BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017414
(372 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/361 (73%), Positives = 315/361 (87%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
FWN MVAGYAKVGD++NAR LFE M E+NVISWT +IAGYAQMD+PNEAIT+FRRMQ+E
Sbjct: 207 FWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE 266
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDEIAMLAALSACA LGA+ELGEWIHNYI+++GL+ IVPLNNALIDMYAK GKI KAL
Sbjct: 267 VEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+NM++KSVITWT+MI GLALHGLGREAL+MFS MER R+KPNEITF+AILSACCHVG
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE+GR YF M ++YGI+PKI+ YGCMIDLLGRAG+LQEA++L+R MPFEANA IWGSL
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA+ I+GD ELG+ ALQHLIK+EPHNSGNY +LSNIYA +WNE+G +RKVMRD GVK
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVA 370
KMPG S IEV+ RVHEFVAGD HP +R++++LCKIN Q K A ++Q E +LES+
Sbjct: 507 KMPGGSCIEVNNRVHEFVAGDKLHPQSERIFEVLCKINLQSKIAMYVQKEHVEMLESNKE 566
Query: 371 S 371
S
Sbjct: 567 S 567
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 46/335 (13%)
Query: 2 FTLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
F LSR L + + + + +G + + ++F T ++ + T+I + + E
Sbjct: 63 FMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATE 122
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
AI L+ R+ +++ D ++ L A +L A+ +G IH GL + + + ALI
Sbjct: 123 AILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQ 182
Query: 119 M-------------------------------YAKSGKIGKALQVFENMKNKSVITWTTM 147
M YAK G + A +FE M ++VI+WT +
Sbjct: 183 MYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAV 242
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAG A EA+ MF RM+ V+P+EI +A LSAC H+G +ELG N + ++G
Sbjct: 243 IAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHG 301
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELG 263
+ + +ID+ + G +++A ++ + M ++ W S++ ++G +E+
Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS-VITWTSMIDGLALHGLGREALEMF 360
Query: 264 ECALQHLIKLEPHNSGNYAILSNIYAI----LGRW 294
C ++ IK P+ AILS + +GRW
Sbjct: 361 SCMERNRIK--PNEITFVAILSACCHVGLVEMGRW 393
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+L+ L C+ L + H ++ GL+ L + I+ + G + +F +
Sbjct: 44 LLSLLKQCSNLKHLH---QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKT 100
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ + T+I L+ L EA+ +++R+ + ++ + + +L A + + +GR+
Sbjct: 101 RPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQ 160
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ G+ I +I + G + EA +L + F + A W +++A
Sbjct: 161 -IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFR-DVAFWNAMVAGYAKV 218
Query: 258 GDVELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNES 297
GDV+ +HL + P N ++ + YA + R NE+
Sbjct: 219 GDVDNA----RHLFERMPERNVISWTAVIAGYAQMDRPNEA 255
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/361 (73%), Positives = 315/361 (87%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
FWN MVAGYAKVGD++NAR LFE M E+NVISWT +IAGYAQMD+PNEAIT+FRRMQ+E
Sbjct: 207 FWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE 266
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDEIAMLAALSACA LGA+ELGEWIHNYI+++GL+ IVPLNNALIDMYAK GKI KAL
Sbjct: 267 VEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+NM++KSVITWT+MI GLALHGLGREAL+MFS MER R+KPNEITF+AILSACCHVG
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE+GR YF M ++YGI+PKI+ YGCMIDLLGRAG+LQEA++L+R MPFEANA IWGSL
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA+ I+GD ELG+ ALQHLIK+EPHNSGNY +LSNIYA +WNE+G +RKVMRD GVK
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVA 370
KMPG S IEV+ RVHEFVAGD HP +R++++LCKJN Q K A ++Q E +LES+
Sbjct: 507 KMPGGSCIEVNNRVHEFVAGDKLHPQSERIFEVLCKJNLQSKIAMYVQKEHVEMLESNKE 566
Query: 371 S 371
S
Sbjct: 567 S 567
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 46/335 (13%)
Query: 2 FTLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
F LSR L + + + + +G + + ++F T ++ + T+I + + E
Sbjct: 63 FMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATE 122
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
AI L+ R+ +++ D ++ L A +L A+ +G IH GL + + + ALI
Sbjct: 123 AILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQ 182
Query: 119 M-------------------------------YAKSGKIGKALQVFENMKNKSVITWTTM 147
M YAK G + A +FE M ++VI+WT +
Sbjct: 183 MYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAV 242
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAG A EA+ MF RM+ V+P+EI +A LSAC H+G +ELG N + ++G
Sbjct: 243 IAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHG 301
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELG 263
+ + +ID+ + G +++A ++ + M ++ W S++ ++G +E+
Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS-VITWTSMIDGLALHGLGREALEMF 360
Query: 264 ECALQHLIKLEPHNSGNYAILSNIYAI----LGRW 294
C ++ IK P+ AILS + +GRW
Sbjct: 361 SCMERNRIK--PNEITFVAILSACCHVGLVEMGRW 393
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+L+ L C+ L + H ++ GL+ L + I+ + G + +F +
Sbjct: 44 LLSLLKQCSNLKHLH---QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKT 100
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ + T+I L+ L EA+ +++R+ + ++ + + +L A + + +GR+
Sbjct: 101 RPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQ 160
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ G+ I +I + G + EA +L + F + A W +++A
Sbjct: 161 -IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFR-DVAFWNAMVAGYAKV 218
Query: 258 GDVELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNES 297
GDV+ +HL + P N ++ + YA + R NE+
Sbjct: 219 GDVDNA----RHLFERMPERNVISWTAVIAGYAQMDRPNEA 255
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/357 (71%), Positives = 297/357 (83%), Gaps = 1/357 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ GYAK GDL NAR LFE M ++NVISWT LI GYAQ ++P++AI LFRRMQ+EN
Sbjct: 150 LWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRMQLEN 209
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKA 129
V+PDEIAML AL+ACA+LGA+ELGEWI +YI++ GL T +PLNNALIDMYAKSG I A
