BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017411
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Query: 168 SLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AF 226
L R S E+ A+ NFS +LGRG V+KG++ T VA+KRL +E + + F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQF 82
Query: 227 CRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
E+ + S H N++ L GFC+ P + L L+Y Y++ GS+ L E+ + L W
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPES---QPPLDW 138
Query: 287 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 346
R ++ALG A +AYLH+ + ++HRD+K +NILL + + DFGLA
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX- 197
Query: 347 FLCKTVKGTFG 357
+ V+GT G
Sbjct: 198 HVXXAVRGTIG 208
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 22/194 (11%)
Query: 171 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLR--TSVAIKRLDKEDKESSKAFCR 228
R+ ++ AT+NF ++G G V+KG +LR VA+KR E + + F
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKG---VLRDGAKVALKRRTPESSQGIEEFET 84
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--- 285
E+ S HP++V L+GFC D + LIYKY+ G+L+RHL+ S LP
Sbjct: 85 EIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLY--------GSDLPTMS 135
Query: 286 --WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
W R ++ +G A + YLH R ++HRD+K NILL +PK+ DFG++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 344 SVPFLCKTVKGTFG 357
L VKGT G
Sbjct: 193 DQTHLXXVVKGTLG 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 22/194 (11%)
Query: 171 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLR--TSVAIKRLDKEDKESSKAFCR 228
R+ ++ AT+NF ++G G V+KG +LR VA+KR E + + F
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKG---VLRDGAKVALKRRTPESSQGIEEFET 84
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--- 285
E+ S HP++V L+GFC D + LIYKY+ G+L+RHL+ S LP
Sbjct: 85 EIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLY--------GSDLPTMS 135
Query: 286 --WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
W R ++ +G A + YLH R ++HRD+K NILL +PK+ DFG++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 344 SVPFLCKTVKGTFG 357
L VKGT G
Sbjct: 193 GQTHLXXVVKGTLG 206
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 167 NSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV--GLLRTSVAIKRLDKEDKESSK 224
L R S E+ A+ NF +LGRG V+KG++ G L VA+KRL +E + +
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXL---VAVKRLKEERTQGGE 71
Query: 225 -AFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST 283
F E+ + S H N++ L GFC+ P + L L+Y Y++ GS+ L E+ +
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPES---QPP 127
Query: 284 LPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
L W R ++ALG A +AYLH+ + ++HRD+K +NILL + + DFGLA
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 172 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 221
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 127
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 342 APSVPFLCKTVKGT 355
+ + + GT
Sbjct: 185 KFAQTVMXXRIVGT 198
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 172 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 221
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 127
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 342 APSVPFLCKTVKGT 355
+ + + GT
Sbjct: 185 KFAQTVMXSRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 172 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 221
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 66
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 121
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 342 APSVPFLCKTVKGT 355
+ + + GT
Sbjct: 179 KFAQXVMXXRIVGT 192
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
V+GRGA V K K VAIK+++ E + KAF EL S ++HPNIV L G C
Sbjct: 16 VVGRGAFGVVCKAK--WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV---ALGIAESVAYLHN 305
++P + L+ +Y GGSL LH G LP+ L ++ VAYLH+
Sbjct: 72 LNP---VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 306 GTERCVVHRDIKPSNILL-SSKKIPKLCDFGLA 337
+ ++HRD+KP N+LL + + K+CDFG A
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
V+GRGA V K K VAIK+++ E + KAF EL S ++HPNIV L G C
Sbjct: 15 VVGRGAFGVVCKAK--WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV---ALGIAESVAYLHN 305
++P + L+ +Y GGSL LH G LP+ L ++ VAYLH+
Sbjct: 71 LNP---VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 306 GTERCVVHRDIKPSNILL-SSKKIPKLCDFGLA 337
+ ++HRD+KP N+LL + + K+CDFG A
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 172 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 221
S+ E+ T+NF + G G G V+KG V T+VA+K+L D +E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 63
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F +E+ + + H N+V L+GF D + L L+Y Y GSL L + G
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDD-LCLVYVYXPNGSLLDRL----SCLDGT 118
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
L W R K+A G A + +LH E +HRDIK +NILL K+ DFGLA
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPNIVPLVGFCID 250
GA SF + + VA+K L ++D E F RE+ I L HPNIV +G
Sbjct: 46 GAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 251 PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERC 310
P L ++ +Y+S GSL R LH K G R L R +A +A+ + YLHN
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLH--KSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 311 VVHRDIKPSNILLSSKKIPKLCDFGLA 337
+VHRD+K N+L+ K K+CDFGL+
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 22/160 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRL-------DKEDKESSKAFCRELMIASSLHHPNIV 242
+G+G V KG++ ++ VAIK L + E E + F RE+ I S+L+HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L G +P + ++ ++V G L L +K ++ WSV+ ++ L IA + Y
Sbjct: 87 KLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRLMLDIALGIEY 137
Query: 303 LHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFGLA 337
+ N +VHRD++ NI L S + P K+ DFGL+
Sbjct: 138 MQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 184 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLHH 238
+ +VLG GA V+KG + ++ VAIK L++ +++ F E +I +S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
P++V L+G C+ P + L+ + + G L ++HE K + L W V+ IA+
Sbjct: 77 PHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAK 128
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ YL ER +VHRD+ N+L+ S K+ DFGLA
Sbjct: 129 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPNIVPLVGFCID 250
GA SF + + VA+K L ++D E F RE+ I L HPNIV +G
Sbjct: 46 GAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 251 PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERC 310
P L ++ +Y+S GSL R LH K G R L R +A +A+ + YLHN
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLH--KSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 311 VVHRDIKPSNILLSSKKIPKLCDFGLA 337
+VHR++K N+L+ K K+CDFGL+
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLH 237
+ +VLG GA V+KG + ++ VAIK L++ +++ F E +I +S+
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HP++V L+G C+ P + L+ + + G L ++HE K + L W V+ IA
Sbjct: 99 HPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IA 150
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + YL ER +VHRD+ N+L+ S K+ DFGLA
Sbjct: 151 KGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 22/158 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRL-------DKEDKESSKAFCRELMIASSLHHPNIV 242
+G+G V KG++ ++ VAIK L + E E + F RE+ I S+L+HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L G +P + ++ ++V G L L +K ++ WSV+ ++ L IA + Y
Sbjct: 87 KLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRLMLDIALGIEY 137
Query: 303 LHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFG 335
+ N +VHRD++ NI L S + P K+ DFG
Sbjct: 138 MQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRL-------DKEDKESSKAFCRELMIASSLHHPNIV 242
+G+G V KG++ ++ VAIK L + E E + F RE+ I S+L+HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L G +P + ++ ++V G L L +K ++ WSV+ ++ L IA + Y
Sbjct: 87 KLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRLMLDIALGIEY 137
Query: 303 LHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFGLA 337
+ N +VHRD++ NI L S + P K+ DF L+
Sbjct: 138 MQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKDLYKDFLTLEHL 146
Query: 300 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRL---DKEDKESSKAFCRELMIASSLHHPNIVPLVG 246
LG G +S V+ + +L VAIK + +E +E+ K F RE+ +S L H NIV ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 247 FCIDPEQG-LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAYL 303
+D E +L+ +Y+ G +L ++ S P SV + I + + +
Sbjct: 79 --VDEEDDCYYLVMEYIEGPTLSEYIE---------SHGPLSVDTAINFTNQILDGIKHA 127
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 345
H+ +VHRDIKP NIL+ S K K+ DFG+A S S+
Sbjct: 128 HD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 292
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 292
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 111
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVG 246
G VLG+G K + +K L + D+E+ + F +E+ + L HPN++ +G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 247 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
+ ++ L I +Y+ GG+L + +S PWS R A IA +AYLH+
Sbjct: 75 -VLYKDKRLNFITEYIKGGTLRGIIKSM------DSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++HRD+ N L+ K + DFGLA
Sbjct: 128 N---IIHRDLNSHNCLVRENKNVVVADFGLA 155
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L+++ H+H+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 292
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNI 241
+ K +G G V+K K R VA+KR LD ED+ RE+ + LHHPNI
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAESV 300
V L+ I E+ L L+++++ L++ L E K G++ + K+ L + V
Sbjct: 82 VSLID-VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQI-------KIYLYQLLRGV 132
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
A+ H + ++HRD+KP N+L++S KL DFGLA P
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 16/163 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNI 241
+ K +G G V+K K R VA+KR LD ED+ RE+ + LHHPNI
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAESV 300
V L+ I E+ L L+++++ L++ L E K G++ + + K+ L + V
Sbjct: 82 VSLID-VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-------QIKIYLYQLLRGV 132
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
A+ H + ++HRD+KP N+L++S KL DFGLA P
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLH 237
+ NF K +G G V+K + L VA+K RLD E + RE+ + L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVAL 294
HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 156
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L+HPNIV L+ I E L+L+++++S +K + +P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQ 114
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 115 LLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 159
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 71 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 121 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 65 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 115 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 293
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 158
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 71 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 121 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 183
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 27 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 137
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
VHRD+ N+L+S + K+ DFGL S+
Sbjct: 138 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 295
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 296 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 199 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 309
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
VHRD+ N+L+S + K+ DFGL
Sbjct: 310 ---FVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 12 QTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 122
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
VHRD+ N+L+S + K+ DFGL S+
Sbjct: 123 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 18 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 128
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
VHRD+ N+L+S + K+ DFGL
Sbjct: 129 ---FVHRDLAARNVLVSEDNVAKVSDFGL 154
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L+HPNIV L+ I E L+L+++++S ++ + G +P +
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFLS---MDLKDFMDASALTG---IPLPLIKSYLFQ 113
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 LLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 83 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 134
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 135 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 187
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
+HPNIV L+ I E L+L+++++S +K + +P + +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQL 113
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 LQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L+HPNIV L+ I E L+L+++++S ++ + G +P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLS---MDLKDFMDASALTG---IPLPLIKSYLFQ 114
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 115 LLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +++ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 119
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 172
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKVALGIA 297
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKPEDLYKDFLTLE 148
Query: 298 ESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR---YKVALGI 296
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKTPEDLYKDFLTL 147
Query: 297 AESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 173
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 63 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 114
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 115 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 167
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 170
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKDLYKDFLTLEHL 146
Query: 300 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y + G E R +HRD+ NILLS K + K+ DFGLA
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL 171
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 143
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 196
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 236
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST--LPWSVRYKVAL 294
+HPNIV L+ I E L+L++++V + KK + ++ +P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEHVD--------QDLKKFMDASALTGIPLPLIKSYLF 113
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
N+V L+G C P L +I ++ G+L +L K+ P + YK L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL-YKDFLTLEHL 152
Query: 300 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 197
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL 170
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 65 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 116
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 117 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 169
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL 170
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+ RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 240
NF K +G G V+K + L VA+ RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 297
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 170
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 171
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 70 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 121
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 122 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 174
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 175
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 143
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 196
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 173
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDSTR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 118 ANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G + + L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRTA-------TYITEL 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-KAFCRELMIASSLHHPNI 241
++ V+G GA + V + VAIKR++ E ++S +E+ S HHPNI
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 242 VPL-VGFCIDPEQGLFLIYKYVSGGS---LERHL---HEKKKGVRGNSTLPWSVRYKVAL 294
V F + E L+L+ K +SGGS + +H+ E K GV ST+ +R
Sbjct: 76 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE---- 129
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ E + YLH + +HRD+K NILL ++ DFG++ + +
Sbjct: 130 -VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLA 172
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVPLV 245
G +GRG VF G++ T VA+K + KA F +E I HPNIV L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG-IAESVAYLH 304
G C +Q ++++ + V GG L + +G R +R K L + ++ A +
Sbjct: 179 GVCTQ-KQPIYIVMELVQGGDFLTFL--RTEGAR--------LRVKTLLQMVGDAAAGME 227
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+C +HRD+ N L++ K + K+ DFG++
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 119
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ +FG + + LC T+
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 172
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVPLV 245
G +GRG VF G++ T VA+K + KA F +E I HPNIV L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG-IAESVAYLH 304
G C +Q ++++ + V GG L + +G R +R K L + ++ A +
Sbjct: 179 GVCTQ-KQPIYIVMELVQGGDFLTFL--RTEGAR--------LRVKTLLQMVGDAAAGME 227
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+C +HRD+ N L++ K + K+ DFG++
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPS 344
A +++Y H+ + V+HRDIKP N+LL S K+ DFG W+ APS
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG---WSCHAPS 161
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-KAFCRELMIASSLHHPNI 241
++ V+G GA + V + VAIKR++ E ++S +E+ S HHPNI
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 242 VPL-VGFCIDPEQGLFLIYKYVSGGS---LERHL---HEKKKGVRGNSTLPWSVRYKVAL 294
V F + E L+L+ K +SGGS + +H+ E K GV ST+ +R
Sbjct: 71 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE---- 124
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ E + YLH + +HRD+K NILL ++ DFG++ + +
Sbjct: 125 -VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLA 167
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F GR LG+G V+ + + +A+K L K E + RE+ I S L HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ L G+ D + ++LI +Y G++ R L + + + +A +
Sbjct: 73 NILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL 174
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
A +++Y H+ + V+HRDIKP N+LL S K+ +FG + + LC T+
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 173
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F GR LG+G V+ + + +A+K L K E + RE+ I S L HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ L G+ D + ++LI +Y G++ R L + + + +A +
Sbjct: 73 NILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC T+
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL 174
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 239
NF + +GRG S V++ L VA+K++ D +KA +E+ + L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
N++ I+ + L ++ + G L R + KK R +P +K + + +
Sbjct: 93 NVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKR---LIPERTVWKYFVQLCSA 148
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ ++H+ R V+HRDIKP+N+ +++ + KL D GL + S+
Sbjct: 149 LEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 236
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L G+ D + ++LI +Y G + + L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRTA-------TYITEL 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPS 344
A +++Y H+ + V+HRDIKP N+LL S K+ DFG W+ APS
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPS 165
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 73 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
E + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 125 EGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 166
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 86 MGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 137
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 187 GRVLGRGALSFVFK---GKVGLL-------RTSVAIKRLDKEDKESSKAFCRELMIASSL 236
G V+ L+FV + G+ GL+ + VAIK + +E S + F E + L
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 59
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HP +V L G C++ + + L+++++ G L +L ++G+ TL + L +
Sbjct: 60 SHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDV 112
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E +AYL E CV+HRD+ N L+ ++ K+ DFG+
Sbjct: 113 CEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 17 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 74 MGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 125
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 126 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 156
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 23/161 (14%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKESSKAFCRELMIASSLHHPNIVPL 244
++G G V++ + VA+K D++ ++ + +E + + L HPNI+ L
Sbjct: 14 IIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
G C+ E L L+ ++ GG L R L K+ +P + A+ IA + YLH
Sbjct: 72 RGVCLK-EPNLCLVMEFARGGPLNRVLSGKR--------IPPDILVNWAVQIARGMNYLH 122
Query: 305 NGTERCVVHRDIKPSNILLSSK--------KIPKLCDFGLA 337
+ ++HRD+K SNIL+ K KI K+ DFGLA
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRL--DKEDKESSKAFCRELMIASSLHHPNIVPLVG 246
++G G+ V K + VAIK+ +DK K RE+ + L H N+V L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 247 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
C ++ +L++++V L+ L G L + V K I + + H+
Sbjct: 92 VC-KKKKRWYLVFEFVDHTILD-DLELFPNG------LDYQVVQKYLFQIINGIGFCHSH 143
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
++HRDIKP NIL+S + KLCDFG A +AP
Sbjct: 144 N---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 86 MGYSTAPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 137
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 77 NPHVCRLLGICLT--STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
K +VLG G V KG + ++ V IK + DK ++S +A ++ SL
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H +IV L+G C P L L+ +Y+ GSL H+ + + + L W V+ IA
Sbjct: 74 HAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IA 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + YL E +VHR++ N+LL S ++ DFG+A
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKR-LDKEDKESSKAFC-RELMIASSLHHPNIVPLVGF 247
+G G+ VFK + VAIK+ L+ ED K RE+ + L HPN+V L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE- 69
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
++ L L+++Y L HE + RG +P + + ++V + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL----HELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHN 122
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+HRD+KP NIL++ + KLCDFG A + PS
Sbjct: 123 ---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
K +VLG G V KG + ++ V IK + DK ++S +A ++ SL
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H +IV L+G C P L L+ +Y+ GSL H+ + + + L W V+ IA
Sbjct: 92 HAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IA 143
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + YL E +VHR++ N+LL S ++ DFG+A
Sbjct: 144 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VAIK +DK + S + RE+ I L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 298
IV L I+ E+ L+LI +Y SGG + +L H + K S I
Sbjct: 76 IVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---------IVS 125
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 77 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VAIK +DK + S + RE+ I L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 298
IV L I+ E+ L+LI +Y SGG + +L H + K S I
Sbjct: 73 IVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---------IVS 122
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
+G G V G L + VAIK + KE S F E + L HP +V L G C+
Sbjct: 35 IGSGQFGLVHLG-YWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 93 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 142
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
CV+HRD+ N L+ ++ K+ DFG+ +
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 173
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 80 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 132 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 101 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 152
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 153 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 79 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA++ +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA++ +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 122
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 123 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 13 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 71 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 120
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
CV+HRD+ N L+ ++ K+ DFG+
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 82 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 134 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 68 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----------QI 115
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL + K+ DFG +
Sbjct: 116 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 86 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 137
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 138 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 18 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 76 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 125
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
CV+HRD+ N L+ ++ K+ DFG+
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 78 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 70 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 122 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA--FCRELMIASSLH-HPNIVPLVG 246
LG+GA V+K VA+K++ + S+ A RE+MI + L H NIV L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 247 FC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
D ++ ++L++ Y +E LH +R N P +Y V + + + YLH+
Sbjct: 77 VLRADNDRDVYLVFDY-----METDLH---AVIRANILEPVHKQY-VVYQLIKVIKYLHS 127
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
G ++HRD+KPSNILL+++ K+ DFGL+
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 240
N+ + +G+G + V + L VA+K +DK + S + RE+ I L+HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 76 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QI 123
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V Y H ++ +VHRD+K N+LL K+ DFG +
Sbjct: 124 VSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 188 RVLGRGALSFVFKGK-VGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH-HPNIVPLV 245
RVL G +FV++ + VG R A+KRL ++E ++A +E+ L HPNIV
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGR-EYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 246 GFCI---------DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
FC D Q FL+ + G L L KK RG L K+
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRG--PLSCDTVLKIFYQT 145
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+V ++H + ++HRD+K N+LLS++ KLCDFG AT S
Sbjct: 146 CRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVP 243
RV+G+G V+ G+ R AIK L + + + +AF RE ++ L+HPN++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L+G + PE ++ Y+ G L + + ++ N T+ + + L +A + YL
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR----NPTVKDLISF--GLQVARGMEYL 140
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E+ VHRD+ N +L K+ DFGLA
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F GR LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 76 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 124
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSV 345
LH ER V+HRDIKP N+L+ K K+ DFG W+ APS+
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSL 168
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F GR LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 75 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 123
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSV 345
LH ER V+HRDIKP N+L+ K K+ DFG W+ APS+
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSL 167
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 363 I 363
I
Sbjct: 193 I 193
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 81 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 131
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 363 I 363
I
Sbjct: 192 I 192
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPLVGFC 248
LG G + V+KGK L VA+K + E +E + RE+ + L H NIV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI- 68
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
I E+ L L+++Y+ L+++L + GN +V+ + +AY H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDC-----GNIINMHNVKL-FLFQLLRGLAYCHR--- 118
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ V+HRD+KP N+L++ + KL DFGLA S P+
