BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017406
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 347 bits (889), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/365 (54%), Positives = 252/365 (69%), Gaps = 27/365 (7%)
Query: 21 ALDGLFCDEESFEFEECCIDAETERCEEK--ESPLP----PVLQEHDLF-WDDNELLSLI 73
LDGL+C+EE+ E+ D EK ES + P+L D+F WDD+E+LSLI
Sbjct: 17 VLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLL---DMFLWDDDEILSLI 73
Query: 74 CKEKKENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSF 133
KE + N + I D L+ RKE ++WVLRVK+H+GFT+LTAILAVNYFDRF+ S
Sbjct: 74 SKENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKL 133
Query: 134 QKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQW 193
Q DKPWM QLVAVA LSLAAKV+E QVPLLLDLQV++ +Y+FEAKTIQRMELL+LSTLQW
Sbjct: 134 QTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQW 193
Query: 194 RMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLH 253
RM+PVTPISFFDHI+RR G K H +F +CE LL+SVIAD+RFM Y PS LATA M+
Sbjct: 194 RMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMIL 253
Query: 254 TIQEVEPCNPVEHQNLLMGVLNISQQDKLKECYLLILELSRGNGSQNQSCKR-KHFPLPG 312
+E++PC+ VE+Q+ + +L ++Q+ K+ ECY L+LE N S KR +
Sbjct: 254 VFEELKPCDEVEYQSQITTLLKVNQE-KVNECYELLLE-------HNPSKKRMMNLVDQD 305
Query: 313 SPSCIIDANFSCDSSNDSW-----PAASPFSSPPEPRFKRSRIHVQQMRLPSLTRTFVDV 367
SPS ++D + DSSN SW + S SS PEP KR R+ QQMRLPS+ R F+DV
Sbjct: 306 SPSGVLDFD---DSSNSSWNVSTTASVSSSSSSPEPLLKRRRVQEQQMRLPSINRMFLDV 362
Query: 368 LSSPR 372
LSSPR
Sbjct: 363 LSSPR 367
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 314 bits (804), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/356 (49%), Positives = 237/356 (66%), Gaps = 14/356 (3%)
Query: 21 ALDGLFCDEESFEFEECCIDAETERCEEKESPLPPV---LQEHDLFWDDNELLSLICKEK 77
LDGLFC+EES EF E + + C+E P + L +HD+ WDD+EL +LI K+
Sbjct: 16 VLDGLFCEEES-EFHE-----QVDLCDESVEKFPFLNLGLSDHDMLWDDDELSTLISKQ- 68
Query: 78 KENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDK 137
E + + + DE L+L R++ ++W+ +VK+H+GF +LTA+LAVNYFDRFI S FQ DK
Sbjct: 69 -EPCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDK 127
Query: 138 PWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNP 197
PWM QL A+ACLSLAAKV+E +VP LLD QV++ +YVFEAKTIQRMELLVLSTL WRM+P
Sbjct: 128 PWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHP 187
Query: 198 VTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQE 257
VTPISFFDHI+RR K+H EFL RCE LLLS+I DSRF+ + PS LATA M+ I++
Sbjct: 188 VTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRD 247
Query: 258 VEPCNPVEHQNLLMGVLNISQQDKLKECYLLILELSRGNGSQNQSCKRKHFPLPGSPSCI 317
++ C+ +Q+ LM +L + + K+ +CY L+L+ S ++ P+ G
Sbjct: 248 LKMCDEAVYQSQLMTLLKVDSE-KVNKCYELVLDHSPSKKRMMNWMQQPASPI-GVFDAS 305
Query: 318 IDANFSCDSSNDSWPAASPFSSPPEPRFKRSRIHVQQMRLPSLTRTFVDVL-SSPR 372
++ S +S S A+ S EP KR R+ QQMRL S+ R F DVL SSPR
Sbjct: 306 FSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQQMRLSSINRMFFDVLSSSPR 361
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 310 bits (793), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/322 (52%), Positives = 225/322 (69%), Gaps = 23/322 (7%)
Query: 16 ETTPLALDGLFCDEESFEFEECCIDAETERCEEKESPL----PPVLQEHDLFWDDNELLS 71
++ LD L+C+EE + D E E EE S P V+ + DLFW+D +L++
Sbjct: 13 QSNSFLLDALYCEEEKW-------DDEGEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVT 65
Query: 72 LICKEKKENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSH 131
L KE+++ D D L RKE V W+LRV AH+GF+ L A+LA+ Y D+FI S+
Sbjct: 66 LFSKEEEQGLSCLD---DVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSY 122
Query: 132 SFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTL 191
S Q+DKPWM QLV+VACLSLAAKV+ETQVPLLLD QV++ KYVFEAKTIQRMELL+LSTL
Sbjct: 123 SLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTL 182
Query: 192 QWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATM 251
+W+M+ +TPISF DHI+RRLGLK + HW+FL +C LLLSVI+DSRF+ YLPS +A ATM
Sbjct: 183 EWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATM 242
Query: 252 LHTIQEVEPCNPVEHQNLLMGVLNISQQDKLKECYLLILEL---SRGNGSQNQSCKRKH- 307
+ I++V+P +P+ +Q L+GVLN++++ K+K CY LIL+L G Q QS K++
Sbjct: 243 MRIIEQVDPFDPLSYQTNLLGVLNLTKE-KVKTCYDLILQLPVDRIGLQIQIQSSKKRKS 301
Query: 308 ---FPLPGSPSCIIDAN-FSCD 325
SPSC+IDAN F+ D
Sbjct: 302 HDSSSSLNSPSCVIDANPFNSD 323
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 143/239 (59%), Gaps = 9/239 (3%)
Query: 87 ISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAV 146
+S ++ + R + ++W+L+V AH+ F L L++NY DRF+ S+ KDK W QL+AV
Sbjct: 88 LSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAV 147
Query: 147 ACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDH 206
+CLSLA+K++ET VP ++DLQV+DPK+VFEAKTI+RMELLV++TL WR+ +TP SF D+
Sbjct: 148 SCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDY 207
Query: 207 IVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEH 266