Sbjct: 210 VEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSA 269
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
LQVFENM +K++ITWTTMIAGLALHGLG EAL+MFSRMERARVKPN+ITFIAILSAC HV
Sbjct: 270 LQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHV 329
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ GR YFN M SRYGIEPKIE YGCMIDLLGRAG+L+EA+ LL +MPFE NA IWGS
Sbjct: 330 GLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGS 389
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA N +GD ELGE ALQHL++LEP NSGNYA+LSNIYA GRWNES +RKVM D GV
Sbjct: 390 LLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGV 449
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
KKMPG S IEV+ RVHEF+AG+ SH FDR+ ++L KIN Q+ ++H + E +LE
Sbjct: 450 KKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQEVLSKINRQLGLSQHFEKESGALLE 506
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 56/288 (19%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----- 109
P +I L+ +Q+ ++PD + AL A + +++ G +H+ ++GL++
Sbjct: 58 HPKASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLT 117
Query: 110 ------------------------------VPLNNALIDMYAKSGKIGKALQVFENMKNK 139
V L NA+++ YAK G + A +FE M +
Sbjct: 118 AFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQR 177
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---R 196
+VI+WT +I G A +A+ +F RM+ V+P+EI + L+AC +G +ELG R
Sbjct: 178 NVISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIR 237
Query: 197 RYFNIMKSRYG-IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
Y + R G + I +ID+ ++G ++ A ++ M + W +++A
Sbjct: 238 HYID----RLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHK-TIITWTTMIAGLA 292
Query: 256 IYGDVELGECALQHLIKLE-----PHNSGNYAILSNIYAI----LGRW 294
++G LG AL+ ++E P++ AILS + GRW
Sbjct: 293 LHG---LGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRW 337
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 289/356 (81%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN MVAGY KVG+L +AR +F M ++NVISWTTLIAGYAQ ++P+EAI LFR+MQ+E
Sbjct: 190 LWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEE 249
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDEIAMLA LSACA LGA+ELGEWIHNYIE++GL IV L NALIDMYAKSG I +AL
Sbjct: 250 VEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRAL 309
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFENMK KSVITW+T+IA LALHGLG EA+DMF RME+A+V+PNE+TF+AILSAC HVG
Sbjct: 310 EVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVG 369
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V++GR YF+ M+S Y IEPKIE YGCMIDLL RAGYLQEA+KLL MPFEANA IWGSL
Sbjct: 370 MVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSL 429
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAASN + D EL + AL+HL KLEP NSGNY +LSN YA LG+WNESG +RK+MR+ GVK
Sbjct: 430 LAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVK 489
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K PG S IE++ V+EF+AGD S +Y +LCKI Q+K A Q E+S L+
Sbjct: 490 KAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEWSKFLD 545
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 FTLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
F L R L + F + + +G + A ++F T ++ + T I ++ P
Sbjct: 46 FMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPIN 105
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
AI L+ R++++ ++PD ++ + L A +L AVE+G IH L+ V + +LI
Sbjct: 106 AIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQ 165
Query: 119 MYA-------------------------------KSGKIGKALQVFENMKNKSVITWTTM 147
MY+ K G++ A +VF M ++VI+WTT+
Sbjct: 166 MYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTL 225
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAG A EA+++F +M+ V+P+EI +A+LSAC +G +ELG N ++ ++G
Sbjct: 226 IAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIE-KHG 284
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ + Y +ID+ ++G ++ A ++ M + + W +++AA ++G LG A+
Sbjct: 285 LCRIVSLYNALIDMYAKSGNIRRALEVFENMK-QKSVITWSTVIAALALHG---LGGEAI 340
Query: 268 QHLIKLE-----PHNSGNYAILS 285
+++E P+ AILS
Sbjct: 341 DMFLRMEKAKVRPNEVTFVAILS 363
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH ++ L+ + ID G A +F N + + + T I L+
Sbjct: 43 IHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSS 102
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A+ +++R+ ++P+ + ++L A + VE+GR+ S ++ +
Sbjct: 103 PINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSS-ALDMDVNVAT 161
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+I + G++ +A KL + F+ + A+W +++A G V++GE
Sbjct: 162 SLIQMYSSCGFVSDARKLFDFVGFK-DVALWNAMVA-----GYVKVGE 203
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/356 (66%), Positives = 298/356 (83%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ YAK+ D+ NA+ LF+ M ++N+ISWT LI+GYA +++P++AI +FR MQ++N
Sbjct: 179 LWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQN 238
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PDEI +LA LSACAQLGA+ELGEWI NYI+ +GL+ VPL+NALIDMYAKSG I +AL
Sbjct: 239 VVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRAL 298
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+FE+MK+K+++TWTTMIAGLALHGLG +AL+MFSRMER RVKPNEITFIA+LSAC HVG
Sbjct: 299 LIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVG 358
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+L R +F M+SRY I+PKIE YGCMIDLLGRAGYLQEA++LL++MPFE NAAIWGSL
Sbjct: 359 LVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSL 418
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAAS +GD LGE L+HLI+LEP+NSGNYA+LSNIYA LGRW S +RK+MRD GVK
Sbjct: 419 LAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVK 478
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K+PG S+IEV+ RV+EF+AG+TSHP FD +Y+++ KIN Q + +E L+ E +LE
Sbjct: 479 KIPGGSFIEVNNRVNEFIAGETSHPQFDEIYEVIYKINEQSRLSESLEKECFELLE 534
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 44/283 (15%)
Query: 28 ARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 86
A +LF +T N+ + T+I + QP+ +I LF R+Q ++PD + AL A
Sbjct: 62 AYSLFTSLTHPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVI 121