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 93 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 143
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 363 I 363
I
Sbjct: 204 I 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 27/171 (15%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+F + ++G G VFK K + + IKR+ K +++ RE+ + L H NIV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV 67
Query: 243 PL----VGFCIDPEQG-----------LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 287
GF DPE LF+ ++ G+LE+ + EK++G + + L
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALE 126
Query: 288 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++ G V Y+H+ + +++RD+KPSNI L K K+ DFGL T
Sbjct: 127 LFEQITKG----VDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 363 IE 364
I+
Sbjct: 196 IK 197
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 27/188 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDK--ESSKAFCRELMIASSLHHPNIVPLVGF 247
+G G+ V+KGK VA+K L D E +AF E+ + H NI+ +G+
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+ L ++ ++ G SL +HLH ++ + + +A A+ + YLH
Sbjct: 101 MT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI------DIARQTAQGMDYLH--- 149
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLAT----WTSAP-------SVPFLCKTVKGTF 356
+ ++HRD+K +NI L K+ DFGLAT W+ + SV ++ V
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 357 GQNPFCIE 364
NPF +
Sbjct: 210 DNNPFSFQ 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 I 363
I
Sbjct: 191 I 191
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 363 I 363
I
Sbjct: 193 I 193
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 363 I 363
I
Sbjct: 193 I 193
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 363 IE 364
I+
Sbjct: 196 IK 197
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 I 363
I
Sbjct: 191 I 191
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 363 I 363
I
Sbjct: 196 I 196
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 IE 364
I+
Sbjct: 191 IK 192
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 84 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 134
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 363 IE 364
I+
Sbjct: 195 IK 196
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 I 363
I
Sbjct: 191 I 191
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 16 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + L+ +++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 74 E-QAPICLVTEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 123
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
CV+HRD+ N L+ ++ K+ DFG+
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 I 363
I
Sbjct: 191 I 191
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 135
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 363 I 363
I
Sbjct: 196 I 196
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 363 IE 364
I+
Sbjct: 191 IK 192
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 15 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 72 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 123
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 124 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 154
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 75 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 126
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 75 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 126
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 245
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
D +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EILEDS-SSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMH- 138
Query: 306 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLAT 338
+ +VHRD+KP NILL SK+ K+ DFGL+T
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 33 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 90 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 141
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 142 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 98 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 149
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFC 248
LGRGA S V++ K + A+K L K DK+ + E+ + L HPNI+ L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNIIKLKEIF 117
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
P + + L+ + V+GG L + EK G +V+ I E+VAYLH E
Sbjct: 118 ETPTE-ISLVLELVTGGELFDRIVEK--GYYSERDAADAVK-----QILEAVAYLH---E 166
Query: 309 RCVVHRDIKPSNILLSS--KKIP-KLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEE 365
+VHRD+KP N+L ++ P K+ DFGL+ L KTV GT G +C E
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGTPG---YCAPE 220
Query: 366 WQR 368
R
Sbjct: 221 ILR 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 98 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 149
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 40 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 97 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 148
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 149 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 179
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTAPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ ++HRD+K +NI L K+ DFGLAT
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 80 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 132 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 173
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 83 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCR---ELMIASSLHHP 239
+F G +LG+G+ + V++ + VAIK +DK+ + R E+ I L HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
+I+ L + D ++L+ + G + R+L + K N + + I
Sbjct: 72 SILELYNYFEDSNY-VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ------IITG 124
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ YLH+ ++HRD+ SN+LL+ K+ DFGLAT P
Sbjct: 125 MLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 244
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 245 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 142
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSA 342
H +VHRD+KP N+LL SK ++ DFGL+T A
Sbjct: 143 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAI L + +++K E + +S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 110 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 161
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 162 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL +
Sbjct: 78 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---K 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 363 I 363
I
Sbjct: 189 I 189
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 170
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 171 VKIGDFGLT 179
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 183
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 184 VKIGDFGLT 192
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 78 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 182 HNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSKA-FCRELMIASS 235
+N R +G GA VF+ + GLL T VA+K L +E +A F RE + +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLH-----------------EKKKGV 278
+PNIV L+G C + + L+++Y++ G L L +
Sbjct: 107 FDNPNIVKLLGVCAV-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 279 RGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
G L + + +A +A +AYL +ER VHRD+ N L+ + K+ DFGL+
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 155
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 156 VKIGDFGLT 164
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 157
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 158 VKIGDFGLT 166
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFGLA A
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+P++ L+G C+ + LI + + G L ++ E K + L W V+ IA
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA 342
+ + YL + R +VHRD+ N+L+ + + K+ DFG A A
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 176
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 170
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 171 VKIGDFGLT 179
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 150
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 151 VKIGDFGLT 159
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 152
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 153 VKIGDFGLT 161
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 152
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 153 VKIGDFGLT 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 159
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 160 VKIGDFGLT 168
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 151
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 152 VKIGDFGLT 160
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NI++S+ K+ DFG+A
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 152
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 153 VKIGDFGLT 161
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NI++S+ K+ DFG+A
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 158
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 159 VKIGDFGLT 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 156
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 157 VKIGDFGLT 165
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
R LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 244 LVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G C + L LI +++ GSL +L + K+ + L ++ + I + + Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEY 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
L GT+R +HRD+ NIL+ ++ K+ DFGL
Sbjct: 133 L--GTKR-YIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL +
Sbjct: 78 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---K 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD+ N L+ + K+ DFGL+
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 182 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 237
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 163
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH ER +++RD+K N+LL S+ KL D+G+
Sbjct: 164 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 244
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 245 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 115 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 165
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSA 342
H +VHRD+KP N+LL SK ++ DFGL+T A
Sbjct: 166 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 140
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NI++S+ K+ DFG+A
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 187 GRVLGRGALSFVFK---GKVGLL-------RTSVAIKRLDKEDKESSKAFCRELMIASSL 236
G V+ L+FV + G+ GL+ + VAIK + +E S + F E + L
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 59
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HP +V L G C++ + + L+++++ G L +L ++G+ TL + L +
Sbjct: 60 SHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDV 112
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
E +AYL E V+HRD+ N L+ ++ K+ DFG+
Sbjct: 113 CEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGM 149
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 284 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 334
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HR++ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 363 IE 364
I+
Sbjct: 395 IK 396
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F GR LG+G V+ + VA+K L K E RE+ I + LHHP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ L + D + ++LI +Y G L + L + + T + +A++
Sbjct: 84 NILRLYNYFYD-RRRIYLILEYAPRGELYKELQK-------SCTFDEQRTATIMEELADA 135
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSVPFLCKTVKGTFGQ 358
+ Y H + V+HRDIKP N+LL K K+ DFG W+ APS+ KT+ GT
Sbjct: 136 LMYCHG---KKVIHRDIKPENLLLGLKGELKIADFG---WSVHAPSL--RRKTMCGTLDY 187
Query: 359 NP 360
P
Sbjct: 188 LP 189
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L FC ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 149
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 150 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 182 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 237
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 80 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 131
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH ER +++RD+K N+LL S+ KL D+G+
Sbjct: 132 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 244
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 245 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 116 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 166
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSA 342
H +VHRD+KP N+LL SK ++ DFGL+T A
Sbjct: 167 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 81 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 131
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD+ N L+ + K+ DFGL+
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD+ N L+ + K+ DFGL+
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 287 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 337
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HR++ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 363 IE 364
I+
Sbjct: 398 IK 399
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 244
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 245 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 98 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 148
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSA 342
H +VHRD+KP N+LL SK ++ DFGL+T A
Sbjct: 149 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K S +AF E + +L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VV 77
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E+ +++I +Y++ GSL L K G LP + + IAE +AY+ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQ--IAEGMAYIER---K 129
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------------------TWTSAPSVPFLCKT 351
+HRD++ +N+L+S + K+ DFGLA WT+ ++ F C T
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 352 VK 353
+K
Sbjct: 190 IK 191
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 78 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD+ N L+ + K+ DFGL+
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 245
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
++ +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHK 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLAT 338
+VHRD+KP NILL SK+ K+ DFGL+T
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 182 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 237
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 116
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH ER +++RD+K N+LL S+ KL D+G+
Sbjct: 117 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 27/179 (15%)
Query: 182 HNFSKGRVLGRGALSFVFKGKV-GLLRTSVAIK---RLDKEDKESSK--AFCRELMIASS 235
N G+VLG GA V G+ +T V+I+ ++ KE +SS+ A EL + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 236 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN------------- 281
L H NIV L+G C ++LI++Y G L +L K++ +
Sbjct: 105 LGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 282 ---STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ L + A +A+ + +L + VHRD+ N+L++ K+ K+CDFGLA
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 245
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
++ +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHK 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLAT 338
+VHRD+KP NILL SK+ K+ DFGL+T
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 326 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 376
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HR++ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 363 IE 364
I+
Sbjct: 437 IK 438
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 178 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 235
++++ F + LG G + V+KG VA+K +LD E+ S A RE+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKE 59
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L H NIV L I E L L+++++ L++++ + G V+Y
Sbjct: 60 LKHENIVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKY-FQWQ 116
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
+ + +A+ H E ++HRD+KP N+L++ + KL DFGLA P F + V
Sbjct: 117 LLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 250 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH+ ++HRD+K NIL + KL DFG++
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 250 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH+ ++HRD+K NIL + KL DFG++
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 250 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH+ ++HRD+K NIL + KL DFG++
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 182 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 237
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 120
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH ER +++RD+K N+LL S+ KL D+G+
Sbjct: 121 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E +++ +Y+ G+L +L E + + V +A I+ ++ YL ++
Sbjct: 99 -LEPPFYIVTEYMPYGNLLDYLRECNR-----EEVTAVVLLYMATQISSAMEYLE---KK 149
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK-TVKGTFGQNPFC 362
+HRD+ N L+ + K+ DFGL+ T+T+ F K T + N F
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 363 IE 364
I+
Sbjct: 210 IK 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 226 FCRELMIASSLHHPNIVPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL 284
REL + + P IV G F D E + + +++ GGSL++ L E K+ +
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKEAKR-------I 111
Query: 285 PWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
P + KV++ + +AYL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 112 PEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 40/184 (21%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+F + ++G G VFK K + + I+R+ K +++ RE+ + L H NIV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIV 68
Query: 243 PL----VGFCIDPEQG------------------------LFLIYKYVSGGSLERHLHEK 274
GF DPE LF+ ++ G+LE+ + EK
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EK 127
Query: 275 KKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDF 334
++G + + L + ++ G V Y+H+ + ++HRD+KPSNI L K K+ DF
Sbjct: 128 RRGEKLDKVLALELFEQITKG----VDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 335 GLAT 338
GL T
Sbjct: 181 GLVT 184
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 189 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 244
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 245 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 295
+G C + L+L +Y G+L R L NST L A
Sbjct: 82 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+A + YL +++ +HRD+ NIL+ + K+ DFGL+
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 241
+F + LGRG VF+ K + + AIKR+ ++E + + RE+ + L HP I
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 242 VPLVGFCIDPEQGLFL------IYKYVSGGSLERHLHEKKKGVRGNSTLP---WSVRYKV 292
V ++ L +Y Y+ + K + G T+ SV +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKE--NLKDWMNGRCTIEERERSVCLHI 123
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
L IAE+V +LH+ + ++HRD+KPSNI + + K+ DFGL T
Sbjct: 124 FLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K S +AF E + +L H +V L +
Sbjct: 20 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VV 76
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E+ +++I ++++ GSL L K G LP + + IAE +AY+ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQ--IAEGMAYIER---K 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA------------------TWTSAPSVPFLCKT 351
+HRD++ +N+L+S + K+ DFGLA WT+ ++ F C T
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 352 VK 353
+K
Sbjct: 189 IK 190
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 189 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 244
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 245 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 295
+G C + L+L +Y G+L R L NST L A
Sbjct: 92 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+A + YL +++ +HRD+ NIL+ + K+ DFGL+ VK T
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVKKT 199
Query: 356 FGQNPFCIEEWQRLKS 371
G+ P W ++S
Sbjct: 200 MGRLPV---RWMAIES 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 239
+F R LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 75 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 123
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSV 345
LH ER V+HRDIKP N+L+ K K+ DFG W+ APS+
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSL 167
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSL 236
HN R LG GA VF + L + VA+K L + K F RE + ++L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKG----VRGN--STLPWSVRY 290
H +IV G C++ + L ++++Y+ G L + L GN + L S
Sbjct: 73 QHEHIVKFYGVCVEGDP-LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+A IA + YL + VHRD+ N L+ + K+ DFG++
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKAFCR---ELMIA 233
+F R LG G+ G+V L+R+ A+K L KE K E ++
Sbjct: 6 QDFQILRTLGTGSF-----GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 234 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 293
S + HP I+ + G D +Q +F+I Y+ GG L L R + P V A
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQ-IFMIMDYIEGGELFSLL-------RKSQRFPNPVAKFYA 112
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPF-LCKT 351
+ ++ YLH+ + +++RD+KP NILL K+ DFG A + P V + LC T
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTYXLCGT 166
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + K+ + L ++ + I + + YL GT+R +HR++ NIL+ ++
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRNLATRNILVENENR 153
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 154 VKIGDFGLT 162
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 115 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 165
Query: 329 PKLCDFGLA 337
K+ DFGLA
Sbjct: 166 VKIADFGLA 174
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA---FCRELMIASSLHHPNIVP 243
G LG G V GK L VA+K L+++ S RE+ HP+I+
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L P +F++ +YVSGG L ++ + N L ++ I V Y
Sbjct: 81 LYQVISTPSD-IFMVMEYVSGGELFDYICK-------NGRLDEKESRRLFQQILSGVDYC 132
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
H VVHRD+KP N+LL + K+ DFGL+ S
Sbjct: 133 HR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 25/163 (15%)
Query: 185 SKGRVLGRGALSFVFKGKVGLLRTS-------VAIKRLDKEDKESSKA-FCRELMIASSL 236
++ +V+G G V+KG +L+TS VAIK L E + F E I
Sbjct: 47 TRQKVIGAGEFGEVYKG---MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-- 294
H NI+ L G I + + +I +Y+ G+L++ L EK +SV V +
Sbjct: 104 SHHNIIRLEG-VISKYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVGMLR 154
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
GIA + YL N VHRD+ NIL++S + K+ DFGL+
Sbjct: 155 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLS 194
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 244
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 245 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F D +G F L+ + +GG L + +K+ ++ ++ + + Y
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYX 142
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSA 342
H +VHRD+KP N+LL SK ++ DFGL+T A
Sbjct: 143 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 102 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 152
Query: 329 PKLCDFGLA 337
K+ DFGLA
Sbjct: 153 VKIADFGLA 161
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 181 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 116
Query: 299 SVAYLH-NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
S+AY H NG +VHR++KP N+LL+SK KL DFGLA
Sbjct: 117 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NIL+S+ K+ DFG+A
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIA 163
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 103 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 153
Query: 329 PKLCDFGLA 337
K+ DFGLA
Sbjct: 154 VKIADFGLA 162
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 181 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 88 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 139
Query: 299 SVAYLH-NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
S+AY H NG +VHR++KP N+LL+SK KL DFGLA
Sbjct: 140 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 181 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 64 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 115
Query: 299 SVAYLH-NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
S+AY H NG +VHR++KP N+LL+SK KL DFGLA
Sbjct: 116 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
VLG+G V+ G+ + +AIK + + D S+ E+ + L H NIV +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 249 IDPEQGLFLIY-KYVSGGSLERHLHEKKKGVRGN-STLPWSVRYKVALGIAESVAYLHNG 306
E G I+ + V GGSL L K ++ N T+ + + I E + YLH+
Sbjct: 89 --SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN 141
Query: 307 TERCVVHRDIKPSNILLSS-KKIPKLCDFG 335
+VHRDIK N+L+++ + K+ DFG
Sbjct: 142 Q---IVHRDIKGDNVLINTYSGVLKISDFG 168
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 181 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 116
Query: 299 SVAYLH-NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
S+AY H NG +VHR++KP N+LL+SK KL DFGLA
Sbjct: 117 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKE-DKESSKAFCRELMIASS 235
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 66 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 117
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
I +++AYL + VHRDI NIL++S + KL DFGL+ +
Sbjct: 118 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 158
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 250 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVG---LLRTSVAIKRLDKE-DKESSKAFCRELMIASS 235
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 70 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 121
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
I +++AYL + VHRDI NIL++S + KL DFGL+ +
Sbjct: 122 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 250 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 268
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+L + + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 155
Query: 329 PKLCDFGLA 337
K+ DFGL
Sbjct: 156 VKIGDFGLT 164
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
VLG+G V+ G+ + +AIK + + D S+ E+ + L H NIV +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 249 IDPEQGLFLIY-KYVSGGSLERHLHEKKKGVRGN-STLPWSVRYKVALGIAESVAYLHNG 306
E G I+ + V GGSL L K ++ N T+ + + I E + YLH+
Sbjct: 75 --SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN 127
Query: 307 TERCVVHRDIKPSNILLSS-KKIPKLCDFG 335
+VHRDIK N+L+++ + K+ DFG
Sbjct: 128 Q---IVHRDIKGDNVLINTYSGVLKISDFG 154
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S L
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVG---LLRTSVAIKRLDKE-DKESSKAFCRELMIASS 235
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 82 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 133
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
I +++AYL + VHRDI NIL++S + KL DFGL+ +
Sbjct: 134 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 174
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NI++S+ K+ DFG+A
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 241 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ L+ + ++HRD+KP+NI++S+ K+ DFG+A
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 86 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 136
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S L
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 275 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 250 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+ E
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYV----E 380
Query: 309 RC-VVHRDIKPSNILLSSKKIPKLCDFGLA 337
R VHRD++ +NIL+ + K+ DFGLA
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLA 410
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 141
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 142 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+F + VLG+GA V K + L AIK++ + +E E+M+ +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 243 --------------PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
P+ + + LF+ +Y G+L +H + + +
Sbjct: 66 RYYAAWLERRNFVKPMT--AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY----- 118
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+++ I E+++Y+H+ + ++HRD+KP NI + + K+ DFGLA
Sbjct: 119 -WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 141
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 142 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 250 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 129 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 179
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 180 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 70 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 120
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 189 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 244
