.3 3.2 0.00011 30.5 2.5 34 311-344 6-41 (65)
100 1wem_A Death associated transc 66.4 2.7 9.1E-05 31.5 1.9 46 315-360 17-71 (76)
101 3v43_A Histone acetyltransfera 66.1 1.4 4.8E-05 35.7 0.3 44 315-358 63-111 (112)
102 2ri7_A Nucleosome-remodeling f 64.2 1.8 6.2E-05 37.4 0.7 47 312-359 7-59 (174)
103 1weu_A Inhibitor of growth fam 61.6 4.1 0.00014 32.1 2.2 46 312-360 34-86 (91)
104 3asl_A E3 ubiquitin-protein li 60.7 0.83 2.8E-05 34.1 -1.9 43 315-358 20-68 (70)
105 1wew_A DNA-binding family prot 60.3 3.2 0.00011 31.3 1.4 46 314-360 17-73 (78)
106 1wep_A PHF8; structural genomi 60.1 6.2 0.00021 29.8 3.0 47 314-360 12-64 (79)
107 2kwj_A Zinc finger protein DPF 60.0 0.56 1.9E-05 38.3 -3.2 49 315-363 60-112 (114)
108 3v43_A Histone acetyltransfera 58.2 10 0.00035 30.5 4.2 33 313-345 5-43 (112)
109 1wen_A Inhibitor of growth fam 58.1 4.1 0.00014 30.4 1.6 41 314-360 16-66 (71)
110 3ask_A E3 ubiquitin-protein li 57.8 1.9 6.4E-05 39.6 -0.4 43 315-358 176-224 (226)
111 4gne_A Histone-lysine N-methyl 57.0 6 0.0002 32.0 2.5 47 311-363 13-66 (107)
112 3kqi_A GRC5, PHD finger protei 55.0 2.9 0.0001 31.3 0.4 47 313-359 9-61 (75)
113 1wee_A PHD finger family prote 54.0 2.1 7.2E-05 31.8 -0.6 45 314-359 17-66 (72)
114 2lv9_A Histone-lysine N-methyl 51.7 3.9 0.00013 32.3 0.6 43 315-358 30-75 (98)
115 2rsd_A E3 SUMO-protein ligase 51.1 1.4 5E-05 32.4 -1.9 44 314-358 10-64 (68)
116 3shb_A E3 ubiquitin-protein li 49.2 1.6 5.4E-05 33.3 -2.0 44 315-359 28-77 (77)
117 3c6w_A P28ING5, inhibitor of g 48.5 2.7 9.4E-05 30.2 -0.7 42 313-358 8-57 (59)
118 2vnf_A ING 4, P29ING4, inhibit 47.5 2.8 9.5E-05 30.2 -0.8 42 313-358 9-58 (60)
119 3i2d_A E3 SUMO-protein ligase 47.1 11 0.00038 37.0 3.1 47 314-362 250-300 (371)
120 4fo9_A E3 SUMO-protein ligase 45.0 12 0.00042 36.5 3.1 47 314-362 216-266 (360)
121 2kwj_A Zinc finger protein DPF 43.1 13 0.00045 29.9 2.5 34 314-347 2-42 (114)
122 3kv4_A PHD finger protein 8; e 41.3 5.2 0.00018 40.3 -0.2 48 313-360 4-57 (447)
123 2cu8_A Cysteine-rich protein 2 41.0 15 0.00052 26.6 2.4 41 312-362 8-48 (76)
124 3o70_A PHD finger protein 13; 40.3 4.5 0.00015 29.9 -0.7 46 312-358 18-66 (68)
125 2lbm_A Transcriptional regulat 39.8 22 0.00076 30.1 3.5 44 311-358 61-116 (142)
126 2ysm_A Myeloid/lymphoid or mix 37.5 4.9 0.00017 32.1 -0.9 44 315-359 56-104 (111)
127 1fjk_A Cardiac phospholamban; 37.1 22 0.00075 24.3 2.4 14 227-240 32-45 (52)
128 1x62_A C-terminal LIM domain p 36.3 21 0.00073 26.1 2.6 40 312-362 14-53 (79)
129 2g6q_A Inhibitor of growth pro 33.6 6.5 0.00022 28.5 -0.7 42 313-358 10-59 (62)
130 2gmg_A Hypothetical protein PF 33.4 9.6 0.00033 30.8 0.2 24 333-361 72-95 (105)
131 2d8y_A Eplin protein; LIM doma 32.5 49 0.0017 24.8 4.2 41 313-363 15-55 (91)
132 2pk7_A Uncharacterized protein 32.1 13 0.00044 27.7 0.7 20 343-362 1-20 (69)
133 2co8_A NEDD9 interacting prote 31.9 39 0.0013 25.0 3.5 43 312-364 14-56 (82)
134 1iml_A CRIP, cysteine rich int 31.8 13 0.00044 27.1 0.7 43 311-357 25-68 (76)
135 2dj7_A Actin-binding LIM prote 31.4 33 0.0011 25.4 2.9 40 312-361 14-53 (80)
136 2jny_A Uncharacterized BCR; st 31.3 8.9 0.0003 28.4 -0.3 21 343-363 3-23 (67)
137 3ql9_A Transcriptional regulat 29.0 48 0.0017 27.5 3.8 45 311-359 55-111 (129)
138 1x4i_A Inhibitor of growth pro 28.7 12 0.0004 27.8 -0.1 46 314-362 6-58 (70)
139 1weo_A Cellulose synthase, cat 27.7 1.5E+02 0.0051 23.2 6.1 50 312-361 15-69 (93)
140 1x64_A Alpha-actinin-2 associa 25.6 58 0.002 24.3 3.5 41 312-363 24-64 (89)
141 1x4l_A Skeletal muscle LIM-pro 25.5 33 0.0011 24.4 1.9 39 314-361 6-46 (72)
142 2dar_A PDZ and LIM domain prot 25.3 65 0.0022 24.0 3.7 40 312-362 24-63 (90)
143 1a7i_A QCRP2 (LIM1); LIM domai 25.2 12 0.00042 27.5 -0.5 39 314-362 8-46 (81)
144 2d8v_A Zinc finger FYVE domain 24.7 31 0.0011 25.5 1.6 31 311-345 6-37 (67)
145 3mjh_B Early endosome antigen 24.7 5.5 0.00019 25.7 -2.2 14 314-327 6-19 (34)
146 2o35_A Hypothetical protein DU 24.2 30 0.001 27.7 1.5 12 337-348 42-53 (105)
147 3fyb_A Protein of unknown func 23.9 30 0.001 27.6 1.5 12 337-348 41-52 (104)
148 1g47_A Pinch protein; LIM doma 23.8 59 0.002 23.2 3.1 42 313-363 11-52 (77)
149 1zbd_B Rabphilin-3A; G protein 23.7 28 0.00094 29.1 1.4 33 312-344 54-88 (134)
150 3f6q_B LIM and senescent cell 23.6 28 0.00094 24.5 1.2 42 313-363 11-52 (72)
151 2kpi_A Uncharacterized protein 23.4 9 0.00031 27.3 -1.5 19 344-362 4-22 (56)
152 1wyh_A SLIM 2, skeletal muscle 22.8 40 0.0014 23.9 1.9 40 314-362 6-45 (72)
153 1x61_A Thyroid receptor intera 22.8 62 0.0021 22.8 3.0 38 314-360 6-43 (72)
154 2jvx_A NF-kappa-B essential mo 22.7 19 0.00064 22.1 0.1 13 350-362 3-15 (28)
155 2d8x_A Protein pinch; LIM doma 22.6 32 0.0011 24.4 1.4 38 314-362 6-43 (70)
156 2jr6_A UPF0434 protein NMA0874 22.1 10 0.00035 28.1 -1.4 19 344-362 2-20 (68)
157 1vfy_A Phosphatidylinositol-3- 21.4 44 0.0015 24.6 1.9 34 313-346 11-45 (73)
158 1wfk_A Zinc finger, FYVE domai 21.4 41 0.0014 25.8 1.8 53 312-364 8-68 (88)
159 3kv5_D JMJC domain-containing 21.1 26 0.00088 35.6 0.8 48 312-359 35-88 (488)
160 1dvp_A HRS, hepatocyte growth 20.9 34 0.0012 30.5 1.5 34 313-346 161-195 (220)
161 2hf1_A Tetraacyldisaccharide-1 20.4 10 0.00036 28.1 -1.7 19 344-362 2-20 (68)
162 1x63_A Skeletal muscle LIM-pro 20.3 61 0.0021 23.5 2.6 41 314-363 16-56 (82)
163 1x4u_A Zinc finger, FYVE domai 20.3 74 0.0025 23.9 3.1 34 313-346 14-48 (84)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.71 E-value=8.3e-18 Score=134.91 Aligned_cols=78 Identities=35% Similarity=0.691 Sum_probs=67.3
Q ss_pred hccCCCCHHHHhcCCceEeeeccCcccccCCCCCCCCccccccCCCCCcccccCCCCceeeeecccccCCCceEEeCCCC
Q 017405 257 TEREGATEEEIDRLPKFKFSRIDGLEKVNGEIQEPFGGIMIECDTDMPMEHVISEDDAECCICLSAYDDGTELRELPCLH 336 (372)
Q Consensus 257 ~~~~g~s~~~I~~Lp~~k~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~~~~ed~eC~ICL~~y~~~d~lr~LPC~H 336 (372)
....|++++.|++||.+++...... ..++.+|+||++.|.+++.++.|||+|
T Consensus 12 ~~~~~~s~~~i~~lp~~~~~~~~~~----------------------------~~~~~~C~IC~~~~~~~~~~~~l~C~H 63 (91)
T 2l0b_A 12 VANPPASKESIDALPEILVTEDHGA----------------------------VGQEMCCPICCSEYVKGDVATELPCHH 63 (91)
T ss_dssp SCCCCCCHHHHHTSCEEECCTTCSS----------------------------SSSCSEETTTTEECCTTCEEEEETTTE
T ss_pred cCCCCCCHHHHHhCCCeeecccccc----------------------------cCCCCCCcccChhhcCCCcEEecCCCC
Confidence 3468999999999999887654321 134578999999999999999999999
Q ss_pred cccHHHHHHHHhcCCCCccccccccc
Q 017405 337 HFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 337 ~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.||..||++|++.+.+||+||.++..
T Consensus 64 ~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 64 YFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp EEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred hHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 99999999999999999999998864
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.8e-17 Score=127.72 Aligned_cols=52 Identities=38% Similarity=0.973 Sum_probs=48.5
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
++.+|+||+++|++++.++.|||+|.||.+||++|++.+.+||+||+++.+.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 4578999999999999999999999999999999999999999999998764
No 3
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=114.24 Aligned_cols=57 Identities=35% Similarity=0.845 Sum_probs=51.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccCCcC
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMSNER 367 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~~ 367 (372)
.++.+|+||++.|.+++.++.|||+|.||.+||++|++.+.+||+||+++.......
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLS 69 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCSCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccccccC
Confidence 456799999999999999999999999999999999999999999999997765543
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.54 E-value=2e-15 Score=108.99 Aligned_cols=50 Identities=50% Similarity=1.158 Sum_probs=46.7
Q ss_pred CCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
++.+|+||+++|++++.+..+| |+|.||.+||++|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 5578999999999999999998 9999999999999999999999998874
No 5
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.54 E-value=6e-15 Score=111.48 Aligned_cols=55 Identities=40% Similarity=1.067 Sum_probs=49.7
Q ss_pred CCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
..++.+|+||++.|.+++.++.+||+|.||..||.+|++.+.+||+||.++....
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 3456789999999999999999999999999999999999999999999987543
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.52 E-value=6.8e-15 Score=113.83 Aligned_cols=56 Identities=34% Similarity=0.819 Sum_probs=50.6
Q ss_pred CCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccCC
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMSN 365 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 365 (372)
..++.+|+||++.|.+++.++.|||+|.||.+||.+|++.+.+||+||.++.....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNT 67 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCS
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCccc
Confidence 34567999999999999999999999999999999999999999999999876543
No 7
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=113.60 Aligned_cols=52 Identities=29% Similarity=0.663 Sum_probs=42.8
Q ss_pred CCceeeeecccccC-----------CCceEEeC-CCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 312 DDAECCICLSAYDD-----------GTELRELP-CLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~-----------~d~lr~LP-C~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
++++|+||+++|++ ++.++.+| |+|.||.+||++||+.+.+||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 45667777777754 45577776 999999999999999999999999987643
No 8
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.44 E-value=4.5e-14 Score=101.72 Aligned_cols=50 Identities=30% Similarity=0.608 Sum_probs=44.3
Q ss_pred CCceeeeecccccCC-CceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 312 DDAECCICLSAYDDG-TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~-d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
++.+|+||++.|.++ +..+.+||+|.||.+||++|++.+.+||+||.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 457899999999765 45788999999999999999999999999998874
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.43 E-value=1e-13 Score=114.79 Aligned_cols=54 Identities=26% Similarity=0.461 Sum_probs=44.6
Q ss_pred CCceeeeecccccCCC---------------ceEEeCCCCcccHHHHHHHH-----hcCCCCccccccccccCC
Q 017405 312 DDAECCICLSAYDDGT---------------ELRELPCLHHFHCSCLDKWL-----YINSTCPLCKFNILKMSN 365 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d---------------~lr~LPC~H~FH~~CId~WL-----~~~~tCPlCR~~I~~~~~ 365 (372)
.+.+|+||++.|.+++ .++.+||+|.||.+||++|+ +.+.+||+||..+.....