Query: 87 QLGAVELGEWIHNYIEQYGLNTI-------------------------VPLN-------N 114
+L A + G H+ ++GL++ +PL N
Sbjct: 122 RLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARNVALWN 181
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
A++ YAK + A +F++M +++I+WT +I+G A +A+ +F M+ V P
Sbjct: 182 AMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVP 241
Query: 175 NEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+EIT +A+LSAC +G +ELG R Y +I +G+ + + +ID+ ++G ++ A
Sbjct: 242 DEITLLAVLSACAQLGALELGEWIRNYIDI----HGLHRNVPLHNALIDMYAKSGNIKRA 297
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ M + W +++A ++G LG AL+ ++E
Sbjct: 298 LLIFESMKHKT-IVTWTTMIAGLALHG---LGTQALEMFSRME 336
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/347 (68%), Positives = 282/347 (81%), Gaps = 3/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N M+ Y KVGD++NAR LF+ M E K+V SWT +I+GY Q PNEAI LFRRMQ+EN
Sbjct: 180 NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLEN 239
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKPDEIA+LA LSACA LGA+ LGEWIHNYIE++ L+ IVPL N+LIDMYAKSG I KAL
Sbjct: 240 VKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKAL 299
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHV 189
++FENMK+K++ITWTTMIAGLALHGLG+EAL +FS ME+ RVKPNE+TFIAILSAC HV
Sbjct: 300 ELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHV 359
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVELGR YF M+SRYGIEPKIE YGCMIDLLGRAG+LQEA++++ RMPFEANAAIWGS
Sbjct: 360 GLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGS 419
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAAS GD EL E AL+HL LEP + GNY++LSN YA LGRWNES +RKVM+D GV
Sbjct: 420 LLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGV 479
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
+K+PG S+IEV+ V+EF+AGD F +Y +L ++GQ+K H
Sbjct: 480 EKVPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDVLHSLDGQIKIEIH 526
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
LS+++ +N+++ YAK G++ A LFE M K +I+WTT+IAG A EA+ +F
Sbjct: 275 LSKIV-PLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVF 333
Query: 64 RRMQVEN-VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYA 121
M+ E+ VKP+E+ +A LSAC+ +G VELG ++ + +YG+ + +ID+
Sbjct: 334 SCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLG 393
Query: 122 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
++G + +A ++ M + W +++A G L EAL + +E
Sbjct: 394 RAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLE 444
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/345 (65%), Positives = 277/345 (80%), Gaps = 7/345 (2%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKN--VISWTTLIAGYAQMDQPNEAITLFRRMQV 68
WN M+AGYAKVG+++NAR LFE M EK+ V+SWTTLI+GY Q PNEAITLFR M +
Sbjct: 195 LWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLL 254
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKI 126
+NV+PDEIA+LA LSACA LGA++LGEWIHNYIE++ L VPL N+LIDMYAKSG I
Sbjct: 255 QNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDI 314
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
KA Q+F+NMK+K++ITWTT+I+GLALHG G+EALD+FS ME+ARVKPNE+T IA+LSAC
Sbjct: 315 SKARQLFQNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSAC 374
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
HVGLVELGR F M+S+YGIEPKIE YGCMIDLLGRAGYLQEA +L+R MP EANAA+
Sbjct: 375 SHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAV 434
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WGSLL+ASN YGD L AL+HL LEPHN GNY++LSN YA LG W E+ +RKVMRD
Sbjct: 435 WGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRD 494
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
+K+PG S++E++ RV+EF+AGD + F +L INGQ+
Sbjct: 495 TCAEKVPGVSFVELNNRVYEFIAGDKLNICF---LDVLQSINGQL 536
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
L+R +Y + ++ YA ++N R + NVI W P AI+LF
Sbjct: 65 LARFIYTSASLGLSSYAYSVFISNHRP--SIFFYNNVI-WAL------SSSNPTRAISLF 115
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT--------------- 108
+++ + PD + L A L AV +G+ IH GL++
Sbjct: 116 NAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSC 175
Query: 109 ----------------IVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAG 150
PL NA++ YAK G + A +FE M K++ V++WTT+I+G
Sbjct: 176 AHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISG 235
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIE 209
EA+ +F M V+P+EI +A+LSAC +G ++LG N I K +
Sbjct: 236 YTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLR 295
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +ID+ ++G + +A +L + M + W ++++ ++G
Sbjct: 296 KTVPLCNSLIDMYAKSGDISKARQLFQNMKHKT-IITWTTVISGLALHG 343
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/341 (59%), Positives = 267/341 (78%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K GDL +AR LF+ M E+NV+SWTT+I GYAQM +P EA+ +FRRMQVE +
Sbjct: 148 WNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGI 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A+L+ LSAC LGAV+LGEW+H ++ + GL +PL N++IDMY K G I KA++
Sbjct: 208 EPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVE 267
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ KSV+TWTT+IAG ALHGLG +A++MF RMER + PN++TF+AILSAC HVGL
Sbjct: 268 VFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGL 327
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR YFNIM S+Y I+P++E YGCM+DLLGRAG L+EA+ L++ MP +ANAAIWG+LL
Sbjct: 328 TDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALL 387
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AAS +GD +LGE AL HLI+LEP NSGNY +LSNI+A RW++ K+RK M++ G++
Sbjct: 388 AASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRN 447
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S IEV VHEF + D SHP ++ ++LC+IN MK
Sbjct: 448 VPGASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMK 488
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 258/346 (74%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GDL AR LF++M +NV+SWT +I YAQM QP EAI +FRRMQVE +
Sbjct: 141 WNVMIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGI 200