V ++ H+ +YR +L+ F+ + PS +A A + E ++
Sbjct: 208 FVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGET-ECIDE 264
Query: 267 QNLLMGVLNISQQDKLKECYLLILELS-----RGNGSQNQSCKRKHFPLPGSPSCIIDA 320
+ L ++ + +Q+++K C L+ L+ RG + + +P SP +++A
Sbjct: 265 EKALSSLIYV-KQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEA 322
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQ--KDKPWMGQLVAVACLSLAA 153
R ++W+ +V+A++ F L A LAVNY DRF+ S F D PWM QL+ VACLSLAA
Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAA 163
Query: 154 KVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGL 213
K++ET P LDLQV +P+YVF+A+TI RME++VL+TL+WRM VTP ++ H + ++
Sbjct: 164 KMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINE 223
Query: 214 KTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQE 257
+ E + RC ++LS + + F+ + PS +ATA L + +
Sbjct: 224 GNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVAD 267
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 145/286 (50%), Gaps = 30/286 (10%)
Query: 25 LFCDEESFEFE-ECCIDAETERCEEKESPLPPVLQEHDLFWDDNELLSLICKEKKENFVP 83
LFC E+S F E +D + + W + + I E + +FVP
Sbjct: 22 LFCGEDSGVFSGESTVDFSSSEVDS---------------WPGDSIACFI--EDERHFVP 64
Query: 84 S-DPISD----EILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKP 138
D +S + AR++ V W+L+V+A++ F LTA LAVNY DRF+ + +
Sbjct: 65 GHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSG 124
Query: 139 WMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPV 198
W QL+AVACLSLAAK++E VP L D QV KY+FEAKTI+RMELLVLS L WR+ V
Sbjct: 125 WPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSV 184
Query: 199 TPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEV 258
TP F ++ F+ ++LS I ++ F+ Y PS++A A +L E+
Sbjct: 185 TPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANEL 244
Query: 259 ----EPCNPVEHQNLLMGVLNISQQDKLKECYLLILELSRGNGSQN 300
NP E L+ ++K+ CY L+ ++ N N
Sbjct: 245 PSLSSVVNPHESPETWCDGLS---KEKIVRCYRLMKAMAIENNRLN 287
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 103/159 (64%)
Query: 88 SDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVA 147
++ + R E + W+ V ++ F+++TA LAVNY DRF+ + + + WM QL++VA
Sbjct: 102 GGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVA 161
Query: 148 CLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHI 207
CLS+AAK++ET VP LDLQ+ +P+++FE +TI RMELLVL+ L WRM VTP S+ D+
Sbjct: 162 CLSIAAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYF 221
Query: 208 VRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTL 246
+R+L +L R L+L + A + F+ + PS +
Sbjct: 222 LRKLNSGNAAPRSWLLRSSELILRIAAGTGFLEFRPSEI 260
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 87/116 (75%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R + ++W+ +V +++ F LTA LAVNY DRF+ + K WM QL+AVACLSLAAK+
Sbjct: 103 RMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKM 162
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRL 211
+ET VP LDLQV + +YVFEAKTIQRMELLVLSTL+WRM VTP S+ D+ +R L
Sbjct: 163 EETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL 218
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 131/226 (57%), Gaps = 8/226 (3%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
RK+ ++W+ +V +++ F L+ LAVNY DRF+ S + D+ WM QL++V+CLSLA K+
Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKM 154
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKT 215
+ET VPL +DLQV D +YVFEA+ I+RMEL+V+ TL+WR+ VTP SF + + +
Sbjct: 155 EETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGK 214
Query: 216 HLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVLN 275
+ C L + + DSRF+ + PS +A A +L + E N N +G
Sbjct: 215 PPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAE----NQFLVFNSALGESE 270
Query: 276 I-SQQDKLKECYLLILELSRGNGSQNQSCKRKHFPLPGSPSCIIDA 320
I ++ + CY L++E + +N + +P SP ++DA
Sbjct: 271 IPVNKEMVMRCYELMVEKALVKKIRNSNASSS---VPHSPITVLDA 313
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 119/209 (56%), Gaps = 27/209 (12%)
Query: 95 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAK 154
AR E V W+L+V+ + GF LTA LAVNY DRF+ + + W QL+AVACLSLAAK
Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAK 140
Query: 155 VDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
++ET VP LLDLQV+ +YVFE +TI RME L+L+ L WR+ VTP +F D
Sbjct: 141 MEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFID--------- 191
Query: 215 THLHWEFLYRCEHLLLSVI----ADSRFMCYLPSTLATATMLHTIQEVEP---CNPVEHQ 267
+ C+H+ +++ +D +F+ + PS++A A +L E NP
Sbjct: 192 -------FFACKHISNAMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAV 244
Query: 268 NLLMGVLNISQQDKLKECYLLILELSRGN 296
N +G+ ++ + CY L+ +L GN
Sbjct: 245 NWCIGL----AEEGISSCYQLMQQLVIGN 269
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 1/210 (0%)
Query: 95 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAK 154
AR + V W+L+V+ +G +TA LAV+Y DRF+ H + W QL+AV CLSLAAK
Sbjct: 115 ARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLPGNG-WAMQLLAVTCLSLAAK 173
