BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017410
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55FN7|ODBB_DICDI 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1
Length = 370
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 264/324 (81%), Gaps = 3/324 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ AIN + IA++ D +A VFGEDVGFGGVFRCT GL D++G SRVFNTPLC
Sbjct: 44 GEKQKMNLFQAINNGMDIAMQKDSKAVVFGEDVGFGGVFRCTVGLRDKYGASRVFNTPLC 103
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGI GFAIGLAA G IAEIQFADYIFPAFDQIVNEAAK+RYRSG QF+CG LT+R+P
Sbjct: 104 EQGIAGFAIGLAAQGATPIAEIQFADYIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSP 163
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
YGAVGHGGHYHSQSPE++F H PGLKVVIP +P +AKGLLL+ IR+ +PV+FFEPK +YR
Sbjct: 164 YGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYR 223
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC-LDAEKEGISCELIDLK 273
+VEEVP DY +PL +A +++EG DIT++GWGAQ+ ++ QA + EK GISCELIDL+
Sbjct: 224 SAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEEKLGISCELIDLR 283
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
T+ PWD ETV SV+KTGR++ISHEAP TGG+ AEISA+I ERCFL LEAP+ RVCG DT
Sbjct: 284 TIQPWDVETVVESVKKTGRVVISHEAPKTGGWAAEISATIQERCFLHLEAPIQRVCGYDT 343
Query: 334 PFPLVFEPFYMPTKNKASCLESFK 357
PFPL+FE FY+P K ES K
Sbjct: 344 PFPLIFEKFYVPDHLKN--FESIK 365
>sp|P35738|ODBB_RAT 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3
Length = 390
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ +I AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 64 GQTQKMNLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 123
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP
Sbjct: 124 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAP 183
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 184 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 243
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLK 273
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+
Sbjct: 244 AAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLR 303
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
T++PWD +TV SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DT
Sbjct: 304 TIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDT 363
Query: 334 PFPLVFEPFYMPTKNKASCLESFK 357
PFP +FEPFY+P K K C ++ +
Sbjct: 364 PFPHIFEPFYIPDKWK--CYDALR 385
>sp|Q6P3A8|ODBB_MOUSE 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus
musculus GN=Bckdhb PE=2 SV=2
Length = 390
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ +I AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 64 GQTQKMNLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 123
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP
Sbjct: 124 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAP 183
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 184 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 243
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLK 273
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+
Sbjct: 244 AAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLR 303
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
T++PWD +TV SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DT
Sbjct: 304 TIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDT 363
Query: 334 PFPLVFEPFYMPTKNKASCLESFK 357
PFP +FEPFY+P K K C ++ +
Sbjct: 364 PFPHIFEPFYIPDKWK--CYDALR 385
>sp|P21839|ODBB_BOVIN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos
taurus GN=BCKDHB PE=1 SV=2
Length = 392
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/324 (66%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ A+ AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 66 GQTQKMNLFQAVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 125
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P
Sbjct: 126 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSP 185
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVV+PRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 186 WGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 245
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLK 273
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+
Sbjct: 246 AAVEQVPVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVIDLR 305
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
T++PWD +TV SV KTGRLL+SHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DT
Sbjct: 306 TILPWDVDTVCKSVIKTGRLLVSHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDT 365
Query: 334 PFPLVFEPFYMPTKNKASCLESFK 357
PFP +FEPFY+P K K C ++ +
Sbjct: 366 PFPHIFEPFYIPDKWK--CYDALR 387
>sp|P21953|ODBB_HUMAN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo
sapiens GN=BCKDHB PE=1 SV=2
Length = 392
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 261/324 (80%), Gaps = 3/324 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ ++ AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 66 GQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 125
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P
Sbjct: 126 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSP 185
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 186 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 245
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLK 273
+ EEVP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+
Sbjct: 246 AAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLR 305
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
T+IPWD +T+ SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DT