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A+L+ LSAC LG V+LGEW+H ++ + GL +PL NA+IDMY K G + KAL+
Sbjct: 201 EPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALE 260
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ KS++TWTTMIAG ALHGLG EA+++F RME+ V PN+ITF+A+LS C HVGL
Sbjct: 261 VFEGMEQKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGL 320
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR YF M S+Y I+P++E YGCMIDLLGRAG L EA L++ MPF+ANAAIWG+LL
Sbjct: 321 TDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALL 380
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA+ +GD ELGE AL HLI+LEPHNSGNY +LSNIYA RW+ ++R MRD G++
Sbjct: 381 AAARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRN 440
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PG S I+V VHEF + D SHP ++ ++LC IN +K H+
Sbjct: 441 VPGASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHI 486
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 258/346 (74%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GDL AR LF++M +NV+SWT +I YAQM QP EAI +FRRMQVE +
Sbjct: 145 WNVMIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGI 204
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A+L+ LSAC LG V+LGEW+H ++ + GL +PL NA+IDMY K G + KAL+
Sbjct: 205 EPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALE 264
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ KS++TWTTMIAG ALHGLG EA+++F RME+ V PN+ITF+A+LS C HVGL
Sbjct: 265 VFEGMEQKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGL 324
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR YF M S+Y I+P++E YGCMIDLLGRAG L EA L++ MPF+ANAAIWG+LL
Sbjct: 325 TDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALL 384
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA+ +GD ELGE AL HLI+LEPHNSGNY +LSNIYA RW+ ++R MRD G++
Sbjct: 385 AAARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRN 444
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PG S I+V VHEF + D SHP ++ ++LC IN +K H+
Sbjct: 445 VPGASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHI 490
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/342 (58%), Positives = 262/342 (76%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M++GY K G+L AR LF++M +NV+SWTT+I YAQM QP EA+ +FRRMQVE
Sbjct: 138 WNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEG 197
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PD +A+L+ LSAC LGAV+LGEW+H ++ + GL +PL NA+IDMY K G + KA+
Sbjct: 198 IEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAV 257
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE M KSV+TWTT+IAG ALHGLG EA++MF RME V PN++TF+AILSAC HVG
Sbjct: 258 EVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVG 317
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L +LGR YF IM S+Y I+ ++E YGCM+DLLGRAGYL EA+ L++ MPF+ANAAIWG+L
Sbjct: 318 LTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGAL 377
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA+ +GD ELG+ AL HLI+LEPHNSGNY +LSNIYA RW++ K+RK M+D G++
Sbjct: 378 LAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLR 437
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S IEV VHEF + D SHP ++ ++LC+I MK
Sbjct: 438 NVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMK 479
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 46/243 (18%)
Query: 93 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
LG +H+ I + GL + ++ +LI Y G++ A VF+ +K + W MI+G
Sbjct: 87 LGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYV 146
Query: 153 LHG-----------------------LGR--------EALDMFSRME-RARVKPNEITFI 180
G +G EA+++F RM+ ++P+ + +
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
++LSAC +G V+LG + + R G+ +I +ID+ + G +++A ++ M
Sbjct: 207 SVLSACGDLGAVDLG-EWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMD- 264
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLE-----PHNSGNYAILSNIYAI----L 291
+ + W +++A ++G LG A++ ++E P++ AILS + L
Sbjct: 265 QKSVVTWTTVIAGFALHG---LGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDL 321
Query: 292 GRW 294
GRW
Sbjct: 322 GRW 324
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 262/341 (76%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K GD +AR LF+ M E+NV+SWTT+I GYAQM +P +A+ +FRRMQVE +
Sbjct: 147 WNVMIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGI 206
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D +A+L+ L+AC LGAV+LGEW+H ++ + GL +PL N++IDMY K G I KA++
Sbjct: 207 EADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVE 266
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ KSV+TWTT+IAG ALHGLG +A++MF RMER + PN +TF+AILSAC HVGL
Sbjct: 267 VFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGL 326
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR YFNIM S+Y I+P++E YGCM+DLLGRAG L+EA+ L++ MP +ANAAIWG+LL
Sbjct: 327 TDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALL 386
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA+ +GD LGE AL HLI+LEP+NSGNY +LSNI+A RW + K+RK MR+ G++
Sbjct: 387 AAARTHGDAGLGEQALLHLIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRN 446
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S IEV VHEF + D SHP + ++LC+I+ MK
Sbjct: 447 VPGASSIEVDGMVHEFTSRDWSHPFIHTICEVLCEIDTNMK 487
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 45/223 (20%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGRE--------- 159
++++L+ +Y G + A VF+ M + V+ W MIAG G RE
Sbjct: 115 VSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPERN 174
Query: 160 -------------------ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
A+++F RM+ ++ + + +++L+AC +G V+LG + +
Sbjct: 175 VVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLG-EWVH 233
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
R G+ +I +ID+ + G +++A ++ M E + W +L+A ++G
Sbjct: 234 RFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGME-EKSVVTWTTLIAGFALHG-- 290
Query: 261 ELGECALQHLIKLE-----PHNSGNYAILSNIYAI----LGRW 294
LG A++ ++E P+ AILS + LGRW
Sbjct: 291 -LGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRW 332