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g 97 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTG 97 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCC
Confidence 4569999999997753 45578999999999999999 457799999998865543
No 10
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-13 Score=103.91 Aligned_cols=53 Identities=28% Similarity=0.593 Sum_probs=46.2
Q ss_pred CCCCceeeeecccccCC----CceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 310 SEDDAECCICLSAYDDG----TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~----d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
..++.+|+||++.|.++ +.+..++|+|.||.+||++|++.+.+||+||.++..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 34678999999999874 455789999999999999999999999999998864
No 11
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.40 E-value=7.9e-14 Score=105.49 Aligned_cols=54 Identities=28% Similarity=0.570 Sum_probs=47.4
Q ss_pred CCCceeeeecccccCC----CceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 311 EDDAECCICLSAYDDG----TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~----d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
.++.+|+||++.|.++ +..+.++|+|.||.+||++|++.+.+||+||.++...+
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 65 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCS
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhh
Confidence 4567999999999764 66788999999999999999999999999999987543
No 12
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.39 E-value=1.9e-13 Score=113.05 Aligned_cols=50 Identities=28% Similarity=0.533 Sum_probs=43.9
Q ss_pred CCceeeeecccccCC---------------CceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 312 DDAECCICLSAYDDG---------------TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~---------------d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
+++.|+||++.|++. ..++.+||+|.||..||++||+.+.+||+||.+..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 567899999999865 14778999999999999999999999999999854
No 13
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.4e-13 Score=106.87 Aligned_cols=54 Identities=31% Similarity=0.767 Sum_probs=46.0
Q ss_pred CCCCceeeeecccccCCCceEEeCCC-----CcccHHHHHHHHhcC--CCCccccccccccC
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCL-----HHFHCSCLDKWLYIN--STCPLCKFNILKMS 364 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~-----H~FH~~CId~WL~~~--~tCPlCR~~I~~~~ 364 (372)
..++.+|.||+++|++++.+ .+||+ |.||.+||++||+.+ .+||+||+++....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 44567999999999988877 59997 999999999999876 48999999886543
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.37 E-value=1.4e-13 Score=101.79 Aligned_cols=52 Identities=29% Similarity=0.570 Sum_probs=45.9
Q ss_pred CCceeeeecccccCC----CceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 312 DDAECCICLSAYDDG----TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~----d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
++.+|+||++.|.++ +.+..++|+|.||.+||++|++.+.+||+||.++...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 457899999999864 5667899999999999999999999999999988764
No 15
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.35 E-value=4.8e-13 Score=100.54 Aligned_cols=50 Identities=38% Similarity=0.850 Sum_probs=44.1
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++.+|+||++.+.++ ...+||+|.||..||.+|++.+.+||+||.++..
T Consensus 3 ~~~~~C~IC~~~~~~~--~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPSNY--SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCCSC--EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCCeeCCccccCC--cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 3567899999998764 4789999999999999999999999999998864
No 16
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=4.2e-13 Score=101.52 Aligned_cols=51 Identities=37% Similarity=0.996 Sum_probs=45.3
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccCC
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMSN 365 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 365 (372)
.++.+|+||++.+.+ ..+||+|.||..||.+|++.+.+||+||.++...+.
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCc
Confidence 456799999999887 689999999999999999999999999999876543
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=4.4e-13 Score=102.00 Aligned_cols=50 Identities=30% Similarity=0.631 Sum_probs=44.8
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
.++.+|+||++.+.+. ..+||+|.||.+||++|++.+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP---VSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSE---EEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCC---EEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 4567899999999876 7789999999999999999999999999988654
No 18
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-12 Score=99.54 Aligned_cols=51 Identities=27% Similarity=0.654 Sum_probs=44.8
Q ss_pred CCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 311 EDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
.++..|+||++.+.++ ..+ +|+|.||..||.+|++.+..||+||.++...+
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 13 TPYILCSICKGYLIDA---TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 64 (72)
T ss_dssp CGGGSCTTTSSCCSSC---EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSC
T ss_pred CCCCCCCCCChHHHCc---CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccc
Confidence 4567899999999886 555 99999999999999999999999999987654
No 19
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.28 E-value=2.7e-12 Score=98.53 Aligned_cols=53 Identities=26% Similarity=0.539 Sum_probs=45.2
Q ss_pred CCCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcC--CCCccccccccccCCc
Q 017405 311 EDDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYIN--STCPLCKFNILKMSNE 366 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~~~ 366 (372)
.++..|+||++.|.++ ..+| |+|.||..||++|++.+ .+||+||.++...+..
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~ 68 (74)
T 2yur_A 13 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDAL 68 (74)
T ss_dssp CGGGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTT
T ss_pred CCCCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcccc
Confidence 4567899999999987 7799 99999999999999876 6899999987655443
No 20
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=3.5e-12 Score=100.23 Aligned_cols=54 Identities=26% Similarity=0.527 Sum_probs=46.5
Q ss_pred CCCCceeeeecccccCCCc-eEEeCCCCcccHHHHHHHHhcC---CCCcccccccccc
Q 017405 310 SEDDAECCICLSAYDDGTE-LRELPCLHHFHCSCLDKWLYIN---STCPLCKFNILKM 363 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~-lr~LPC~H~FH~~CId~WL~~~---~tCPlCR~~I~~~ 363 (372)
..++.+|+||++.|.+++. .+.+||+|.||.+||.+|++.+ .+||+||..+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 3456789999999998764 6789999999999999999876 7899999987654
No 21
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=3e-12 Score=99.70 Aligned_cols=48 Identities=25% Similarity=0.446 Sum_probs=43.3
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
.++.+|+||++.|.++ ..+||+|.||..||.+|++.+.+||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQNP---VVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCSE---EECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcCe---eEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 4567899999999876 57999999999999999999999999999875
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=3.7e-12 Score=96.83 Aligned_cols=51 Identities=27% Similarity=0.546 Sum_probs=43.6
Q ss_pred CCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHh---cCCCCcccccccccc
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLY---INSTCPLCKFNILKM 363 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~---~~~tCPlCR~~I~~~ 363 (372)
..++.+|+||++.|.++ ..+||+|.||.+||.+|++ .+..||+||.++...
T Consensus 17 ~~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 17 LQEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCBCTTTCSBCSSE---EECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred CccCCEeccCCcccCCe---EEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 34568999999999876 6789999999999999997 456899999988654
No 23
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.25 E-value=6.6e-13 Score=111.62 Aligned_cols=50 Identities=28% Similarity=0.536 Sum_probs=1.1
Q ss_pred CCceeeeecccccCC-------------C--ceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 312 DDAECCICLSAYDDG-------------T--ELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~-------------d--~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
+++.|+||+++|++. + .+..+||+|.||..||++||+.+.+||+||.+..
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 467899999999763 2 3334689999999999999999999999999854
No 24
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=4.9e-12 Score=94.69 Aligned_cols=50 Identities=28% Similarity=0.532 Sum_probs=43.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHh-cCCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLY-INSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~ 363 (372)
.++..|+||++.+.++ ..++|+|.||..||.+|++ .+.+||+||.++...
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSP---KQTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCEECTTTCCEESSC---CCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred CcCCCCCCCChHhcCe---eECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 4568999999999987 4479999999999999994 567899999988754
No 25
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.20 E-value=3.2e-12 Score=109.71 Aligned_cols=48 Identities=27% Similarity=0.800 Sum_probs=43.4
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
+..|+||++.|.++ +.+||||.||..||.+|++.+.+||+||.++...
T Consensus 53 ~~~C~iC~~~~~~~---~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 53 ELQCIICSEYFIEA---VTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HSBCTTTCSBCSSE---EEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred cCCCcccCcccCCc---eECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 45799999999876 7899999999999999999999999999988643
No 26
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=2.2e-11 Score=90.22 Aligned_cols=44 Identities=27% Similarity=0.603 Sum_probs=38.7
Q ss_pred CCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHh---cCCCCccc
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLY---INSTCPLC 356 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~---~~~tCPlC 356 (372)
..++.+|+||++.|.++ +.+||+|.||.+||.+|++ .+..||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSC---EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCCe---EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34678999999999987 7789999999999999998 45689998
No 27
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.18 E-value=7.1e-12 Score=105.16 Aligned_cols=54 Identities=28% Similarity=0.570 Sum_probs=47.4
Q ss_pred CCCceeeeecccccCC----CceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 311 EDDAECCICLSAYDDG----TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~----d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
.++.+|+||++.|+++ +..+.++|||.||.+||++|++.+.+||+||..+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcccc
Confidence 4567999999999865 56688999999999999999999999999999887544
No 28
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=3.3e-11 Score=93.55 Aligned_cols=50 Identities=22% Similarity=0.538 Sum_probs=44.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc------CCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI------NSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~ 363 (372)
.++.+|+||++.|.++ ..+||+|.||..||.+|++. +..||+||..+...
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 17 KEEVTCPICLELLKEP---VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp CTTTSCTTTCSCCSSC---EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred ccCCCCcCCChhhCcc---eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 4567999999999887 57999999999999999987 67899999988754
No 29
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.14 E-value=9.4e-12 Score=95.88 Aligned_cols=50 Identities=24% Similarity=0.534 Sum_probs=43.5
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-------CCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-------NSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-------~~tCPlCR~~I~~~ 363 (372)
.++.+|+||++.|.++ +.+||+|.||.+||.+|++. +..||+||..+...
T Consensus 10 ~~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~ 66 (79)
T 2egp_A 10 QEEVTCPICLELLTEP---LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 (79)
T ss_dssp CCCCEETTTTEECSSC---CCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSS
T ss_pred ccCCCCcCCCcccCCe---eECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHh
Confidence 4568999999999887 56899999999999999987 56899999988653
No 30
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=2.8e-11 Score=87.75 Aligned_cols=43 Identities=28% Similarity=0.830 Sum_probs=37.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHH---hcCCCCccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWL---YINSTCPLC 356 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL---~~~~tCPlC 356 (372)
.++..|+||++.|.++ +.+||+|.||.+||.+|+ +.+.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP---VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSC---CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCcc---EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4567999999999987 568999999999999995 456789998
No 31
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.14 E-value=1.8e-11 Score=94.33 Aligned_cols=50 Identities=24% Similarity=0.419 Sum_probs=44.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-CCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~ 363 (372)
.++..|+||++.|.++ ..+||||.||..||.+|++. +.+||+||.++...
T Consensus 6 ~~~~~C~IC~~~~~~P---v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 6 PEYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSC
T ss_pred cccCCCCCccccccCC---EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChh
Confidence 3567899999999987 67899999999999999987 78899999988653
No 32
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.13 E-value=1e-11 Score=100.86 Aligned_cols=49 Identities=27% Similarity=0.648 Sum_probs=43.0
Q ss_pred CCceeeeecccccCCCceEE-eCCCCcccHHHHHHHHhcC-CCCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRE-LPCLHHFHCSCLDKWLYIN-STCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~-LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 363 (372)
++..|+||++.|.++ +. ++|+|.||..||.+|++.+ .+||+||.++...
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 71 (100)
T 3lrq_A 21 EVFRCFICMEKLRDA---RLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLR 71 (100)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred CCCCCccCCccccCc---cccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHH
Confidence 457899999999876 56 8999999999999999987 6999999988643
No 33
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.5e-11 Score=93.43 Aligned_cols=50 Identities=28% Similarity=0.624 Sum_probs=44.1
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc------CCCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI------NSTCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~ 363 (372)
.++.+|+||++.|.+. ..+||+|.||.+||.+|++. +..||+||..+...
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecv_A 17 KEEVTCPICLELLTQP---LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 72 (85)
T ss_dssp CCCCCCTTTCSCCSSC---BCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSS
T ss_pred cCCCCCCCCCcccCCc---eeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHH
Confidence 4568999999999887 56899999999999999987 78899999988754
No 34
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=4.4e-11 Score=92.56 Aligned_cols=54 Identities=24% Similarity=0.460 Sum_probs=44.5
Q ss_pred cCCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcC--CCCccccccccccC
Q 017405 309 ISEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYIN--STCPLCKFNILKMS 364 (372)
Q Consensus 309 ~~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~ 364 (372)
..+...+|+||.+.+..++... .|+|.||..||++||+.+ .+||+||.+.....