Query: 155 VDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
++ET VP +LDLQ++D +Y+FE +TI RMELLVL L WR+ +TP +F ++
Sbjct: 174 MEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPN 233
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVL 274
E +++ + L+ I D+ F+ + PS++A A +L E+ ++H L+ +
Sbjct: 234 GKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRI 293
Query: 275 NISQQDKLKECYLLILELSRGNGSQNQSCK 304
++ + CY L+ +L N +S +
Sbjct: 294 IGLDEEAIIRCYRLMQQLISSNNVGRESTE 323
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 8/261 (3%)
Query: 92 LILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSL 151
L+ R + ++W+ +V + F LTA+L+VNY DRF+ +++ M QL+AVA LSL
Sbjct: 86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSL 145
Query: 152 AAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRL 211
AAK++ET VP LDLQV D KYVFE +TI+RMEL VL+ L+WRM VT SF D+ + +
Sbjct: 146 AAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKF 205
Query: 212 GLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLM 271
L R L+LS + F+ + PS +A + L ++E E + +
Sbjct: 206 NDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSM---FERVAT 262
Query: 272 GVLNISQQDKLKECYLLILELSRGNGSQNQSCKRKHFPLPGSPSCIIDANFSCDS--SND 329
N+ ++ L+ CY +I + QS F +P SP ++DA +C S S D
Sbjct: 263 CYKNLKKERVLR-CYEMIQDKIIMRNIMRQSAG-SVFSIPKSPIGVLDAA-ACISQQSED 319
Query: 330 SWPAASPFSSPPEPRFKRSRI 350
++ + + KR RI
Sbjct: 320 TFVGSPATNYESSASSKRRRI 340
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 16/242 (6%)
Query: 25 LFCDEESFEFEECCIDAETERCEEKESPLPPVLQEHDLFWDDNELLSLICKEKKENFVPS 84
L C E + + E +D E+P+ + + ++E + + EK++ +PS
Sbjct: 10 LLCTESNVDDEGMIVD---------ETPIEISIPQMGFSQSESEEIIMEMVEKEKQHLPS 60
Query: 85 DPI------SDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKP 138
D D L + R++ + W+ + F L LA+NY DRF+ H K
Sbjct: 61 DDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKG 120
Query: 139 WMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPV 198
W+ QL+AVACLSLAAK++ET+VP+L+DLQV DP++VFEAK++QRMELLVL+ L+WR+ +
Sbjct: 121 WILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAI 180
Query: 199 TPISFFDHIVRRLG-LKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQE 257
TP S+ + +R++ + R ++ S F+ + PS +A A L E
Sbjct: 181 TPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGE 240
Query: 258 VE 259
++
Sbjct: 241 LQ 242
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Query: 97 KEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVD 156
E V W+L+V++ GF TA LAV+Y DRF+ S S D W QL+ VACLSLAAK++
Sbjct: 126 SESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSL-PDHGWASQLLCVACLSLAAKME 184
Query: 157 ETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTH 216
E+ P LLDLQ++ +++FE +TIQRMEL+VL L WR+ VTP +F D ++G
Sbjct: 185 ESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGR 244
Query: 217 LHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQE 257
R ++LS I + F+ + S++A A +L + E
Sbjct: 245 SSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNE 285
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R + + W+ + F L LA+NY DRF+ H K W QL+AVACLSLAAK+
Sbjct: 69 RIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKI 128
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRL-GLK 214
+ET VP L+ LQV P +VFEAK++QRMELLVL+ L+WR+ VTP S+ + + ++ G
Sbjct: 129 EETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYD 188
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQE 257
H + R ++ S F+ + S +A A L E
Sbjct: 189 QEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGE 231
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 14/178 (7%)
Query: 75 KEKKENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQ 134
+ K++ P+ + AR+ V W LR A GF+ALTA LAV Y DR L + +
Sbjct: 57 RGKEDPLRPAADDDGYGGVSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALR 116
Query: 135 -KDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQV-----KDPK--YVFEAKTIQRMELL 186
D+PWM +L AVAC++LAAKV+ET+VP+LLDLQ+ DP YVFE KT++RMELL
Sbjct: 117 LGDRPWMARLAAVACVALAAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELL 176
Query: 187 VLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPS 244
VLS L WRM+PVTP+S+ ++ H L+ C+ LL+++ D R+ + PS
Sbjct: 177 VLSALGWRMHPVTPLSYLQPLL------GTAHAARLHHCDTALLALMPDWRWPRHRPS 228
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 94 LARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKD-KPWMGQLVAVACLSLA 152
LAR+ V+W+L + FGF TA LA+ YFDRF L + PW +L+AVAC+SLA
Sbjct: 107 LARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLA 166
Query: 153 AKVDETQVPLLLDLQ--VKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRR 210
AK++E + P L + + V D Y F I+RMELLVLSTL WRM VTP + + R
Sbjct: 167 AKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSR 226
Query: 211 L 211
L
Sbjct: 227 L 227