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 277/346 (80%), Gaps = 2/346 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
WN ++AGY KVG+++ AR L E+M +N +SWT +I+GYA+ + +EAI +F+RM +E
Sbjct: 185 WNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLME 244
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
NV PDE+ +LA LSACA LG++ELGE I +Y++ G+N V LNNA+IDMYAKSG I KA
Sbjct: 245 NVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L+VFE++ ++V+TWTT+I GLA HG G EAL MF RM +A VKPN++TFIAILSAC HV
Sbjct: 305 LEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHV 364
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G V+LG R+FN M+S+YGI P IE YGCMIDLLGRAG L+EAE++++ MPFE+NAAIWGS
Sbjct: 365 GWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGS 424
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAASN++ D+++GE AL LIKLEP+NSGNY +L+N+Y+ LGRW+ES +RK+M+ +GV
Sbjct: 425 LLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGV 484
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
KK+ G S IEV RV++F++GD SHP ++++++L +++ Q++ E
Sbjct: 485 KKLAGESSIEVENRVYKFISGDLSHPQVEKIHELLQEMDLQIQSNE 530
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 40/304 (13%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE---AITLFRRMQVENVKPDEI 76
+ G L A ++F N T+I + +D+ N AIT++R+ KPD
Sbjct: 58 SNAGHLRYAYSVFTHQPFPNTYLHNTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTF 117
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
L ++ V G +H +G ++ V + LI MY+ G +G A +VF+ M
Sbjct: 118 TFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEM 177
Query: 137 KNKSV---------------------------------ITWTTMIAGLALHGLGREALDM 163
+ + V ++WT +I+G A G EA+++
Sbjct: 178 RVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEV 237
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F RM V P+E+T +A+LSAC +G +ELG R + + R G+ + +ID+
Sbjct: 238 FQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYA 296
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNY 281
++G + +A ++ + E N W +++ +G ++K ++P++
Sbjct: 297 KSGNITKALEVFESVN-ERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFI 355
Query: 282 AILS 285
AILS
Sbjct: 356 AILS 359
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 277/343 (80%), Gaps = 2/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
WN ++AGY KVG+++ AR+L E+M +N +SWT +I+GYA+ + +EAI +F+RM +E
Sbjct: 185 WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME 244
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
NV+PDE+ +LA LSACA LG++ELGE I +Y++ G+N V LNNA+IDMYAKSG I KA
Sbjct: 245 NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L VFE + ++V+TWTT+IAGLA HG G EAL MF+RM +A V+PN++TFIAILSAC HV
Sbjct: 305 LDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHV 364
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G V+LG+R FN M+S+YGI P IE YGCMIDLLGRAG L+EA+++++ MPF+ANAAIWGS
Sbjct: 365 GWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGS 424
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAASN++ D+ELGE AL LIKLEP+NSGNY +L+N+Y+ LGRW+ES +R +M+ +GV
Sbjct: 425 LLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGV 484
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KKM G S IEV RV++F++GD +HP +R+++IL +++ Q++
Sbjct: 485 KKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE---AITLFRRMQVENVKPDEI 76
+ G L A ++F N T+I + +D+PN AIT++R++ KPD
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTF 117
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
L ++ V G IH + +G ++ V + LI MY G +G A ++F+ M
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 137 KNKSVITWTTMIA---------------------------------GLALHGLGREALDM 163
K V W ++A G A G EA+++
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F RM V+P+E+T +A+LSAC +G +ELG R + + R G+ + +ID+
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYA 296
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNY 281
++G + +A + + E N W +++A +G ++K + P++
Sbjct: 297 KSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 282 AILS 285
AILS
Sbjct: 356 AILS 359
>gi|125569795|gb|EAZ11310.1| hypothetical protein OsJ_01174 [Oryza sativa Japonica Group]
Length = 326
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/312 (58%), Positives = 234/312 (75%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
+I YAQM QP EAI +FRRMQVE ++PD +A+L+ LSAC LG V+LGEW+H ++ + G
Sbjct: 2 VIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRG 61
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L +PL NA+IDMY K G + KAL+VFE M+ KS++TWTTMIAG ALHGLG EA+++F
Sbjct: 62 LCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLEAVELFR 121
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
RME+ V PN+ITF+A+LS C HVGL +LGR YF M S+Y I+P++E YGCMIDLLGRA
Sbjct: 122 RMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRA 181
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 285
G L EA L++ MPF+ANAAIWG+LLAA+ +GD ELGE AL HLI+LEPHNSGNY +LS
Sbjct: 182 GCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNYILLS 241
Query: 286 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 345
NIYA RW+ ++R MRD G++ +PG S I+V VHEF + D SHP ++ ++LC
Sbjct: 242 NIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGSHPSLHKIREVLC 301
Query: 346 KINGQMKFAEHL 357
IN +K H+
Sbjct: 302 AINSNIKSVGHI 313
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 2 FTLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
F L R L + N ++ Y K G + A +FE M +K++++WTT+IAG+A E
Sbjct: 56 FVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLE 115
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLNTIVPLNNALI 117
A+ LFRRM+ ENV P++I LA LS C+ +G +LG W + QY + V +I
Sbjct: 116 AVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMI 175
Query: 118 DMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGREAL 161
D+ ++G + +A + ++M K+ W ++A HG LG +AL
Sbjct: 176 DLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQAL 223
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/344 (49%), Positives = 244/344 (70%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYA+ G L+ A LF+ M +K+V+ W +I GY ++ EA+ LF MQ N+