Sbjct: 306 TIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDT 365
Query: 334 PFPLVFEPFYMPTKNKASCLESFK 357
PFP +FEPFY+P K K C ++ +
Sbjct: 366 PFPHIFEPFYIPDKWK--CYDALR 387
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 160/311 (51%), Positives = 205/311 (65%), Gaps = 2/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+N+AL + DPR V GEDVG GGVF T GL ++G RV +TPL E I
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+AA G R +AEIQFADYIFP FDQ+V++ AK RYRSG QF L VR P G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR E
Sbjct: 123 VRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE+DY LP+ +A + REG D+TL+G+G + + QA + K G+S E++DL+TL+PW
Sbjct: 183 EVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPW 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D E V SV KTGR+++ +AP F +E++A+I E L AP RV G DTP+P
Sbjct: 243 DYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302
Query: 339 FEPFYMPTKNK 349
+ Y+PT +
Sbjct: 303 QDKLYLPTVTR 313
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 204/311 (65%), Gaps = 2/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+N+AL + DPR V GEDVG GGVF T GL ++G RV +TPL E I
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+AA G R +AEIQFADYIFP FDQ+V++ AK RYRSG QF L VR P G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR E
Sbjct: 123 VRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE+DY L + +A + REG D+TL+G+G + + QA + K G+S E++DL+TL+PW
Sbjct: 183 EVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPW 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D E V SV KTGR+++ +AP F +E++A+I E L AP RV G DTP+P
Sbjct: 243 DYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302
Query: 339 FEPFYMPTKNK 349
+ Y+PT +
Sbjct: 303 QDKLYLPTVTR 313
>sp|Q9I1M1|ODBB_PSEAE 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA2 PE=3 SV=1
Length = 350
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 208/324 (64%), Gaps = 21/324 (6%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
S+ + A+ A+ I LE D VFG+DVG FGGVFRCT GL ++G SRVF+ P+ E G
Sbjct: 16 SMTMIQALRSAMDIMLERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESG 75
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I+G A+G+ A G R + EIQFADY++PA DQ+++EAA+ RYRS F +TVR P G
Sbjct: 76 IIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIV-PMTVRMPCGG 134
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY---- 213
+GG HSQSPEA F V GL+ V+P +P AKGLL++CI + +PV+F EPK LY
Sbjct: 135 GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPF 194
Query: 214 ------------RLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAE 261
+ +VP+ Y +PL +A ++R G+ +T++ +G + + + A A+
Sbjct: 195 DGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAA---AD 251
Query: 262 KEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRL 321
+ G+ E+IDL++L P D ET+ ASV+KTGR +I+HEA T GFGAE+ + + E CF L
Sbjct: 252 ETGLDAEIIDLRSLWPLDLETIVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHL 311
Query: 322 EAPVARVCGLDTPFPLVFEPFYMP 345
EAP+ RV G DTP+P E Y P
Sbjct: 312 EAPIERVTGWDTPYPHAQEWAYFP 335
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/321 (47%), Positives = 206/321 (64%), Gaps = 7/321 (2%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
++ AIN A+ +E D R +V GEDVG GGVF+ T GL ++FG+ RV +TPL E I
Sbjct: 4 MSYIDAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G IG A G R IAE+QFAD+I PA +QI++EAAK RYRS N ++C + VRAPYG
Sbjct: 64 AGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCP-IVVRAPYGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HG YHSQS EA F + PGLK+V+P +P AKGLL + +RD +PV+FFE K YRL
Sbjct: 123 VHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKG 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVP DDY+LP+ +A+V REG DIT++ +G + QA EK+GIS ++DL+T+ P
Sbjct: 183 EVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPL 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLD---TPF 335
DKE + + KTG++L+ E G +E++A I E C L+AP+ R+ G D P+
Sbjct: 243 DKEAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPY 302
Query: 336 PLVFEPFYM--PTKNKASCLE 354
E ++M P K +A+ E
Sbjct: 303 APTMEKYFMVNPDKVEAAMRE 323
>sp|P09061|ODBB_PSEPU 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida
GN=bkdA2 PE=1 SV=1
Length = 339
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 205/328 (62%), Gaps = 21/328 (6%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
++ + A+ A+ + LE D V+G+DVG FGGVFRCT GL ++GKSRVF+ P+ E G
Sbjct: 5 TMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESG 64
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
IVG A+G+ A G R + EIQFADY +PA DQIV+E A+ RYRS +F LT+R P G
Sbjct: 65 IVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEF-IAPLTLRMPCGG 123
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
+GG HSQSPEA F V GL+ V+P +P AKGLL++ I +PV+F EPK LY
Sbjct: 124 GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPF 183
Query: 218 E----------------EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAE 261
+ VP+ Y +PL +A + R G+D++++ +G + + + A AE
Sbjct: 184 DGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVA---AE 240
Query: 262 KEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRL 321
+ G+ E+IDL++L P D +T+ SV+KTGR ++ HEA T GFGAE+ + + E CF L
Sbjct: 241 ESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHL 300
Query: 322 EAPVARVCGLDTPFPLVFEPFYMPTKNK 349
EAP+ RV G DTP+P E Y P ++
Sbjct: 301 EAPIERVTGWDTPYPHAQEWAYFPGPSR 328
>sp|P21874|ODPB_GEOSE Pyruvate dehydrogenase E1 component subunit beta OS=Geobacillus
stearothermophilus GN=pdhB PE=1 SV=2
Length = 325