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 245 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 295
+G C + L+L +Y G+L R L NST L A
Sbjct: 89 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+A + YL +++ +HR++ NIL+ + K+ DFGL+ VK T
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV--------YVKKT 196
Query: 356 FGQNPFCIEEWQRLKS 371
G+ P W ++S
Sbjct: 197 MGRLPV---RWMAIES 209
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 244
G ++G+G V+ G+ VAI+ +D +++++ KAF RE+M H N+V
Sbjct: 38 GELIGKGRFGQVYHGR---WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+G C+ P L +I G +L + + K + N T ++A I + + YLH
Sbjct: 95 MGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKT------RQIAQEIVKGMGYLH 147
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ ++H+D+K N+ + K+ + DFGL
Sbjct: 148 ---AKGILHKDLKSKNVFYDNGKV-VITDFGL 175
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 94 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 75 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 126
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 127 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 187 GRVLGRGALSFVFKGKVGL-----LRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNI 241
G++LG G V +G + L+ +V +LD + + F E HPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 242 VPLVGFCID-PEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+ L+G CI+ QG+ +I ++ G L +L + G +P K + IA
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET-GPKHIPLQTLLKFMVDIA 157
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ YL N R +HRD+ N +L + DFGL+
Sbjct: 158 LGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPLVGF 247
VLG GA S V + + VAIK + KE E + + E+ + + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 248 CIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
E G L+LI + VSGG L + EK +++ ++ + ++V YLH+
Sbjct: 85 Y---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD 134
Query: 306 GTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPSV 345
+VHRD+KP N+L L + DFGL+ SV
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 161 SISPV--ANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE 218
S+ PV N + + EIL R +G+G+ V + + A+K ++K+
Sbjct: 1 SMPPVFDENEDVNFDHFEIL---------RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ 51
Query: 219 ---DKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK 275
++ + +EL I L HP +V L + E+ +F++ + GG L HL +
Sbjct: 52 KCVERNEVRNVFKELQIMQGLEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQ-- 108
Query: 276 KGVRGNSTLPWSVRYK---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+V +K V L I E V L + ++HRD+KP NILL +
Sbjct: 109 -----------NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT 157
Query: 333 DFGLA 337
DF +A
Sbjct: 158 DFNIA 162
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSL 236
++ G LG G + V K + A K + K SS+ RE+ I +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L + + + LI + VSGG L L EK+ +T + I
Sbjct: 73 RHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQI 124
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTV 352
+ V YLH+ + + H D+KP NI+L K +P KL DFG+A A
Sbjct: 125 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA------GNEF 175
Query: 353 KGTFGQNPFCIEE 365
K FG F E
Sbjct: 176 KNIFGTPEFVAPE 188
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 15 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 123
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLA 150
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 19 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFL----KGETGKYLRLPQLV--DMAAQIASGMAYVERMN- 127
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 128 --YVHRDLRAANILVGENLVCKVADFGLA 154
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 241
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 242 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + ++HRD+KPSNIL++S+ KLCDFG++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPLVGF 247
VLG GA S V + + VAIK + KE E + + E+ + + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 248 CIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
E G L+LI + VSGG L + EK +++ ++ + ++V YLH+
Sbjct: 85 Y---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD 134
Query: 306 GTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPSV 345
+VHRD+KP N+L L + DFGL+ SV
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 69 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 120
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 121 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSL 236
++ G LG G + V K + A K + K SS+ RE+ I +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L + + + LI + VSGG L L EK+ +T + I
Sbjct: 66 RHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQI 117
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTV 352
+ V YLH+ + + H D+KP NI+L K +P KL DFG+A A +
Sbjct: 118 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------EF 168
Query: 353 KGTFGQNPFCIEE 365
K FG F E
Sbjct: 169 KNIFGTPEFVAPE 181
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSL 236
++ G LG G + V K + A K + K SS+ RE+ I +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
HPNI+ L + + + LI + VSGG L L EK+ +T + I
Sbjct: 87 RHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQI 138
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTV 352
+ V YLH+ + + H D+KP NI+L K +P KL DFG+A A +
Sbjct: 139 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------EF 189
Query: 353 KGTFGQNPFCIEE 365
K FG F E
Sbjct: 190 KNIFGTPEFVAPE 202
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 145
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 146 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 68 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 119
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 120 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 17 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 125
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLA 152
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPLVGF 247
VLG GA S V + + VAIK + KE E + + E+ + + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 248 CIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
E G L+LI + VSGG L + EK +++ ++ + ++V YLH+
Sbjct: 85 Y---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD 134
Query: 306 GTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPSV 345
+VHRD+KP N+L L + DFGL+ SV
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 70 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 121
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 122 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 149 ELKWRKIQSLERSISPVANSLIRLSYGEILAATHN-FSKGRVLGRGALSFVFKGKV-GLL 206
E++W+ ++ + + + V +L Y N S G+ LG GA V + GL+
Sbjct: 6 EVQWKVVEEINGN-NXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 64
Query: 207 RTSVAIKRLDKEDKESS-----KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 260
++ A+ K K S+ +A EL + S L +H NIV L+G C L +I +
Sbjct: 65 KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-VITE 123
Query: 261 YVSGGSLERHLHEKKKGVRGNSTLP---------------WSVRYKVALGIAESVAYLHN 305
Y G L L K+ + T P S Y+VA G+A +L
Sbjct: 124 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL-- 177
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 178 ASKNCI-HRDLAARNILLTHGRITKICDFGLA 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 145
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 146 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 147
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 148 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 71 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 122
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 123 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 132 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGLA
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 108 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 165 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 58 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 117
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 118 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 175 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 109 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 166 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 98 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 155 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 193 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 301
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGL
Sbjct: 302 --YVHRDLRAANILVGENLVCKVADFGLG 328
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 91 NHQNIVRCIGVSL---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 149 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 203
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 204 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 256
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 126
Query: 257 LIYKYVSGGSLERHLHEKKKGVR-------GNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+I +Y G L L K + + NSTL + +A+ +A+L ++
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKN 184
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
C+ HRD+ N+LL++ + K+ DFGLA
Sbjct: 185 CI-HRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 91 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + + H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMIAS 234
A +F +V+G+G+ V + A+K L K+ KE ++
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 235 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
++ HP +V L F L+ + Y++GG L HL R L R+ A
Sbjct: 95 NVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQ------RERCFLEPRARFYAA- 146
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
IA ++ YLH+ +V+RD+KP NILL S+ L DFGL
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSL---HHPN 240
F R+ G+G V GK SVAIK++ ++ + + REL I L HHPN
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN----RELQIMQDLAVLHHPN 80
Query: 241 IVPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAE 298
IV L F E+ IY V + LH + P + KV L +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLS-SKKIPKLCDFGLATWTSA--PSVPFLC 349
S+ LH + V HRDIKP N+L++ + KLCDFG A S P+V ++C
Sbjct: 141 SIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 184 FSKGRVLGRGALSFVFKGKV-GLLRTSVAIKRLDKEDKESS-----KAFCRELMIASSL- 236
S G+ LG GA V + GL+++ A+ K K S+ +A EL + S L
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP----------- 285
+H NIV L+G C L +I +Y G L L K+ + T P
Sbjct: 85 NHMNIVNLLGACTIGGPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 286 ----WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+A +L ++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 144 LEDLLSFSYQVAKGMA----FL--ASKNCI-HRDLAARNILLTHGRITKICDFGLA 192
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 184 FSKGRVLGRGALSFVFKGK---VGLLRTSVAIKRLDKEDKESSKAFCRE-----LMIASS 235
+ G LG G + V K + GL + IK+ ++ + S + CRE + I
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK--RQSRASRRGVCREEIEREVSILRQ 71
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
+ HPNI+ L + + LI + VSGG L L +K+ +T
Sbjct: 72 VLHPNIITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQ 123
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
I + V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 124 ILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA-FCRELMIASSL 236
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 237 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 83 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 140 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 182 HNFSKGRVLGRGALSFVFKGKV-GLLRTSVAIKRLDKEDKESS-----KAFCRELMIASS 235
+ S G+ LG GA V + GL+++ A+ K K S+ +A EL + S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 236 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--------- 285
L +H NIV L+G C L +I +Y G L L K+ + T P
Sbjct: 101 LGNHMNIVNLLGACTIGGPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 286 ------WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+A +L ++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 160 LDLEDLLSFSYQVAKGMA----FL--ASKNCI-HRDLAARNILLTHGRITKICDFGLA 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 166 ANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA 225
A S L YG + + + LG G V GK + VAIK + KE S
Sbjct: 8 APSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDE 65
Query: 226 FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
F E + +L H +V L G C ++ +F+I +Y++ G L +L E + + L
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL- 123
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
++ + E++ YL + + +HRD+ N L++ + + K+ DFGL+ +
Sbjct: 124 -----EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 166 ANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA 225
A S L YG + + + LG G V GK + VAIK + KE S
Sbjct: 8 APSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDE 65
Query: 226 FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
F E + +L H +V L G C ++ +F+I +Y++ G L +L E + + L
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL- 123
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
++ + E++ YL + + +HRD+ N L++ + + K+ DFGL+ +
Sbjct: 124 -----EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 182 HNFSKGRVLGRGALSFVFKGKV-GLLRTSVAIKRLDKEDKESS-----KAFCRELMIASS 235
+ S G+ LG GA V + GL+++ A+ K K S+ +A EL + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 236 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--------- 285
L +H NIV L+G C L +I +Y G L L K+ + T P
Sbjct: 106 LGNHMNIVNLLGACTIGGPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 286 ------WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+A +L ++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 165 LDLEDLLSFSYQVAKGMA----FL--ASKNCI-HRDLAARNILLTHGRITKICDFGLA 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNG-TTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD+ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLA 161
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 184 FSKGRVLGRGALSFVFKGKV-GLLRTSVAIKRLDKEDKESS-----KAFCRELMIASSL- 236
S G+ LG GA V + GL+++ A+ K K S+ +A EL + S L
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 237 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP----------- 285
+H NIV L+G C L +I +Y G L L K+ + T P
Sbjct: 108 NHMNIVNLLGACTIGGPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 286 ----WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+A +L ++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 167 LEDLLSFSYQVAKGMA----FL--ASKNCI-HRDLAARNILLTHGRITKICDFGLA 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 209 SVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVG-FCIDPEQGLFLIYKYVSGGSL 267
VA+K++D ++ + E++I HH N+V + + + E L+++ +++ GG+L
Sbjct: 72 QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDE--LWVVMEFLEGGAL 129
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ + +T V L + +++YLHN + V+HRDIK +ILL+S
Sbjct: 130 TDIVTHTRMNEEQIAT--------VCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDG 178
Query: 328 IPKLCDFGLATWTS 341
KL DFG S
Sbjct: 179 RIKLSDFGFCAQVS 192
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASSLHHPN 240
FS R +G G+ V+ + VAIK++ K+S++ + +E+ L HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS---LERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+ G C E +L+ +Y G + LE H KK ++ V G
Sbjct: 77 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIA------AVTHGAL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 348
+ +AYLH+ ++HRD+K NILLS + KL DFG A+ AP+ F+
Sbjct: 126 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS-IMAPANXFV 172
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLXGIK----HLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 134
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 188 RVLGRGALSFVFKGKVGLLR---------TSVAIKRLDKEDKESSKA-FCRELMIASSLH 237
R LG G GKV L R VA+K L E + A +E+ I +L+
Sbjct: 15 RDLGEGHF-----GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 238 HPNIVPLVGFCI-DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
H NIV G C D G+ LI +++ GSL+ +L + K + L ++V+ I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ------I 123
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + YL + R VHRD+ N+L+ S+ K+ DFGL
Sbjct: 124 CKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 16 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 72 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 123
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA 151
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 26 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 82 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 133
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 188 RVLGRGALSFVFKGKVGLLR---------TSVAIKRLDKEDKESSKA-FCRELMIASSLH 237
R LG G GKV L R VA+K L E + A +E+ I +L+
Sbjct: 27 RDLGEGHF-----GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 238 HPNIVPLVGFCI-DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
H NIV G C D G+ LI +++ GSL+ +L + K + L ++V+ I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ------I 135
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + YL + R VHRD+ N+L+ S+ K+ DFGL
Sbjct: 136 CKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 22 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 78 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 129
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 134
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 89
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 145
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 31 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 87 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 138
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 29 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 85 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 136
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 183 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 233
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 234 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 280
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 281 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 337 A 337
+
Sbjct: 197 S 197
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLXGIK----HLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 118
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 307
I ++ L L+++++ L++ L + G+ SV K L + +AY H+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCHD-- 118
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
R V+HRD+KP N+L++ + K+ DFGLA P
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 307
I ++ L L+++++ L++ L + G+ SV K L + +AY H+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCHD-- 118
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
R V+HRD+KP N+L++ + K+ DFGLA P
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 81
Query: 243 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV E + R TLP +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 249 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 307
I ++ L L+++++ L++ L + G+ SV K L + +AY H+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCHD-- 118
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
R V+HRD+KP N+L++ + K+ DFGLA P
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
+ I R+ +++E S+ RE+ + +++ HPNIV + L+++ Y GG L +
Sbjct: 57 INISRMSSKEREESR---REVAVLANMKHPNIVQYRE-SFEENGSLYIVMDYCEGGDLFK 112
Query: 270 HLHEKKKGV--RGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
++ +K GV + + L W V+ +AL ++H+ R ++HRDIK NI L+
Sbjct: 113 RINAQK-GVLFQEDQILDWFVQICLAL------KHVHD---RKILHRDIKSQNIFLTKDG 162
Query: 328 IPKLCDFGLA 337
+L DFG+A
Sbjct: 163 TVQLGDFGIA 172
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S G L L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 104
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 160
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 239
+F G++LG G+ S + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
+ YLH + ++HRD+KP NILL+ ++ DFG A S S
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 30 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 86 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 137
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 23 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 79 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 130
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+S K+ DFGLA
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 172 LSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM 231
L YG + + + LG G V GK + VAIK + KE S F E
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAK 62
Query: 232 IASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
+ +L H +V L G C ++ +F+I +Y++ G L +L E + + L +
Sbjct: 63 VMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------E 115
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+ + E++ YL + + +HRD+ N L++ + + K+ DFGL+ +
Sbjct: 116 MCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 161
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQG-LFLIYKYVSGGSLE 268
VA+K+L + + F RE+ I +LH IV G P + L L+ +Y+ G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 99 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 149
Query: 329 PKLCDFGLA 337
K+ DFGLA
Sbjct: 150 VKIADFGLA 158
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 85 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 135
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 136 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 110
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 166
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
++ +V+G G+ VF+ K+ + VAIK++ ++ + + REL I + HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKL-VESDEVAIKKVLQDKRFKN----RELQIMRIVKHPNVVD 96
Query: 244 LVGFCI---DPEQGLFL--IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
L F D + +FL + +YV H K T+P + +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL----KQTMPMLLIKLYMYQLLR 152
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWTSA--PSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KL DFG A A P+V +C
Sbjct: 153 SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNG-TTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y+S G L L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 95 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 145
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 146 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 208 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 207 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 263
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 264 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 315
Query: 328 IPKLCDFGLA--------TWTSAPSVPFLCKTVK 353
+ K+ DFGLA WT+ ++ F T+K
Sbjct: 316 VCKIADFGLARVGAKFPIKWTAPEAINFGSFTIK 349
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 155
Query: 243 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV E + R TLP +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASSLHHPN 240
FS R +G G+ V+ + VAIK++ K+S++ + +E+ L HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGS---LERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
+ G C E +L+ +Y G + LE H KK ++ V G
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIA------AVTHGAL 164
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 348
+ +AYLH+ ++HRD+K NILLS + KL DFG A+ AP+ F+
Sbjct: 165 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS-IMAPANXFV 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 16 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ + ++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFL----KGETGKYLRLPQLV--DMAAQIASGMAYVERMN- 124
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 125 --YVHRDLRAANILVGENLVCKVADFGLA 151
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 241
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 242 VPLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 114
Query: 243 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV E + R TLP +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 241
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 242 VPLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 112
Query: 243 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 168
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 245
VLG GA S V + + VAIK + K E KE S E+ + + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 246 GFCIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
E G L+LI + VSGG L + EK +++ ++ + ++V YL
Sbjct: 83 DIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYL 132
Query: 304 HNGTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPSV 345
H+ +VHRD+KP N+L L + DFGL+ SV
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y++ GSL L KG G LP V ++ IA +AY+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL----KGETGKYLRLPQLV--DMSAQIASGMAYVERMN- 131
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK 350
VHRD++ +NIL+ + K+ DFGLA WT+ F K
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK 177
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 239
++ G LG G V G+ L VA+K L+++ S RE+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIA 297
+I+ L P F++ +YVSGG L ++ H + + + ++ I
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEAR---------RLFQQIL 121
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+V Y H VVHRD+KP N+LL + K+ DFGL+ S
Sbjct: 122 SAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 239
++ G LG G V G+ L VA+K L+++ S RE+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIA 297
+I+ L P F++ +YVSGG L ++ H + + + ++ I
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEAR---------RLFQQIL 121
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+V Y H VVHRD+KP N+LL + K+ DFGL+ S
Sbjct: 122 SAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 134 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 193 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 183 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 233
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 234 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 280
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 281 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 337 A 337
+
Sbjct: 197 S 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 183 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 233
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 234 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 280
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 281 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 337 A 337
+
Sbjct: 197 S 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 207 RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGG 265
+ VAIK L + +K ++ RE I L +P IV L+G C + L L+ + GG
Sbjct: 37 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGG 94
Query: 266 SLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSS 325
L + L K++ + ++ + ++V++G+ YL E+ VHRD+ N+LL +
Sbjct: 95 PLHKFLVGKREEIPVSNVA--ELLHQVSMGMK----YLE---EKNFVHRDLAARNVLLVN 145
Query: 326 KKIPKLCDFGLA 337
+ K+ DFGL+
Sbjct: 146 RHYAKISDFGLS 157
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 184 FSKGRVLGRGALSFVF--KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNI 241
+ + + LG GA V + KV + ++ I R S+ E+ + L HPNI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ L F D ++ +L+ + GG L + + K ++ + + + V
Sbjct: 99 MKLYDFFED-KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVT 150
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT 338
YLH + +VHRD+KP N+LL SK+ + K+ DFGL+
Sbjct: 151 YLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 208 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
T VA+K L K+ S AF E + L H +V L + + ++ +++I +Y+ GSL
Sbjct: 38 TKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSL 94
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
L + G++ L + +A IAE +A++ ER +HRD++ +NIL+S
Sbjct: 95 VDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTL 146
Query: 328 IPKLCDFGLA 337
K+ DFGLA
Sbjct: 147 SCKIADFGLA 156
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 82 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 141 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 308
E+ ++++ +Y++ GSL L KG G LP V ++ IA +AY+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL----KGETGKYLRLPQLV--DMSAQIASGMAYVERMN- 131
Query: 309 RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
VHRD++ +NIL+ + K+ DFGLA
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLA 158
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 248 -----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
++ Q ++L+ + + +L + + + R + L Y++ GI +
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLL-----YQMLXGIK----H 134
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFC 362
LH+ ++HRD+KPSNI++ S K+ DFGLA +T +F P+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA------------RTAGTSFMMTPYV 179
Query: 363 IEEWQR 368
+ + R
Sbjct: 180 VTRYYR 185