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 95 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDK-PWMGQLVAVACLSLAA 153
AR V+W+L + +FGF TA LA+ YFDRF L ++ PW +L+++AC+S+AA
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAA 158
Query: 154 KVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRL 211
K++E Q P L + + VF + +I+RMELLVLSTL WRM VTP F RL
Sbjct: 159 KMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRL 215
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 40 DAETERCEEKESPLPPVLQEHDLFWDDNELLSLICKEK-KENFVPSDPISDEILILARKE 98
D ER +++E + + D D L+ KE + +PS S ++A
Sbjct: 25 DETIERSDKQEPHFTTTIDDEDYVAD------LVLKENLRFETLPSKTTSSSDRLIA--- 75
Query: 99 VVEWVLRVKAHFGFTALTAILAVNYFDRFILSH--SFQKDKPWMGQLVAVACLSLAAKVD 156
++W+L + FGF TA +A++YFD F+ QKD+ W +L++VACLSLAAK++
Sbjct: 76 -IDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 157 ETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTH 216
E VP L +D +VF+ I++ ELL+LSTL W+MN +TP +F++ + ++ H
Sbjct: 135 ERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNH 193
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 17/261 (6%)
Query: 95 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAK 154
AR V W+++ A F F+ TA +AV Y DRF+ +DK W QL++VACLSLAAK
Sbjct: 99 ARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAK 158
Query: 155 VDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
V+E + P L + ++ +++ ++ RMELLVL+TL+W+M TP S+ + + +
Sbjct: 159 VEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAK--FR 212
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVL 274
+ R + + I + Y PST+A A +L + N E ++++ +
Sbjct: 213 HDERKAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSVVGSLW 272
Query: 275 NISQQDKLKECY-LLILELSRGNGSQNQSCKRKHFPLPGSPSCIIDANFSCDSSNDSWPA 333
+ CY ++++ R S + + S + S DS+
Sbjct: 273 QQLDTGHVYSCYNKMMIQEDRSMQSTTE--------VASSGVSVAHIGGSEDSAMGGANN 324
Query: 334 ASPFSSPPEPRFKRSRIHVQQ 354
A+ + P+ KR R+H Q
Sbjct: 325 ATTLEATPDK--KRKRLHSPQ 343
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 114/213 (53%), Gaps = 14/213 (6%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +W+++ ++ + T A N FDRF+ + WM +LVAV LS+A+K
Sbjct: 78 RFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKF 137
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGL-K 214
+E PLL +L+++ ++F T+ +MEL++L L+WR+N VT +F +V ++G+
Sbjct: 138 NEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVG 197
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVL 274
H+ + R + LL VI D + + Y PS +ATA + + E + C + +M +
Sbjct: 198 DHM---IMNRITNHLLDVICDLKMLQYPPSVVATAAIW-ILMEDKVC-----RESIMNLF 248
Query: 275 NISQQDKLKECYLLILELSRGNGSQNQSCKRKH 307
+ ++K+ +C ++ + +QS +R++
Sbjct: 249 EQNHKEKIVKC----VDGMKNRDIDHQSSRRRY 277
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 88 SDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVA 147
S L+ R + + + + F +LT LAVNY DRF+ S + KPW+ +L++++
Sbjct: 50 SSAFLLSNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSEDMPQSKPWILKLISLS 108
Query: 148 CLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHI 207
C+SL+AK+ + + + DL V+ F+A+ I+RME ++L L+WRM VTP SF
Sbjct: 109 CVSLSAKMRKPDMS-VSDLPVEGE--FFDAQMIERMENVILGALKWRMRSVTPFSFLAFF 165
Query: 208 VRRLGLKTH----LHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNP 263
+ LK L + L S+ D F+ + PS +A A +L E+ P
Sbjct: 166 ISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQF 225
Query: 264 VEHQNLLMGVLNISQQDKLKECYLLILELSRGNGSQNQSCKRKHFPLPGSPSCIIDANFS 323
N + ++ +D+L ECY I E G S + + ++D FS
Sbjct: 226 PCFSNRINQCTYVN-KDELMECYKAIQERDIIVGENEGSTE--------TAVNVLDQQFS 276
Query: 324 CDSSNDSWPAASPFSSPPEPRFKRSR 349
S+ S + SS P+ R +R
Sbjct: 277 SCESDKSITITA--SSSPKRRKTSTR 300
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 105 RVKA---HFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVP 161
R+KA G A TA A NY DRF+ + K + WM ++V+V CLSLA K+DE +P
Sbjct: 91 RLKAAMGRLGLEAATAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIP 150
Query: 162 LLLDLQVKDP-KYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWE 220
L DLQ+++ + F A TI+ MEL +L L+WR+ VTP SF +
Sbjct: 151 SLHDLQMEEAMGHSFRASTIRDMELTLLKALRWRLACVTPFSFLPVTTTTTTTRA----- 205
Query: 221 FLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVLNISQQD 280
LLL + D F+ + S LA + + T+ P +P H L + SQ D
Sbjct: 206 -------LLLRSLLDPSFLRFDASLLAASAL--TLSSTTPQHP-NHLLLNRLIHPFSQTD 255
Query: 281 -KLKECYLLI----LELSRGNG-SQNQSC 303
++KEC+ ++ L++S+ G S + C
Sbjct: 256 HEVKECFNMMKALHLDMSKNPGRSSDHPC 284
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 116 TAILAVNYFDRFILSHSFQKDK-PWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYV 174
A LA+NY DR++ ++ PW +L+A++CL+LAAK+ D+Q + +++
Sbjct: 78 VAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ-RGEEFM 136
Query: 175 FEAKTIQRMELLVLSTLQWRMNPVTPISFFD 205
F+ IQRME +VL+ L+WR VTP++F
Sbjct: 137 FDEAKIQRMEQMVLNALEWRTRSVTPLAFLG 167