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 196/321 (61%), Gaps = 5/321 (1%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQG 97
+ + AI AL I L+ DP +FGEDVG GGVFR T GL FG+ RVF+TPL E G
Sbjct: 3 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESG 62
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I G AIGLA G R + EIQF +++ D I + A+ RYR+G +++ +T+R+P+G
Sbjct: 63 IGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMP-ITIRSPFGG 121
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
H HS S E PGLKVVIP +P AKGLL+S IRD +PV+F E LYR
Sbjct: 122 GVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFR 181
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277
+EVPE +Y +P+ +A++ REG DIT++ +GA + +A + EKEGIS E++DL+T+ P
Sbjct: 182 QEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQP 241
Query: 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
D ET+ SV KTGR ++ EA G A + A I ER L LEAPV RV DT +P
Sbjct: 242 LDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPF 301
Query: 338 V-FEPFYMPTKNKASCLESFK 357
E ++P N +E+ K
Sbjct: 302 AQAESVWLP--NFKDVIETAK 320
>sp|P35488|ODPB_ACHLA Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma
laidlawii GN=pdhB PE=1 SV=1
Length = 327
Score = 275 bits (704), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 199/315 (63%), Gaps = 3/315 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ L AINQA+ A+E D VFGED GF GGVFR T GL ++G++RVF+TP+ E I
Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+A G + IAEIQF +IFP + +V AA+ R RS QF + +R P+G
Sbjct: 64 VGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVP-MVLRLPHGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
+HS++ E F +PGLKVV P +P AKGLLL+ I DP+PVVF EPK +YR +
Sbjct: 123 IRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQ 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVP + Y +P+ +A+V+++G+D+T+V WG+ + +E+A E EGIS E+IDL+T+ P
Sbjct: 183 EVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEIIDLRTISPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D+ET+ SV+KTG+ ++ EA + G AE+ + E+ F LEA R G D PL
Sbjct: 243 DEETILNSVKKTGKFMVVTEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVPLA 302
Query: 339 F-EPFYMPTKNKASC 352
E ++ P K +
Sbjct: 303 RGEHYHFPQPEKIAA 317
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 5/321 (1%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQG 97
+ + AIN AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E G
Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G
Sbjct: 63 IGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGG 121
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR
Sbjct: 122 GVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFR 181
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277
EEVPE++Y + + +A V +EG+DITL+ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 182 EEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQP 241
Query: 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
D +T+ ASV KTGR ++ EA G GA+++A + ER L LEAP+ARV DT +P
Sbjct: 242 IDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF 301
Query: 338 V-FEPFYMPTKNKASCLESFK 357
E ++P NK +E K
Sbjct: 302 TQAENVWLP--NKKDIIEQAK 320
>sp|Q5HQ75|ODPB_STAEQ Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3
SV=1
Length = 325
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 5/321 (1%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQG 97
+ + AIN AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E G
Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G
Sbjct: 63 IGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGG 121
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR
Sbjct: 122 GVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFR 181
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277
EEVPE++Y + + +A V +EG+DITL+ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 182 EEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQP 241
Query: 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
D +T+ ASV KTGR ++ EA G GA+++A + ER L LEAP+ARV DT +P
Sbjct: 242 IDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF 301
Query: 338 V-FEPFYMPTKNKASCLESFK 357
E ++P NK +E K
Sbjct: 302 TQAENVWLP--NKKDIIEQAK 320
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 243 DVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFT 302
Query: 339 -FEPFYMPTKN 348
E ++P KN
Sbjct: 303 QAENVWLPNKN 313
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 267 bits (683), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 188/312 (60%), Gaps = 3/312 (0%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQG 97
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R P+G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGG 121
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR
Sbjct: 122 GVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFR 181
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277
EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P
Sbjct: 182 EEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQP 241
Query: 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P
Sbjct: 242 IDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF 301
Query: 338 V-FEPFYMPTKN 348
E ++P KN
Sbjct: 302 TQAENVWLPNKN 313
>sp|Q6ABX8|ODPB_LEIXX Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=pdhB PE=3 SV=1
Length = 337
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 186/316 (58%), Gaps = 8/316 (2%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
+SL + A+N L AL DP+ + GEDVG GGVFR T GL FG SRV +TPL E
Sbjct: 15 QSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEA 74
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156