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 86 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 145 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 36 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 145
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 75 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 124
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+HRD+ N L++ + + K+ DFGL+ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 16 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 74 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 123
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+HRD+ N L++ + + K+ DFGL+ +
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 154
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 85 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 144 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMIASSLHH 238
NF RVLG+G+ V +V A+K L K+ D + + +++ + +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
P + L C LF + ++V+GG L H+ + ++ + A I
Sbjct: 84 PFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-------YAAEIIS 135
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ +LH+ + +++RD+K N+LL + KL DFG+
Sbjct: 136 ALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGM 170
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 55 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 164
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+F + VLG+GA V K + L AIK++ + +E E+M+ +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 243 --------------PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
P+ + + LF+ +Y +L +H + + +
Sbjct: 66 RYYAAWLERRNFVKPMT--AVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY----- 118
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+++ I E+++Y+H+ + ++HRD+KP NI + + K+ DFGLA
Sbjct: 119 -WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 36 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 145
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 12 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 70 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 119
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+HRD+ N L++ + + K+ DFGL+ +
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 150
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 37 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 146
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 75 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 124
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+HRD+ N L++ + + K+ DFGL+ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 37 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 146
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED---KESSKAFCRELMIASSLH 237
+ + + + LG GA V K L AIK + K +S A E+ + L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPNI+ L F D ++ +L+ + GG L + ++K S + +V K L
Sbjct: 63 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIMKQVLS-- 115
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT 338
YLH +VHRD+KP N+LL SK + K+ DFGL+
Sbjct: 116 -GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSA 155
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 241
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 242 VPLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLA 337
S+AY+H+ + HRDIKP N+LL + KLCDFG A
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 181 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
T ++ LG+GA S V + K + I K + RE I L H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 90 PNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIHQILE 141
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
SV ++H + +VHRD+KP N+LL+SK KL DFGLA
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 29 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 138
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 32 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 141
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 35 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 34 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 143
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 56 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 165
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
YL + VHRD+ N +L K K+ DFGLA
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 149 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 203
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 204 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 256
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 126
Query: 257 LIYKYVSGGSLERHLHEKKKGVR-------GNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+I +Y G L L K + + NST + +A+ +A+L ++
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL--ASKN 184
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
C+ HRD+ N+LL++ + K+ DFGLA
Sbjct: 185 CI-HRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 188 RVLGRGALSFVFK---------GKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
RVLG+G VF+ GK+ +L+ ++ ++ + +D +KA E I
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKDTAHTKA---ERNILEE 77
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
+ HP IV L+ + L+LI +Y+SGG L L +++G+ T + +
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE----- 129
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I+ ++ +LH ++ +++RD+KP NI+L+ + KL DFGL
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 24/152 (15%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPE 252
G V+K + A K +D + +E + + E+ I +S HPNIV L+ E
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYYE 79
Query: 253 QGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
L+++ ++ +GG+ LER L E + V TL +++ YLH+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNYLHD 126
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++HRD+K NIL + KL DFG++
Sbjct: 127 NK---IIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 188 RVLGRGALSFVFK---------GKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
RVLG+G VF+ GK+ +L+ ++ ++ + +D +KA E I
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKDTAHTKA---ERNILEE 77
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
+ HP IV L+ + L+LI +Y+SGG L L +++G+ T + +
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE----- 129
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I+ ++ +LH ++ +++RD+KP NI+L+ + KL DFGL
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 285
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 286 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 17 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 73 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 124
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HR+++ +NIL+S K+ DFGLA
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA 152
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 95
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 151
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 88
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 144
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 77
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 133
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 185
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 84
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 140
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 88
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 144
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 80
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F E L L+ YV H R TLP +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 136
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLC 349
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 188
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED---KESSKAFCRELMIASSLH 237
+ + + + LG GA V K L AIK + K +S A E+ + L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPNI+ L F D ++ +L+ + GG L + ++K ++ + + +
Sbjct: 80 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVL 131
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLAT 338
YLH +VHRD+KP N+LL SK + K+ DFGL+
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSA 172
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 110
Query: 243 PLVGFCID-----PEQGLFLIYKYVSGG--SLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
L F E L L+ YV + RH R TLP
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS------RAKQTLPVIYVKLYMYQ 164
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLC 349
+ S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK---------EDKESSKAFCRELM--- 231
+ K R LG GA V K + AIK + K +D ++ + F E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 232 -IASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ SL HPNI+ L + ++ +L+ ++ GG L + + K ++
Sbjct: 98 SLLKSLDHPNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA------- 149
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI---PKLCDFGLATWTS 341
+ I + YLH + +VHRDIKP NILL +K K+ DFGL+++ S
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 23/178 (12%)
Query: 173 SYGEILAATHNFSKG---------RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDK 220
+Y + A H F+K RV+G G V G++ G VAIK L
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 221 ESSKA-FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 279
E + F E I HPNI+ L G + + + ++ +Y+ GSL+ L +K G
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEG-VVTKSKPVMIVTEYMENGSLDTFL-KKNDGQF 121
Query: 280 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
L +R GI+ + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 122 TVIQLVGMLR-----GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 248
+GRG+ V R A K++ K E F +E+ I SL HPNI+ L
Sbjct: 33 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-T 91
Query: 249 IDPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+ ++L+ + +GG L ER +H K+ R + ++ + +VAY H
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAA------RIMKDVLSAVAYCHKLN 143
Query: 308 ERCVVHRDIKPSNILL--SSKKIP-KLCDFGLA 337
V HRD+KP N L S P KL DFGLA
Sbjct: 144 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 99
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 100 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 158
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 159 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 206
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 207 DFGLA------------RTAGTSFMMTPYVVTRYYR 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 38 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 147
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 38 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 147
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVR--------GNSTLPWSV 288
H NI+ L+G C + L++I +Y S G+L +L ++ G+ L
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 32/192 (16%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 241
+ + + +G GA V +L +VA+K+L + +++ +K REL++ ++H NI
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 242 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
+ L+ ++ Q ++L+ + + +L + +H + R + L Y++ GI
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL-----YQMLCGI 137
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 356
+LH+ ++HRD+KPSNI++ S K+ DFGLA +T F
Sbjct: 138 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTASTNF 178
Query: 357 GQNPFCIEEWQR 368
P+ + + R
Sbjct: 179 MMTPYVVTRYYR 190
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 149 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 203
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 5 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 59
Query: 204 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 256
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 60 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 118
Query: 257 LIYKYVSGGSLERHLHEKKKG-VRGNSTLPWSVRYKVALG--IAESVAYLHNGTERCVVH 313
+I +Y G L L K + + P +R + +A+ +A+L ++ C+ H
Sbjct: 119 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCI-H 175
Query: 314 RDIKPSNILLSSKKIPKLCDFGLA 337
RD+ N+LL++ + K+ DFGLA
Sbjct: 176 RDVAARNVLLTNGHVAKIGDFGLA 199
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
VLG GA S VF K L A+K + K + E+ + + H NIV L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+ +L+ + VSGG L + E+ +++L V + +V YLH
Sbjct: 75 -YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLH--- 123
Query: 308 ERCVVHRDIKPSNIL-LSSKKIPK--LCDFGLA 337
E +VHRD+KP N+L L+ ++ K + DFGL+
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 149 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 203
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 204 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 256
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 126
Query: 257 LIYKYVSGGSLERHLHEKKKG-VRGNSTLPWSVRYKVALG--IAESVAYLHNGTERCVVH 313
+I +Y G L L K + + P +R + +A+ +A+L ++ C+ H
Sbjct: 127 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCI-H 183
Query: 314 RDIKPSNILLSSKKIPKLCDFGLA 337
RD+ N+LL++ + K+ DFGLA
Sbjct: 184 RDVAARNVLLTNGHVAKIGDFGLA 207
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 42 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 151
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-----AFCRELMIASSLHH 238
+ K LG G + V+K + VAIK++ + +K RE+ + L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGV--RGNSTL--PWSVRYKVAL 294
PNI+ GL + + S SL E V + NS + P ++ + +
Sbjct: 72 PNII-----------GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 352
+ + + YLH + ++HRD+KP+N+LL + KL DFGLA +P+ + + V
Sbjct: 121 TL-QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 37 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 146
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
+GRG+ V R A K++ K E F +E+ I SL HPNI+ L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-TF 75
Query: 250 DPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 308
+ ++L+ + +GG L ER +H K+ R + ++ + +VAY H
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVH--KRVFRESDAA------RIMKDVLSAVAYCHKLN- 126
Query: 309 RCVVHRDIKPSNILL--SSKKIP-KLCDFGLA 337
V HRD+KP N L S P KL DFGLA
Sbjct: 127 --VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVR--------GNSTLPWSV 288
H NI+ L+G C + L++I +Y S G+L +L ++ G+ L
Sbjct: 78 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 137 LVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 188 RVLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNI 241
V+GRG V+ G LL + A+K L++ D F E +I HPN+
Sbjct: 95 EVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAES 299
+ L+G C+ E ++ Y+ G L + N T +V+ + G +A+
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKG 204
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +L + VHRD+ N +L K K+ DFGLA
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 35 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 72 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V+ G T VAIK L K S ++F E I L H +V L + +
Sbjct: 17 LGNGQFGEVWMGTWNG-NTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E+ ++++ +Y++ GSL L K G LP V +A +A +AY+ ER
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLV--DMAAQVAAGMAYI----ER 123
Query: 310 C-VVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRD++ +NIL+ + I K+ DFGLA
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLA 152
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA------FCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA------FCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 189 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 242
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 37 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 300
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 146
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+L + VHRD+ N +L K K+ DFGLA
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 72 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 27/182 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V+K K A K ++ + +E + + E+ I ++ HP IV L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ L+++ ++ GG+++ + E +G+ V + E++ +LH+ +
Sbjct: 87 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI------QVVCRQMLEALNFLHS---K 136
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLAT----------------WTSAPSVPFLCKTVK 353
++HRD+K N+L++ + +L DFG++ + AP V +C+T+K
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV-VMCETMK 195
Query: 354 GT 355
T
Sbjct: 196 DT 197
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
LG+GA S V + L A K ++ K + RE I L HPNIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 88
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
I E +LI+ V+GG L + ++ +++ I E+V + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCH--- 138
Query: 308 ERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
+ VVHRD+KP N+LL+SK KL DFGLA
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLH 237
K +VLG GA V+KG ++ VAIK L + +++K E + + +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
P + L+G C+ + L+ + + G L H+ E + + L W ++ IA
Sbjct: 78 SPYVSRLLGICL--TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IA 129
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ ++YL + +VHRD+ N+L+ S K+ DFGLA
Sbjct: 130 KGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 27/182 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V+K K A K ++ + +E + + E+ I ++ HP IV L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ L+++ ++ GG+++ + E +G+ V + E++ +LH+ +
Sbjct: 79 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI------QVVCRQMLEALNFLHS---K 128
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLAT----------------WTSAPSVPFLCKTVK 353
++HRD+K N+L++ + +L DFG++ + AP V +C+T+K
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV-VMCETMK 187
Query: 354 GT 355
T
Sbjct: 188 DT 189
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA------FCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 243 PLVGFCIDPEQG-----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
L F + L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLA 337
S+AY+H+ + HRDIKP N+LL + KLCDFG A
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 72 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 130 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 157
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 99
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 100 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 158
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 159 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 206
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 207 DFGLA------------RTAGTSFMMTPYVVTRYYR 230
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 121
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 122 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 169
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 170 DFGLA------------RTAGTSFMMTPYVVTRYYR 193
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 78 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 136 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 163
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 169 DFGLA------------RTAGTSFMMTPYVVTRYYR 192
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 1 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 60
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 61 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 119
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 120 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 167
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 168 DFGLA------------RTAGTSFMMTPYVVTRYYR 191
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 161 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 217
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 272
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 121
Query: 273 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 332
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 122 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 169
Query: 333 DFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
DFGLA +T +F P+ + + R
Sbjct: 170 DFGLA------------RTAGTSFMMTPYVVTRYYR 193
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 103 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 161 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 188
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 208 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 213 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 269
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 270 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 321
Query: 328 IPKLCDFGLA 337
+ K+ DFGLA
Sbjct: 322 VCKIADFGLA 331
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 32/192 (16%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 241
+ + + +G GA V +L +VA+K+L + +++ +K REL++ ++H NI
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 242 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 296
+ L+ ++ Q ++L+ + + +L + +H + R + L Y++ GI
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL-----YQMLCGI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 356
+LH+ ++HRD+KPSNI++ S K+ DFGLA +T F
Sbjct: 140 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTACTNF 180
Query: 357 GQNPFCIEEWQR 368
P+ + + R
Sbjct: 181 MMTPYVVTRYYR 192
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 77 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 135 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 162
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA------FCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 166 ANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKES 222
AN + G+ + + +G GA V +L +VAIK+L + +++
Sbjct: 1 ANQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 223 SKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKG 277
+K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + + +
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDH 119
Query: 278 VRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+ DFGLA
Sbjct: 120 ERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 167
Query: 338 TWTSAPSVPFLCKTVKGTFGQNPFCIEEWQR 368
+T +F P+ + + R
Sbjct: 168 ------------RTAGTSFMMTPYVVTRYYR 186
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 80 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 138 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 165
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHP 239
+ K +G G VFK K VA+KR LD +D+ + RE+ + L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NIV L + ++ L L++++ KK N L + + +
Sbjct: 62 NIVRLHD-VLHSDKKLTLVFEFCDQDL-------KKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + H+ R V+HRD+KP N+L++ KL DFGLA P
Sbjct: 114 LGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 118
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW A +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGT 201
Query: 345 VPFLCKTVKGTFGQNPFCIEEW 366
+L + + G N ++ W
Sbjct: 202 PEYLAPEIILSKGYNK-AVDWW 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 229 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL--P 285
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +R L +A + + V+HRD+KP+N+ L K+ KL DFGLA
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 63/214 (29%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 285
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 146
Query: 286 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 307
++ YK L + + Y + G
Sbjct: 147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 206
Query: 308 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 207 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 63/214 (29%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 285
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 153
Query: 286 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 307
++ YK L + + Y + G
Sbjct: 154 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 213
Query: 308 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 214 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 247
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 63/214 (29%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 285
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 151
Query: 286 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 307
++ YK L + + Y + G
Sbjct: 152 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 211
Query: 308 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 212 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 229 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 287
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 288 VRYKVALGIAESVAYLHNGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V + ++ H ++ V+HRD+KP+N+ L K+ KL DFGLA
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 190 LGRGALSFV---FKGKVGLLRTSVAI--KRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG+GA S V K G + I K+L D + + RE I L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 68
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
I E +L++ V+GG L + ++ +++ I ESV + H
Sbjct: 69 HD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCH 120
Query: 305 -NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
NG +VHRD+KP N+LL+SK KL DFGLA
Sbjct: 121 LNG----IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 174 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLL---RTSVAIKRLDKEDKESSK-AFCRE 229
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 230 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 147
Query: 290 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 229 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL--P 285
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +R L +A + + V+HRD+KP+N+ L K+ KL DFGLA
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 63/214 (29%)
Query: 187 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 239
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 25 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 84
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 285
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 85 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 144
Query: 286 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 307
++ YK L + + Y + G
Sbjct: 145 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 204
Query: 308 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 205 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 84
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 139
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 140 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 184
Query: 367 QR 368
R
Sbjct: 185 YR 186
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
V YLH+ + H D+KP NI+L + +P K+ DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 455 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+SS KL DFGL+ +
Sbjct: 513 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRY 540
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 95
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 150
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 151 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 195
Query: 367 QR 368
R
Sbjct: 196 YR 197
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G V GK + VA+K + KE S F +E L HP +V G C
Sbjct: 16 LGSGQFGVVKLGKWKG-QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC- 72
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
E ++++ +Y+S G L +L KG+ + L ++ + E +A+L +
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL------EMCYDVCEGMAFLESHQ-- 124
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLATWT 340
+HRD+ N L+ K+ DFG+ +
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 92
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 147
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA--TWTSAPSVPFLC 349
++HRD+KPSNI++ S K+ DFGLA TS VPF+
Sbjct: 148 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV 189
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIV-----P 243
LG G +V + VAIK+ +E ++ + +C E+ I L+HPN+V P
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK--GVRGNSTLPWSVRYKVALGIAESVA 301
+ P L +Y GG L ++L++ + G++ +R ++ I+ ++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLS-DISSALR 136
Query: 302 YLHNGTERCVVHRDIKPSNILLS---SKKIPKLCDFGLA 337
YLH E ++HRD+KP NI+L + I K+ D G A
Sbjct: 137 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 208 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 40 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 96
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 97 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 148
Query: 328 IPKLCDFGLA 337
+ K+ DFGLA
Sbjct: 149 VCKIADFGLA 158
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIA-SSLHHPNIVPLVGF 247
LGRGA V K + +A+KR+ + + K +L I+ ++ P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 119 LF--REGDVWICMELMDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 171
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
+ V+HRD+KPSN+L+++ K+CDFG++ +