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 78 KENFVPS----DPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSF 133
+EN++PS + EI+ RK V W+L V LA+NY DRF+ S
Sbjct: 35 EENYLPSPNYFKCVQKEIVPKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL---SV 91
Query: 134 QKDKPWMGQLVAVACLSLAAKVDETQVPLLLD-LQVKDPKYVFEAKTIQRMELLVLSTLQ 192
+ K QL+ C+ LA+K+ ET VPL + L + V + +Q MELL L+ L+
Sbjct: 92 EPTKKTRLQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSVRPGELLQ-MELLALNKLK 149
Query: 193 WRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATML 252
W + VTP F +H + +L + + + D F+ PS +A ++
Sbjct: 150 WDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDVNFIASPPSMIAAGSVA 209
Query: 253 HTIQ 256
+Q
Sbjct: 210 AAVQ 213
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 52 PLPPVLQEHDLFWDDNELLSLICKEKKENFVPS----DPISDEILILARKEVVEWVLRVK 107
P+ L + +L +DD L +L+ E E ++P + +I R+ V W+L V
Sbjct: 10 PMRRALPDPNLLYDDRVLHNLLTIE--ERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVC 67
Query: 108 AHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQ 167
LA+NY DRF+ + + QL+ C+ LA+K+ ET +PL +
Sbjct: 68 EEQKCEEEVFPLAMNYLDRFL---AVVPTRKCHLQLLGAVCMFLASKLKET-IPLTAEKL 123
Query: 168 VKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEH 227
+ + + EL+VL L+W + VTP F +HI+R+L L +
Sbjct: 124 CIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLVLIRKHAQT 183
Query: 228 LLLSVIADSRFMCYLPSTLATATMLHTI 255
+ D F Y PS +AT ++ I
Sbjct: 184 FIALCATDFNFAMYPPSMIATGSVGAAI 211
>sp|P24869|CG22_YEAST G2/mitotic-specific cyclin-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB2 PE=1 SV=1
Length = 491
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +V W++++ FG T LA+N DRF+ Q DK QLV +CL +A+K
Sbjct: 261 RDILVNWLVKIHNKFGLLPETLYLAINIMDRFLGKELVQLDKL---QLVGTSCLFIASKY 317
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKT 215
+E P + + E + I+ E +L TL++ +N P++F +RR+
Sbjct: 318 EEVYSPSIKHFASETDGACTEDE-IKEGEKFILKTLKFNLNYPNPMNF----LRRISKAD 372
Query: 216 HLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATML 252
+ + LL + D RF+ LPS A A M
Sbjct: 373 DYDIQSRTLAKFLLEISLVDFRFIGILPSLCAAAAMF 409
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 29 EESFEFEECCIDAETERCEEKESPLPPVLQEHDL--FWDDNELLSLICKEKKENFVPSDP 86
E++ + EE ID + C+ K +PL V HD+ F+ + E LS + N++ +
Sbjct: 151 EDADKEEEPVIDIDA--CD-KNNPLAAVEYIHDMHTFYKNFEKLSCV----PPNYMDNQQ 203
Query: 87 ISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAV 146
+E + R +++W++ V F T L +N DRF+ H + K QLV V
Sbjct: 204 DLNERM---RGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKL---QLVGV 257
Query: 147 ACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDH 206
L LA K +E VP++ DL + K + + + ME L+ +TLQ+ + TP F
Sbjct: 258 TALLLACKYEEVSVPVVDDLILISDK-AYSRREVLDMEKLMANTLQFNFSLPTPYVFMKR 316
Query: 207 IVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQ 256
++ L + E L+ + + YLPS LA A+ ++T Q
Sbjct: 317 FLKAAQSDKKLEILSFFMIELCLV----EYEMLEYLPSKLA-ASAIYTAQ 361
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 87 ISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAV 146
+ EIL RK V W+L V LA+NY DRF+ SF+ K QL+
Sbjct: 48 VQKEILPYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL---SFEPLKKSRLQLLGA 104
Query: 147 ACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDH 206
C+ +A+K+ ET +PL + + +MELL+++ L+W + +TP F +H
Sbjct: 105 TCMFVASKMKET-IPLTAEKLCIYTDNSIRPDELLQMELLLVNKLKWNLAAMTPHDFIEH 163
Query: 207 IVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQ 256
+ ++ L + + D +F+ PS +A +++ +Q
Sbjct: 164 FLTKMPLAEDTKQIIRKHAQTFVALCATDVKFISNPPSMIAAGSVVAAVQ 213
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 46 CEEKESPLPPVLQEHDLFWDDNELLSLICKEKKENFVPS----DPISDEILILARKEVVE 101
C E E P+ + + +L DD L +L+ E E ++P + +I R+ V
Sbjct: 5 CGEVE-PVRRAVPDANLLHDDRVLQNLLTIE--ERYLPQCSYFKCVQKDIQPYMRRMVAT 61
Query: 102 WVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVP 161
W+L V LA+NY DRF+ K QL+ C+ LA+K+ ET +P
Sbjct: 62 WMLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTHL---QLLGAVCMFLASKLKET-IP 117
Query: 162 LLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEF 221
L + + + + EL+VL L+W + VTP F +HI+R+L +
Sbjct: 118 LTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPSEKLSLI 177
Query: 222 LYRCEHLLLSVIADSRFMCYLPSTLATATMLHTI 255
+ + D +F Y PS +AT ++ I
Sbjct: 178 RKHAQTFIALCATDFKFAMYPPSMIATGSVGAAI 211
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 10/208 (4%)
Query: 52 PLPPVLQEHDLFWDDNELLSLICKEKKENFVPS----DPISDEILILARKEVVEWVLRVK 107
P+ +++ +L DD L +L+ E E ++P + +I R+ V W+L V
Sbjct: 10 PVRRAVRDRNLLRDDRVLQNLLTIE--ERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVC 67
Query: 108 AHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQ 167
LA+NY DRF+ K QL+ C+ LA+K+ ET PL +
Sbjct: 68 EEQKCEEEVFPLAMNYLDRFLAGVPTPKSHL---QLLGAVCMFLASKLKETS-PLTAEKL 123
Query: 168 VKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEH 227
+ + + EL+VL L+W + VTP F +HI+R+L + +