GIVG AIGLA G R + EIQF ++FP FDQI + AK R + + +R P+G
Sbjct: 75 GIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSMP-VVIRIPHG 133
Query: 157 AVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y
Sbjct: 134 --GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY- 190
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274
EV + LPL + ++R G+D T+V W + + +A A +EG S E++DL++
Sbjct: 191 WPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRAAEIAAEEGRSLEVVDLRS 250
Query: 275 LIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTP 334
L P D V SV+KTGRL+++ EAP G+E++A + E+ F LEAPV RV G DTP
Sbjct: 251 LAPIDYAPVLRSVQKTGRLVVAQEAPGIVSVGSEVAAVVGEKAFYSLEAPVLRVAGFDTP 310
Query: 335 FPLV-FEPFYMPTKNK 349
FP E Y+P ++
Sbjct: 311 FPPAKLESLYLPDADR 326
>sp|P21882|ODPB_BACSU Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus
subtilis (strain 168) GN=pdhB PE=3 SV=2
Length = 325
Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 193/318 (60%), Gaps = 5/318 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AI AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GL G R + EIQF +++ D + + A+ RYRSG ++ +T+R+P+G
Sbjct: 64 GGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSP-VTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ S E PG+KVVIP +P AKGLL+S IRD +PVVF E LYR +
Sbjct: 123 VHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQ 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
EVPE++Y + L +A+V REG+D++++ +GA + +A + EK+GIS E++DL+T+ P
Sbjct: 183 EVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPL 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ ASV KTGR ++ EA G A + A I +R L LEAPV RV DT FP
Sbjct: 243 DIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPFS 302
Query: 339 -FEPFYMPTKNKASCLES 355
E ++P N LE+
Sbjct: 303 QAESVWLP--NHKDVLET 318
>sp|O06160|BKDB_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit beta OS=Mycobacterium
tuberculosis GN=bkdB PE=1 SV=1
Length = 348
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 198/325 (60%), Gaps = 14/325 (4%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQ 96
+SL + AIN+AL+ A+ D R VFGEDV GGVFR T GLAD FG R F+TPL E
Sbjct: 24 QSLTMVQAINRALYDAMAADERVLVFGEDVAVEGGVFRVTEGLADTFGADRCFDTPLAES 83
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP-Y 155
I+G A+GLA G + EIQF + +PAFDQ+V+ AK+R R+ + + +TVR P +
Sbjct: 84 AIIGIAVGLALRGFVPVPEIQFDGFSYPAFDQVVSHLAKYRTRTRGEVDM-PVTVRIPSF 142
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR- 214
G +G H HS S E+++ H GLKVV+P +P A LL I P+PV++ EPK Y
Sbjct: 143 GGIGAAEH-HSDSTESYWVHTAGLKVVVPSTPGDAYWLLRHAIACPDPVMYLEPKRRYHG 201
Query: 215 --LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKE-GISCELID 271
+ PE P+ A V R G+D+T+V +G +S + AE++ S E+ID
Sbjct: 202 RGMVDTSRPEP----PIGHAMVRRSGTDVTVVTYGNLVSTALSSADTAEQQHDWSLEVID 257
Query: 272 LKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGL 331
L++L P D +T+ AS+++TGR ++ HE P + G+GA ++A I E F +LEAPV R CG
Sbjct: 258 LRSLAPLDFDTIAASIQRTGRCVVMHEGPRSLGYGAGLAARIQEEMFYQLEAPVLRACGF 317
Query: 332 DTPFPLV-FEPFYMPTKNK-ASCLE 354
DTP+P E ++P ++ C+E
Sbjct: 318 DTPYPPARLEKLWLPGPDRLLDCVE 342
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 231 bits (590), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 175/303 (57%), Gaps = 5/303 (1%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
K + + A+N AL + DP ++ GE+VG + G ++ + GL D++G RV +TP+ E
Sbjct: 41 KEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEA 100
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156
G G A+G A G R + E ++ A D I+N AAK Y S Q + + R P G
Sbjct: 101 GFTGIAVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVP-IVFRGPNG 159
Query: 157 AVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLS 216
A G HSQ A++ HVPGLKV++P S A+GLL + IRDP+PVVF E + LY S
Sbjct: 160 AAAGVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGES 219
Query: 217 V---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273
EV + + LP+ +A++ REG D+T+ + + QA KEGIS E+I+L+
Sbjct: 220 FPISAEVLDSSFALPIGKAKIEREGKDVTITAYSKMVGYALQAADILSKEGISAEVINLR 279
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
++ P D+ T+ ASVRKT RL+ E+ G GAEI S++E F L+APV R+ G D
Sbjct: 280 SIRPLDRATINASVRKTNRLVTIEESFPQHGIGAEICMSVVEESFEYLDAPVERIAGADV 339
Query: 334 PFP 336
P P
Sbjct: 340 PMP 342
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 185/338 (54%), Gaps = 14/338 (4%)
Query: 12 LSRRNLSTACANKQLIQQHDGGVGSG---------KSLNLYSAINQALHIALETDPRAYV 62
++RR L + CA QL+Q + K + + A+N AL + DP ++
Sbjct: 4 IARRRLGSGCALGQLMQALRPAAAAAAARTYSAAAKEMTVREALNSALDEEMSADPSVFL 63
Query: 63 FGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADY 121
GE+VG + G ++ + GL D++G RV +TP+ E G G +G A G R + E ++
Sbjct: 64 MGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGFTGIGVGAAYQGLRPVVEFMTFNF 123
Query: 122 IFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKV 181
A D I+N AAK Y S Q N + R P GA G HSQ A++ HVPGLKV
Sbjct: 124 SMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKV 182
Query: 182 VIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREG 238
+ P S A+GLL + IRDP+PVVF E + LY S EV + + LP+ +A++ +EG
Sbjct: 183 LTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEQEG 242
Query: 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHE 298
D+T+ + + QA KEGIS E+I+L+++ P D+ T+ ASVRKT RL+ E
Sbjct: 243 KDVTITAFSKMVGYALQAAEILSKEGISAEVINLRSIRPLDRATINASVRKTNRLVTLEE 302
Query: 299 APVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
G GAEI S++E F L+APV R+ G D P P
Sbjct: 303 GFPQHGVGAEICMSVVEDSFEYLDAPVERIAGADVPMP 340