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIV-----P 243
LG G +V + VAIK+ +E ++ + +C E+ I L+HPN+V P
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK--GVRGNSTLPWSVRYKVALGIAESVA 301
+ P L +Y GG L ++L++ + G++ +R ++ I+ ++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLS-DISSALR 135
Query: 302 YLHNGTERCVVHRDIKPSNILLS---SKKIPKLCDFGLA 337
YLH E ++HRD+KP NI+L + I K+ D G A
Sbjct: 136 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 248 -----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
++ Q ++L+ + + +L + + + R + L Y++ GI +
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLL-----YQMLCGIK----H 134
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFC 362
LH+ ++HRD+KPSNI++ S K+ DFGLA +T +F P+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYV 179
Query: 363 IEEWQR 368
+ + R
Sbjct: 180 VTRYYR 185
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 190 LGRGALSFV---FKGKVGLLRTSVAI--KRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG+GA S V K G + I K+L D + + RE I L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 68
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
I E +L++ V+GG L + ++ +++ I ESV + H
Sbjct: 69 HD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCH 120
Query: 305 -NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
NG +VHRD+KP N+LL+SK KL DFGLA
Sbjct: 121 LNG----IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 248 -----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
++ Q ++L+ + + +L + + + R + L Y++ GI +
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLL-----YQMLCGIK----H 135
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFC 362
LH+ ++HRD+KPSNI++ S K+ DFGLA +T +F P+
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYV 180
Query: 363 IEEWQR 368
+ + R
Sbjct: 181 VTRYYR 186
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVRG----NSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ G+ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 190 LGRGALSFVFKGKV-----GLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPNIVP 243
LG V+KG + G +VAIK L DK + + F E M+ + L HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHL-----HEKKKGVRGNSTL-----PWSVRYKVA 293
L+G + +Q L +I+ Y S G L L H + T+ P + VA
Sbjct: 94 LLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
IA + YL + VVH+D+ N+L+ K K+ D GL
Sbjct: 153 -QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 91
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 146
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 147 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 191
Query: 367 QR 368
R
Sbjct: 192 YR 193
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIA-SSLHHPNIVPLVGF 247
LGRGA V K + +A+KR+ + + K +L I+ ++ P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 75 LF--REGDVWICMELMDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 127
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
+ V+HRD+KPSN+L+++ K+CDFG++ +
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 188 RVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
R LG GA VF + L + VA+K L + K F RE + ++L H +IV
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGV---------RGNSTLPWSVRYKVA 293
G C D + L ++++Y+ G L + L + L S +A
Sbjct: 81 KFYGVCGDGDP-LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
IA + YL + VHRD+ N L+ + + K+ DFG++
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFCIEEW 366
++HRD+KPSNI++ S K+ DFGLA +T +F P+ + +
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMTPYVVTRY 190
Query: 367 QR 368
R
Sbjct: 191 YR 192
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAF--CRELMIASSLH---HPNI 241
+G GA VFK + L+ VA+KR+ + E RE+ + L HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 242 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 296
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +LH+ VVHRD+KP NIL++S KL DFGLA
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 207 RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGG 265
+ VAIK L + +K ++ RE I L +P IV L+G C + L L+ + GG
Sbjct: 363 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGG 420
Query: 266 SLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSS 325
L + L K++ + ++ + ++V++G+ YL E+ VHR++ N+LL +
Sbjct: 421 PLHKFLVGKREEIPVSNVA--ELLHQVSMGMK----YLE---EKNFVHRNLAARNVLLVN 471
Query: 326 KKIPKLCDFGLA 337
+ K+ DFGL+
Sbjct: 472 RHYAKISDFGLS 483
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 59 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 167
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL------ATWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG ATWT +
Sbjct: 168 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGT 222
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 223 PEYLAPEIILSKGYN 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 176 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELM 231
+I +F ++LG+G+ VF + AIK L K+ D + + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 232 IASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
++ + HP + + FC ++ LF + +Y++GG L H+ K +T
Sbjct: 72 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF------ 123
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
A I + +LH+ + +V+RD+K NILL K+ DFG+
Sbjct: 124 -YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 184 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 232
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 79
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
SL +P++V GF D + ++++ + SL LH+++K V T P RY +
Sbjct: 80 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEP-EARYFM 132
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 133 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT 174
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
+ H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLA 173
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 184 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 232
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
SL +P++V GF D + ++++ + SL LH+++K V T P + RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEPEA-RYFM 148
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF- 247
+ RG V+K + L+ VA+K +DK+S ++ RE+ + H N++ +
Sbjct: 22 IKARGRFGCVWKAQ--LMNDFVAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAAE 78
Query: 248 --CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ E L+LI + GSL +L +GN + W+ VA ++ ++YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL-------KGN-IITWNELCHVAETMSRGLSYLHE 130
Query: 306 GTERC--------VVHRDIKPSNILLSSKKIPKLCDFGLAT 338
C + HRD K N+LL S L DFGLA
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 190 LGRGALSFVFKGKV-----GLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPNIVP 243
LG V+KG + G +VAIK L DK + + F E M+ + L HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHL-----HEKKKGVRGNSTL-----PWSVRYKVA 293
L+G + +Q L +I+ Y S G L L H + T+ P + VA
Sbjct: 77 LLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
IA + YL + VVH+D+ N+L+ K K+ D GL
Sbjct: 136 -QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 184 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 232
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
SL +P++V GF D + ++++ + SL LH+++K V T P + RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEPEA-RYFM 148
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I + L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 184 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 232
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
SL +P++V GF D + ++++ + SL LH+++K V T P + RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEPEA-RYFM 148
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 237
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 238 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + +LH C+VHRD+KP NIL++S KL DFGLA
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 237
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 238 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + +LH C+VHRD+KP NIL++S KL DFGLA
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHH-PNIVPLVGF 247
+G G V+K + +A+K++ + +KE +K +L + H P IV G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
I +F+ + + G+ L ++ +G +P + K+ + I +++ YL
Sbjct: 93 FIT-NTDVFIAMELM--GTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKE-- 142
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ V+HRD+KPSNILL + KLCDFG++
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 237
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 238 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + +LH C+VHRD+KP NIL++S KL DFGLA
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAF--CRELMIASSLH---HPNI 241
+G GA VFK + L+ VA+KR+ + E RE+ + L HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 242 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 296
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +LH+ VVHRD+KP NIL++S KL DFGLA
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAF--CRELMIASSLH---HPNI 241
+G GA VFK + L+ VA+KR+ + E RE+ + L HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 242 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 296
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +LH+ VVHRD+KP NIL++S KL DFGLA
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+S+ KL DFGL+ +
Sbjct: 133 ---------VHRDIAARNVLVSATDCVKLGDFGLSRY 160
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 138 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 138
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 139 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 129
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 130 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 168
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TWT + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 131 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 190 LGRGALSFV---FKGKVGLLRTSVAI--KRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG+GA S V K G ++ I K+L D + + RE I L HPNIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 75
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
I E +LI+ V+GG L + ++ +++ I E+V + H
Sbjct: 76 HD-SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCH 127
Query: 305 NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
+ VVHR++KP N+LL+SK KL DFGLA
Sbjct: 128 ---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 131 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 138 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 187 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIV 242
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 455 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
VHRDI N+L+S+ KL DFGL+ +
Sbjct: 513 ---------VHRDIAARNVLVSATDCVKLGDFGLSRY 540
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIAS-SLHHPNIVPLVGF 247
LGRGA V K + A+KR+ + + K +L I+ ++ P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 102 LF--REGDVWICXELXDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 154
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
+ V+HRD+KPSN+L+++ K CDFG++ +
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGY 186
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 233
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 234 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 65 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 116
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ E + LH +VHRD+KP NILL KL DFG +
Sbjct: 117 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 80 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 131
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 132 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 84 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 135
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TWT + +L
Sbjct: 136 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLA 192
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 193 PEIILSKGYN 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 233
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 234 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 78 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 129
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ E + LH +VHRD+KP NILL KL DFG +
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 233
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 234 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 78 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 129
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ E + LH +VHRD+KP NILL KL DFG +
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 190 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR----GNSTLPWSVRYKVALGIAESV 300
G C + + L ++++Y+ G L R L + G P + L +A V
Sbjct: 109 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 301 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A YL VHRD+ N L+ + K+ DFG++
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 71 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 243
V+G+GA S V + A+K +D SS RE I L HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 91 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 304 HNGTERCVVHRDIKPSNILLSSKK--IP-KLCDFGLA 337
H+ ++HRD+KP N+LL+SK+ P KL DFG+A
Sbjct: 147 HDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 176 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELM 231
+I +F ++LG+G+ VF + AIK L K+ D + + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 232 IASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
++ + HP + + FC ++ LF + +Y++GG L H+ K +T
Sbjct: 71 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF------ 122
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
A I + +LH+ + +V+RD+K NILL K+ DFG+
Sbjct: 123 -YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 210 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 267
VA+K L + + + +E+ I +L+H +I+ G C D E+ L L+ +YV GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+L G+ + A I E +AYLH+ + +HR++ N+LL + +
Sbjct: 106 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDR 154
Query: 328 IPKLCDFGLA 337
+ K+ DFGLA
Sbjct: 155 LVKIGDFGLA 164
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 190 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLH----EKKKGVRGNSTLPWSVRYKVALGIAESV 300
G C + + L ++++Y+ G L R L + K G P + L +A V
Sbjct: 80 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 301 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A YL VHRD+ N L+ + K+ DFG++
Sbjct: 139 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
+ H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 189 VLGRGALSFVFKGKVGLLR-TSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVG 246
+LG GA + V +G V L A+K ++K+ S RE+ + + NI+ L+
Sbjct: 20 LLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 247 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
F D + +L+++ + GGS+ H+ ++K ++ +V +A ++ +LH
Sbjct: 79 FFED-DTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-------RVVRDVAAALDFLHT- 129
Query: 307 TERCVVHRDIKPSNILLSS--KKIP-KLCDFGLAT 338
+ + HRD+KP NIL S K P K+CDF L +
Sbjct: 130 --KGIAHRDLKPENILCESPEKVSPVKICDFDLGS 162
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 190 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLH----EKKKGVRGNSTLPWSVRYKVALGIAESV 300
G C + + L ++++Y+ G L R L + K G P + L +A V
Sbjct: 86 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 301 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A YL VHRD+ N L+ + K+ DFG++
Sbjct: 145 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 86 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 137
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 138 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 246
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 247 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ HRDIKP N+LL + K+ DFGLAT
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 86 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 137
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 138 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHP 239
+ K +G G VFK K VA+KR LD +D+ + RE+ + L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
NIV L + ++ L L++++ KK N L + + +
Sbjct: 62 NIVRLHD-VLHSDKKLTLVFEFCDQDL-------KKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+ + H+ R V+HRD+KP N+L++ KL +FGLA P
Sbjct: 114 LGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGT 201
Query: 345 VPFLCKTVKGTFGQNPFCIEEW 366
+L + + G N ++ W
Sbjct: 202 PEYLAPEIILSKGYNK-AVDWW 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 80 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 131
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 132 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 167 NSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKE 221
N +R EI A+ K V+G G V G++ G VAIK L DK+
Sbjct: 16 NQAVREFAKEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F E I HPNI+ L G + + + +I +Y+ GSL+ L + G
Sbjct: 74 R-RDFLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFLRKND----GR 127
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
T+ V + GI + YL ++ VHRD+ NIL++S + K+ DFG++
Sbjct: 128 FTVIQLV--GMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + ++ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFGLA 204
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + R LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW + +L
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLL---RTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +HRD+ N+LL+++ + K+ DFGL
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQNPFCIEEW 366
+L + + G N ++ W
Sbjct: 202 PEYLAPAIILSKGYNK-AVDWW 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 152 WRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV-GL 205
W+ I+S E + I P +L Y E +N G+ LG GA V + GL
Sbjct: 1 WKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 55
Query: 206 LRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIY 259
+ VA+K L K A EL I S L H NIV L+G C + +I
Sbjct: 56 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VLVIT 114
Query: 260 KYVSGGSLERHLHEKKKGVRGNSTLP--------------WSVRYKVALG--IAESVAYL 303
+Y G L L K + + G S P +R + +A+ +A+L
Sbjct: 115 EYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL 174
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ C+ HRD+ N+LL++ + K+ DFGLA
Sbjct: 175 --ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLA 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 23/178 (12%)
Query: 173 SYGEILAATHNFSKG---------RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDK 220
+Y + A H F+K RV+G G V G++ G +VAIK L
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 221 ESSKA-FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 279
E + F E I HPN+V L G + + + ++ +++ G+L+ L +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEG-VVTRGKPVMIVIEFMENGALDAFLRKHD---- 139
Query: 280 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
G T+ V + GIA + YL + VHRD+ NIL++S + K+ DFGL+
Sbjct: 140 GQFTVIQLV--GMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 189 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPL 244
V+G G V +G++ G + VAIK L E + F E I HPNI+ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
G + + ++ +++ G+L+ L G T+ V + GIA + YL
Sbjct: 83 EGVVTN-SMPVMILTEFMENGALDSFLRLND----GQFTVIQLV--GMLRGIASGMRYL- 134
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ NIL++S + K+ DFGL+
Sbjct: 135 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V L + VAI+++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 189 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPL 244
V+G G V +G++ G + VAIK L E + F E I HPNI+ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
G + + ++ +++ G+L+ L G T+ V + GIA + YL
Sbjct: 81 EGVVTN-SMPVMILTEFMENGALDSFLRLND----GQFTVIQLV--GMLRGIASGMRYL- 132
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ NIL++S + K+ DFGL+
Sbjct: 133 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPN 240
N+ ++GRG+ +V+ +VAIK++++ ED K RE+ I + L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEK-KKGVRGNSTLPWSVRYKVALGIAES 299
I+ L I PE L Y+ + L + K + ++ Y + LG
Sbjct: 89 IIRLHDLII-PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG---- 143
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++H E ++HRD+KP+N LL+ K+CDFGLA
Sbjct: 144 EKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 25 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 79
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 80 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFY 133
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 134 --AAQIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGT 188
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 189 PEYLAPEIILSKGYN 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 69 KYYGSYLK-DTKLWIIMEYLGGGS---ALDLLEPGPLDETQIATILR-----EILKGLDY 119
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPFC 362
LH+ + +HRDIK +N+LLS KL DFG+A + + + TF PF
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNTFVGTPFW 170
Query: 363 I 363
+
Sbjct: 171 M 171
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 210 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 267
VA+K L + + + +E+ I +L+H +I+ G C D E+ L L+ +YV GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+L G+ + A I E +AYLH + +HR++ N+LL + +
Sbjct: 106 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDR 154
Query: 328 IPKLCDFGLA 337
+ K+ DFGLA
Sbjct: 155 LVKIGDFGLA 164
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 84 KYYGSYLK-DTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR-----EILKGLDY 134
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH+ + +HRDIK +N+LLS KL DFG+A
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 89 KYYGSYLK-DTKLWIIMEYLGGGS---ALDLLEPGPLDETQIATILR-----EILKGLDY 139
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGQNPF 361
LH+ + +HRDIK +N+LLS KL DFG+A + + + TF PF
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNTFVGTPF 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQNPFCIEEW 366
+L + + G N ++ W
Sbjct: 202 PEYLAPEIILSKGYNK-AVDWW 222
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 39 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 147
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 148 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 203 PEYLAPEIILSKGYN 217
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 167 NSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKE 221
N +R EI A+ K V+G G V G++ G VAIK L DK+
Sbjct: 1 NQAVREFAKEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 58
Query: 222 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 281
+ F E I HPNI+ L G + + + +I +Y+ GSL+ L + G
Sbjct: 59 R-RDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMIITEYMENGSLDAFLRKND----GR 112
Query: 282 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
T+ V + GI + YL ++ VHRD+ NIL++S + K+ DFG++
Sbjct: 113 FTVIQLV--GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 234 SSLHHPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 289
H NI+ + I+ + ++L+ ++ G L + L K N + + +
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLL---KTQHLSNDHICYFL- 150
Query: 290 YKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
Y++ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 151 YQILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLA 191
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 247
LG G V+K + +VAIKR L+ E++ RE+ + L H NI+ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS- 100
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
I L LI++Y ++ KK + N + V + V + H +
Sbjct: 101 VIHHNHRLHLIFEYAE--------NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH--S 150
Query: 308 ERCVVHRDIKPSNILL-----SSKKIPKLCDFGLA 337
RC+ HRD+KP N+LL S + K+ DFGLA
Sbjct: 151 RRCL-HRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 69 KYYGSYLK-DTKLWIIMEYLGGGS---ALDLLEPGPLDETQIATILR-----EILKGLDY 119
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH+ + +HRDIK +N+LLS KL DFG+A
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG GA V VG+ + +VA+K L D +++ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++HRD+KPSNI++ S K+ DFGLA
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++HRD+KPSNI++ S K+ DFGLA
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 140
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 141 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 161 SISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDK 220
S SP A SL + + F ++G G V+KG+ AIK +D
Sbjct: 4 SDSP-ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 221 ESSKAFCRELMIASSLHHPNIVPLVGFCI--DP---EQGLFLIYKYVSGGSLERHLHEKK 275
E + M+ HH NI G I +P + L+L+ ++ GS+ +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---- 118
Query: 276 KGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
K +GN+ + Y + I +++LH + V+HRDIK N+LL+ KL DFG
Sbjct: 119 KNTKGNTLKEEWIAY-ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 336 LAT 338
++
Sbjct: 175 VSA 177
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 24/167 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A I + YLH+ +++RD+KP N+L+ + ++ DFG A
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 33 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 87
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 88 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 141
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 142 --AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 196
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 197 PEYLAPEIILSKGYN 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 163 SPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFK---GKVGLLRTSVAIKRLDKED 219
+P + ++ G + + + SK +LG G V K GL + IK +D
Sbjct: 71 APFDHRIVTAKQGAV-NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129
Query: 220 KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 279
KE K E+ + + L H N++ L + + + L+ +YV GG L + ++ +
Sbjct: 130 KEEVK---NEISVMNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGELFDRIIDESYNLT 185
Query: 280 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSK--KIPKLCDFGLA 337
T+ + + I E + ++H + ++H D+KP NIL ++ K K+ DFGLA
Sbjct: 186 ELDTILFMKQ------ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFAEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ V+KG + VAIK +D +E ++ + +E+ + S P I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G + + L++I +Y+ GGS L K G + + +R I + + Y
Sbjct: 81 RYFGSYLKSTK-LWIIMEYLGGGSA---LDLLKPGPLEETYIATILR-----EILKGLDY 131
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH +ER + HRDIK +N+LLS + KL DFG+A
Sbjct: 132 LH--SERKI-HRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 189 VLGRGALSFVFK-------GKVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLH-HP 239
V+GRG S V + + + V +RL E +E +A RE I + HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
+I+ L+ + +FL++ + G L +L EK L + + E+
Sbjct: 161 HIITLID-SYESSSFMFLVFDLMRKGELFDYLTEK-------VALSEKETRSIMRSLLEA 212
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V++LH +VHRD+KP NILL +L DFG +
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 153 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 212
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 47 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 104
Query: 213 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 161
Query: 270 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 162 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 328 IPKLCDFGLATWTSAPSVPFLCKTVKGT 355
KL DFG + + C T GT
Sbjct: 211 HLKLADFGTCMKMNKEGM-VRCDTAVGT 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV+GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 228 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
RE+ I +L+H +IV G C D E+ + L+ +YV GSL +L G+
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-------- 111
Query: 287 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ A I E +AYLH + +HR + N+LL + ++ K+ DFGLA
Sbjct: 112 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 152
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA
Sbjct: 153 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 191
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 248 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 306
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 307 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++HRD+KPSNI++ S K+ DFGLA
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 25/161 (15%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVG-- 246
V RG V+K + LL VA+K +DK+S + E+ + H NI+ +G
Sbjct: 31 VKARGRFGCVWKAQ--LLNEYVAVKIFPIQDKQSWQNE-YEVYSLPGMKHENILQFIGAE 87
Query: 247 ---FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+D + L+LI + GSL L + + W+ +A +A +AYL
Sbjct: 88 KRGTSVDVD--LWLITAFHEKGSLSDFLKA--------NVVSWNELCHIAETMARGLAYL 137
Query: 304 H-------NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
H +G + + HRDIK N+LL + + DFGLA
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 243
+V+G G V G + G VAIK L E + F E I HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + + +I +++ GSL+ L + G T+ V + GIA + YL