T Consensus 11 y~~~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 11 YPDAVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp CSSSSCBCSSSCCBCSSSEECS--SSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCC
T ss_pred ccCCCCcCcchhhHcccCCccC--CCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCC
Confidence 4455689999999999774332 799999999999999987 88999998876443
No 35
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.10 E-value=1.8e-11 Score=98.84 Aligned_cols=48 Identities=25% Similarity=0.695 Sum_probs=42.8
Q ss_pred CCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++..|+||++.|.++ ..+ ||||.||..||.+|++.+.+||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 456899999999886 556 899999999999999999999999998865
No 36
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.09 E-value=3.2e-11 Score=101.15 Aligned_cols=55 Identities=27% Similarity=0.562 Sum_probs=47.3
Q ss_pred CCCCceeeeecccccCC----CceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 310 SEDDAECCICLSAYDDG----TELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~----d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
.+++.+|+||++.|++. .....++|+|.||..||++|++.+.+||+||.++.+++
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 34567899999999863 45578899999999999999999999999999987653
No 37
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.09 E-value=4.4e-11 Score=89.20 Aligned_cols=53 Identities=28% Similarity=0.511 Sum_probs=43.0
Q ss_pred CCceeeeecc-cccCCCc-eEEeCCCCcccHHHHHHHHhc-CCCCccccccccccC
Q 017405 312 DDAECCICLS-AYDDGTE-LRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILKMS 364 (372)
Q Consensus 312 ed~eC~ICL~-~y~~~d~-lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 364 (372)
++..|+||++ .|.++.. ...++|||.||..||++|+.. +..||+||..+...+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccccc
Confidence 3568999999 7877754 346899999999999999765 467999999987543
No 38
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.08 E-value=1e-10 Score=92.96 Aligned_cols=48 Identities=29% Similarity=0.629 Sum_probs=42.4
Q ss_pred CCCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcC--CCCcccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYIN--STCPLCKFNIL 361 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~--~tCPlCR~~I~ 361 (372)
.++..|+||++.|.++ +.+| |||.||..||.+|+..+ .+||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSSC---EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcCc---eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 4668999999999988 7899 99999999999999754 58999999874
No 39
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.07 E-value=4.4e-11 Score=98.12 Aligned_cols=49 Identities=27% Similarity=0.727 Sum_probs=43.3
Q ss_pred CCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
++..|+||++.|.++ ..+ ||||.||..||.+|++.+.+||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDA---TTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSE---EEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCc---CEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 457899999999876 555 9999999999999999999999999988753
No 40
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.05 E-value=5.1e-11 Score=100.12 Aligned_cols=48 Identities=21% Similarity=0.566 Sum_probs=42.4
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC-CCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS-TCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~ 362 (372)
++..|+||++.|.++ ..+||||.||..||.+|+..+. +||+||..+..
T Consensus 51 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRP---ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCc---EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 346899999999987 7789999999999999998554 89999999876
No 41
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.98 E-value=1.6e-10 Score=94.78 Aligned_cols=48 Identities=38% Similarity=0.623 Sum_probs=41.8
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC---CCcccccccccc
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS---TCPLCKFNILKM 363 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~---tCPlCR~~I~~~ 363 (372)
+.+|+||++.|.++ ..+||+|.||..||.+|+..+. +||+||..+...
T Consensus 21 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 71 (112)
T 1jm7_A 21 ILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71 (112)
T ss_dssp HTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTT
T ss_pred CCCCcccChhhcCe---EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHh
Confidence 45899999999887 5589999999999999998754 899999988754
No 42
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.97 E-value=1.9e-10 Score=101.19 Aligned_cols=49 Identities=29% Similarity=0.703 Sum_probs=41.7
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-CCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 362 (372)
++..|+||++.|.++ +..+||+|.||..||++|++. +.+||+||..+..
T Consensus 53 ~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKNT--MTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSSE--EEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhCc--CEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 456899999999975 333499999999999999997 7889999998854
No 43
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.97 E-value=5.9e-11 Score=98.35 Aligned_cols=49 Identities=22% Similarity=0.611 Sum_probs=43.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-CCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 362 (372)
.++..|+||++.|.++ +.+||+|.||..||.+|++. +.+||+||..+..
T Consensus 13 ~~~~~C~iC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEP---VTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSC---EECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCce---eEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 3567899999999987 77899999999999999976 6689999998864
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.95 E-value=2.5e-10 Score=95.27 Aligned_cols=50 Identities=32% Similarity=0.580 Sum_probs=43.7
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC-CCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS-TCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 363 (372)
.++..|+||++.+.++ +.+||+|.||..||.+|++.+. +||+||.++...
T Consensus 16 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 16 ESKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCcCChhhcCe---EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 3457899999999887 6789999999999999998765 999999988753
No 45
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.92 E-value=2.2e-10 Score=94.99 Aligned_cols=50 Identities=28% Similarity=0.622 Sum_probs=43.5
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-CCCCccccccccccC
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILKMS 364 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 364 (372)
++..|+||++.+.++ ..+||||.||..||.+|++. +.+||+||.++...+
T Consensus 22 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 22 KSISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HHTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCcHhcCc---EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 346899999999887 66899999999999999987 778999999887543
No 46
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.92 E-value=3e-10 Score=99.10 Aligned_cols=49 Identities=18% Similarity=0.498 Sum_probs=43.2
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC-CCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS-TCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 363 (372)
++..|+||++.|.++ ..+||+|.||..||.+|+..+. +||+||.++...
T Consensus 77 ~~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQP---VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcCC---EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 346899999999887 6799999999999999998765 899999998765
No 47
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.85 E-value=1.5e-09 Score=84.63 Aligned_cols=53 Identities=21% Similarity=0.407 Sum_probs=41.8
Q ss_pred CCCceeeeecccccCCCceEEe--CCCCcccHHHHHHHHh-cCCCCccccccccccC
Q 017405 311 EDDAECCICLSAYDDGTELREL--PCLHHFHCSCLDKWLY-INSTCPLCKFNILKMS 364 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L--PC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~~ 364 (372)
+++.+|+||++.+...+. ..+ +|||.||..|+.+++. .+..||.||..+....
T Consensus 9 ~~~~~CpICle~~~~~d~-~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDI-NFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCBCTTTCCBCCTTTT-TCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred ccCCcCCccCccCccccc-cccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 466799999999865432 334 4999999999999875 4568999999887654
No 48
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.84 E-value=1.8e-09 Score=85.36 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=45.0
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++..|+||++-|+++ ..+||||.|+..||.+|+..+.+||+|+..+..
T Consensus 12 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDP---VRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred chheECcccCchhcCC---eECCCCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 4568999999999999 889999999999999999999999999998764
No 49
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.84 E-value=6.9e-10 Score=83.09 Aligned_cols=48 Identities=25% Similarity=0.436 Sum_probs=41.0
Q ss_pred CCceeeeecccccCCCceEEe--CCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELREL--PCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~L--PC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++.+|.||++...+. ..+ ||||. |+.+|+++|.+.+..||+||.++..
T Consensus 7 ~~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 57 (64)
T 2vje_A 7 AIEPCVICQGRPKNG---CIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQM 57 (64)
T ss_dssp GGSCCTTTSSSCSCE---EEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCE
T ss_pred CcCCCCcCCCCCCCE---EEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhc
Confidence 456899999987765 444 99999 7999999999999999999998853
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.82 E-value=5.7e-10 Score=81.14 Aligned_cols=47 Identities=26% Similarity=0.552 Sum_probs=40.5
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
++..|+||++.|.++ +.|||+|.||..||.+| +..||+||..+....
T Consensus 5 ~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 5 QFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCS
T ss_pred cCCCceEeCCccCCe---EEcCCCCcccHHHHccC---CCCCCcCCcEeecCC
Confidence 457899999999987 67999999999999884 678999999887543
No 51
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.80 E-value=4.3e-09 Score=85.48 Aligned_cols=49 Identities=18% Similarity=0.088 Sum_probs=45.2
Q ss_pred CCCceeeeecccccCCCceEEeCCC-CcccHHHHHHHHhcCCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCL-HHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~-H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++..|+||++-|+++ +.+||| |.|+..||.+|+..+.+||+||.++..
T Consensus 20 p~~~~CpI~~~~m~dP---V~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cHhcCCcCccccccCC---eECCCCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 5678999999999999 789999 999999999999999999999998864
No 52
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.80 E-value=3.4e-09 Score=86.34 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=45.3
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++..|+||++-|.++ ..+||||.|+..||.+|+..+.+||+|+.++..
T Consensus 27 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDP---VRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBCSSE---EEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcccCC---eECCCCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 5678999999999999 889999999999999999988999999998865
No 53
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.79 E-value=1.2e-09 Score=94.45 Aligned_cols=48 Identities=21% Similarity=0.447 Sum_probs=42.5
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC-CCcccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS-TCPLCKFNIL 361 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~ 361 (372)
+++..|+||++.+.++ ..++|||.||..||.+|++.+. +||+||.++.
T Consensus 29 ~~~~~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 29 EAKYLCSACRNVLRRP---FQAQCGHRYCSFCLASILSSGPQNCAACVHEGI 77 (141)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTC
T ss_pred CcCcCCCCCChhhcCc---EECCCCCccCHHHHHHHHhcCCCCCCCCCCccc
Confidence 4567899999999988 6789999999999999998765 8999999864
No 54
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.79 E-value=2.3e-09 Score=106.75 Aligned_cols=49 Identities=31% Similarity=0.617 Sum_probs=43.2
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHh-cCCCCccccccccccC
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLY-INSTCPLCKFNILKMS 364 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~~ 364 (372)
..+|+||++.+.+. ..+||||.||..||.+|+. .+.+||+||.++....
T Consensus 332 ~~~C~ICle~~~~p---v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 332 FQLCKICAENDKDV---KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSBCTTTSSSBCCE---EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCccCcCCCCe---EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 46899999998765 7899999999999999999 7889999999887643
No 55
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.75 E-value=4.8e-09 Score=77.78 Aligned_cols=47 Identities=36% Similarity=0.710 Sum_probs=37.8
Q ss_pred CCceeeeecccccCCCceEEeCCC--C---cccHHHHHHHHhc--CCCCcccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCL--H---HFHCSCLDKWLYI--NSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~--H---~FH~~CId~WL~~--~~tCPlCR~~I~ 361 (372)
+...|.||+++. ++++ .+||. | .||.+|+++|+.. +.+||+||+++.
T Consensus 5 ~~~~CrIC~~~~--~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEEL--GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEEC--SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCC--CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 457899999983 3445 58965 4 9999999999975 678999998764
No 56
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.74 E-value=1.2e-09 Score=90.84 Aligned_cols=46 Identities=22% Similarity=0.499 Sum_probs=41.0
Q ss_pred CCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++..|+||++.|.++ ..+ ||||.||..||.+|+. ..||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 21 KLLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWI 67 (117)
T ss_dssp HTTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSC
T ss_pred hCCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcc
Confidence 467899999999887 667 9999999999999998 789999998853
No 57
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.72 E-value=2.7e-09 Score=79.56 Aligned_cols=47 Identities=23% Similarity=0.457 Sum_probs=40.4
Q ss_pred CceeeeecccccCCCceEEe--CCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 313 DAECCICLSAYDDGTELREL--PCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L--PC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
+.+|.||++...+. ..+ ||||. |+.+|+.+|.+.+..||+||.+|..
T Consensus 7 ~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 56 (63)
T 2vje_B 7 LKPCSLCEKRPRDG---NIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 56 (63)
T ss_dssp GSBCTTTSSSBSCE---EEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCE
T ss_pred CCCCcccCCcCCCe---EEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhc
Confidence 46899999987665 344 99998 9999999999988999999998853
No 58
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.71 E-value=2e-09 Score=82.64 Aligned_cols=44 Identities=25% Similarity=0.490 Sum_probs=38.7
Q ss_pred CCceeeeecccccCCCceEEeCCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++..|+||++.+.+. ..+||+|. ||..|+.+| ..||+||.++..