>sp|P75391|ODPB_MYCPN Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhB PE=3 SV=1
Length = 327
Score = 228 bits (581), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 176/298 (59%), Gaps = 2/298 (0%)
Query: 41 NLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGIV 99
N A+ A+ +ALE DP ++G+D GF GGVFR T GL ++G+ RV++ P+ E +
Sbjct: 8 NNIEALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMA 67
Query: 100 GFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159
G +G A G + I EIQF+ + FPA QI AA+ R RS + C + VR P G
Sbjct: 68 GIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGI 126
Query: 160 HGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEE 219
+HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E
Sbjct: 127 KALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQE 186
Query: 220 VPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWD 279
+P D Y +P+ +A +I +G+++T+V +G + + E + ELIDL+T+ PWD
Sbjct: 187 IPADYYTVPIGQANLISQGNNLTIVSYGPTMFDLINMVYGGELKDKGIELIDLRTISPWD 246
Query: 280 KETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
KETV SV+KTGRLL+ EA T EI AS+ E F L+A RV G D PL
Sbjct: 247 KETVFNSVKKTGRLLVVTEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPL 304
>sp|P47515|ODPB_MYCGE Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhB PE=3 SV=1
Length = 326
Score = 227 bits (579), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 175/303 (57%), Gaps = 2/303 (0%)
Query: 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLC 94
S +N A+N A+ +ALE D ++G+D GF GGVFR T GL ++G RV++ P+
Sbjct: 2 SKIQVNNIEALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIA 61
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
E + G +G A G + I EIQF+ + FPA QI AA+ R RS + L VR P
Sbjct: 62 ENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVY-TAPLVVRMP 120
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR
Sbjct: 121 MGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYR 180
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274
+E+P D Y +P+ EA +I EGS++T+V +G + + E + ELIDL+T
Sbjct: 181 AFRQEIPSDYYTVPIGEANLISEGSELTIVSYGPTMFDLINLVYSGELKDKGIELIDLRT 240
Query: 275 LIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTP 334
+ PWDK+TV SV+KTGRLL+ EA + AEI S+ E F L+ RV G D
Sbjct: 241 ISPWDKQTVFNSVKKTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIV 300
Query: 335 FPL 337
PL
Sbjct: 301 VPL 303
>sp|O34591|ACOB_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Bacillus subtilis (strain 168) GN=acoB PE=3 SV=3
Length = 342
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 191/341 (56%), Gaps = 19/341 (5%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-------------FGGVFRCTTGLADRF 83
+ +++ AIN+A+ +A+ D + GEDV +GGV T GL F
Sbjct: 2 ARVISMSDAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEF 61
Query: 84 GKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ 143
G++RV +TP+ E G +G A+ A+ G R IAE+ F D+I FDQ++N+ AKFRY G +
Sbjct: 62 GRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGK 121
Query: 144 FNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNP 203
+TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +P
Sbjct: 122 AQVP-ITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDP 180
Query: 204 VVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKE 263
V FFE K Y + EVPED Y +PL +A++ REG+D+TL G Q++ +A +
Sbjct: 181 VFFFEDKTSYNMK-GEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSER 239
Query: 264 GISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEA 323
GI E++D ++L P D++ + S+ KT RL+I EA +I+A + ++ F L+A
Sbjct: 240 GIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDA 299
Query: 324 PVARVCGLDTPFPL--VFEPFYMPTKNK--ASCLESFKVPA 360
P+ R+ TP P V E Y+PT +K + LE PA
Sbjct: 300 PIKRITAPHTPVPFSPVLEDQYLPTPDKIVSVTLELLGEPA 340
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 168/296 (56%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ A +E D V GEDVG +GG ++ T L ++G RV +TP+ E G
Sbjct: 6 MFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F L +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
PED+Y++PL +AEV+R+G DIT++ + + +A +G E++DL +L P D
Sbjct: 184 PEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDI 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
+++ SV+KT R+LI E T G GAE+ A I E F L+APV R+ D P P
Sbjct: 244 DSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTP 299
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 174/304 (57%), Gaps = 5/304 (1%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
K + + A+N A+ + DP+ +V GE+VG + G ++ T GL +++G RV++TP+ E
Sbjct: 33 AKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITE 92
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G G +G A G + + E ++ A D I+N AAK Y S Q N + R P
Sbjct: 93 AGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPN 151
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY
Sbjct: 152 GAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGE 211
Query: 216 SV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272
S EE + + LP+ +A++ REG D+T+V + + +A +EGIS E+I+L
Sbjct: 212 SFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINL 271
Query: 273 KTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLD 332
+++ P D+ T+ ASVRKT RL+ E G AEI AS++E F L+APV R+ G D
Sbjct: 272 RSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGAD 331
Query: 333 TPFP 336
P P
Sbjct: 332 VPMP 335
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 171/296 (57%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ +A ++ D ++ GEDVG +GG ++ T L ++G RV +TP+ E +G