Sbjct: 99 LEG-VVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLV--GMLRGIAAGMKYL 151
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW----TSAPS 344
+ VHRD+ NIL++S + K+ DFGL+ + TS P+
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 210 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 267
VA+K L + + + +E+ I +L+H +I+ G C D L L+ +YV GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+L G+ + A I E +AYLH + +HRD+ N+LL + +
Sbjct: 123 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDR 171
Query: 328 IPKLCDFGLA 337
+ K+ DFGLA
Sbjct: 172 LVKIGDFGLA 181
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIILSKGYN 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 228 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
RE+ I +L+H +IV G C D E+ + L+ +YV GSL +L G+
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-------- 110
Query: 287 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ A I E +AYLH + +HR + N+LL + ++ K+ DFGLA
Sbjct: 111 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
+F + VLG+GA V K + L AIK++ + +E E+ + +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 243 PLVG------------FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + LF+ +Y +L +H + + + +
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY------W 119
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ I E+++Y+H+ + ++HR++KP NI + + K+ DFGLA
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 91 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 142
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 199
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 200 PEIILSKGYN 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 153 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 212
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 42 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 99
Query: 213 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 100 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 156
Query: 270 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 157 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
Query: 328 IPKLCDFGLATWTSAPSVPFLCKTVKGT 355
KL DFG + + C T GT
Sbjct: 206 HLKLADFGTCMKMNKEGM-VRCDTAVGT 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIV 242
+V+G G V G++ G VAIK L DK+ + F E I HPNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNII 72
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L G + + + +I +Y+ GSL+ L + G T+ V + GI + Y
Sbjct: 73 HLEGV-VTKCKPVMIITEYMENGSLDAFLRKND----GRFTVIQLV--GMLRGIGSGMKY 125
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
L ++ VHRD+ NIL++S + K+ DFG++
Sbjct: 126 L---SDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVR--------GNSTLPWSV 288
H NI+ L+G C + L++I +Y S G+L +L ++ G+ + +
Sbjct: 87 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 146 LVSCTYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFGLA 191
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+++ + ++ DFG A TW +
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 345 VPFLCKTVKGTFGQN 359
+L + + G N
Sbjct: 202 PEYLAPEIIISKGYN 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 153 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 212
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 47 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 104
Query: 213 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 161
Query: 270 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 162 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 328 IPKLCDFG 335
KL DFG
Sbjct: 211 HLKLADFG 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRL---DKEDKESSKAFCRELMIASSLHHPNIVPLVG 246
LG G S+V + A+KR+ +++D+E ++ RE + +HPNI+ LV
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ---READMHRLFNHPNILRLVA 93
Query: 247 FCIDPEQGL----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
+C+ E+G +L+ + G+L + K +GN + + + LGI +
Sbjct: 94 YCLR-ERGAKHEAWLLLPFFKRGTLWNEIERLKD--KGNFLTEDQILW-LLLGICRGLEA 149
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
+H + HRD+KP+NILL + P L D G
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 146 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 205 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 250
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 292
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 92 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 293 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 151 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 196
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 244 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
LH+ V+HRDIK NILL KL DFG
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 244 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 83 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
LH+ V+HRDIK NILL KL DFG
Sbjct: 133 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGF 163
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 226 FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-- 283
F EL I + + + + G + ++ +++IY+Y+ S+ + E + N T
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDE-VYIIYEYMENDSILK-FDEYFFVLDKNYTCF 147
Query: 284 LPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+P V + + S +Y+HN E+ + HRD+KPSNIL+ KL DFG + +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--- 202
Query: 344 SVPFLCKTVKGTFGQNPFCIEEW 366
+ K +KG+ G F E+
Sbjct: 203 ----VDKKIKGSRGTYEFMPPEF 221
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 211 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 269
A+K +DK ++ S+ E+++ HPNI+ L D + ++L+ + + GG L ++
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 325
L +K R S V I ++V YLH+ + VVHRD+KPSNIL +
Sbjct: 112 ILRQKFFSEREASF--------VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 326 KKIPKLCDFGLA 337
+ ++CDFG A
Sbjct: 161 PECLRICDFGFA 172
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 244 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
LH+ V+HRDIK NILL KL DFG
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 244 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
LH+ V+HRDIK NILL KL DFG
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 149 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 203
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 204 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 256
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GGPVL 126
Query: 257 LIYKYVSGGSLERHLHEKKKGVRGNSTLP-------WSVRYKVALG--IAESVAYLHNGT 307
+I +Y G L L K+ S P S R + +A+ +A+L +
Sbjct: 127 VITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL--AS 184
Query: 308 ERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ C+ HRD+ N+LL++ + K+ DFGLA
Sbjct: 185 KNCI-HRDVAARNVLLTNGHVAKIGDFGLA 213
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 230
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 59 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 167
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 344
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW +
Sbjct: 168 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 345 VPFLCKTVKGTFGQNPFCIEEW 366
+L + + G N ++ W
Sbjct: 223 PEYLAPEIILSKGYNK-AVDWW 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 187 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 237
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVR--------GNSTLPWSV 288
H NI+ L+G C + L++I +Y S G+L +L ++ G+ + +
Sbjct: 89 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 148 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA 193
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFGLA TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 91 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFY--AAQ 142
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 199
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 200 PEIILSKGYN 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 228 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
+E+ I L HPN+V LV DP E L+++++ V+ G + + + P
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------MEVPTLKPL 134
Query: 287 S---VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
S R+ + + + YLH + ++HRDIKPSN+L+ K+ DFG++
Sbjct: 135 SEDQARFYFQ-DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 17/141 (12%)
Query: 190 LGRGALSFVFKG---KVG----LLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
LG+G + +FKG +VG L T V +K LDK + S++F + S L H ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G C+ ++ + L+ ++V GSL+ +L + K + + W + +VA +A ++ +
Sbjct: 76 LNYGVCVCGDENI-LVQEFVKFGSLDTYLKKNKNCI----NILW--KLEVAKQLAAAMHF 128
Query: 303 LHNGTERCVVHRDIKPSNILL 323
L T ++H ++ NILL
Sbjct: 129 LEENT---LIHGNVCAKNILL 146
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 211 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 269
A+K +DK ++ S+ E+++ HPNI+ L D + ++L+ + + GG L ++
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 325
L +K R S V I ++V YLH+ + VVHRD+KPSNIL +
Sbjct: 112 ILRQKFFSEREASF--------VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 326 KKIPKLCDFGLA 337
+ ++CDFG A
Sbjct: 161 PECLRICDFGFA 172
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 119 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 170
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 227
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 228 PEIILSKGYN 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 177 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 232
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 233 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 243 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 295
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A I + ++HN R VV+RD+KP+NILL ++ D GLA
Sbjct: 296 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 177 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 232
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 233 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A I + ++HN R VV+RD+KP+NILL ++ D GLA
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
+ V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 159 ERSISP--VANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD 216
+R I P + +L S+G++ ATH ++ +V AL F+ + LL+ S R++
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKV----ALKFISRQ---LLKKSDMHMRVE 57
Query: 217 KEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK 276
RE+ L HP+I+ L P + ++ +Y +GG L ++ EKK+
Sbjct: 58 -----------REISYLKLLRHPHIIKLYDVITTP-TDIVMVIEY-AGGELFDYIVEKKR 104
Query: 277 GVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ I ++ Y H +VHRD+KP N+LL K+ DFGL
Sbjct: 105 MTEDEGR-------RFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGL 154
Query: 337 ATWTS 341
+ +
Sbjct: 155 SNIMT 159
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPN 240
N+ ++GRG+ +V+ +VAIK++++ ED K RE+ I + L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEK-KKGVRGNSTLPWSVRYKVALGIAES 299
I+ L I P+ L Y+ + L + K + ++ Y + LG
Sbjct: 87 IIRLYDLII-PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG---- 141
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++H E ++HRD+KP+N LL+ K+CDFGLA
Sbjct: 142 ENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
+ V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHP 239
+F+ VLG+G+ V AIK L K+ + + E + + L P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
+ + C L+ + +YV+GG L H+ + G P +V Y + I
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISIG-- 132
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ +LH +R +++RD+K N++L S+ K+ DFG+
Sbjct: 133 LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 177 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 232
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 233 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A I + ++HN R VV+RD+KP+NILL ++ D GLA
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 177 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 232
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 233 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A I + ++HN R VV+RD+KP+NILL ++ D GLA
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
+ V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
+ V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y+ GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
Query: 211 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 269
A+K +DK ++ ++ E+++ HPNI+ L D + ++++ + + GG L ++
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKD-VYDDGKYVYVVTELMKGGELLDK 106
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 325
L +K R S V I ++V YLH + VVHRD+KPSNIL +
Sbjct: 107 ILRQKFFSEREASA--------VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 326 KKIPKLCDFGLA 337
+ ++CDFG A
Sbjct: 156 PESIRICDFGFA 167
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 162 ISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDK 220
+ P + + G+ +++ + +G GA V + +T VAIK++ E +
Sbjct: 23 VGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQ 82
Query: 221 ESSKAFCRELMIASSLHHPNIVP----LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK 276
+ RE+ I H N++ L ++ + + Y+ +E L++ K
Sbjct: 83 TYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDV-----YIVQDLMETDLYKLLK 137
Query: 277 GVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ ++ Y++ G+ Y+H+ V+HRD+KPSN+L+++ K+CDFGL
Sbjct: 138 SQQLSNDHICYFLYQILRGLK----YIHSAN---VLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 337 A 337
A
Sbjct: 191 A 191
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y+ GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKED---KESSKAFCRELMI 232
++ +V+GRGA G+V L+R A+K L K + + S F E I
Sbjct: 74 AEDYDVVKVIGRGAF-----GEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 233 ASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--WSVR 289
+ + P +V L FC ++ L+++ +Y+ GG L + N +P W+
Sbjct: 129 MAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDL--------VNLMSNYDVPEKWAKF 178
Query: 290 YKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
Y AE V L ++HRD+KP N+LL KL DFG
Sbjct: 179 Y-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 237
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLA 337
+ V YLH + + H D+KP NI+L K IP KL DFGLA
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 224 KAFCRELMIASSLHHPNIVPLVGFCIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVR 279
K RE+ + + HHPNI+ L + E+ L+L+ + + L + +H+++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVIS 132
Query: 280 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
+ Y + LG LH E VVHRD+ P NILL+ +CDF LA
Sbjct: 133 PQHIQYFM--YHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 340 TSA 342
+A
Sbjct: 184 DTA 186
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 224 KAFCRELMIASSLHHPNIVPLVGFCIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVR 279
K RE+ + + HHPNI+ L + E+ L+L+ + + L + +H+++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVIS 132
Query: 280 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
+ Y + LG LH E VVHRD+ P NILL+ +CDF LA
Sbjct: 133 PQHIQYFM--YHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 340 TSA 342
+A
Sbjct: 184 DTA 186
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 14/172 (8%)
Query: 176 EILAATHNFSKGRVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSKAFCREL 230
++L F+ GR+LG+G V + ++ ++ +V + + D + F RE
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 231 MIASSLHHPNIVPLVGFCIDPEQG-----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
HP++ LVG + +I ++ G L L + G LP
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG-ENPFNLP 135
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA + YL + R +HRD+ N +L+ + DFGL+
Sbjct: 136 LQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 235 SLHHPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 123
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + +LH C+VHRD+KP NIL++S KL DFGLA
Sbjct: 124 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 17/162 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGK------VGLLRTSVAIKRLDKEDKESSKAFCR-ELMIASS 235
NF +VLG GA VF + G L +K+ K + R E +
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
+ + + + E L LI Y++GG L HL ++++ ++V +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER----------FTEHEVQIY 164
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ E V L + + +++RDIK NILL S L DFGL+
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVGF 247
VLG GA + V + A+K ++K+ RE+ M+ H N++ L+ F
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+ ++ +L+++ + GGS+ H+H++ R + L SV V +A ++ +LHN
Sbjct: 80 FEEEDR-FYLVFEKMRGGSILSHIHKR----RHFNELEASV---VVQDVASALDFLHN-- 129
Query: 308 ERCVVHRDIKPSNILLS--SKKIP-KLCDFGLAT 338
+ + HRD+KP NIL ++ P K+CDFGL +
Sbjct: 130 -KGIAHRDLKPENILCEHPNQVSPVKICDFGLGS 162
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + ++ DFGLA TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Query: 186 KGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 245
+G +GRG V+K K + E S + CRE+ + L HPN++ L
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQ 84
Query: 246 G-FCIDPEQGLFLIYKYVSGGSLE-RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
F ++ ++L++ Y H K + LP + + I + + YL
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 304 HNGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLATWTSAPSVPF 347
H V+HRD+KP+NIL+ + K+ D G A ++P P
Sbjct: 145 HAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 211 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 269
A+K +DK ++ ++ E+++ HPNI+ L D + ++++ + GG L ++
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKD-VYDDGKYVYVVTELXKGGELLDK 106
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 325
L +K R S V I ++V YLH + VVHRD+KPSNIL +
Sbjct: 107 ILRQKFFSEREASA--------VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 326 KKIPKLCDFGLA 337
+ ++CDFG A
Sbjct: 156 PESIRICDFGFA 167
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 19/142 (13%)
Query: 190 LGRGALSFVFKG---KVG----LLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
LG+G + +FKG +VG L T V +K LDK + S++F + S L H ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G C ++ + L+ ++V GSL+ +L + K + + W L +A+ +A+
Sbjct: 76 LNYGVCFCGDENI-LVQEFVKFGSLDTYLKKNKNCI----NILWK------LEVAKQLAW 124
Query: 303 -LHNGTERCVVHRDIKPSNILL 323
+H E ++H ++ NILL
Sbjct: 125 AMHFLEENTLIHGNVCAKNILL 146
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 240
F LG GA S V + A+K + K+ KESS E+ + + H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHEN 81
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
IV L P L+L+ + VSGG L + EK G +R + ++V
Sbjct: 82 IVALEDIYESPNH-LYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIR-----QVLDAV 133
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSK----KIPKLCDFGLA 337
YLH +VHRD+KP N+L S+ KI + DFGL+
Sbjct: 134 YYLHR---MGIVHRDLKPENLLYYSQDEESKI-MISDFGLS 170
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 176 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
E+ ATH LGRG+ V + + A+K++ E + ELM +
Sbjct: 72 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 122
Query: 236 LHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
L P IVPL G + P +F+ + + GGSL + + E+ LP R L
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQ-------GCLP-EDRALYYL 172
Query: 295 GIA-ESVAYLHNGTERCVVHRDIKPSNILLSSKKI-PKLCDFGLAT 338
G A E + YLH+ R ++H D+K N+LLSS LCDFG A
Sbjct: 173 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAV 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 243
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 244 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 83 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 132
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
LH+ V+HR+IK NILL KL DFG
Sbjct: 133 LHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGF 163
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 209 SVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLE 268
VA+K +D ++ + E++I H N+V + + E+ L+++ +++ GG+L
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE-LWVLMEFLQGGALT 130
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
+ + + +T V + +++AYLH + V+HRDIK +ILL+
Sbjct: 131 DIVSQVRLNEEQIAT--------VCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGR 179
Query: 329 PKLCDFGLATWTS 341
KL DFG S
Sbjct: 180 VKLSDFGFCAQIS 192
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 87/223 (39%), Gaps = 66/223 (29%)
Query: 180 ATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESS--KAFCRELMI 232
A G+ LGRGA V + ++ S VA+K L KE +S KA EL I
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML-KEGATASEYKALMTELKI 83
Query: 233 ASSL-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER-----------------HLHEK 274
+ + HH N+V L+G C L +I +Y G+L H+ K
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPK 143
Query: 275 KKGV-----RGNSTLPWSVR----------------------------YKVALGIAESVA 301
K+ + +G SV YK + + + ++
Sbjct: 144 KEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLIS 203
Query: 302 Y---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
Y + G E R +HRD+ NILLS + K+CDFGLA
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA 246
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 176 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
E+ ATH LGRG+ V + + A+K++ E + ELM +
Sbjct: 91 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 141
Query: 236 LHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
L P IVPL G + P +F+ + + GGSL + + E+ LP R L
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQ-------GCLP-EDRALYYL 191
Query: 295 GIA-ESVAYLHNGTERCVVHRDIKPSNILLSSKKI-PKLCDFGLAT 338
G A E + YLH+ R ++H D+K N+LLSS LCDFG A
Sbjct: 192 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAV 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 243
+V+G G V G + G VAIK L E + F E I HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + + +I +++ GSL+ L + G T+ V + GIA + YL
Sbjct: 73 LEG-VVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLV--GMLRGIAAGMKYL 125
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW----TSAPS 344
+ VHR + NIL++S + K+ DFGL+ + TS P+
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 175
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 176 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVG 246
++G G+ V + L + VAIK++ + ED K RE+ I + L+H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 247 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW----SVRYKVALGIAESVAY 302
I + F V LE + KK R L ++ Y + +G V Y
Sbjct: 120 IVIPKDVEKFDELYVV----LEIADSDFKKLFRTPVYLTELHIKTLLYNLLVG----VKY 171
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 343
+H+ ++HRD+KP+N L++ K+CDFGLA P
Sbjct: 172 VHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 233
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 234 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ G+ Y+H+ V+HRD+KPSN+LL++ K+ DFGLA
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLA 171
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 169
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 170 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V + + A K + + + +E+ S L HP +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AF 117
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + +IY+++SGG L + ++ + + + + + + + + ++H E
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH---EN 168
Query: 310 CVVHRDIKPSNILLSSKKIP--KLCDFGLA 337
VH D+KP NI+ ++K+ KL DFGL
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + ++ DFG A TW + +L
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA 206
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 207 PEIILSKGYN 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG GA V + + A K + + + +E+ S L HP +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AF 223
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
+ + + +IY+++SGG L + ++ + + + + + + + + ++H E
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH---EN 274
Query: 310 CVVHRDIKPSNILLSSKKIP--KLCDFGLA 337
VH D+KP NI+ ++K+ KL DFGL
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T+
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQD-----RGDQAFTEREASEIXKS 169
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 170 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 188 RVLGRGALS---FVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNIVP 243
R LG GA V + GL R IK ++K+ + + E+ + SL HPNI+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERV---IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
+ D ++++ + GG L ER + + +G L ++ + ++AY
Sbjct: 85 IFEVFED-YHNMYIVMETCEGGELLERIVSAQARG----KALSEGYVAELMKQMMNALAY 139
Query: 303 LHNGTERCVVHRDIKPSNILL--SSKKIP-KLCDFGLA 337
H+ + VVH+D+KP NIL +S P K+ DFGLA
Sbjct: 140 FHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I + LHHP ++ L + + + LI +++SGG L + + + + +
Sbjct: 98 EISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP--KLCDFGLAT 338
+ E + ++H E +VH DIKP NI+ +KK K+ DFGLAT
Sbjct: 157 Q------ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 123
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 124 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 124
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 125 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 171
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 130
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 131 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 177
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 139
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 140 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 186
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 131
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 132 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 178
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 129
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 130 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 176
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 239 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 123
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSA 342
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T++
Sbjct: 124 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P + L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P + L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 259
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 260 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 301
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 242
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 243 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE---S 299
G + + L++I +Y+ GGS L P+ +++A + E
Sbjct: 85 KYYGSYLKGSK-LWIIMEYLGGGSALDLLRAG----------PFD-EFQIATMLKEILKG 132
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ YLH+ + +HRDIK +N+LLS + KL DFG+A
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 241
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 242 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 292
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 130
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y+H ++HRD+K +N+L++ + KL DFGLA
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 32/172 (18%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV--------AIKRLDK-----EDKESSKA 225
A +F +VLG+G+ GKV L+R A+K L K D+ +K
Sbjct: 25 ADPSHFELLKVLGQGSF-----GKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM 79
Query: 226 FCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
E I + ++HP +V L + E L+LI ++ GG L L ++ +
Sbjct: 80 ---ERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED---- 131
Query: 286 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
V++ +A +A + +LH+ +++RD+KP NILL + KL DFGL+
Sbjct: 132 --VKFYLA-ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 241
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 242 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 292
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 130
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y+H ++HRD+K +N+L++ + KL DFGLA
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 82 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 141 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGM 184
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 190 LGRGALSFV-----------FKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+G+GA S V + K+ + K+L D + + RE I L H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKI------INTKKLSARDHQKLE---REARICRLLKH 62
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
NIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 63 SNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILE 114
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLA 337
+V + H + VVHRD+KP N+LL+SK KL DFGLA
Sbjct: 115 AVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 34/180 (18%)
Query: 178 LAATHNFSKG------------RVLGRGALSFVF---KGKVGLLRTSVAIKRLDK----- 217
+A TH+ +G +VLG+G+ VF K R A+K L K
Sbjct: 8 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 67
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKG 277
D+ +K E I ++HP IV L + E L+LI ++ GG L L ++