T Consensus 23 ~~~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCE---EEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCE---EEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 456899999988775 78899999 999999999 789999998864
No 59
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.66 E-value=4.1e-09 Score=102.83 Aligned_cols=54 Identities=28% Similarity=0.725 Sum_probs=42.9
Q ss_pred CCCceeeeecccccCCCceE-----EeCCCCcccHHHHHHHHhcC-----------CCCccccccccccC
Q 017405 311 EDDAECCICLSAYDDGTELR-----ELPCLHHFHCSCLDKWLYIN-----------STCPLCKFNILKMS 364 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr-----~LPC~H~FH~~CId~WL~~~-----------~tCPlCR~~I~~~~ 364 (372)
....+|+||++.+.++.++- ..+|+|.||..||.+||+.. .+||.||++|..+.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf 375 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSF 375 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCccH
Confidence 35679999999999854442 34699999999999999752 46999999987654
No 60
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=2.5e-08 Score=75.51 Aligned_cols=49 Identities=22% Similarity=0.577 Sum_probs=40.2
Q ss_pred ccCCCCceeeeecccccCCCceEEeCCCCc-ccHHHHHHHHhcCCCCcccccccccc
Q 017405 308 VISEDDAECCICLSAYDDGTELRELPCLHH-FHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 308 ~~~~ed~eC~ICL~~y~~~d~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
....++.+|.||++...+. ..+||+|. |+..|+.. ...||+||.+|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~~---v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGTVNW---VLLPCRHTCLCDGCVKY----FQQCPMCRQFVQES 59 (68)
T ss_dssp CSCCCSSCCSSSSSSCCCC---EETTTTBCCSCTTHHHH----CSSCTTTCCCCCCE
T ss_pred ccCCCCCCCCCcCcCCCCE---EEECCCChhhhHHHHhc----CCCCCCCCcchhce
Confidence 3445678999999987664 78999999 99999984 57899999988653
No 61
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.59 E-value=1.4e-08 Score=89.63 Aligned_cols=50 Identities=32% Similarity=0.576 Sum_probs=43.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcC-CCCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYIN-STCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 363 (372)
.++..|+||++.+.++ +.++|||.|+..||.+|++.+ .+||+||.++...
T Consensus 16 ~~~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 16 ESKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCChhhcCc---EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 3557899999999987 678999999999999999865 4899999988654
No 62
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.56 E-value=2.5e-08 Score=93.46 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=43.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcC-CCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYIN-STCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~ 362 (372)
.++..|+||++.|.++ +.+||||.|+..||.+|+..+ .+||+||.++..
T Consensus 206 ~~~~~c~i~~~~~~dP---v~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 206 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp CSTTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CcccCCcCcCCHhcCC---eECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 4567899999999999 889999999999999999864 459999998864
No 63
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=1.9e-08 Score=80.69 Aligned_cols=46 Identities=15% Similarity=0.352 Sum_probs=39.8
Q ss_pred CCCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcC------CCCcc--cccc
Q 017405 311 EDDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYIN------STCPL--CKFN 359 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~------~tCPl--CR~~ 359 (372)
.++..|+||++.|+++ +.+| |||.|+..||.+|+..+ .+||+ |+..
T Consensus 5 ~~~~~CPI~~~~~~dP---V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKP---VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSSE---EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcCC---EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3457899999999998 7886 99999999999999864 48999 9855
No 64
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=4.7e-08 Score=74.99 Aligned_cols=44 Identities=25% Similarity=0.493 Sum_probs=37.3
Q ss_pred CCceeeeecccccCCCceEEeCCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++.+|+||++.+.+. ..+||+|. |+.+|+.+ ...||+||.++..
T Consensus 24 ~~~~C~IC~~~~~~~---~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCB---CCSSSCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCE---EEecCCCHHHHHHHhhC----CCCCccCCceecC
Confidence 456899999998775 67899999 99999965 4789999998865
No 65
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.42 E-value=6.1e-08 Score=77.42 Aligned_cols=51 Identities=22% Similarity=0.539 Sum_probs=41.2
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc--------CCCCcc--cccc--ccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI--------NSTCPL--CKFN--ILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~--------~~tCPl--CR~~--I~~ 362 (372)
+..+|+||++++.+++.+...+|+|.|+.+|+.+++.. ...||. |+.. +.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~ 66 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 66 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCH
Confidence 34689999999988766665689999999999999863 236999 9987 543
No 66
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.38 E-value=1e-07 Score=85.53 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=43.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcC-CCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYIN-STCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~ 362 (372)
++...|+||++-|.++ ..+||||.|+..||.+|+..+ .+||+|+.++..
T Consensus 104 p~~f~CPI~~elm~DP---V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cHhhcccCccccCCCC---eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 4567899999999998 788999999999999999874 479999988764
No 67
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.34 E-value=6.2e-08 Score=75.43 Aligned_cols=44 Identities=23% Similarity=0.582 Sum_probs=37.4
Q ss_pred CCceeeeecccccCCCceEEeCCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
++..|.||++.+.+. ..+||||. |+.+|+.+| ..||+||.++..
T Consensus 17 ~~~~C~IC~~~~~~~---v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINS---TFCPCGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCE---EEETTCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcE---EEECCCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 346899999987765 78999999 999999987 389999998864
No 68
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.24 E-value=2.9e-07 Score=68.30 Aligned_cols=48 Identities=13% Similarity=0.040 Sum_probs=42.7
Q ss_pred ceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 314 AECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
..|+||++.++++ ..+ +|||.|.+.||.+|++.+.+||+++.++...+
T Consensus 4 ~~CpIs~~~m~dP---V~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~ 52 (61)
T 2bay_A 4 MLCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEE 52 (61)
T ss_dssp CCCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGG
T ss_pred EEecCCCCCCCCC---EEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhh
Confidence 4799999999987 677 89999999999999998889999999886543
No 69
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.17 E-value=2.8e-07 Score=90.72 Aligned_cols=45 Identities=22% Similarity=0.551 Sum_probs=39.6
Q ss_pred CCCceeeeecccccCCCceEEeCCCCc-ccHHHHHHHHhcCCCCccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHH-FHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++..|+||++.+.+. ..+||||. ||..|+.+| ..||+||.++..
T Consensus 293 ~~~~~C~IC~~~~~~~---v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSV---VFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCCE---EEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCce---EEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 3567999999998876 78899999 999999998 689999998864
No 70
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.06 E-value=1.6e-06 Score=81.92 Aligned_cols=50 Identities=22% Similarity=0.415 Sum_probs=41.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcC--CCCcc--ccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYIN--STCPL--CKFNILK 362 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~--~tCPl--CR~~I~~ 362 (372)
..+..|+||++.|.++ |+...|||.|++.||.+|+..+ .+||+ |+..+..
T Consensus 179 ~~el~CPIcl~~f~DP--Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPYEAP--LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBCSSE--EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCcccCC--eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 3567899999999888 3335899999999999999864 46999 9987754
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.66 E-value=2.1e-05 Score=63.70 Aligned_cols=48 Identities=23% Similarity=0.388 Sum_probs=38.4
Q ss_pred eeeeecccccCCCceEEeCCCCcccHHHHHHHHhc-CCCCccccccccccC
Q 017405 315 ECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI-NSTCPLCKFNILKMS 364 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 364 (372)
-|.+|--.+.. ..|.+||+|+|+.+|+..|.+. .++||.|+.+|..-+
T Consensus 3 fC~~C~~Pi~i--ygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe 51 (101)
T 3vk6_A 3 FCDKCGLPIKV--YGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIE 51 (101)
T ss_dssp BCTTTCSBCSE--EEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEE
T ss_pred ecCccCCCeEE--EeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeE
Confidence 36677666553 4689999999999999999865 688999999886543
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.46 E-value=0.00011 Score=68.52 Aligned_cols=48 Identities=27% Similarity=0.535 Sum_probs=39.9
Q ss_pred CCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcCC--CCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYINS--TCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~~--tCPlCR~~I~~ 362 (372)
...+|.||.+-...| ..-+ |+|.||..|+++|++.+. .||.|+.+.+.
T Consensus 179 ~i~~C~iC~~iv~~g---~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 179 AVKICNICHSLLIQG---QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp TCCBCTTTCSBCSSC---EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CCCcCcchhhHHhCC---cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 467899999999887 3334 999999999999998754 89999987654
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=94.37 E-value=0.014 Score=46.54 Aligned_cols=47 Identities=23% Similarity=0.526 Sum_probs=38.5
Q ss_pred CceeeeecccccCCCceEEeCCC-CcccHHHHHHHHhcCCCCccccccccccC
Q 017405 313 DAECCICLSAYDDGTELRELPCL-HHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
...|..|+...+. ...|+ |.++..|+..-|..+..||+|+++++.+=
T Consensus 28 ~~nCKsCWf~~k~-----LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl 75 (99)
T 2ko5_A 28 PQFCKSCWFENKG-----LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKL 75 (99)
T ss_dssp CCCCCSSCSCCSS-----EEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCS
T ss_pred cccChhhccccCC-----eeeecchhhHHHHHHHHHhhccCCcccCCcCCcce
Confidence 4579999987542 34565 99999999999999999999999987643
No 74
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=93.50 E-value=0.05 Score=40.55 Aligned_cols=47 Identities=23% Similarity=0.395 Sum_probs=33.1
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I~ 361 (372)
.+..|.||.+ .++-|.-=.|...||..|++..|.... .||.|+.+-.
T Consensus 11 ~~~~C~vC~~---~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~ 61 (66)
T 2lri_C 11 PGARCGVCGD---GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVT 61 (66)
T ss_dssp TTCCCTTTSC---CTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCC
T ss_pred CCCCcCCCCC---CCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCCc
Confidence 4568999974 233332223889999999999887543 5999986543
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=93.39 E-value=0.038 Score=43.74 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=28.7
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHH-HH
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDK-WL 347 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~-WL 347 (372)
++..|.||+++|..+....-++|+|.|+..|+.. |-
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 4578999998865554555599999999999998 54
No 76
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=88.98 E-value=0.13 Score=40.34 Aligned_cols=53 Identities=19% Similarity=0.357 Sum_probs=34.2
Q ss_pred CCCCceeeeecccc-cCCCceEEeC-CCCcccHHHHHHHHhc--CCCCccccccccc
Q 017405 310 SEDDAECCICLSAY-DDGTELRELP-CLHHFHCSCLDKWLYI--NSTCPLCKFNILK 362 (372)
Q Consensus 310 ~~ed~eC~ICL~~y-~~~d~lr~LP-C~H~FH~~CId~WL~~--~~tCPlCR~~I~~ 362 (372)
..++..|.||...- .+++++..-. |.-.||..|+..=+.- .=.||.|......
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTS
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccch
Confidence 45678999999764 2333343333 8889999999853211 1249999765443
No 77
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=87.42 E-value=0.068 Score=43.38 Aligned_cols=50 Identities=22% Similarity=0.336 Sum_probs=35.0
Q ss_pred ceeeeecccccCCCceEEe--CCCCcccHHHHHHHH----h------cCCCCcccccccccc
Q 017405 314 AECCICLSAYDDGTELREL--PCLHHFHCSCLDKWL----Y------INSTCPLCKFNILKM 363 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~L--PC~H~FH~~CId~WL----~------~~~tCPlCR~~I~~~ 363 (372)
..|.||...|.++.+.+.- .|..=||.+|+.-=- . .+-.||.|+..-...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~ 65 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGS 65 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCC
Confidence 4799999999877665554 388899999985321 0 234599998654433
No 78
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=87.38 E-value=0.24 Score=36.01 Aligned_cols=45 Identities=27% Similarity=0.634 Sum_probs=31.0
Q ss_pred CCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcC----CCCcccccc
Q 017405 311 EDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYIN----STCPLCKFN 359 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~----~tCPlCR~~ 359 (372)
.++..|.+|... + ++..- .|...||..|++.=+... -.||.|+.+
T Consensus 9 ~~~~~C~vC~~~---g-~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 9 DHQDYCEVCQQG---G-EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCCSSCTTTSCC---S-SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCccCCCC---C-cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 456789999873 3 33322 388999999999865432 249999753
No 79
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=85.63 E-value=0.17 Score=37.32 Aligned_cols=50 Identities=24% Similarity=0.510 Sum_probs=33.0
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I~~~ 363 (372)
.++..|.||-.. ++-+.-=-|...||..|++.=+.... .||.|...-...
T Consensus 6 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 6 KNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp SCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 356789999863 33332223889999999986554322 499997654433
No 80
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=84.92 E-value=0.3 Score=33.88 Aligned_cols=44 Identities=30% Similarity=0.588 Sum_probs=28.8
Q ss_pred eeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCccccc
Q 017405 315 ECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~ 358 (372)
.|.||...-+.++-+.--.|...||..|++.=+.... .||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 5888887644443333334889999999976444322 4999964
No 81
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=83.71 E-value=0.27 Score=35.80 Aligned_cols=48 Identities=21% Similarity=0.394 Sum_probs=33.9
Q ss_pred CCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHh-----cCCCCccccc
Q 017405 311 EDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLY-----INSTCPLCKF 358 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~ 358 (372)
.++..|+||...|.++...+.- .|..=||..|+.---. ..-.||.|+.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 3556799999999765544443 3888999999875432 2456999965
No 82
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=82.02 E-value=0.2 Score=36.74 Aligned_cols=50 Identities=22% Similarity=0.496 Sum_probs=33.4
Q ss_pred CCCceeeeecccccC-CCceEEeC-CCCcccHHHHHHHHhc-------CCCCccccccc
Q 017405 311 EDDAECCICLSAYDD-GTELRELP-CLHHFHCSCLDKWLYI-------NSTCPLCKFNI 360 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~-~d~lr~LP-C~H~FH~~CId~WL~~-------~~tCPlCR~~I 360 (372)
.++..|.||...... ++.+..-. |...||..|++.=+.. .=.||.|+...