Sbjct: 6 MFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F + +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L +E+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DEL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
P D+Y LPL +AE++R+G D+T++ + + QA +D +G + E+IDL +L P D
Sbjct: 184 PNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDI 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
++ S+ KT +L+I E TGG GAEI A I + F L+AP+ R+ D P P
Sbjct: 244 TSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTP 299
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 221 bits (564), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 167/296 (56%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ A + DP V GEDVG +GG ++ T L ++G RV +TP+ E G
Sbjct: 6 MFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F L +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
P+++Y LPL++ E +R+G DIT++ + + QA KEG E+IDL +L P D
Sbjct: 184 PQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDI 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
+++ SV+KT ++LI E T G GAE+ A I E F L+APV R+ D P P
Sbjct: 244 DSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTP 299
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 221 bits (562), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 176/312 (56%), Gaps = 5/312 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFD 181
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
VP+ +P S+A++++EGS++T+V + Q+ + + + I CELIDL+T+ P
Sbjct: 182 -VPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPL 240
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +++ SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P
Sbjct: 241 DTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYA 300
Query: 339 --FEPFYMPTKN 348
E MP+ N
Sbjct: 301 VNLEKLAMPSAN 312
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 178/319 (55%), Gaps = 3/319 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCP-IVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S +
Sbjct: 122 SRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFD 181
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
VPE +P +A+++REGS +T+V + Q+ + A + + I CE+IDL+T+ P
Sbjct: 182 -VPETIEPIPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPL 240
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P
Sbjct: 241 DTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFA 300
Query: 339 FEPFYMPTKNKASCLESFK 357
+ +++ +E+ K
Sbjct: 301 VNLEKLALPSESDVIEAVK 319
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 175/322 (54%), Gaps = 6/322 (1%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
++ + A+ A+ + + +V GE+V + G ++ T GL FG RV +TP+ E G
Sbjct: 137 TMTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHG 196
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
G +G A G R I E ++ A DQI+N AAK Y SG Q + R P GA
Sbjct: 197 FAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGA 255
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S
Sbjct: 256 AARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSF 315
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277
E DD++LP+ +A + R G D TLV +G ++ +A + E +GI E+IDL+T+ P
Sbjct: 316 EVPKLDDFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIRP 375
Query: 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337
D TV SV+KTGRL+ E G EI+ ++++ F L+AP+ + G D P P
Sbjct: 376 MDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPY 435
Query: 338 V--FEPFYMPTKNKASCLESFK 357
E +P N A +++ K
Sbjct: 436 AANLEKLALP--NVAEVVDAVK 455
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 178/319 (55%), Gaps = 3/319 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S +
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFD 181
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
VP+ +P +A+++REGS +T+V + Q+ + A + + I CE+IDL+T+ P
Sbjct: 182 -VPKTIEPIPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPL 240
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D ET+ SV+KT RL++ E G GA I++ +++ F L+AP+ V G D P P
Sbjct: 241 DTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYA 300
Query: 339 FEPFYMPTKNKASCLESFK 357
+ +++ +E+ K
Sbjct: 301 VNLETLALPSESDVIEAVK 319
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 170/296 (57%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
LY A+N+ +H +E DP+ +V GED+G +GG ++ T GL +++G R+ +TP+ E G
Sbjct: 6 LYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A Y SG F L VR P G
Sbjct: 66 IAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTP-LVVRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
P+ +Y++PL +AE++R G+ IT++ + + QA ++G E+ID+ +L P D
Sbjct: 184 PQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDIISLKPLDM 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
T+ S+RKT ++LI E TGG G + ++ILE F L+ P+ + D P P
Sbjct: 244 GTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTP 299
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 176/305 (57%), Gaps = 9/305 (2%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
K + + AIN AL L D + ++ GE+V + G ++ T GL D++G R+ +TP+ E
Sbjct: 27 KEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEA 86
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ-FNCGGLTVRAPY 155
G G +G A G R I E ++ A D I+N +AK Y SG + FN + R P
Sbjct: 87 GFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNP--IVWRGPN 144
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR- 214
G G HSQ A++ VPGLKVV P S +GLL S IRD NPVV+ E + LY
Sbjct: 145 GPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNY 204
Query: 215 ---LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELID 271
LS +E + +Y++P+ +A+V REG D+T+VG+ +S +A KEGIS E+I+