Sbjct: 277 WTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI 336
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M++ LSAC+QLGA+++G WIH+YIE++ L+ V L ALIDMYAK GKI KA+Q
Sbjct: 337 NPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQ 396
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + ++ +TWT +I+GLALHG A+ FS M V P+E+TF+ +LSACCH GL
Sbjct: 397 VFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGL 456
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ M S++ + PK++ Y CM+DLLGRAG L+EAE+L++ MP EA+A +WG+L
Sbjct: 457 VEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALF 516
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+V +GE A L++++PH+SG Y +L+N+Y W E+GK RK+MR GV+K
Sbjct: 517 FACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEK 576
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PGCS IEV+ V+EF+ D SHP +++Y+ L ++ Q++ E
Sbjct: 577 TPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVE 620
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 154/278 (55%), Gaps = 33/278 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GDL+ AR +F+ ++++SW ++I GY + EA+ +R M+VE +K
Sbjct: 146 NAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIK 205
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M+ +S+CAQL ++LG H YIE+ GL VPL NAL+DMY K G + A ++
Sbjct: 206 PDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKL 265
Query: 133 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 161
F++M NK++++WTTM+ G A GL G+EAL
Sbjct: 266 FDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEAL 325
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F+ M+ + P+E+T ++ LSAC +G +++G + ++ ++ + + +ID+
Sbjct: 326 ALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE-KHELSLNVALGTALIDM 384
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ G + +A ++ + +P N+ W ++++ ++G+
Sbjct: 385 YAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 421
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRR-MQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
N SW I G+ + P EA+ L++R +Q + KPD ACA+L + +G I
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 129
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
++ G ++ + ++NA+I + G + A ++F+ + +++W +MI G G
Sbjct: 130 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 189
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL+ + M+ +KP+E+T I ++S+C + ++LGR ++ G++ +
Sbjct: 190 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVPLANA 248
Query: 218 MIDLLGRAGYLQEAEKLLRRM 238
++D+ + G L+ A KL M
Sbjct: 249 LMDMYMKCGNLESARKLFDSM 269
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 242/355 (68%), Gaps = 3/355 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYAK G L +A LF M EK+V+ W LI G+ Q + EA+ LF MQ +V
Sbjct: 325 WTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSV 384
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+I ++ LSAC+QLGA+++G W+H+Y++++ L V L AL+DMYAK G I KA+Q
Sbjct: 385 APDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQ 444
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M ++ +TWT +I GLALHG A+ FS M + P+EITFI +LSACCH GL
Sbjct: 445 VFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGL 504
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR YF M S+YGI PK++ Y C++DLLGRAG+L+EAE+L+R MPFE +A +WG+L
Sbjct: 505 VDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALF 564
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
S I+G+V +GE A L++L+PH+ G Y +L+N+Y W ++ K+RK+M + GV+K
Sbjct: 565 FGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEK 624
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE---HLQNEFSG 363
PGCS IE++ V++F+ D SHP +++Y+ L ++ Q++ E L EFS
Sbjct: 625 TPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDPSLFKEFSS 679
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 33/277 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ G+L AR LF+ ++++SW ++I GY + +EA L+ +M NV
Sbjct: 194 NAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVM 253
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M+ +SA AQL + LG +H IE+ GLN VPL NAL+DMY K I A +
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 133 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 161
FENM K+V++WTTM+ G A GL +EAL
Sbjct: 314 FENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEAL 373
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ + V P++IT + LSAC +G +++G + + ++ + + ++D+
Sbjct: 374 ALFHEMQASSVAPDKITVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDM 432
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G +++A ++ MP N+ W +++ ++G
Sbjct: 433 YAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHG 468
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 10/238 (4%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALS 83
LNNA L N SW I GY + + P A+ L+R M + + PD
Sbjct: 111 LNNAANL-------NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFK 163
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
CA I ++ Q G ++ + ++NA+I + G++ A ++F+ + +++
Sbjct: 164 VCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVS 223
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++I G GL EA D++ +M V P+E+T I ++SA + + LGR+ ++
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
G+ + ++D+ + ++ A+ L M + W +++ +G +E
Sbjct: 284 -EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMT-KKTVVSWTTMVIGYAKFGLLE 339
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 242/355 (68%), Gaps = 3/355 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYAK G L +A LF M EK+V+ W LI G+ Q + EA+ LF MQ +V
Sbjct: 325 WTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSV 384
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+I ++ LSAC+QLGA+++G W+H+Y++++ L V L AL+DMYAK G I KA+Q
Sbjct: 385 APDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQ 444
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M ++ +TWT +I GLALHG A+ FS M + P+EITFI +LSACCH GL
Sbjct: 445 VFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGL 504
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR YF M S+YGI PK++ Y C++DLLGRAG+L+EAE+L+R MPFE +A +WG+L