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 456789999987643 23333333 8899999998864421 22499997543
No 83
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=81.06 E-value=0.16 Score=36.68 Aligned_cols=49 Identities=31% Similarity=0.604 Sum_probs=33.2
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I~~~ 363 (372)
++..|.+|... ++-+.-=-|...||..|++.=+.... .||.|.....++
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~~ 56 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 56 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHHHT
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhhch
Confidence 45789999874 33332223889999999996554322 499998766543
No 84
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=80.73 E-value=0.61 Score=36.66 Aligned_cols=49 Identities=22% Similarity=0.467 Sum_probs=33.6
Q ss_pred ccCCCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccc
Q 017405 308 VISEDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFN 359 (372)
Q Consensus 308 ~~~~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~ 359 (372)
....++..|.+|... ++-+.--.|.-.||..|+++=+.... .||.|+..
T Consensus 20 ~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 20 TLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred ccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 345567889999964 43333223778999999987665422 49999754
No 85
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=80.39 E-value=0.28 Score=43.23 Aligned_cols=47 Identities=26% Similarity=0.454 Sum_probs=31.7
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNI 360 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I 360 (372)
.+++.|.+|... |+-+.-=.|...||..|++.-+.... .||.|+..-
T Consensus 2 ~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 356789999853 43222223889999999987765432 499998643
No 86
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=78.75 E-value=0.62 Score=41.44 Aligned_cols=47 Identities=26% Similarity=0.472 Sum_probs=34.1
Q ss_pred ceeeeecccccCCCc---eEEeC-CCCcccHHHHHHH------Hh-----cCCCCccccccc
Q 017405 314 AECCICLSAYDDGTE---LRELP-CLHHFHCSCLDKW------LY-----INSTCPLCKFNI 360 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~---lr~LP-C~H~FH~~CId~W------L~-----~~~tCPlCR~~I 360 (372)
..|+||...|.+++. .+.-. |..=||..|+.-= +. ..-.||.|+..-
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 469999999998863 44444 8899999998531 11 156799998654
No 87
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.73 E-value=0.24 Score=35.29 Aligned_cols=45 Identities=29% Similarity=0.585 Sum_probs=30.4
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKF 358 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~ 358 (372)
.++..|.+|... ++-+.---|...||..|++.=+.... .||.|+.
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 356789999874 33333233889999999997554322 3998864
No 88
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=78.00 E-value=0.47 Score=35.64 Aligned_cols=49 Identities=24% Similarity=0.393 Sum_probs=33.1
Q ss_pred CceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhc----CCCCccccccccc
Q 017405 313 DAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYI----NSTCPLCKFNILK 362 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 362 (372)
+..|.||..... ++.+..- -|..-||..|+..-... .-.||.|+..+.+
T Consensus 18 ~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k 71 (75)
T 2k16_A 18 IWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKK 71 (75)
T ss_dssp EECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCS
T ss_pred CcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhh
Confidence 346999988864 3333332 38899999999765432 3359999877654
No 89
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=76.89 E-value=1.8 Score=33.82 Aligned_cols=32 Identities=28% Similarity=0.722 Sum_probs=23.9
Q ss_pred CCCceeeeecccccCCCceEEeC---CCCcccHHHHHHH
Q 017405 311 EDDAECCICLSAYDDGTELRELP---CLHHFHCSCLDKW 346 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LP---C~H~FH~~CId~W 346 (372)
..|..|.||-. +..++ .+| |+-+||..|+.+-
T Consensus 13 ~~D~~C~VC~~-~t~~~---l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVCEV-WTAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTTCC-CCSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CCCcccCcccc-ccccc---eeccccccccccHhhcccc
Confidence 36789999863 33442 456 7899999999996
No 90
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=76.51 E-value=0.81 Score=34.36 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=32.4
Q ss_pred CCCCceeeeecccc-cCCCceEEeC-CCCcccHHHHHHHHhc--CCCCcccccc
Q 017405 310 SEDDAECCICLSAY-DDGTELRELP-CLHHFHCSCLDKWLYI--NSTCPLCKFN 359 (372)
Q Consensus 310 ~~ed~eC~ICL~~y-~~~d~lr~LP-C~H~FH~~CId~WL~~--~~tCPlCR~~ 359 (372)
..++..|.||.+.- .+++++..-. |.-.||..|+..=..- .=.||.|+..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 34567899998764 3334444333 8899999999753211 1249999653
No 91
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=76.14 E-value=0.36 Score=35.05 Aligned_cols=47 Identities=28% Similarity=0.498 Sum_probs=30.8
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I~ 361 (372)
++..|.+|-.. ++-+.-=.|...||..|++.=+.... .||.|+....
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 8 HMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred CCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 45679999752 33222223889999999986554322 4999976543
No 92
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=75.23 E-value=0.67 Score=37.38 Aligned_cols=47 Identities=32% Similarity=0.566 Sum_probs=31.3
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhc----CCCCcccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI----NSTCPLCK 357 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR 357 (372)
.+++.|.||.+.=+.++-+.--.|...||..|++..+.. .-.||.|+
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 356889999887333222433458899999999987642 22366664
No 93
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.72 E-value=0.44 Score=37.61 Aligned_cols=49 Identities=27% Similarity=0.432 Sum_probs=32.8
Q ss_pred CCCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcCC----CCcccccc
Q 017405 310 SEDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYINS----TCPLCKFN 359 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~~----tCPlCR~~ 359 (372)
..++..|.||...-..+ .+..- -|...||..|++.=|.... .||.|+..
T Consensus 13 ~~~~~~C~vC~~~~~~~-~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDD-KLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGG-GCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCC-CEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34567899999875433 33333 3889999999985443322 39999764
No 94
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=74.04 E-value=1.6 Score=47.88 Aligned_cols=50 Identities=18% Similarity=0.165 Sum_probs=43.9
Q ss_pred CCCCceeeeecccccCCCceEEeCCC-CcccHHHHHHHHhcCCCCccccccccc
Q 017405 310 SEDDAECCICLSAYDDGTELRELPCL-HHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 310 ~~ed~eC~ICL~~y~~~d~lr~LPC~-H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
.++...|+|-++-+.|+ ..+|-| +.|-..+|.+||..+.+||.=|.++..
T Consensus 888 iP~~F~cPIs~~lM~DP---VilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 888 VPDEFLDPLMYTIMKDP---VILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp SCGGGBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CcHHhCCcchhhHHhCC---eEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCc
Confidence 34566799999999999 889997 589999999999999999998887764
No 95
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=72.05 E-value=0.62 Score=41.82 Aligned_cols=45 Identities=24% Similarity=0.527 Sum_probs=30.6
Q ss_pred CCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcCC----CCccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYINS----TCPLCKFNI 360 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~~----tCPlCR~~I 360 (372)
++..|.+|... | ++..-. |...||..|++.-+.... .||.|+..-
T Consensus 6 ~~~~C~~C~~~---g-~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNG---G-DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCC---E-EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC---C-ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 45679999743 3 232222 779999999987765432 499997643
No 96
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=72.03 E-value=0.38 Score=37.60 Aligned_cols=55 Identities=20% Similarity=0.400 Sum_probs=36.8
Q ss_pred CCCceeeeecccccCC-CceEEeC-CCCcccHHHHHHHHhc--------CCCCccccccccccCC
Q 017405 311 EDDAECCICLSAYDDG-TELRELP-CLHHFHCSCLDKWLYI--------NSTCPLCKFNILKMSN 365 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~-d~lr~LP-C~H~FH~~CId~WL~~--------~~tCPlCR~~I~~~~~ 365 (372)
+++..|.+|...-..+ +.+..-- |...||..|++.=|.. .=.||.|+........
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~~~ 78 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQ 78 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCSTT
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhhcc
Confidence 3567899999875432 3343333 8899999999876541 2249999876655443
No 97
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.25 E-value=1.3 Score=33.67 Aligned_cols=43 Identities=26% Similarity=0.438 Sum_probs=27.8
Q ss_pred eeeeecccccCCCceEEe-CCCCcccHHHHHHHHhc-----CCCCccccc
Q 017405 315 ECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYI-----NSTCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~-----~~tCPlCR~ 358 (372)
.|.||...=. ++++..- -|...||..|++.=|.. .=.||.|..
T Consensus 28 ~C~vC~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHE-PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCC-STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCC-CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 7888887533 3334333 38899999999854432 124999964
No 98
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=69.96 E-value=1.2 Score=31.05 Aligned_cols=43 Identities=19% Similarity=0.334 Sum_probs=29.7
Q ss_pred eeeeecccccCCCceEEe--CCCCcccHHHHHHHH----hcCCCCcccc
Q 017405 315 ECCICLSAYDDGTELREL--PCLHHFHCSCLDKWL----YINSTCPLCK 357 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~L--PC~H~FH~~CId~WL----~~~~tCPlCR 357 (372)
.|++|...|.+++..+.- .|..=||..|+.--- ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 588999999766554443 377789999976322 2456799885
No 99
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=67.31 E-value=3.2 Score=30.49 Aligned_cols=34 Identities=24% Similarity=0.502 Sum_probs=25.5
Q ss_pred CCCceeeeecccccCCCceEEe--CCCCcccHHHHH
Q 017405 311 EDDAECCICLSAYDDGTELREL--PCLHHFHCSCLD 344 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L--PC~H~FH~~CId 344 (372)
+....|++|...|.+++..+.- .|.-=||..|+.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 3456899999999887655554 588999999985
No 100
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=66.37 E-value=2.7 Score=31.52 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=30.1
Q ss_pred eeeeecccccCCCceEEeCCCCcccHHHHHHHH---------hcCCCCccccccc
Q 017405 315 ECCICLSAYDDGTELRELPCLHHFHCSCLDKWL---------YINSTCPLCKFNI 360 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL---------~~~~tCPlCR~~I 360 (372)
.-+||...+.++.-|.---|..=||..|+.--- ..+-.||.|+..-
T Consensus 17 ~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 17 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCSTTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CEEECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 444999988754333323488999999985321 2456799997543
No 101
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=66.11 E-value=1.4 Score=35.70 Aligned_cols=44 Identities=23% Similarity=0.456 Sum_probs=29.0
Q ss_pred eeeeecccccCCCceEEeC-CCCcccHHHHHHHHhcC----CCCccccc
Q 017405 315 ECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYIN----STCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~~----~tCPlCR~ 358 (372)
.|.||...-++++.+..-. |...||..|++.=|... =.||.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 6788886533333443333 88999999998755432 24999974
No 102
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=64.15 E-value=1.8 Score=37.41 Aligned_cols=47 Identities=21% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCceeeeecccccCCCceEEeC-CCCcccHHHHHHHH-----hcCCCCcccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWL-----YINSTCPLCKFN 359 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL-----~~~~tCPlCR~~ 359 (372)
++.-| +|...++++.....-. |..-||..|+.--- ...-.||.|+..
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 34567 9999887554444433 88999999995321 124469999753
No 103
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=61.57 E-value=4.1 Score=32.07 Aligned_cols=46 Identities=24% Similarity=0.580 Sum_probs=26.9
Q ss_pred CCceeeeecccccCCCceEEeC--CC-CcccHHHHHHHHhc----CCCCccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP--CL-HHFHCSCLDKWLYI----NSTCPLCKFNI 360 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP--C~-H~FH~~CId~WL~~----~~tCPlCR~~I 360 (372)
++...+||..... ++-|.-=. |. .-||..|+. |.. +-.||.|+..-
T Consensus 34 ~e~~yCiC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCBCSTTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCCcEEECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 3444559988753 42221111 33 469999997 433 23599997643
No 104
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=60.72 E-value=0.83 Score=34.15 Aligned_cols=43 Identities=30% Similarity=0.527 Sum_probs=26.4
Q ss_pred eeeeecccccCCCceEEeC-CCCcccHHHHHHHHhc-----CCCCccccc
Q 017405 315 ECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLYI-----NSTCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~~-----~~tCPlCR~ 358 (372)
.|.||...- +++++..-. |...||..|++.=|.. .=.||.|+.