Sbjct: 205 KFDLSDQE-QDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVIN 263
Query: 272 LKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGL 331
L+T+ P D ET+ S++KT +L+ E G GAEISA ++E F L+AP+ R+CG
Sbjct: 264 LRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGA 323
Query: 332 DTPFP 336
D P P
Sbjct: 324 DVPMP 328
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 174/312 (55%), Gaps = 5/312 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFD 181
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
VP+ +P S+A++++EGS++T+V + Q+ + + + I CELIDL+T+ P
Sbjct: 182 -VPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPL 240
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D + SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P
Sbjct: 241 DTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYA 300
Query: 339 --FEPFYMPTKN 348
E MP+ N
Sbjct: 301 VNLEKLAMPSAN 312
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 3/298 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
L +Y A+ +A+ + D R +V GEDVG +GG ++ T L ++G RV +TP+ E
Sbjct: 5 LFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSF 64
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G AIG A G + + E ++ AF+QI N A Y SG ++ L +R P G
Sbjct: 65 TGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIG 123
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L +
Sbjct: 124 KQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-Q 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
E+P+ +Y+LPL +A+V+REGSD+T++ + L + QA +G++ E+IDL +L P
Sbjct: 183 EIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPI 242
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
D ET+ SV KT + +I E TGG AE+ A I F L+AP+ R+ D P P
Sbjct: 243 DLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTP 300
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 3/332 (0%)
Query: 6 RRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGE 65
+ F L R+ N ++ D +G L L+ A+ + L ++ DP V GE
Sbjct: 52 KSFGSGLRVRHSQKLIPNAVATKEADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGE 111
Query: 66 DVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFP 124
DVG +GG ++ T GLAD+FG RV +TP+CE G IG A G R + E ++
Sbjct: 112 DVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLL 171
Query: 125 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIP 184
AF+QI N Y SG QF + +R P G G HSQ E++F +PG+++V
Sbjct: 172 AFNQISNNCGMLHYTSGGQFTIP-VVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVAC 230
Query: 185 RSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 244
+P AKGL+ + IR NPV+ FE LY L E++P++DY+ L EAE++R G IT++
Sbjct: 231 STPYNAKGLMKAAIRSENPVILFEHVLLYNLK-EKIPDEDYVCNLEEAEMVRPGEHITIL 289
Query: 245 GWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGG 304
+ + QA +G E+ID+++L P+D T+ SV+KT R+LI E TGG
Sbjct: 290 TYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGG 349
Query: 305 FGAEISASILERCFLRLEAPVARVCGLDTPFP 336
GA ++A+I E L+APV + D P P
Sbjct: 350 IGASLTAAINENFHDYLDAPVMCLSSQDVPTP 381
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 180/328 (54%), Gaps = 15/328 (4%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ A D IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCP-IVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY S +
Sbjct: 122 SRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFD 181
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW 278
+ E+ +P +A+V++EG +T+V + Q+ + A + + I+CE+IDL+T+ P
Sbjct: 182 -ISENVEPIPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPL 240
Query: 279 DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338
D +T+ SV+KTGRL++ E G GA I+A +++ F L+APV V G D P P
Sbjct: 241 DIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPY- 299
Query: 339 FEPFYMPTKNKASCLESFKVPAQHCCMN 366
A LE +P+++ +N
Sbjct: 300 -----------AVNLEKLALPSEYDVIN 316
>sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Arabidopsis thaliana GN=E1-BETA-2 PE=1 SV=1
Length = 406
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 168/301 (55%), Gaps = 3/301 (0%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
G L L+ A+ + L ++ DP V GEDVG +GG ++ T GLAD+FG RV +TP+CE
Sbjct: 83 GHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICE 142
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G IG A G R + E ++ AF+QI N Y SG QF + +R P
Sbjct: 143 NAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIP-VVIRGPG 201
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
G G HSQ E++F +PG+++V +P AKGL+ + IR NPV+ FE LY L
Sbjct: 202 GVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL 261
Query: 216 SVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275
E +P+++Y+ L EAE++R G IT++ + + QA +G E+ID+++L
Sbjct: 262 K-ESIPDEEYICNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSL 320
Query: 276 IPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF 335
P+D T+ SV+KT R+LI E TGG GA ++A+I E L+APV + D P
Sbjct: 321 KPFDLYTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSSQDVPT 380
Query: 336 P 336
P
Sbjct: 381 P 381
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 169/296 (57%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ Q L ++ DPR V GEDVG +GG ++ T G A+R+G R+ +TP+ E G
Sbjct: 6 LFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R + E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NP++ FE LY L E++
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLK-EDL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
E++Y++ L +AEV+R G+DIT++ + + QA +G E+ID+ +L P+D
Sbjct: 184 AEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEIIDIVSLKPFDL 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