Sbjct: 505 VDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALF 564
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
S I+G+V +GE A L++L+PH+ G Y +L+N+Y W ++ K+RK+M + GV+K
Sbjct: 565 FGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEK 624
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE---HLQNEFSG 363
PGCS IE++ V++F+ D SHP +++Y+ L ++ Q++ E L EFS
Sbjct: 625 TPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDPSLFKEFSS 679
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 33/277 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ G+L AR LF+ ++++SW ++I GY + +EA L+ +M NV
Sbjct: 194 NAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVM 253
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M+ +SA AQL + LG +H IE+ GLN VPL NAL+DMY K I A +
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 133 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 161
FENM K+V++WTTM+ G A GL +EAL
Sbjct: 314 FENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEAL 373
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ + V P++IT + LSAC +G +++G + + ++ + + ++D+
Sbjct: 374 ALFHEMQASSVAPDKITVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDM 432
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G +++A ++ MP N+ W +++ ++G
Sbjct: 433 YAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHG 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 10/238 (4%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALS 83
LNNA L NV SW I GY + + P A+ L+R M + + PD
Sbjct: 111 LNNAANL-------NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFK 163
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
CA I ++ Q G ++ + ++NA+I + G++ A ++F+ + +++
Sbjct: 164 VCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVS 223
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++I G GL EA D++ +M V P+E+T I ++SA + + LGR+ ++
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
G+ + ++D+ + ++ A+ L M + W +++ +G +E
Sbjct: 284 -EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMT-KKTVVSWTTMVIGYAKFGLLE 339
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 241/350 (68%), Gaps = 1/350 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
W TM+ GYAK+G+ + A+ +F+ M +++ +W LI+ Y Q +P EA+ LF +Q+ +
Sbjct: 306 WTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKT 365
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE+ +++ LSACAQLGA++LG WIH YI++ G+ L +LIDMY K G + KAL
Sbjct: 366 AKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKAL 425
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF +++ K V W+ MIAGLA+HG G++A+ +FS+M+ +VKPN +TF IL AC HVG
Sbjct: 426 MVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVG 485
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR +FN M+ YG+ P ++ Y CM+D+LGRAG L+EA +L+ +MP A++WG+L
Sbjct: 486 LVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGAL 545
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ +V L E A LI+LEP N G Y +LSNIYA G+W+ +RK+MRD+G+K
Sbjct: 546 LGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLK 605
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
K PGCS IEV VHEF+ GD SHP ++Y L +I +++ ++ N+
Sbjct: 606 KEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNK 655
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 148/278 (53%), Gaps = 34/278 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YAK G+L +F + ++V+SW ++I + Q P EA+ LF+ M+ +NVK
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M+ LSACA+ E G W+H+YIE+ + + L+NA++DMY K G + A ++
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 133 FENMKNKSVITWTTMIAGLA-------------------------------LHGLGREAL 161
F+ M K +++WTTM+ G A G +EAL
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEAL 354
Query: 162 DMFSRMERARV-KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
++F ++ ++ KP+E+T ++ LSAC +G ++LG + ++ + G++ +ID
Sbjct: 355 ELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLID 413
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G LQ+A + + + +W +++A ++G
Sbjct: 414 MYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMHG 450
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 134/264 (50%), Gaps = 9/264 (3%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F+ SRL+ A + L+ A+ +F+ + N+ +W TLI YA P++++
Sbjct: 68 FSASRLI------TAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLL 121
Query: 62 LFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+F RM ++ PD+ + A ++L + G+ H + + L + V + N+LI Y
Sbjct: 122 IFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY 181
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
AK G++G +VF N+ + V++W +MI G EAL++F ME VKPN IT +
Sbjct: 182 AKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+LSAC E GR + ++ R I + M+D+ + G +++A++L +MP
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIE-RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP- 299
Query: 241 EANAAIWGSLLAASNIYGDVELGE 264
E + W ++L G+ + +
Sbjct: 300 EKDIVSWTTMLVGYAKIGEYDAAQ 323
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 238/348 (68%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K GDL+ AR LFE + EK++ISW +I GY+ M+ EA+ LFR+MQ NV+
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQ 131
P+++ ++ L ACA LGA++LG+WIH YI++ L T L +LIDMYAK G I A Q
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF MK KS+ +W MI+GLA+HG AL++F +M +P++ITF+ +LSAC H GL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VELGR+ F+ M Y I PK++ YGCMIDLLGRAG EAE L++ M + + AIWGSLL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++G+VELGE A +HL +LEP N G Y +LSNIYA GRW++ +IR + D G+KK
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+PGCS IEV VHEF+ GD H +Y++L +I+ ++ A H+ +
Sbjct: 603 VPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPD 650
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 154/252 (61%), Gaps = 1/252 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY G L++AR LFE + ++ +SW +IAGYAQ + EA+ F+ M+ NV
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E M+ LSACAQ G++ELG W+ ++IE +GL + + L NALIDMY+K G + KA