Sbjct: 124 CIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQT 183
Query: 228 LLLSVIADSRFMCYLPSTLATATMLHTI 255
+ D +F Y PS +AT ++ I
Sbjct: 184 FIALCATDFKFAMYPPSMIATGSVGAAI 211
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 52 PLPPVLQEHDLFWDDNELLSLICKEKKENFVPS----DPISDEILILARKEVVEWVLRVK 107
P+ + + +L DD L +L+ E E ++P + +I R+ V W+L V
Sbjct: 10 PVRRAVPDANLLHDDRVLQNLLTIE--ERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVC 67
Query: 108 AHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQ 167
LA+NY DRF+ K QL+ C+ LA+K+ ET +PL +
Sbjct: 68 EEQKCEEEVFPLAINYLDRFLAGVPTPKTHL---QLLGAVCMFLASKLKET-IPLTAEKL 123
Query: 168 VKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEH 227
+ + + EL+VL L+W + VTP F +HI+R+L + + + +
Sbjct: 124 CIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLP-QPNEKLSLIRKHAQ 182
Query: 228 LLLSVIA-DSRFMCYLPSTLATATMLHTI 255
+++ A D +F Y PS +AT ++ I
Sbjct: 183 TFIALCATDFKFAMYPPSMIATGSVGAAI 211
>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
Length = 292
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 62 LFWDDNELLSLICKEKKENFVPSDP----ISDEILILARKEVVEWVLRVKAHFGFTALTA 117
L D L SL+ E E +VP + EI RK + W+L V
Sbjct: 21 LLGDQRVLQSLLRLE--ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVF 78
Query: 118 ILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEA 177
LA+NY DR++ +K + QL+ C+ LA+K+ ET PL ++ +
Sbjct: 79 PLAMNYLDRYLSCVPTRKAQL---QLLGAVCMLLASKLRET-TPLTIEKLCIYTDHAVSP 134
Query: 178 KTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSR 237
+ ++ E+LVL L+W + V F I+ RL L + L D
Sbjct: 135 RQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYT 194
Query: 238 FMCYLPSTLATATMLHTIQEVEPCNPV--EHQNLLMGVLNISQQDKLKEC 285
F Y PS +AT ++ +Q + C+ E LL G+ ++ D L+ C
Sbjct: 195 FAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITG-TEVDCLRAC 243
>sp|P42524|CCNB_DICDI G2/mitotic-specific cyclin-B OS=Dictyostelium discoideum GN=cycB
PE=1 SV=1
Length = 436
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 19/294 (6%)
Query: 19 PLALDGLFCDEESFEFEECCIDAET--ERCEEKESPLPPVLQEHDLFWDDNELLSLICKE 76
P+ +D + D + E+ ID E + +S P + E+ NE+ + ++
Sbjct: 142 PVMIDDVDNDTNMIQEEQMVIDITEVPENIDIYDSHDPQCVGEYV-----NEIFAYYREK 196
Query: 77 KKENFVPSDPISDEILILARKE--VVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQ 134
++ + + D I ++ I R +V+W++ V F + T L+VN DR++
Sbjct: 197 EQIDKIDKDYIKNQYHINERMRAILVDWMMAVHVRFKLLSETFFLSVNIVDRYLAKVMIP 256
Query: 135 KDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWR 194
K QLV + + LA K +E P + D A+ I ME +LSTLQ+
Sbjct: 257 VTKL---QLVGITAILLACKYEEIYSPQIKDFVHTSDDACTHAEVID-MERQILSTLQFH 312
Query: 195 MNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHT 254
M+ TP+ F + G + H Y E LS++ + R + ++PS +A A++
Sbjct: 313 MSVATPLHFLRRFSKAAGSDSRTHSLSKYLSE---LSMV-EYRMVQFVPSMIAAASIYVA 368
Query: 255 IQEVEPCNPVEHQNLLMGVLNISQQDKLKECYLLILELSRGNGSQNQSCKRKHF 308
+ P + N+ + ++ ++ +C + E+ + + N RK +
Sbjct: 369 RRMTMKSGP--YWNVTLEYYTCYKESEILQCAQELKEVRKRADTSNLKATRKKY 420
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 20/234 (8%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +V+W++ V F T L VN DRF+ + + K QLV + + LA K
Sbjct: 103 RAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKL---QLVGLVAMLLACKY 159
Query: 156 DETQVPLLLDL-QVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
+E VP++ DL + D Y K I ME L+L+TLQ+ M+ T F ++
Sbjct: 160 EEVSVPVVSDLIHIADRAYT--RKDILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQAD 217
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVL 274
L + + LS++ M P +L A ++T Q + +H N
Sbjct: 218 KKLELVAFFLVD---LSLVEYE--MLKFPPSLVAAAAVYTAQCT--VSGFKHWNKTCEWH 270
Query: 275 NISQQDKLKECYLLILELSRGNGSQN-QSCKRKH------FPLPGSPSCIIDAN 321
+D+L EC +L++ + G+ RK+ F P+C + N
Sbjct: 271 TNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLEN 324
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 87 ISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAV 146
+ EIL RK V W+L V LA+NY DRF+ +K W+ QL+
Sbjct: 46 VQKEILPNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEPLRKS--WL-QLLGA 102
Query: 147 ACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDH 206
C+ LA+K+ ET +PL + + MEL VL+ L+W + VTP F +H
Sbjct: 103 TCMFLASKMKET-IPLTAEKLCIYTDNSIRPDELLIMELRVLNKLKWDLASVTPHDFIEH 161
Query: 207 IVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQ 256
+ ++ L + + D F+ PS +A ++ +Q
Sbjct: 162 FLNKMPLTEDTKQIIRKHAQTFVALCATDVNFISNPPSMIAAGSVAAAVQ 211
>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
Length = 292
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 62 LFWDDNELLSLICKEKKENFVPSDP----ISDEILILARKEVVEWVLRVKAHFGFTALTA 117
L D L SL+ E E +VP + EI RK + W+L V
Sbjct: 21 LLGDQRVLQSLLRLE--ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVF 78
Query: 118 ILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEA 177
LA+NY DR++ +K + QL+ C+ LA+K+ ET PL ++ +