T+ ASV KT ++LI E TGG GA + A+I+E F L+AP+ + D P P
Sbjct: 244 GTIGASVCKTHKVLIVEECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPTP 299
>sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 359
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 169/303 (55%), Gaps = 5/303 (1%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
K + + A+N AL + + D + ++ GE+VG + G ++ T GL +++G RV +TP+ E
Sbjct: 24 KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEA 83
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156
G G +G A G + + E ++ A D I+N AAK Y S Q + + R G
Sbjct: 84 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVP-IVFRGLNG 142
Query: 157 AVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLS 216
G HS +++ PGLKV++P S A+GLL + IRDP+PVVF E + LY S
Sbjct: 143 DAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGES 202
Query: 217 V---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273
EV + + LP+ +A++ REG D+T+ + + +A EKEGIS E+I+L+
Sbjct: 203 FPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLR 262
Query: 274 TLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT 333
++ P D+ T+ ASVRKT RL+ E G GAEI S++E F L+A V R+ G D
Sbjct: 263 SIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADV 322
Query: 334 PFP 336
P P
Sbjct: 323 PMP 325
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 166/296 (56%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ AL ++ DP V GEDVG +GG ++ T G +++G R+ +TP+ E G
Sbjct: 6 LFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P KGLL S IR+ NPV+FFE LY L+ E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYNLN-ENL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
E +Y+L L +AEV+R G+DIT++ + + QA +G E+ID+ +L P D
Sbjct: 184 IEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDM 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
T+ SVRKT ++LI E TGG GA + A+ILE F L+AP+ + D P P
Sbjct: 244 GTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTP 299
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 168/296 (56%), Gaps = 3/296 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ + L ++ DP+ V GEDVG +GG ++ T G A+++G R+ +TP+ E G
Sbjct: 6 LFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R + E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NPV+ FE LY L E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK-ETI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK 280
P+++Y++ L +AE++R G+DIT++ + + QA +G E+ID+ +L P D
Sbjct: 184 PDNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEIIDIVSLKPVDL 243
Query: 281 ETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 336
T+ S++KT ++LI E TGG GA + A+I+E F L+AP+ + D P P
Sbjct: 244 GTISTSIKKTHKVLIVEECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQDVPTP 299
>sp|P27746|ACOB_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoB PE=1 SV=3
Length = 338
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 177/322 (54%), Gaps = 16/322 (4%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDV-----------GFGGVFRCTTGLADRFGKS 86
+ L++ AIN+A+ + DP + GED+ +GGV T GL + G
Sbjct: 3 RKLSIKLAINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHG-D 61
Query: 87 RVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNC 146
R+ +TPL E VG AIG AA G R IAE+ F D++ FDQI N+AAKFRY G +
Sbjct: 62 RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAET 121
Query: 147 GGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206
+ +RA GA HSQ F H+PGLKVV P +P KGLL+ IRD +PV+F
Sbjct: 122 P-VVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIF 180
Query: 207 FEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGIS 266
E K LY L EVPE Y +P EA ++R+G D+++V +G + +A KEGI
Sbjct: 181 CEHKNLYGLE-GEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGIE 239
Query: 267 CELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVA 326
E++DL+TL P D +TV SV TGRL++ EA +ISA + ++ F L+A +
Sbjct: 240 AEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIE 299
Query: 327 RVCGLDTPFPL--VFEPFYMPT 346
VC TP P E Y+P+
Sbjct: 300 MVCPPHTPVPFSPTLEDLYIPS 321
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 177/318 (55%), Gaps = 10/318 (3%)
Query: 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLC 94
S K++ + A+N A+ L+ D ++ GE+V + G ++ + GL DRFG+ RV +TP+
Sbjct: 35 STKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPIT 94
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
E G G A+G A G + I E ++ A D +VN AAK Y SG C + R P
Sbjct: 95 EYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKC-QMVFRGP 153
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
GA G HSQ ++ +PGLKV++P S A+GLL + IRDPNPVVF E + LY
Sbjct: 154 NGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYG 213
Query: 215 LSV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI-MEQACLDAEKEGISCELI 270
S EE ++ LP +A++ REG+DI++V + + +E A + +K G+S E+I
Sbjct: 214 ESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVI 272
Query: 271 DLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVC 329
+L+++ P D E + +V+KT L+ + G GAEI A ++E F L+AP+ RV
Sbjct: 273 NLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVT 332
Query: 330 GLDTPFPLV--FEPFYMP 345
G D P P E F P
Sbjct: 333 GADVPTPYAKELEDFAFP 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,171,114
Number of Sequences: 539616
Number of extensions: 6274762
Number of successful extensions: 13716
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 356
Number of HSP's that attempted gapping in prelim test: 13075
Number of HSP's gapped (non-prelim): 625
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)