Sbjct: 68 RDRVRTKM---ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 278 VRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ V++ +A +A ++ +LH+ +++RD+KP NILL + KL DFGL+
Sbjct: 124 TEED------VKFYLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 72 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 131 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGM 174
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 245
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 246 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 34/180 (18%)
Query: 178 LAATHNFSKG------------RVLGRGALSFVF---KGKVGLLRTSVAIKRLDK----- 217
+A TH+ +G +VLG+G+ VF K R A+K L K
Sbjct: 8 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 67
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKG 277
D+ +K E I ++HP IV L + E L+LI ++ GG L L ++
Sbjct: 68 RDRVRTKM---ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 278 VRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ V++ +A +A ++ +LH+ +++RD+KP NILL + KL DFGL+
Sbjct: 124 TEED------VKFYLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 57/214 (26%)
Query: 179 AATHNFSKGRVLGRGALSFV---FKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
++ +S G+ LG G+ V F + G A+K++ ++ + + REL I
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESG---KRFALKKVLQDPRYKN----RELDIMKV 56
Query: 236 LHHPNIVPLVGF-----------------------------------CIDPEQGLFL--I 258
L H NI+ LV + ++P Q +L I
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 259 YKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKP 318
+YV +L + L K +R ++P ++ + +V ++H+ + HRDIKP
Sbjct: 117 MEYVPD-TLHKVL---KSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKP 169
Query: 319 SNILLSSK-KIPKLCDFGLAT--WTSAPSVPFLC 349
N+L++SK KLCDFG A S PSV +C
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXIC 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 34/180 (18%)
Query: 178 LAATHNFSKG------------RVLGRGALSFVF---KGKVGLLRTSVAIKRLDK----- 217
+A TH+ +G +VLG+G+ VF K R A+K L K
Sbjct: 9 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 68
Query: 218 EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKG 277
D+ +K R++++ ++HP IV L + E L+LI ++ GG L L ++
Sbjct: 69 RDRVRTK-MERDILV--EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 124
Query: 278 VRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ V++ +A +A ++ +LH+ +++RD+KP NILL + KL DFGL+
Sbjct: 125 TEED------VKFYLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 119
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 120 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 72 DDDEKSKGSNLEHNKAWLLAESGGAELTSTDPQSVHSSFRFSLCSQVELESMNIGASASA 131
DD K+ G NL N G +L P+ + ++ C+Q
Sbjct: 95 DDKRKACGRNLTQN----FLSHTGPDLIPEVPRQLVTN-----CTQ-------------- 131
Query: 132 TVLMVNLENGLCDSRAQELKWRKIQSLERSISPVANSLIRLSYGEIL---------AATH 182
LE G C QEL + L S++P A+ L + + L +
Sbjct: 132 -----RLEQGPCKDLFQELTRLTHEYL--SVAPFADYLDSIYFNRFLQWKWLERQPVTKN 184
Query: 183 NFSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHP 239
F + RVLG+G V +V G + +++ + ++ E I ++
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 299
+V L + + + L L+ ++GG L+ H++ G + P + A I
Sbjct: 245 FVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHM-----GQAGFPEARAVFYAAEICCG 298
Query: 300 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 357
+ LH ER +V+RD+KP NILL ++ D GLA +T+KG G
Sbjct: 299 LEDLHR--ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPE------GQTIKGRVG 347
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 241
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 242 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 292
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 129
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y+H ++HRD+K +N+L++ + KL DFGLA
Sbjct: 130 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 184 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 240
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+LH +R +++RD+KP N+LL ++ D GLA
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 73 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 132 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 176
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 82 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 141 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 29/232 (12%)
Query: 138 LENGLCDSRAQELKWRKIQSLERSISPVANSLIRLSYGEIL---------AATHNFSKGR 188
LE G C QEL + L S++P A+ L + + L + F + R
Sbjct: 133 LEQGPCKDLFQELTRLTHEYL--SVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYR 190
Query: 189 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 245
VLG+G V +V G + +++ + ++ E I ++ +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL- 249
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
+ + + L L+ ++GG L+ H++ G + P + A I + LH
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHM-----GQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 357
ER +V+RD+KP NILL ++ D GLA +T+KG G
Sbjct: 305 --ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPE------GQTIKGRVG 347
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 76 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 135 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 75 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 134 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 184 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 240
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+LH +R +++RD+KP N+LL ++ D GLA
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 20/190 (10%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 235
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 236 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
++ P + L F L+++ +Y GG + HL G P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 150
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 349
I + YLH+ +++RD+KP N+++ + K+ DFG A TW + +L
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 350 KTVKGTFGQN 359
+ + G N
Sbjct: 208 PEIILSKGYN 217
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 76 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 135 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 184 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 241
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 242 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
V L+ C P + ++L++ + E L V TL S +V
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTL--SEIKRVMQ 132
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + Y+H ++HRD+K +N+L++ + KL DFGLA
Sbjct: 133 MLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
NF K +G G+ V V VA+K++D ++ + E++I H N+V
Sbjct: 28 NFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 84
Query: 243 PLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ + + E L+++ +++ GG+L + ++ + V L + ++++
Sbjct: 85 EMYNSYLVGDE--LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVLQALS 134
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 135 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 171
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 75 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 134 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 126
Query: 289 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFG 335
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG
Sbjct: 127 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 184 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 240
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+LH +R +++RD+KP N+LL ++ D GLA
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 69 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 172
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 184 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 240
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+LH +R +++RD+KP N+LL ++ D GLA
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
NF K +G G+ V V VA+K++D ++ + E++I H N+V
Sbjct: 24 NFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 80
Query: 243 PLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ + + E L+++ +++ GG+L + + + V L + ++++
Sbjct: 81 EMYNSYLVGDE--LWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALS 130
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 131 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVGF 247
VLG GA + V + A+K ++K+ RE+ M+ H N++ L+ F
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 248 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 307
+ ++ +L+++ + GGS+ H+H++ R + L SV V +A ++ +LHN
Sbjct: 80 FEEEDR-FYLVFEKMRGGSILSHIHKR----RHFNELEASV---VVQDVASALDFLHN-- 129
Query: 308 ERCVVHRDIKPSNILLS--SKKIP-KLCDFGLAT 338
+ + HRD+KP NIL ++ P K+CDF L +
Sbjct: 130 -KGIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 67 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 126 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 170
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
NF K +G G+ V V VA+K++D ++ + E++I H N+V
Sbjct: 35 NFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 91
Query: 243 PLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ + + E L+++ +++ GG+L + + + V L + ++++
Sbjct: 92 EMYNSYLVGDE--LWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALS 141
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 142 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 104 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 163 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 207
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
NF K +G G+ V V VA+K++D ++ + E++I H N+V
Sbjct: 33 NFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 89
Query: 243 PLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ + + E L+++ +++ GG+L + + + V L + ++++
Sbjct: 90 EMYNSYLVGDE--LWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALS 139
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 140 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
+ + IAE+V +LH+ + ++HRD+KPSNI + + K+ DFGL T
Sbjct: 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 212
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 241
+F + +GRG VF+ K + + AIKR+ ++E + + RE+ + L HP I
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 242 V 242
V
Sbjct: 67 V 67
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 255 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 314
L +I + + GG L + E RG+ ++ I ++ +LH+ + HR
Sbjct: 82 LLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHR 133
Query: 315 DIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKT 351
D+KP N+L +SK+ + KL DFG A T+ ++ C T
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 255 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 314
L +I + + GG L + E RG+ ++ I ++ +LH+ + HR
Sbjct: 101 LLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHR 152
Query: 315 DIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKT 351
D+KP N+L +SK+ + KL DFG A T+ ++ C T
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 228 RELMIASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
RE A L P++VP+ F ID + L++ + ++G L L + G P
Sbjct: 83 REARTAGRLQEPHVVPIHDFGEIDGQ--LYVDXRLINGVDLAAXLRRQ-----GPLAPPR 135
Query: 287 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 346
+V +G A A+ T HRD+KP NIL+S+ L DFG+A+ T+ +
Sbjct: 136 AVAIVRQIGSALDAAHAAGAT-----HRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190
Query: 347 FLCKTVKGTFGQNP 360
L TV + P
Sbjct: 191 QLGNTVGTLYYXAP 204
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLHHPNIVPLVGF 247
+LG+GA + VF+G+ AIK + RE + L+H NIV L F
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 248 CIDPEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
I+ E LI ++ GSL L E LP S + + + + V ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY----GLPES---EFLIVLRDVVGGMN 126
Query: 305 NGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLA 337
+ E +VHR+IKP NI+ + + KL DFG A
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLHHPNIVPLVGF 247
+LG+GA + VF+G+ AIK + RE + L+H NIV L F
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 248 CIDPEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
I+ E LI ++ GSL L E LP S + + + + V ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY----GLPES---EFLIVLRDVVGGMN 126
Query: 305 NGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLA 337
+ E +VHR+IKP NI+ + + KL DFG A
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVP 243
+++G G V G++ G VAIK L E + F E I HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + ++ +Y+ GSL+ L G T+ V + G+ + YL
Sbjct: 115 LEGVVTRGRLAM-IVTEYMENGSLDTFLRTHD----GQFTIMQLV--GMLRGVGAGMRYL 167
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ VHRD+ N+L+ S + K+ DFGL+
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 188 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVP 243
+++G G V G++ G VAIK L E + F E I HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L G + ++ +Y+ GSL+ L G T+ V + G+ + YL
Sbjct: 115 LEGVVTRGRLAM-IVTEYMENGSLDTFLRTHD----GQFTIMQLV--GMLRGVGAGMRYL 167
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
++ VHRD+ N+L+ S + K+ DFGL+
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 242
NF K +G G+ V V VA+K++D ++ + E++I H N+V
Sbjct: 78 NFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 134
Query: 243 PLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
+ + + E L+++ +++ GG+L + ++ + V L + ++++
Sbjct: 135 EMYNSYLVGDE--LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVLQALS 184
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 185 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 281 NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ +P + K+ L +++ +L + ++HRDIKPSNILL KLCDFG++
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 175 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 234
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 147 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 203
Query: 235 SLHHPNIVPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 293
H N+V + + + E L+++ +++ GG+L + ++ + V
Sbjct: 204 DYQHENVVEMYNSYLVGDE--LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVC 253
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
L + ++++ LH + V+HRDIK +ILL+ KL DFG S
Sbjct: 254 LAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 241
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIAE 298
+ + P+ Y+ ++ LH R ST S ++Y + +
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH------RVISTQMLSDDHIQYFIYQTL-R 123
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V LH V+HRD+KPSN+L++S K+CDFGLA
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 2 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 56
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 109
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 110 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 241
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIAE 298
+ + P+ Y+ ++ LH R ST S ++Y + +
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH------RVISTQMLSDDHIQYFIYQTL-R 123
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V LH V+HRD+KPSN+L++S K+CDFGLA
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 241
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIAE 298
+ + P+ Y+ ++ LH R ST S ++Y + +
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH------RVISTQMLSDDHIQYFIYQTL-R 123
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+V LH V+HRD+KPSN+L++S K+CDFGLA
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 233
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 8 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 234 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 293
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 63 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 114
Query: 294 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 115 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 154
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 7 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 62 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 114
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 115 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 156
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 183 NFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 238
+F+ VLG+G+ V KG L + K + +D + + ++A
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
P + L C L+ + +YV+GG L H+ + G P +V Y A IA
Sbjct: 81 PFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFY--AAEIAI 132
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ +L + + +++RD+K N++L S+ K+ DFG+
Sbjct: 133 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 2 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 56
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 109
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 110 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 232
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 291
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 69 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 292 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ + IA+ +AYL+ VHRD+ N ++ K+ DFG+
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMT 172
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 2 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 56
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 109
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 110 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 2 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 56
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 109
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 110 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
VA+K +++ +K ++ RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEKIAANV-KREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 329
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 330 --KLCDFGLATWTSAPSVPFLCKTVKGT 355
K+CDFG + + S P K+ GT
Sbjct: 155 RLKICDFGYSKSSVLHSQP---KSTVGT 179
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCREL 230
++F ++LG+G GKV L+R A+K L KE K+ E
Sbjct: 2 VTMNDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 56
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF------ 109
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH+ R VV+RDIK N++L K+ DFGL
Sbjct: 110 -YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 186 KGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 245
K + LG G+ S K + A+K + K + +++ L + HPNIV L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLH 72
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
D + FL+ + ++GG L + +KK ++ + + +V+++H+
Sbjct: 73 EVFHD-QLHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMRKLVSAVSHMHD 124
Query: 306 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPF 347
VVHRD+KP N+L + + K+ DFG A + P
Sbjct: 125 VG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 189 VLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 244
VLG+G+ V KG L + K + +D + + ++A P + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 245 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
C L+ + +YV+GG L H+ + G P +V Y A IA + +L
Sbjct: 408 HS-CFQTMDRLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFY--AAEIAIGLFFLQ 459
Query: 305 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
+ + +++RD+K N++L S+ K+ DFG+
Sbjct: 460 S---KGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 46 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 103
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 329
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 104 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 153
Query: 330 --KLCDFGLATWTSAPSVPFLCKTVKGT 355
K+CDFG + + S P K+ GT
Sbjct: 154 RLKICDFGYSKSSVLHSQP---KSTVGT 178
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 144
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 144
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 75 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 124
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 125 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 73 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 122
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 123 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 248
LGRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 133
Query: 249 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 306
+ P +F+ + + GGSL + + + LP R LG A E + YLH
Sbjct: 134 REGPWVNIFM--ELLEGGSLGQLIKQM-------GCLP-EDRALYYLGQALEGLEYLHT- 182
Query: 307 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLA 337
R ++H D+K N+LLSS LCDFG A
Sbjct: 183 --RRILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNI 241
++F K +G G + L + VA+K +++ + RE++ SL HPNI
Sbjct: 22 YDFVKD--IGSGNFGVARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRSLRHPNI 78
Query: 242 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 301
V + P L +I +Y SGG L + + + + + V+
Sbjct: 79 VRFKEVILTPTH-LAIIMEYASGGELYERICNAGRFSEDEARFFFQ-------QLLSGVS 130
Query: 302 YLHNGTERCVVHRDIKPSNILLSSKKIP--KLCDFGLATWTSAPSVPFLCKTVKGT 355
Y H+ + HRD+K N LL P K+CDFG + + S P K+ GT
Sbjct: 131 YCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGT 180
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 128
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 85 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 134
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 128
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 93 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 142
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 143 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 11/155 (7%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 240
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
+ + + + L+L+ Y GG L L + + + + +A+ +SV
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI---DSV 191
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
LH VHRDIKP NIL+ +L DFG
Sbjct: 192 HQLH------YVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 243
V+G+G S V + A+K +D SS RE I L HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 91 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 304 HNGTERCVVHRDIKPSNILLSSKK--IP-KLCDFGLA 337
H+ ++HRD+KP +LL+SK+ P KL FG+A
Sbjct: 147 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 249
LG G+ V+K VAIK++ E + +E+ I P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 250 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 309
L+++ +Y GS+ + + N TL + + + YLH +
Sbjct: 95 K-NTDLWIVMEYCGAGSVSDIIRLR------NKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 310 CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+HRDIK NILL+++ KL DFG+A
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 169 LIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF 226
++RL E+ +F +V+GRGA S V K+ A+K ++K D K +
Sbjct: 50 VVRLK--EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 227 CRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 286
RE + + F E L+L+ +Y GG L L K G R + +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAEM-- 163
Query: 287 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
R+ +AE V + + VHRDIKP NILL +L DFG
Sbjct: 164 -ARFY----LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 25/213 (11%)
Query: 132 TVLMVNLENGLCDSRAQELKWRKIQSLERSISPVANS-----LIRLSYGEILAATHNFSK 186
T + + +GL A E+ +R S SP NS + L+ + + F
Sbjct: 100 TTAIQTVADGLKKQAAAEMDFR-------SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEY 152
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
++LG+G V K A+K L KE K+ E + + HP +
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L + L + +Y +GG L HL ++ + I ++ YL
Sbjct: 213 L-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYL 264
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
H +E+ VV+RD+K N++L K+ DFGL
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 243
V+G+G S V + A+K +D SS RE I L HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 93 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 304 HNGTERCVVHRDIKPSNILLSSKK--IP-KLCDFGLA 337
H+ ++HRD+KP +LL+SK+ P KL FG+A
Sbjct: 149 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 78
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 79 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 25/213 (11%)
Query: 132 TVLMVNLENGLCDSRAQELKWRKIQSLERSISPVANS-----LIRLSYGEILAATHNFSK 186
T + + +GL +E+ +R S SP NS + L+ + + F
Sbjct: 103 TTAIQTVADGLKKQEEEEMDFR-------SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEY 155
Query: 187 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 243
++LG+G V K A+K L KE K+ E + + HP +
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 244 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
L + L + +Y +GG L HL ++ + I ++ YL
Sbjct: 216 L-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYL 267
Query: 304 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
H +E+ VV+RD+K N++L K+ DFGL
Sbjct: 268 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 210 VAIKRLDKEDKESSKAFCR-ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLE 268
VAIK +DK S + E+ +L H +I L ++ +F++ +Y GG L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELF 96
Query: 269 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 328
++ + + + + V I +VAY+H+ + HRD+KP N+L
Sbjct: 97 DYIISQDRLSEEETRV-------VFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHK 146
Query: 329 PKLCDFGL 336
KL DFGL
Sbjct: 147 LKLIDFGL 154
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 11/155 (7%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 240
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
+ + + E L+L+ Y GG L L + LP + I E V
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLS------KFEDKLPEDM---ARFYIGEMV 201
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
+ + + VHRDIKP N+LL +L DFG
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 80
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 81 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHRD+ N +++ K+ DFG+
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 210 VAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
VAIK+L + + + +K REL++ + H N++ L+ P L Y +
Sbjct: 52 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPF 110
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ +K G++ + + Y++ G+ Y+H+ VVHRD+KP N+ ++
Sbjct: 111 MQTDLQKIMGLKFSEEKIQYLVYQMLKGLK----YIHSA---GVVHRDLKPGNLAVNEDC 163
Query: 328 IPKLCDFGLATWTSA 342
K+ DFGLA A
Sbjct: 164 ELKILDFGLARHADA 178
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 11/155 (7%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 240
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 241 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
+ + + E L+L+ Y GG L L + LP + I E V
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLS------KFEDKLPEDM---ARFYIGEMV 185
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
+ + + VHRDIKP N+LL +L DFG
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 437 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 486
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 487 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 245
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 246 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 438 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 487
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
E VHRD+ N+LL ++ K+ DFGL+
Sbjct: 488 --ESNFVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 248
+GRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 119
Query: 249 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 306
+ P +F+ + + GGSL + + + LP R LG A E + YLH
Sbjct: 120 REGPWVNIFM--ELLEGGSLGQLIKQM-------GCLP-EDRALYYLGQALEGLEYLHT- 168
Query: 307 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLA 337
R ++H D+K N+LLSS LCDFG A
Sbjct: 169 --RRILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 228 RELMIASSLHHPNIVPLVGFCIDPE-QGLFLIYKYVSGGSLER--HLHEKKKGVRGNSTL 284
+E+ + L H N++ LV + E Q ++++ +Y G E + EK+
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--------F 106
Query: 285 PWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 344
P + + + + YLH+ + +VH+DIKP N+LL++ K+ G+A +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 345 VPFLCKTVKGTFGQNP 360
C+T +G+ P
Sbjct: 164 ADDTCRTSQGSPAFQP 179
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 248
+GRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 135
Query: 249 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 306
+ P +F+ + + GGSL + ++ LP R LG A E + YLH
Sbjct: 136 REGPWVNIFM--ELLEGGSLGQL-------IKQMGCLP-EDRALYYLGQALEGLEYLHT- 184
Query: 307 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLA 337
R ++H D+K N+LLSS LCDFG A
Sbjct: 185 --RRILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 42/161 (26%)
Query: 212 IKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL 271
I++++ +D E K E+ + LHHPNI L D EQ + L+ + GG L L
Sbjct: 64 IRQINPKDVERIKT---EVRLMKKLHHPNIARLYEVYED-EQYICLVMELCHGGHLLDKL 119
Query: 272 HE------------------------KKKGVRGN-----STLPWSVRYKVALGIAESV-- 300
+ ++ + G+ +L + R K+ I +