Sbjct: 79 PLAMNYLDRYLSCVPTRKAQL---QLLGAVCMLLASKLRET-TPLTIEKLCIYTDHSVSP 134
Query: 178 KTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSR 237
+ ++ E+LVL L+W + V F I+ RL L + L D
Sbjct: 135 RQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYT 194
Query: 238 FMCYLPSTLATATMLHTIQEVEPCNPV--EHQNLLMGVLNISQQDKLKEC 285
F Y PS +AT ++ +Q + C+ E LL G+ ++ D L+ C
Sbjct: 195 FAMYPPSMIATGSIGAAVQGLGACSTSGDELTELLAGIAG-TEVDCLRAC 243
>sp|Q9Z2V9|CCNI_MOUSE Cyclin-I OS=Mus musculus GN=Ccni PE=2 SV=4
Length = 377
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 82 VPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMG 141
VP P + + R EV++W+ ++K F T LA + DRF+ + K P
Sbjct: 31 VPKIPTNQNVSPSQRDEVIQWLAKLKYQFNLYPETFALASSLLDRFLAT---VKAHPKYL 87
Query: 142 QLVAVACLSLAAK-VDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTP 200
+A++C LAAK V+E + +L + +D + I RME ++L L W ++ TP
Sbjct: 88 NCIAISCFFLAAKTVEEDEKIPVLKVLARDSFCGCSSSEILRMERIILDKLNWDLHTATP 147
Query: 201 ISFFDHIVRRLGLKTHLHWEF----LYRCEHL------LLSVIADSRFMCYLPSTLATAT 250
+ F HI + + F L +HL LL +A ++ + + S LA A
Sbjct: 148 LDFL-HIFHAIAVSARPQLLFSLPKLSPSQHLAVLTKQLLHCMACNQLLQFKGSMLALAM 206
Query: 251 MLHTIQEVEP 260
+ ++++ P
Sbjct: 207 VSLEMEKLIP 216
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 63 FWDDNELLSLICKEKKENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVN 122
F+ +NE +S + + +++ S +E + R +++W++ V F T L VN
Sbjct: 161 FYRENEEMSCV----QPDYMSSQGDINEKM---RAILIDWLIEVHHKFELMDETLFLTVN 213
Query: 123 YFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQR 182
DRF+ + K QLV V + LA K +E VP++ DL + + + I
Sbjct: 214 IVDRFLEKQVVPRKKL---QLVGVTAMLLACKYEEVAVPVVEDLVLISDR-AYTKGQILE 269
Query: 183 MELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYL 242
ME L+L+TLQ+ M+ TP F ++ L + E LS++ + + + Y
Sbjct: 270 MEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFILE---LSLV-EYQMLKYR 325
Query: 243 PSTLATATMLHTIQ 256
PS LA A ++T Q
Sbjct: 326 PSLLAAAA-VYTAQ 338
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 63 FWDDNELLSLICKEKKENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVN 122
F+ +NE +S + + +++ S +E + R +++W++ V F T L VN
Sbjct: 161 FYRENEEMSCV----QPDYMSSQGDINEKM---RAILIDWLIEVHHKFELMDETLFLTVN 213
Query: 123 YFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQR 182
DRF+ + K QLV V + LA K +E VP++ DL + + + I
Sbjct: 214 IVDRFLEKQVVPRKKL---QLVGVTAMLLACKYEEVAVPVVEDLVLISDR-AYTKGQILE 269
Query: 183 MELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYL 242
ME L+L+TLQ+ M+ TP F ++ L + E LS++ + + + Y
Sbjct: 270 MEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFILE---LSLV-EYQMLKYR 325
Query: 243 PSTLATATM 251
PS LA A +
Sbjct: 326 PSLLAAAAV 334
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 20/234 (8%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +V+W++ V F T L VN DRF+ + + K QLV + + LA K
Sbjct: 209 RAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKL---QLVGLVAMLLACKY 265
Query: 156 DETQVPLLLDL-QVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
+E VP++ DL + D Y K I ME L+L+TLQ+ M+ T F ++
Sbjct: 266 EEVSVPVVSDLIHIADRAYT--RKDILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQAD 323
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEPCNPVEHQNLLMGVL 274
L + + LS++ M P +L A ++T Q + +H N
Sbjct: 324 KKLELVAFFLVD---LSLVEYE--MLKFPPSLVAAAAVYTAQCT--VSGFKHWNKTCEWH 376
Query: 275 NISQQDKLKECYLLILELSRGNGSQN-QSCKRKH------FPLPGSPSCIIDAN 321
+D+L EC +L++ + G+ RK+ F P+C + N
Sbjct: 377 TNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLEN 430
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +++W++ V + T L VNY DR++ S + K QL+ VACL +A+K
Sbjct: 118 RAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVINRRK---MQLLGVACLLIASKY 174
Query: 156 DETQVPLLLDL-QVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGL- 213
+E P + +L + D Y + + +ME VL L++ M T F +R +
Sbjct: 175 EEICPPQVEELCYISDNTYTKDE--VLKMEASVLKYLKFEMTAPTTKCFLRRFLRAAQVC 232
Query: 214 --KTHLHWEFL--YRCEHLLLSVIADSRFMCYLPSTLATATML 252
LH EFL Y E LL + +CY+PS +A +++
Sbjct: 233 HEAPVLHLEFLANYIAELSLL----EYSLICYVPSLIAASSIF 271
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R+ V W+L V LA+NY DRF+ K QL+ C+ LA+K+
Sbjct: 55 RRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTH---LQLLGAVCMFLASKL 111
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKT 215
ET +PL + + + + EL+VL L+W + VTP F +HI+R+L +
Sbjct: 112 KET-IPLTAEKLCIYTDNSVKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQK 170
Query: 216 HLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTI 255
+ + D +F Y PS +AT ++ I
Sbjct: 171 EKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAI 210
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R+ V W+L V LA+NY DRF+ K QL+ C+ LA+K+
Sbjct: 55 RRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTH---LQLLGAVCMFLASKL 111
Query: 156 DETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKT 215