T Consensus 20 ~C~~C~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcC-CCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 466776542 233333333 7899999999954432 224999974
No 105
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=60.27 E-value=3.2 Score=31.34 Aligned_cols=46 Identities=15% Similarity=0.379 Sum_probs=29.0
Q ss_pred ceeeeecccccCCCceEEe--CCCCcccHHHHHHHH---------hcCCCCccccccc
Q 017405 314 AECCICLSAYDDGTELREL--PCLHHFHCSCLDKWL---------YINSTCPLCKFNI 360 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~L--PC~H~FH~~CId~WL---------~~~~tCPlCR~~I 360 (372)
..| ||-....++.-|--= -|..=||..|+.-=- ..+-.||.|+..-
T Consensus 17 ~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 17 VRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred EEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 445 898885555323222 488899999985321 1244699997643
No 106
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=60.14 E-value=6.2 Score=29.75 Aligned_cols=47 Identities=26% Similarity=0.463 Sum_probs=30.8
Q ss_pred ceeeeecccccCCCceEEe-CCCCcccHHHHHHHHh-----cCCCCccccccc
Q 017405 314 AECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLY-----INSTCPLCKFNI 360 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~I 360 (372)
..-+||...++++...+.- -|..=||..|+.-=-. ..-.||.|+..-
T Consensus 12 ~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3445999998754444333 3889999999963221 234699998643
No 107
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=60.04 E-value=0.56 Score=38.30 Aligned_cols=49 Identities=22% Similarity=0.400 Sum_probs=30.6
Q ss_pred eeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCC----CCcccccccccc
Q 017405 315 ECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINS----TCPLCKFNILKM 363 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~----tCPlCR~~I~~~ 363 (372)
.|.||...-.+++-+.-=.|...||..|++.=|.... .||.|+....++
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~k 112 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEK 112 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHHHT
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchhhcc
Confidence 5777777543333222223889999999996444322 399997765543
No 108
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=58.15 E-value=10 Score=30.47 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=22.7
Q ss_pred Cceeeeeccccc-----CCCceEE-eCCCCcccHHHHHH
Q 017405 313 DAECCICLSAYD-----DGTELRE-LPCLHHFHCSCLDK 345 (372)
Q Consensus 313 d~eC~ICL~~y~-----~~d~lr~-LPC~H~FH~~CId~ 345 (372)
...|.+|+..-. +++++.. -.|+..||..|++.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~ 43 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKF 43 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcC
Confidence 467999987631 2334443 34999999999963
No 109
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=58.08 E-value=4.1 Score=30.40 Aligned_cols=41 Identities=27% Similarity=0.670 Sum_probs=25.6
Q ss_pred ceeeeecccccCCCceEEeC-----CC-CcccHHHHHHHHhcC----CCCccccccc
Q 017405 314 AECCICLSAYDDGTELRELP-----CL-HHFHCSCLDKWLYIN----STCPLCKFNI 360 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LP-----C~-H~FH~~CId~WL~~~----~tCPlCR~~I 360 (372)
...+||-.... ++ .+- |. .-||..|+. |... -.||.|+..-
T Consensus 16 ~~~C~C~~~~~-g~---MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 16 PTYCLCHQVSY-GE---MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCSTTCCCSC-SS---EECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCEEECCCCCC-CC---EeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 33448988653 42 333 44 579999997 4432 2499997643
No 110
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=57.77 E-value=1.9 Score=39.64 Aligned_cols=43 Identities=30% Similarity=0.512 Sum_probs=24.9
Q ss_pred eeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcC-----CCCccccc
Q 017405 315 ECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYIN-----STCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~-----~tCPlCR~ 358 (372)
.|.+|...=..+ .+..- -|...||..|+++=|... =.||.|+.
T Consensus 176 ~C~vC~~~~~~~-~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 176 ACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp SCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCcCCCCCCCCC-CeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 688887753333 33322 388999999999654421 24999965
No 111
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=56.98 E-value=6 Score=32.00 Aligned_cols=47 Identities=26% Similarity=0.495 Sum_probs=30.1
Q ss_pred CCCceeeeecccccCCCceEEeC---CCCcccHHHHHHHHhcCC----CCcccccccccc
Q 017405 311 EDDAECCICLSAYDDGTELRELP---CLHHFHCSCLDKWLYINS----TCPLCKFNILKM 363 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LP---C~H~FH~~CId~WL~~~~----tCPlCR~~I~~~ 363 (372)
.++..|.+|.+ +.++..=. |...||..|+. |.... .||-|.-.+..+
T Consensus 13 ~~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~k 66 (107)
T 4gne_A 13 MHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSS 66 (107)
T ss_dssp SSCSSCTTTCC----CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTCS
T ss_pred CCCCCCCcCCC----CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCCC
Confidence 35678999983 33444333 77999999998 54322 388776555443
No 112
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=55.04 E-value=2.9 Score=31.31 Aligned_cols=47 Identities=28% Similarity=0.466 Sum_probs=31.3
Q ss_pred CceeeeecccccCCCceEEe-CCCCcccHHHHHHHHh-----cCCCCcccccc
Q 017405 313 DAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLY-----INSTCPLCKFN 359 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~ 359 (372)
...-+||-..+.++...+.- .|.-=||..|+.---. ..-.||.|+..
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 45677999888654444333 3889999999954321 23469999754
No 113
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=53.98 E-value=2.1 Score=31.82 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=29.9
Q ss_pred ceeeeecccccCCCceEEe-CCCCcccHHHHHHHH----hcCCCCcccccc
Q 017405 314 AECCICLSAYDDGTELREL-PCLHHFHCSCLDKWL----YINSTCPLCKFN 359 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL----~~~~tCPlCR~~ 359 (372)
..| ||...+.+++..+.- .|..=||..|+.-=- ..+-.||.|+..
T Consensus 17 ~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred eEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 457 798887766544333 388889999986432 223469999754
No 114
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=51.74 E-value=3.9 Score=32.34 Aligned_cols=43 Identities=26% Similarity=0.384 Sum_probs=28.7
Q ss_pred eeeeecccccCCCceEEeCCCCcccHHHHHHHHhc---CCCCccccc
Q 017405 315 ECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYI---NSTCPLCKF 358 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~---~~tCPlCR~ 358 (372)
.| ||-...+++.-|.-=.|.--||..|+..=+.. .-.||.|+.
T Consensus 30 rC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred Ee-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 45 89888776643333338899999998753221 235999974
No 115
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=51.14 E-value=1.4 Score=32.43 Aligned_cols=44 Identities=23% Similarity=0.385 Sum_probs=26.7
Q ss_pred ceeeeecccccCCCceEEeC---CCCcccHHHHHHH---Hh-----cCCCCccccc
Q 017405 314 AECCICLSAYDDGTELRELP---CLHHFHCSCLDKW---LY-----INSTCPLCKF 358 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LP---C~H~FH~~CId~W---L~-----~~~tCPlCR~ 358 (372)
..-+||-...+++. .+.-- |..=||..|+.-= .. .+-.||.||.
T Consensus 10 ~v~C~C~~~~~~g~-mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRCICSSTMVNDS-MIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECCTTCCCSCCSC-EEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEeECCCCcCCCC-EEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 34458987766663 33332 7778999998321 00 1345999974
No 116
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=49.24 E-value=1.6 Score=33.31 Aligned_cols=44 Identities=30% Similarity=0.517 Sum_probs=25.7
Q ss_pred eeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcC-----CCCcccccc
Q 017405 315 ECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYIN-----STCPLCKFN 359 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~-----~tCPlCR~~ 359 (372)
.|.+|...-+. +.+..- -|...||..|++.=|... =.||.|+.+
T Consensus 28 ~C~vC~~~~d~-~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~d 77 (77)
T 3shb_A 28 ACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 77 (77)
T ss_dssp SBTTTCCCSCG-GGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC--
T ss_pred cCCccCCCCCC-cceeEeCCCCCccCcccCCCcccCCCCCCceECcCcccc
Confidence 46666654322 233222 278999999999755431 249999753
No 117
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=48.48 E-value=2.7 Score=30.18 Aligned_cols=42 Identities=31% Similarity=0.717 Sum_probs=25.4
Q ss_pred CceeeeecccccCCCceEEe-C--CC-CcccHHHHHHHHhcC----CCCccccc
Q 017405 313 DAECCICLSAYDDGTELREL-P--CL-HHFHCSCLDKWLYIN----STCPLCKF 358 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L-P--C~-H~FH~~CId~WL~~~----~tCPlCR~ 358 (372)
+...+||-... .+ ++..- . |. .-||..|+. |... -.||.|+.
T Consensus 8 e~~yC~C~~~~-~g-~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYCLCHQVS-YG-EMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEETTTTEEC-CS-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCcEEECCCCC-CC-CeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 34555998875 34 22221 2 44 589999998 4432 24999964
No 118
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=47.47 E-value=2.8 Score=30.19 Aligned_cols=42 Identities=29% Similarity=0.696 Sum_probs=25.1
Q ss_pred CceeeeecccccCCCceEEe-C--CC-CcccHHHHHHHHhcC----CCCccccc
Q 017405 313 DAECCICLSAYDDGTELREL-P--CL-HHFHCSCLDKWLYIN----STCPLCKF 358 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L-P--C~-H~FH~~CId~WL~~~----~tCPlCR~ 358 (372)
+...+||..... + ++..- . |. .-||..|+. |... -.||.|+.
T Consensus 9 e~~~C~C~~~~~-g-~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYCLCHQVSY-G-EMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEETTTTEECC-S-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEEECCCcCC-C-CEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 345559988743 3 22221 1 33 469999998 5432 24999964
No 119
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=47.12 E-value=11 Score=36.97 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=31.1
Q ss_pred ceeeeecccccCCCceEEeCCCCc--ccHHHHHHHHhcC--CCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHH--FHCSCLDKWLYIN--STCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~--FH~~CId~WL~~~--~tCPlCR~~I~~ 362 (372)
..|++-...++.+ +|-..|.|. |-.+=+-+..... -.||+|.+.+..
T Consensus 250 L~CPlS~~ri~~P--vRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 250 LQCPISYTRMKYP--SKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp SBCTTTSSBCSSE--EEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred ecCCCcccccccc--CcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 4799888776665 677889997 6544333332232 359999887643
No 120
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=44.97 E-value=12 Score=36.46 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=31.7
Q ss_pred ceeeeecccccCCCceEEeCCCCc--ccHHHHHHHHhcC--CCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHH--FHCSCLDKWLYIN--STCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~--FH~~CId~WL~~~--~tCPlCR~~I~~ 362 (372)
..|+|-...++.+ +|-..|.|. |-.+=+-+....+ -.||+|.+.+..
T Consensus 216 L~CPlS~~ri~~P--~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 216 LMCPLGKMRLTIP--CRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp SBCTTTCSBCSSE--EEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred eeCCCccceeccC--CcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 4699888777665 677889998 6654433333333 359999987753
No 121
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=43.07 E-value=13 Score=29.92 Aligned_cols=34 Identities=29% Similarity=0.458 Sum_probs=22.7
Q ss_pred ceeeeeccccc------CCCceEE-eCCCCcccHHHHHHHH
Q 017405 314 AECCICLSAYD------DGTELRE-LPCLHHFHCSCLDKWL 347 (372)
Q Consensus 314 ~eC~ICL~~y~------~~d~lr~-LPC~H~FH~~CId~WL 347 (372)
..|.+|+..-. +++++.. -.|+..||..|++...
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~ 42 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTL 42 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCH
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChh
Confidence 46899987542 1233333 3489999999998653
No 122
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=41.28 E-value=5.2 Score=40.26 Aligned_cols=48 Identities=27% Similarity=0.434 Sum_probs=32.3
Q ss_pred CceeeeecccccCCCceEEeC-CCCcccHHHHHHHHh-----cCCCCccccccc
Q 017405 313 DAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLY-----INSTCPLCKFNI 360 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~-----~~~tCPlCR~~I 360 (372)
....|||...+.++...+.-- |.-=||..|+.-=-. .+-.||.|+..-
T Consensus 4 ~~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 4 VPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CCeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 357889999886554444433 888999999952211 245699997643
No 123
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.97 E-value=15 Score=26.64 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=30.5
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
....|..|-+.+.+++.+. .-+..||.+| -.|-.|+.++..
T Consensus 8 ~~~~C~~C~~~I~~~~~v~--a~~~~~H~~C--------F~C~~C~~~L~~ 48 (76)
T 2cu8_A 8 MASKCPKCDKTVYFAEKVS--SLGKDWHKFC--------LKCERCSKTLTP 48 (76)
T ss_dssp CCCBCTTTCCBCCTTTEEE--ETTEEEETTT--------CBCSSSCCBCCT
T ss_pred CCCCCcCCCCEeECCeEEE--ECCeEeeCCC--------CCCCCCCCccCC
Confidence 3467999999988776554 3478899887 348888887764
No 124
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=40.34 E-value=4.5 Score=29.87 Aligned_cols=46 Identities=17% Similarity=0.382 Sum_probs=28.4
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHh---cCCCCccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLY---INSTCPLCKF 358 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~---~~~tCPlCR~ 358 (372)
+...| ||-..+.++.-|.---|..=||..|+.-=-. ..-.||.|+.
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 33456 9998876332232223888999999864221 2345999964
No 125
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=39.85 E-value=22 Score=30.10 Aligned_cols=44 Identities=25% Similarity=0.429 Sum_probs=30.2
Q ss_pred CCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHHh-----------cCCCCccccc
Q 017405 311 EDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLY-----------INSTCPLCKF 358 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~-----------~~~tCPlCR~ 358 (372)
..+..|.+|-+. | ++.-- .|...||..||+.=+. ..=.||.|..