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179
Query: 301 --AYLHNGTERCVVHRDIKPSNILLSSKKI--PKLCDFGLA 337
YLHN + + HRDIKP N L S+ K KL DFGL+
Sbjct: 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 31/171 (18%)
Query: 177 ILAATHNFSKGRVLGRGAL-SFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCREL 230
++ +F VLG GA + V++G VA+KR+ E D+E
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFD--NRDVAVKRILPECFSFADREVQ------- 69
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
++ S HPN++ FC + ++ I + +L+ ++ +K G P ++
Sbjct: 70 LLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE--PITLLQ 125
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLS-----SKKIPKLCDFGL 336
+ G+A +LH+ +VHRD+KP NIL+S K + DFGL
Sbjct: 126 QTTSGLA----HLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIV----- 242
+G GA V + L VAIK++ + ++K REL I H NI+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 243 --PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIA 297
P V + G F YV +E LH+ +S+ P + VRY + +
Sbjct: 123 LRPTVPY------GEFKSV-YVVLDLMESDLHQII-----HSSQPLTLEHVRYFL-YQLL 169
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y+H+ V+HRD+KPSN+L++ K+ DFG+A
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIV----- 242
+G GA V + L VAIK++ + ++K REL I H NI+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 243 --PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIA 297
P V + G F YV +E LH+ +S+ P + VRY + +
Sbjct: 122 LRPTVPY------GEFKSV-YVVLDLMESDLHQII-----HSSQPLTLEHVRYFL-YQLL 168
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
+ Y+H+ V+HRD+KPSN+L++ K+ DFG+A
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 210 VAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 267
VAIK+L + + + +K REL++ + H N++ L+ P L Y +
Sbjct: 70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPF 128
Query: 268 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 327
+ +K G+ + + Y++ G+ Y+H+ VVHRD+KP N+ ++
Sbjct: 129 MQTDLQKIMGMEFSEEKIQYLVYQMLKGLK----YIHSA---GVVHRDLKPGNLAVNEDC 181
Query: 328 IPKLCDFGLATWTSA 342
K+ DFGLA A
Sbjct: 182 ELKILDFGLARHADA 196
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 12 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 65
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 117
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 157
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTD 176
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 245
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 246 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKSQALSDEHVQFLV-YQLLRGL 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA
Sbjct: 145 KYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 14 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 67
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 119
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 159
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 37 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 90
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 142
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 11 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 64
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 116
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 17 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 70
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 122
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 162
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 189 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI--ASSLHHPNIVP-LV 245
++GRG V+KG L VA+K ++++ F E I + H NI +V
Sbjct: 20 LIGRGRYGAVYKG--SLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 246 G---FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
G D L+ +Y GSL ++L T W ++A + +AY
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL--------SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 303 LHNGTER------CVVHRDIKPSNILLSSKKIPKLCDFGLA 337
LH R + HRD+ N+L+ + + DFGL+
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 21/104 (20%)
Query: 238 HPNIVPLVGFCI------DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
HP+IV + F DP +++ +YV G SL+R +K LP +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVG--YIVMEYVGGQSLKRSKGQK---------LPVAEAIA 186
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 335
L I +++YLH+ +V+ D+KP NI+L+ +++ KL D G
Sbjct: 187 YLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQL-KLIDLG 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA----FCRELMIASSLHHPNIVPLV 245
+GRG+ V+KG T+V + + +D++ +K+ F E L HPNIV
Sbjct: 34 IGRGSFKTVYKGLD--TETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 246 GF---CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
+ ++ + L+ + + G+L+ +L ++ K + W + I + + +
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQ------ILKGLQF 144
Query: 303 LHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWTSAPSVPFLCKTVKGT 355
LH T ++HRD+K NI ++ K+ D GLAT A K V GT
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGT 193
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 50 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 103
Query: 248 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 303
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 155
Query: 304 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
H GT+ + HRD+K NIL+ + D GLA
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 329
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAP 154
Query: 330 --KLCDFGLATWTSAPSVPFLCKTVKGT 355
K+ DFG + + S P K+ GT
Sbjct: 155 RLKIADFGYSKASVLHSQP---KSAVGT 179
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 82
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 83 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHR++ N +++ K+ DFG+
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMT 178
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 247
+G GA V G VAIK+L + + + +K REL + + H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 248 -----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 302
+D +L+ ++ + HEK G + + V Y++ G+ Y
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLV-YQMLKGLR----Y 143
Query: 303 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-------------TWTSAPSV 345
+H ++HRD+KP N+ ++ K+ DFGLA W AP V
Sbjct: 144 IHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEV 196
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 188 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 239
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 240 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 296
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 297 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
A+ +AYL+ + VHR++ N +++ K+ DFG+
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMT 177
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH-PNI 241
++ R LGRG S VF+ V +K L K K RE+ I +L PNI
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK---REIKILENLRGGPNI 94
Query: 242 VPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
+ L DP + L++++V+ + L++ + + +R+ + I +++
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF-KQLYQ--------TLTDYDIRFYM-YEILKAL 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSK-KIPKLCDFGLATW 339
Y H+ ++HRD+KP N+++ + + +L D+GLA +
Sbjct: 145 DYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 26 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 85 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 135
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 356 FGQNP 360
P
Sbjct: 192 VNYMP 196
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 14/166 (8%)
Query: 175 GEILAATHN-FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCREL 230
G + T N F ++LG+G V K A+K L KE K+ E
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 61 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF------ 113
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
I ++ YLH +E+ VV+RD+K N++L K+ DFGL
Sbjct: 114 -YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 329
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 330 --KLCDFGLATWTSAPSVPFLCKTVKGT 355
K+C FG + + S P K+ GT
Sbjct: 155 RLKICAFGYSKSSVLHSQP---KSTVGT 179
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 245
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 246 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKCQALSDEHVQFLV-YQLLRGL 144
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA
Sbjct: 145 KYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 7 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 66 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 116
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 117 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 356 FGQNP 360
P
Sbjct: 173 VNYMP 177
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 150 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTD 182
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 356 FGQNP 360
P
Sbjct: 220 VNYMP 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 146 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTD 178
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---------DKESSKAFCRELM 231
+ +S LG GA FV+ V +K + KE D + K E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV-TLEIA 81
Query: 232 IASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 291
I S + H NI+ ++ I QG F + G L+ + + R
Sbjct: 82 ILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 292 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 339
V+ +V YL + ++HRDIK NI+++ KL DFG A +
Sbjct: 140 VS-----AVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 356 FGQNP 360
P
Sbjct: 220 VNYMP 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 230
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 11 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 65
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 66 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 116
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ +
Sbjct: 117 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 164
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHH 238
+ F ++LG+G V K A+K L KE K+ E + + H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
P + L + L + +Y +GG L HL ++ + I
Sbjct: 70 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVS 121
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH +E+ VV+RD+K N++L K+ DFGL
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 47 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 102
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 103 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 154
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 155 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTD 187
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 182 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHH 238
+ F ++LG+G V K A+K L KE K+ E + + H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 239 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 298
P + L + L + +Y +GG L HL ++ + I
Sbjct: 68 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVS 119
Query: 299 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++ YLH +E+ VV+RD+K N++L K+ DFGL
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 182 HNFSKG------RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 235
H F G + LG G VF VAIK++ D +S K RE+ I
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 236 LHHPNIVPLV------GFCIDPEQG-------LFLIYKYVSGGSLERHLHEKKKGVRGNS 282
L H NIV + G + + G ++++ +Y+ ++ E+ + ++
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL--ANVLEQGPLLEEHA 122
Query: 283 TLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLA 337
L Y++ G+ Y+H+ V+HRD+KP+N+ ++++ + K+ DFGLA
Sbjct: 123 RL---FMYQLLRGLK----YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 230
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 10 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 64
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 65 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 115
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ +
Sbjct: 116 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 210 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 269
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 270 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 329
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 330 --KLCDFGLATWTSAPSVP 346
K+C FG + + S P
Sbjct: 155 RLKICAFGYSKSSVLHSQP 173
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 230
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 1 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 55
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 56 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 106
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ +
Sbjct: 107 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 154
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 10 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 68
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 69 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 119
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 120 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 356 FGQNP 360
P
Sbjct: 176 VNYMP 180
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L K + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 230
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 5 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 59
Query: 231 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 290
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 60 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 110
Query: 291 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ +
Sbjct: 111 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 158
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 6 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 64
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 65 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 115
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 116 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 356 FGQNP 360
P
Sbjct: 172 VNYMP 176
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 179 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--L 236
H + +G+G V++G +VA+K D+ K++ RE + ++ L
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVML 59
Query: 237 HHPNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 293
H NI+ + + L+LI Y GSL +L +TL ++
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIV 111
Query: 294 LGIAESVAYLH---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
L IA +A+LH GT+ + HRD+K NIL+ + D GLA
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 118
Query: 289 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 119 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 163
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T+
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 198 VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFL 257
VF GK+ + S+ +K +E E+ I SL H ++V GF D +F+
Sbjct: 44 VFAGKI--VPKSLLLKPHQRE------KMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 94
Query: 258 IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY--KVALGIAESVAYLHNGTERCVVHRD 315
+ + SL LH+++K + T P + Y ++ LG YLH V+HRD
Sbjct: 95 VLELCRRRSL-LELHKRRKAL----TEPEARYYLRQIVLG----CQYLHRNR---VIHRD 142
Query: 316 IKPSNILLSSKKIPKLCDFGLAT 338
+K N+ L+ K+ DFGLAT
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLAT 165
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGL 336
++HRD+KPSN+ ++ K+ DFGL
Sbjct: 144 AD---IIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 198 VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFL 257
VF GK+ + S+ +K +E E+ I SL H ++V GF D +F+
Sbjct: 48 VFAGKI--VPKSLLLKPHQRE------KMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 98
Query: 258 IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY--KVALGIAESVAYLHNGTERCVVHRD 315
+ + SL LH+++K + T P + Y ++ LG YLH V+HRD
Sbjct: 99 VLELCRRRSL-LELHKRRKAL----TEPEARYYLRQIVLG----CQYLHRNR---VIHRD 146
Query: 316 IKPSNILLSSKKIPKLCDFGLAT 338
+K N+ L+ K+ DFGLAT
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLAT 169
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 255 LFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVH 313
+ LI +Y +GG + L E + V N + ++ I E V YLH +VH
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVI------RLIKQILEGVYYLHQNN---IVH 154
Query: 314 RDIKPSNILLSSKKIP----KLCDFGLA 337
D+KP NILLSS P K+ DFG++
Sbjct: 155 LDLKPQNILLSS-IYPLGDIKIVDFGMS 181
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 26 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 85 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 135
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 356 FGQNP 360
P
Sbjct: 192 VNYMP 196
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T+
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 198 VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFL 257
VF GK+ + S+ +K +E E+ I SL H ++V GF D +F+
Sbjct: 44 VFAGKI--VPKSLLLKPHQRE------KMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 94
Query: 258 IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY--KVALGIAESVAYLHNGTERCVVHRD 315
+ + SL LH+++K + T P + Y ++ LG YLH V+HRD
Sbjct: 95 VLELCRRRSL-LELHKRRKAL----TEPEARYYLRQIVLG----CQYLHRNR---VIHRD 142
Query: 316 IKPSNILLSSKKIPKLCDFGLAT 338
+K N+ L+ K+ DFGLAT
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLAT 165
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 183 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCRELM-----I 232
+ G +LG+G VF G R VAIK + + S C + +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 233 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 292
+ HP ++ L+ + E + ++ + + L ++ EK G S +
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--------RC 143
Query: 293 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFG 335
G + VA + + R VVHRDIK NIL+ ++ KL DFG
Sbjct: 144 FFG--QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T+
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 229 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 288
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 142
Query: 289 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 143 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 187
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 59 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 114
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 115 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 166
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 198 VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFL 257
VF GK+ + S+ +K +E E+ I SL H ++V GF D +F+
Sbjct: 68 VFAGKI--VPKSLLLKPHQRE------KMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 118
Query: 258 IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY--KVALGIAESVAYLHNGTERCVVHRD 315
+ + SL LH+++K + T P + Y ++ LG YLH V+HRD
Sbjct: 119 VLELCRRRSL-LELHKRRKAL----TEPEARYYLRQIVLG----CQYLHRNR---VIHRD 166
Query: 316 IKPSNILLSSKKIPKLCDFGLAT 338
+K N+ L+ K+ DFGLAT
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLAT 189
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 35 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 90
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 91 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 142
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 143 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 175
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 188 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 245
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 246 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 300
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKCQALSDEHVQFLV-YQLLRGL 136
Query: 301 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA
Sbjct: 137 KYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 183
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 47 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 102
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 103 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 154
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 155 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 187
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 33 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 88
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 89 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 140
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++G +VA+K D+ K++ RE + ++ L H NI+ +
Sbjct: 45 VGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 99
Query: 248 CIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+ L+LI Y GSL +L +TL ++ L IA +A+LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIVLSIASGLAHLH 151
Query: 305 ---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLA 337
GT+ + HRD+K NIL+ + D GLA
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 59 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 114
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 115 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 166
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++G +VA+K D+ K++ RE + ++ L H NI+ +
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 248 CIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+ L+LI Y GSL +L +TL ++ L IA +A+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIVLSIASGLAHLH 122
Query: 305 ---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
GT+ + HRD+K NIL+ + D GLA
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 33 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 88
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 89 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 140
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 55 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 110
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 111 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 162
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 34 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 89
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 90 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 141
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 142 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 174
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 186 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 236
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 237 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 295
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 355
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + G
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 356 FGQNP 360
P
Sbjct: 220 VNYMP 224
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 227 CRELMIASSLHHPNIVPLVGFCIDPEQG-LFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
C L I S HPN++P++G C P LI ++ GSL LHE V S
Sbjct: 58 CPRLRIFS---HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA- 113
Query: 286 WSVRYKVALGIAESVAYLH 304
K AL +A +A+LH
Sbjct: 114 ----VKFALDMARGMAFLH 128
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ D+GLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDYGLARHTD 176
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 252 EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCV 311
E G+ + + G SL++H ++LP + + ++A+LH+ + +
Sbjct: 128 EGGILYLQTELCGPSLQQHCEAW------GASLPEAQVWGYLRDTLLALAHLHS---QGL 178
Query: 312 VHRDIKPSNILLSSKKIPKLCDFGL 336
VH D+KP+NI L + KL DFGL
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 349
++HRD+KPSN+ ++ K+ DFGLA T F+
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 349
++HRD+KPSN+ ++ K+ DFGLA T F+
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 190 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 247
+G+G V++G SVA+K D++S + RE I ++ L H NI+ +
Sbjct: 16 VGKGRYGEVWRGL--WHGESVAVKIFSSRDEQS---WFRETEIYNTVLLRHDNILGFIAS 70
Query: 248 CI---DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 304
+ + L+LI Y GSL L + TL + ++A+ A +A+LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQ--------TLEPHLALRLAVSAACGLAHLH 122
Query: 305 N---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLAT 338
GT+ + HRD K N+L+ S + D GLA
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV 161
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 46 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 101
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 102 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 153
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 154 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCRELMIASS 235
T F + +G G VFK L AIKR K D++++ RE+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA---LREVYAHAV 64
Query: 236 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
L H ++V + + + + +Y +GGSL + E R S + + L
Sbjct: 65 LGQHSHVVRYFSAWAEDDH-MLIQNEYCNGGSLADAISE---NYRIMSYFKEAELKDLLL 120
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP-------------------KLCDFG 335
+ + Y+H+ + +VH DIKPSNI +S IP K+ D G
Sbjct: 121 QVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 177
Query: 336 LATWTSAPSV 345
T S+P V
Sbjct: 178 HVTRISSPQV 187
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 349
++HRD+KPSN+ ++ K+ DFGLA T F+
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 180
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 55 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 110
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 111 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 162
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 29/187 (15%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKES--SKAFCRELMIASSL-H 237
T F + +G G VFK L AIKR K S + RE+ + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H ++V + + + + +Y +GGSL + E R S + + L +
Sbjct: 70 HSHVVRYFSAWAEDDH-MLIQNEYCNGGSLADAISEN---YRIMSYFKEAELKDLLLQVG 125
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP-------------------KLCDFGLAT 338
+ Y+H+ + +VH DIKPSNI +S IP K+ D G T
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
Query: 339 WTSAPSV 345
S+P V
Sbjct: 183 RISSPQV 189
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 29/187 (15%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKES--SKAFCRELMIASSL-H 237
T F + +G G VFK L AIKR K S + RE+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 238 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 297
H ++V + + + + +Y +GGSL + E R S + + L +
Sbjct: 68 HSHVVRYFSAWAEDDH-MLIQNEYCNGGSLADAISEN---YRIMSYFKEAELKDLLLQVG 123
Query: 298 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP-------------------KLCDFGLAT 338
+ Y+H+ + +VH DIKPSNI +S IP K+ D G T
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 339 WTSAPSV 345
S+P V
Sbjct: 181 RISSPQV 187
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 181 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCRELMIASS 235
T F + +G G VFK L AIKR K D++++ RE+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA---LREVYAHAV 62
Query: 236 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 294
L H ++V + + + + +Y +GGSL + E R S + + L
Sbjct: 63 LGQHSHVVRYFSAWAEDDH-MLIQNEYCNGGSLADAISE---NYRIMSYFKEAELKDLLL 118
Query: 295 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP-------------------KLCDFG 335
+ + Y+H+ + +VH DIKPSNI +S IP K+ D G
Sbjct: 119 QVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 175
Query: 336 LATWTSAPSV 345
T S+P V
Sbjct: 176 HVTRISSPQV 185
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L + K + + Y++ G+ Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIV----KCAKLTDDHVQFLIYQILRGLK----YIHS 139
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 296 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
I + Y+H+ ++HRD+KPSN+ ++ K+ DFGLA T
Sbjct: 163 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 205
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 193 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 250
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 251 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 305
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 306 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 341
++HRD+KPSN+ ++ K+ FGLA T
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILGFGLARHTD 176
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 227 CRELMIASSLHHPNIVPLVGFCIDPEQG-LFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 285
C L I S HPN++P++G C P LI + GSL LHE V S
Sbjct: 58 CPRLRIFS---HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQA- 113
Query: 286 WSVRYKVALGIAESVAYLH 304
K AL A A+LH
Sbjct: 114 ----VKFALDXARGXAFLH 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,221,057
Number of Sequences: 62578
Number of extensions: 443840
Number of successful extensions: 3008
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 1301
Number of HSP's gapped (non-prelim): 1122
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)