ET +PL + + + + EL+VL L+W + VTP F +HI+R+L +
Sbjct: 112 KET-IPLTAEKLCIYTDNSVKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQK 170
Query: 216 HLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTI 255
+ + D +F Y PS +AT ++ I
Sbjct: 171 EKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAI 210
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 17/221 (7%)
Query: 85 DPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLV 144
+ I ++ R +V+W++ V + + T LAV+Y DRF+ + K + QL+
Sbjct: 110 EKIQKDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRL---QLL 166
Query: 145 AVACLSLAAKVDETQVPLLLDL-QVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISF 203
V + +A+K +E P + D + D Y + I +ME +L LQ+ + T +F
Sbjct: 167 GVTSMLIASKYEEITPPNVDDFCYITDNTYT--KQEIVKMEADILLALQFELGNPTSNTF 224
Query: 204 ---FDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIQEVEP 260
F + + +HL EFL C +L + D + + +LPST+A + + +
Sbjct: 225 LRRFTRVAQEDFEMSHLQMEFL--CSYLSELSMLDYQSVKFLPSTVAASAVFLARFII-- 280
Query: 261 CNPVEHQ-NLLMGVLNISQQDKLKECYLLI--LELSRGNGS 298
P +H N+++ + LKEC +I L LSR G+
Sbjct: 281 -RPKQHPWNVMLEEYTRYKAGDLKECVAMIHDLYLSRKCGA 320
>sp|Q8WWL7|CCNB3_HUMAN G2/mitotic-specific cyclin-B3 OS=Homo sapiens GN=CCNB3 PE=1 SV=2
Length = 1395
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 34/189 (17%)
Query: 75 KEKKENFVPSDPISDEILILA--RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHS 132
KE++E F+ +D ++ +I I + R +V+W++ V+ F T T LAV D +++
Sbjct: 1138 KEREEQFILTDYMNRQIEITSDMRAILVDWLVEVQVSFEMTHETLYLAVKLVDLYLMKAV 1197
Query: 133 FQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYV----FEAKTIQRMELLVL 188
+KDK QL+ +AAK +E P +V D Y+ ++ + ME+ +L
Sbjct: 1198 CKKDK---LQLLGATAFMIAAKFEEHNSP-----RVDDFVYICDDNYQRSEVLSMEINIL 1249
Query: 189 STLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLAT 248
+ L+ +N PI++ H +RR RC H + + SR++C + T
Sbjct: 1250 NVLKCDIN--IPIAY--HFLRRYA-----------RCIHTNMKTLTLSRYICEM-----T 1289
Query: 249 ATMLHTIQE 257
H +QE
Sbjct: 1290 LQEYHYVQE 1298
>sp|Q14094|CCNI_HUMAN Cyclin-I OS=Homo sapiens GN=CCNI PE=1 SV=1
Length = 377
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAK- 154
R EV++W+ ++K F T LA + DRF+ + K P +A++C LAAK
Sbjct: 45 RDEVIQWLAKLKYQFNLYPETFALASSLLDRFLAT---VKAHPKYLSCIAISCFFLAAKT 101
Query: 155 VDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
V+E + +L + +D + I RME ++L L W ++ TP+ F HI + +
Sbjct: 102 VEEDERIPVLKVLARDSFCGCSSSEILRMERIILDKLNWDLHTATPLDFL-HIFHAIAVS 160
Query: 215 THLHWEF----LYRCEHL------LLSVIADSRFMCYLPSTLATATMLHTIQEVEP 260
T F L +HL LL +A ++ + + S LA A + ++++ P
Sbjct: 161 TRPQLLFSLPKLSPSQHLAVLTKQLLHCMACNQLLQFRGSMLALAMVSLEMEKLIP 216
>sp|P30284|CG21_EMENI G2/mitotic-specific cyclin-B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nimE
PE=2 SV=1
Length = 478
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +V+W++ V F T LAVN DRF+ + D+ QLV VA + +A+K
Sbjct: 241 RGILVDWLIEVHTRFRLLPETLFLAVNIIDRFLSAEVVALDRL---QLVGVAAMFIASKY 297
Query: 156 DETQVPLLLDL-QVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
+E P + + V D F K I E +L+TL++ M+ P++F +RR+
Sbjct: 298 EEVLSPHVANFSHVADE--TFSDKEILDAERHILATLEYNMSYPNPMNF----LRRISKA 351
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATM 251
+ + ++L+ + D RF+ Y S + A M
Sbjct: 352 DNYDIQTRTLGKYLMEISLLDHRFLGYPQSQIGAAAM 388
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 13/124 (10%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKD-KPWMGQLVAVACLSLAAK 154
R +++W+L V + T LA ++FDRF+L+ QKD M QL+ + L +A+K
Sbjct: 142 RSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLT---QKDINKNMLQLIGITSLFIASK 198
Query: 155 VDETQVPLLLDLQVKDPKYVFEA----KTIQRMELLVLSTLQWRMNPVTPISFFDHIVRR 210
++E P L + YV + + I RMEL++L L+W + PVT IS+ + ++
Sbjct: 199 LEEIYAPKLQEF-----AYVTDGACSEEDILRMELIILKALKWELCPVTIISWLNLFLQV 253
Query: 211 LGLK 214
LK
Sbjct: 254 DALK 257
>sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1
Length = 465
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 96 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKV 155
R +V+W++ V + A T LAVN+ DRF+ S + K QLV A + LA+K
Sbjct: 244 RTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKL---QLVGTAAMLLASKY 300
Query: 156 DETQVPLLLD-LQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLK 214
+E P + + + + D Y + + +ME L+L L + + T F +RR G+
Sbjct: 301 EEIYPPEVDEFVYITDDTYT--KRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVC 358
Query: 215 THLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATAT 250
Y E LS++ F+ YLPS +A A
Sbjct: 359 VRTENLAKYVAE---LSLLEADPFLKYLPSLIAAAA 391
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,570,910
Number of Sequences: 539616
Number of extensions: 5855035
Number of successful extensions: 12753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 12557
Number of HSP's gapped (non-prelim): 225
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)