T Consensus 61 g~~d~C~vC~~G---G-~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 61 GMDEQCRWCAEG---G-NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCBCSCSSSCCC---S-SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCeecccCCC---C-cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 356789999863 3 33333 3889999999997653 1225999974
No 126
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=37.47 E-value=4.9 Score=32.12 Aligned_cols=44 Identities=20% Similarity=0.455 Sum_probs=27.4
Q ss_pred eeeeecccccCCCceEEe-CCCCcccHHHHHHHHhcC----CCCcccccc
Q 017405 315 ECCICLSAYDDGTELREL-PCLHHFHCSCLDKWLYIN----STCPLCKFN 359 (372)
Q Consensus 315 eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL~~~----~tCPlCR~~ 359 (372)
.|.+|-..-++. .+..- .|...||..|+++=+... -.||.|+.-
T Consensus 56 ~C~~C~~~~~~~-~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 56 VCQNCKQSGEDS-KMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp CCTTTCCCSCCT-TEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred cccccCccCCCC-CeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 466776653332 33333 388999999998655432 249999653
No 127
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=37.07 E-value=22 Score=24.30 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHH
Q 017405 227 FVMICVGVACLIGI 240 (372)
Q Consensus 227 fvv~~val~~li~i 240 (372)
|+-||..++|++.|
T Consensus 32 fvnfclilicllli 45 (52)
T 1fjk_A 32 FINFCLILIFLLLI 45 (52)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555555544
No 128
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.32 E-value=21 Score=26.12 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=29.0
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
....|.-|-+.+.+. . ...-+..||.+|. .|-.|+..+..
T Consensus 14 ~~~~C~~C~~~I~~~-~--~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (79)
T 1x62_A 14 KLPMCDKCGTGIVGV-F--VKLRDRHRHPECY--------VCTDCGTNLKQ 53 (79)
T ss_dssp CCCCCSSSCCCCCSS-C--EECSSCEECTTTT--------SCSSSCCCHHH
T ss_pred CCCccccCCCCccCc-E--EEECcceeCcCcC--------eeCCCCCCCCC
Confidence 456899999988753 3 3345789999884 48888877753
No 129
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=33.62 E-value=6.5 Score=28.46 Aligned_cols=42 Identities=31% Similarity=0.702 Sum_probs=25.3
Q ss_pred CceeeeecccccCCCceEEeC---CC-CcccHHHHHHHHhc----CCCCccccc
Q 017405 313 DAECCICLSAYDDGTELRELP---CL-HHFHCSCLDKWLYI----NSTCPLCKF 358 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LP---C~-H~FH~~CId~WL~~----~~tCPlCR~ 358 (372)
+...+||-... .+ +++.-- |. .-||..|+. |.. +-.||.|+.
T Consensus 10 e~~yC~C~~~~-~g-~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYCLCNQVS-YG-EMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEETTTTEEC-CS-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCcEEECCCCC-CC-CeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 34555998863 34 222222 33 689999997 332 234999964
No 130
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=33.44 E-value=9.6 Score=30.77 Aligned_cols=24 Identities=33% Similarity=0.618 Sum_probs=15.4
Q ss_pred CCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 333 PCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 333 PC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
.||+.| .+=+.....||.||++=.
T Consensus 72 ~CG~~F-----~~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 72 KCGFVF-----KAEINIPSRCPKCKSEWI 95 (105)
T ss_dssp TTCCBC-----CCCSSCCSSCSSSCCCCB
T ss_pred hCcCee-----cccCCCCCCCcCCCCCcc
Confidence 488888 122234567999987543
No 131
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.46 E-value=49 Score=24.80 Aligned_cols=41 Identities=24% Similarity=0.486 Sum_probs=26.6
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
...|.-|-+.+.+.+.+ ..-+..||.+|. .|-.|+.++...
T Consensus 15 ~~~C~~C~~~I~~~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~~ 55 (91)
T 2d8y_A 15 RETCVECQKTVYPMERL--LANQQVFHISCF--------RCSYCNNKLSLG 55 (91)
T ss_dssp SCBCTTTCCBCCTTSEE--ECSSSEEETTTC--------BCTTTCCBCCTT
T ss_pred CCcCccCCCccCCceeE--EECCCEECCCCC--------eeCCCCCCCCCC
Confidence 45788888887766543 345777887773 366676666543
No 132
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=32.07 E-value=13 Score=27.66 Aligned_cols=20 Identities=30% Similarity=0.486 Sum_probs=13.3
Q ss_pred HHHHHhcCCCCccccccccc
Q 017405 343 LDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 343 Id~WL~~~~tCPlCR~~I~~ 362 (372)
+|+||...-.||.||.++..
T Consensus 1 md~~LLeiL~CP~ck~~L~~ 20 (69)
T 2pk7_A 1 MDTKLLDILACPICKGPLKL 20 (69)
T ss_dssp --CCGGGTCCCTTTCCCCEE
T ss_pred CChHHHhheeCCCCCCcCeE
Confidence 35667777778888887754
No 133
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.94 E-value=39 Score=24.99 Aligned_cols=43 Identities=23% Similarity=0.372 Sum_probs=31.3
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccccC
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKMS 364 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 364 (372)
....|.-|-+.+.+.+.+. .-+..||.+| -.|-.|+..+....
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~C--------F~C~~C~~~L~~~~ 56 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSC--------FRCHTCEATLWPGG 56 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTT--------CBCSSSCCBCCTTS
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCc--------CEEcCCCCCcCCCc
Confidence 4468999999987776654 3578999988 34778877776543
No 134
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=31.79 E-value=13 Score=27.07 Aligned_cols=43 Identities=9% Similarity=0.040 Sum_probs=21.2
Q ss_pred CCCceeeeecccccCCCceEEeCCCCcccH-HHHHHHHhcCCCCcccc
Q 017405 311 EDDAECCICLSAYDDGTELRELPCLHHFHC-SCLDKWLYINSTCPLCK 357 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC~H~FH~-~CId~WL~~~~tCPlCR 357 (372)
.+-..|..|-..+.++. .. ..=+..|+. .|..+-+ ...|--|.
T Consensus 25 ~~CF~C~~C~~~L~~~~-~~-~~~g~~yC~~~cy~~~f--~~~C~~C~ 68 (76)
T 1iml_A 25 RPCLKCEKCGKTLTSGG-HA-EHEGKPYCNHPCYSAMF--GPKGFGRG 68 (76)
T ss_dssp TTTCBCTTTCCBCCTTT-EE-EETTEEEETTTHHHHHS--SCCCSSCC
T ss_pred CCCCCccccCccCCCCc-eE-CcCCeEeeCHHHHHHHh--CccCCCcC
Confidence 34456777776666542 11 123445555 3554422 34466664
No 135
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.36 E-value=33 Score=25.36 Aligned_cols=40 Identities=25% Similarity=0.581 Sum_probs=30.6
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
....|.-|-+.+.+++.+..+ +..||.+| ..|-.|+.++.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a~--~~~wH~~C--------F~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLAL--DKQWHVSC--------FKCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEET--TEEECTTT--------CBCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCCeEEEEC--Cccccccc--------CCcCcCCCCcC
Confidence 346799999998877766554 78899887 35888887775
No 136
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=31.34 E-value=8.9 Score=28.41 Aligned_cols=21 Identities=29% Similarity=0.243 Sum_probs=16.4
Q ss_pred HHHHHhcCCCCcccccccccc
Q 017405 343 LDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 343 Id~WL~~~~tCPlCR~~I~~~ 363 (372)
+++||...-.||.||.++...
T Consensus 3 md~~LLeiL~CP~ck~~L~~~ 23 (67)
T 2jny_A 3 LDPQLLEVLACPKDKGPLRYL 23 (67)
T ss_dssp SCGGGTCCCBCTTTCCBCEEE
T ss_pred CCHHHHHHhCCCCCCCcCeEe
Confidence 357888888899999987643
No 137
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=29.01 E-value=48 Score=27.53 Aligned_cols=45 Identities=27% Similarity=0.492 Sum_probs=29.0
Q ss_pred CCCceeeeecccccCCCceEEe-CCCCcccHHHHHHHH------hc-----CCCCcccccc
Q 017405 311 EDDAECCICLSAYDDGTELREL-PCLHHFHCSCLDKWL------YI-----NSTCPLCKFN 359 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~WL------~~-----~~tCPlCR~~ 359 (372)
..+..|.||-+. | ++.-= .|-..||.+||++=+ +. .=.|+.|...
T Consensus 55 g~~~~C~vC~dG---G-~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 55 GMDEQCRWCAEG---G-NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SCBSSCTTTCCC---S-EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCcCeecCCC---C-eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 345679999864 3 23222 277999999999742 22 1259999643
No 138
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.67 E-value=12 Score=27.78 Aligned_cols=46 Identities=24% Similarity=0.442 Sum_probs=26.3
Q ss_pred ceeeeecccccCCCceEEeCCC---CcccHHHHHHHHhc----CCCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCL---HHFHCSCLDKWLYI----NSTCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~---H~FH~~CId~WL~~----~~tCPlCR~~I~~ 362 (372)
..-+||-... +++.|.--.|+ .-||..|+. |.. +-.||.|+.....
T Consensus 6 ~~yC~C~~~~-~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~~k 58 (70)
T 1x4i_A 6 SGYCICNQVS-YGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAMKR 58 (70)
T ss_dssp CCCSTTSCCC-CSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHHHH
T ss_pred CeEEEcCCCC-CCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCccccc
Confidence 3445788763 34222111232 579999997 332 2349999876543
No 139
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=27.66 E-value=1.5e+02 Score=23.17 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=34.8
Q ss_pred CCceeeeeccccc---CCCceEEe-CCCCcccHHHHHHHHh-cCCCCcccccccc
Q 017405 312 DDAECCICLSAYD---DGTELREL-PCLHHFHCSCLDKWLY-INSTCPLCKFNIL 361 (372)
Q Consensus 312 ed~eC~ICL~~y~---~~d~lr~L-PC~H~FH~~CId~WL~-~~~tCPlCR~~I~ 361 (372)
....|.||-++.. +|+....- -|+--.++.|.+-=.+ .+..||-||....
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 4468999999864 33322221 2677789999886554 5778999998775
No 140
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=25.57 E-value=58 Score=24.27 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=28.9
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
....|.-|-+.+.+ +.+ ..-+..||.+| ..|-.|+..+...
T Consensus 24 ~~~~C~~C~~~I~~-~~~--~a~~~~~H~~C--------F~C~~C~~~L~~~ 64 (89)
T 1x64_A 24 RMPLCDKCGSGIVG-AVV--KARDKYRHPEC--------FVCADCNLNLKQK 64 (89)
T ss_dssp SCCBCTTTCCBCCS-CCE--ESSSCEECTTT--------CCCSSSCCCTTTS
T ss_pred cCCCcccCCCEecc-cEE--EECCceECccC--------CEecCCCCCCCCC
Confidence 34679999998875 333 34678999888 3488888777543
No 141
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.46 E-value=33 Score=24.44 Aligned_cols=39 Identities=21% Similarity=0.576 Sum_probs=26.3
Q ss_pred ceeeeecccccC--CCceEEeCCCCcccHHHHHHHHhcCCCCcccccccc
Q 017405 314 AECCICLSAYDD--GTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNIL 361 (372)
Q Consensus 314 ~eC~ICL~~y~~--~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 361 (372)
..|.-|-+.+.+ ++++. ..-+..||.+|. .|-.|+.++.
T Consensus 6 ~~C~~C~~~I~~~~~~~~~-~a~~~~wH~~CF--------~C~~C~~~L~ 46 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKYI-SFEERQWHNDCF--------NCKKCSLSLV 46 (72)
T ss_dssp CSBTTTTBCCCCSSSCSCE-ECSSCEECTTTC--------BCSSSCCBCT
T ss_pred CCCcCCCccccCCCCcceE-EECCcccCcccC--------EeccCCCcCC
Confidence 568888888775 33332 235788888773 5778877765
No 142
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.27 E-value=65 Score=24.02 Aligned_cols=40 Identities=20% Similarity=0.388 Sum_probs=28.2
Q ss_pred CCceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 312 DDAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
....|.-|-+.+. ++.+ ..-+..||.+|. .|-.|+..+..
T Consensus 24 ~~~~C~~C~~~I~-~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~ 63 (90)
T 2dar_A 24 RTPMCAHCNQVIR-GPFL--VALGKSWHPEEF--------NCAHCKNTMAY 63 (90)
T ss_dssp CCCBBSSSCCBCC-SCEE--EETTEEECTTTC--------BCSSSCCBCSS
T ss_pred CCCCCccCCCEec-ceEE--EECCccccccCC--------ccCCCCCCCCC
Confidence 3467999999885 3333 345889998873 58888887764
No 143
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=25.16 E-value=12 Score=27.53 Aligned_cols=39 Identities=23% Similarity=0.499 Sum_probs=25.0
Q ss_pred ceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
..|..|-+.+.+++.+.. -+..||.+|. .|-.|+.++..
T Consensus 8 ~~C~~C~~~I~~~~~~~a--~~~~~H~~CF--------~C~~C~~~L~~ 46 (81)
T 1a7i_A 8 NKCGACGRTVYHAEEVQC--DGRSFHRCCF--------LCMVCRKNLDS 46 (81)
T ss_dssp CBCSSSCCBCSSTTEEEE--TTEEEESSSE--------ECSSSCCEECS
T ss_pred CcCcCcCccccCceeEEe--CCcccccccC--------ccCCCCCCCCC
Confidence 468888887766654433 4677777663 36677766644
No 144
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=24.69 E-value=31 Score=25.49 Aligned_cols=31 Identities=26% Similarity=0.594 Sum_probs=24.4
Q ss_pred CCCceeeeecccccCCCceEEeCC-CCcccHHHHHH
Q 017405 311 EDDAECCICLSAYDDGTELRELPC-LHHFHCSCLDK 345 (372)
Q Consensus 311 ~ed~eC~ICL~~y~~~d~lr~LPC-~H~FH~~CId~ 345 (372)
++..-|+||.++ ..++-+.| +-.|+..|..+
T Consensus 6 ee~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE 37 (67)
T 2d8v_A 6 SGLPWCCICNED----ATLRCAGCDGDLYCARCFRE 37 (67)
T ss_dssp CCCSSCTTTCSC----CCEEETTTTSEEECSSHHHH
T ss_pred cCCCeeEEeCCC----CeEEecCCCCceehHHHHHH
Confidence 355679999987 56888899 68999989544
No 145
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=24.66 E-value=5.5 Score=25.68 Aligned_cols=14 Identities=14% Similarity=0.432 Sum_probs=9.0
Q ss_pred ceeeeecccccCCC
Q 017405 314 AECCICLSAYDDGT 327 (372)
Q Consensus 314 ~eC~ICL~~y~~~d 327 (372)
..|+||+.++...+
T Consensus 6 FiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 6 FICPQCMKSLGSAD 19 (34)
T ss_dssp EECTTTCCEESSHH
T ss_pred cCCcHHHHHcCCHH
Confidence 46777777766543
No 146
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=24.23 E-value=30 Score=27.67 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=10.6
Q ss_pred cccHHHHHHHHh
Q 017405 337 HFHCSCLDKWLY 348 (372)
Q Consensus 337 ~FH~~CId~WL~ 348 (372)
-||..|+.+|++
T Consensus 42 GFCRNCLskWy~ 53 (105)
T 2o35_A 42 GFCRNCLSNWYR 53 (105)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999986
No 147
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=23.90 E-value=30 Score=27.56 Aligned_cols=12 Identities=50% Similarity=1.143 Sum_probs=10.7
Q ss_pred cccHHHHHHHHh
Q 017405 337 HFHCSCLDKWLY 348 (372)
Q Consensus 337 ~FH~~CId~WL~ 348 (372)
-||..|+.+|+.
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999986
No 148
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.80 E-value=59 Score=23.23 Aligned_cols=42 Identities=17% Similarity=0.392 Sum_probs=29.2
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
...|.-|-+.+..++.+.. .-+..||.+| -.|-.|+.++...
T Consensus 11 ~~~C~~C~~~I~~~~~~~~-a~~~~~H~~C--------F~C~~C~~~L~~~ 52 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVN-SNGELYHEQC--------FVCAQCFQQFPEG 52 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEE-ETTEEECTTT--------CCCTTTCCCCGGG
T ss_pred CCCchhcCCccCCCceEEE-eCccEecccc--------CeECCCCCCCCCC
Confidence 4679999998876555432 2477888877 3478888777654
No 149
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=23.69 E-value=28 Score=29.10 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=23.4
Q ss_pred CCceeeeeccccc--CCCceEEeCCCCcccHHHHH
Q 017405 312 DDAECCICLSAYD--DGTELRELPCLHHFHCSCLD 344 (372)
Q Consensus 312 ed~eC~ICL~~y~--~~d~lr~LPC~H~FH~~CId 344 (372)
++..|.+|...|. .+....-..|.|.++..|=.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 4578999999993 33344444599999888843
No 150
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=23.64 E-value=28 Score=24.53 Aligned_cols=42 Identities=17% Similarity=0.430 Sum_probs=30.7
Q ss_pred CceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 313 DAECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
...|.-|-..+..++.+.. .=+..||.+|. .|-.|+.++...
T Consensus 11 ~~~C~~C~~~i~~~e~~~~-~~~~~~H~~CF--------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF--------VCAQCFQQFPEG 52 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEE-ETTEEEETTTS--------SCTTTCCCCGGG
T ss_pred CccchhcCccccCCceEEE-eCcCeeCcCCC--------cccCCCCCCCCC
Confidence 3579999999887765533 35778998885 588888877654
No 151
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=23.39 E-value=9 Score=27.27 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=14.2
Q ss_pred HHHHhcCCCCccccccccc
Q 017405 344 DKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 344 d~WL~~~~tCPlCR~~I~~ 362 (372)
++||..--.||.||.++..
T Consensus 4 d~~lL~iL~CP~c~~~L~~ 22 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEE 22 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEE
T ss_pred CHHHHhheeCCCCCCccee
Confidence 4566667789999998654
No 152
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.79 E-value=40 Score=23.86 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=26.2
Q ss_pred ceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
..|.-|-+.+.+++++ ...-+..||.+|. .|-.|+.++..
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~~ 45 (72)
T 1wyh_A 6 SGCSACGETVMPGSRK-LEYGGQTWHEHCF--------LCSGCEQPLGS 45 (72)
T ss_dssp CBCSSSCCBCCSSSCE-ECSTTCCEETTTC--------BCTTTCCBTTT
T ss_pred CCCccCCCccccCccE-EEECccccCcccC--------eECCCCCcCCC
Confidence 4688888887765433 2335778887773 47777776654
No 153
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.78 E-value=62 Score=22.84 Aligned_cols=38 Identities=18% Similarity=0.390 Sum_probs=19.4
Q ss_pred ceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNI 360 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I 360 (372)
..|.-|-+.+..++.+. ..=+..||.+| -.|-.|+.++
T Consensus 6 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~C--------F~C~~C~~~L 43 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAGV-VALDRVFHVGC--------FVCSTCRAQL 43 (72)
T ss_dssp CCCSSSCSCCCSSSCCE-ECSSSEECTTT--------CBCSSSCCBC
T ss_pred CCCccCCCccCCCceEE-EECCCeEcccC--------CcccccCCcC
Confidence 35666666555432221 22356666655 2366666555
No 154
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=22.69 E-value=19 Score=22.12 Aligned_cols=13 Identities=23% Similarity=0.823 Sum_probs=9.3
Q ss_pred CCCCccccccccc
Q 017405 350 NSTCPLCKFNILK 362 (372)
Q Consensus 350 ~~tCPlCR~~I~~ 362 (372)
+.+||+||...+.
T Consensus 3 k~~CpvCk~q~Pd 15 (28)
T 2jvx_A 3 DFCCPKCQYQAPD 15 (28)
T ss_dssp CEECTTSSCEESS
T ss_pred cccCccccccCcC
Confidence 3469999887654
No 155
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.64 E-value=32 Score=24.37 Aligned_cols=38 Identities=18% Similarity=0.473 Sum_probs=23.6
Q ss_pred ceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 362 (372)
..|.-|-+.+.+ +.+. .-+..||.+|. .|-.|+.++..
T Consensus 6 ~~C~~C~~~I~~-~~~~--a~~~~~H~~CF--------~C~~C~~~L~~ 43 (70)
T 2d8x_A 6 SGCHQCGEFIIG-RVIK--AMNNSWHPECF--------RCDLCQEVLAD 43 (70)
T ss_dssp SBCSSSCCBCCS-CCEE--ETTEEECTTTS--------BCSSSCCBCSS
T ss_pred CcCccCCCEecc-eEEE--ECcccccccCC--------EeCCCCCcCCC
Confidence 467777777763 3333 24677777773 47777766654
No 156
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=22.06 E-value=10 Score=28.09 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=14.1
Q ss_pred HHHHhcCCCCccccccccc
Q 017405 344 DKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 344 d~WL~~~~tCPlCR~~I~~ 362 (372)
|+||..--.||.||.++..
T Consensus 2 d~~LL~iL~CP~ck~~L~~ 20 (68)
T 2jr6_A 2 EKKFLDILVCPVTKGRLEY 20 (68)
T ss_dssp CCSSSCCCBCSSSCCBCEE
T ss_pred ChHHhhheECCCCCCcCeE
Confidence 4566666789999988754
No 157
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=21.44 E-value=44 Score=24.56 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=24.0
Q ss_pred CceeeeecccccCCCceEE-eCCCCcccHHHHHHH
Q 017405 313 DAECCICLSAYDDGTELRE-LPCLHHFHCSCLDKW 346 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~-LPC~H~FH~~CId~W 346 (372)
+..|.+|...|.--..-.. -.||++|+.+|-...
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~ 45 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNS 45 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEE
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccCCe
Confidence 3589999999975432222 249999999996543
No 158
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=21.37 E-value=41 Score=25.81 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=35.1
Q ss_pred CCceeeeecccccCCCceEE-eCCCCcccHHHHHHHHh-------cCCCCccccccccccC
Q 017405 312 DDAECCICLSAYDDGTELRE-LPCLHHFHCSCLDKWLY-------INSTCPLCKFNILKMS 364 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~-LPC~H~FH~~CId~WL~-------~~~tCPlCR~~I~~~~ 364 (372)
+...|.+|...|.--..-.. -.||++|+..|...... ....|-.|...+....
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~~ 68 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRGS 68 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHCC
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhcc
Confidence 44689999999986532222 24999999999876432 1235888866655433
No 159
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=21.10 E-value=26 Score=35.56 Aligned_cols=48 Identities=27% Similarity=0.477 Sum_probs=31.6
Q ss_pred CCceeeeecccccCCCceEEeC-CCCcccHHHHHHHHh-----cCCCCcccccc
Q 017405 312 DDAECCICLSAYDDGTELRELP-CLHHFHCSCLDKWLY-----INSTCPLCKFN 359 (372)
Q Consensus 312 ed~eC~ICL~~y~~~d~lr~LP-C~H~FH~~CId~WL~-----~~~tCPlCR~~ 359 (372)
.+..-|||...++++...+.-- |.-=||..|+.-=-. .+-.||.|+..
T Consensus 35 ~~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 35 PPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 3456679999886554444433 889999999953221 23469999753
No 160
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=20.92 E-value=34 Score=30.50 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=24.9
Q ss_pred CceeeeecccccCCCceEEe-CCCCcccHHHHHHH
Q 017405 313 DAECCICLSAYDDGTELREL-PCLHHFHCSCLDKW 346 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~L-PC~H~FH~~CId~W 346 (372)
+..|.+|...|.--..-..- .||++||..|-...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 47999999999754322233 49999999997654
No 161
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=20.41 E-value=10 Score=28.08 Aligned_cols=19 Identities=32% Similarity=0.495 Sum_probs=13.5
Q ss_pred HHHHhcCCCCccccccccc
Q 017405 344 DKWLYINSTCPLCKFNILK 362 (372)
Q Consensus 344 d~WL~~~~tCPlCR~~I~~ 362 (372)
|+||..--.||.||.++..
T Consensus 2 d~~LL~iL~CP~ck~~L~~ 20 (68)
T 2hf1_A 2 DAKFLEILVCPLCKGPLVF 20 (68)
T ss_dssp CCCCEEECBCTTTCCBCEE
T ss_pred ChHHhhheECCCCCCcCeE
Confidence 3455556679999988754
No 162
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.31 E-value=61 Score=23.54 Aligned_cols=41 Identities=27% Similarity=0.359 Sum_probs=28.7
Q ss_pred ceeeeecccccCCCceEEeCCCCcccHHHHHHHHhcCCCCcccccccccc
Q 017405 314 AECCICLSAYDDGTELRELPCLHHFHCSCLDKWLYINSTCPLCKFNILKM 363 (372)
Q Consensus 314 ~eC~ICL~~y~~~d~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 363 (372)
..|..|-+.+..++.+. ..=+..||.+|. .|-.|+.++...
T Consensus 16 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~CF--------~C~~C~~~L~~~ 56 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQNV-EYKGTVWHKDCF--------TCSNCKQVIGTG 56 (82)
T ss_dssp CBCSSSCCBCCSSSCEE-ECSSCEEETTTC--------CCSSSCCCCTTS
T ss_pred CcCccCCcccccCceEE-EECccccccccC--------chhhCCCccCCC
Confidence 57999999888766543 234788898773 477887777543
No 163
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.30 E-value=74 Score=23.89 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=24.2
Q ss_pred CceeeeecccccCCCceEE-eCCCCcccHHHHHHH
Q 017405 313 DAECCICLSAYDDGTELRE-LPCLHHFHCSCLDKW 346 (372)
Q Consensus 313 d~eC~ICL~~y~~~d~lr~-LPC~H~FH~~CId~W 346 (372)
...|.+|...|.--..-.. -.||++|+..|-...
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 3579999999965432222 349999999997654
Done!