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K +I+W MI G + +EAL +F +M+++ V+PN++TF++IL AC ++G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG+ + ++ + +ID+ + G ++ A+++ M ++ + W +++
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS-WNAMI 439
Query: 252 AASNIYGDVELG 263
+ ++G +
Sbjct: 440 SGLAMHGHANMA 451
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 38/266 (14%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LS+L+ + G+L+ A LFE + + N W T+I G + P AI
Sbjct: 65 FALSKLIE------FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAID 118
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ RM + V+P+ L +CA++GA + G+ IH ++ + GL + ++ +LI+MYA
Sbjct: 119 FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYA 178
Query: 122 KSGKIG-------------------------------KALQVFENMKNKSVITWTTMIAG 150
++G++G A ++FE + + ++W MIAG
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG 238
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
A G EAL F M+RA V PNE T + +LSAC G +ELG + ++ +G+
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED-HGLGS 297
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLR 236
+ +ID+ + G L +A L
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFE 323
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +++ YAK G++ A+ +F M K++ SW +I+G A N A+ LFR+M+ E
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+PD+I + LSAC+ G VELG + + +E Y ++ + +ID+ ++G +A
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 130 LQVFENMKNKSV-ITWTTMIAGLALHG 155
+ +NM+ K W +++ +HG
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHG 549
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 165/343 (48%), Positives = 235/343 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+V+G+ +G+++ AR F+ M EK+ +SWT +I GY + ++ EA+ LFR MQ NV
Sbjct: 288 WTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 347
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACA LGA+ELGEWI YI++ + + + NALIDMY K G + KA
Sbjct: 348 KPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 407
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + TWT MI GLA++G G +ALDMFS M +A + P+EIT+I +LSAC H GL
Sbjct: 408 IFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGL 467
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF M S++GIEP I YGC++DLL RAG L+EA +++ MP +AN+ +WG+LL
Sbjct: 468 VDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 527
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +Y + ++ E ++ +++LEP N Y +L NIYA RWN+ ++R++M D G+KK
Sbjct: 528 AGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKK 587
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS IE++ RVHEFVAGD SHP + L K+ +K A
Sbjct: 588 TPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 630
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 147/287 (51%), Gaps = 40/287 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y G L+ AR +F++ + +VI+W +I+ Y ++ + E+ LF M+ + V P
Sbjct: 159 LVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPT 218
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ ++ LSAC++L + G+ +H+Y++ + + + L NA+IDMYA G++ AL +F
Sbjct: 219 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 278
Query: 135 NMKNKSVITWTTMIAGLALHGLG---------------------------------REAL 161
+M N+ +I+WTT+++G LG +EAL
Sbjct: 279 SMNNRDIISWTTIVSGFT--NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEAL 336
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F M+ VKP+E T +++L+AC H+G +ELG + R I+ + +ID+
Sbjct: 337 ELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDM 395
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
+ G + +AE + R M + + W +++ + G GE AL
Sbjct: 396 YFKCGDVDKAESIFREMS-QRDKFTWTAMIVGLAVNGH---GEKALD 438
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 5/288 (1%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD AR LF+ + E N+ W T+I GY+++D P ++L+ M VKPD
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ A+E G +H ++ ++GL V ++ AL+ MY G++ A VF+ VI
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
TW +I+ G E+ +F ME +V P +T + +LSAC + + G++ + +
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
K+ +E + MID+ G + A + R M + W ++++ G++++
Sbjct: 246 KN-CKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDV 303
Query: 263 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
A + K+ + ++ + + Y R+ E+ ++ + M+ VK
Sbjct: 304 ---ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 165/343 (48%), Positives = 235/343 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+V+G+ +G+++ AR F+ M EK+ +SWT +I GY + ++ EA+ LFR MQ NV
Sbjct: 309 WTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 368
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACA LGA+ELGEWI YI++ + + + NALIDMY K G + KA
Sbjct: 369 KPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 428
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + TWT MI GLA++G G +ALDMFS M +A + P+EIT+I +LSAC H GL
Sbjct: 429 IFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGL 488
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF M S++GIEP I YGC++DLL RAG L+EA +++ MP +AN+ +WG+LL
Sbjct: 489 VDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 548
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +Y + ++ E ++ +++LEP N Y +L NIYA RWN+ ++R++M D G+KK
Sbjct: 549 AGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKK 608
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS IE++ RVHEFVAGD SHP + L K+ +K A
Sbjct: 609 XPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 651
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 147/287 (51%), Gaps = 40/287 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y G L+ AR +F++ + +VI+W +I+ Y ++ + E+ LF M+ + V P
Sbjct: 180 LVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPT 239
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ ++ LSAC++L + G+ +H+Y++ + + + L NA+IDMYA G++ AL +F
Sbjct: 240 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 299
Query: 135 NMKNKSVITWTTMIAGLALHGLG---------------------------------REAL 161
+M N+ +I+WTT+++G LG +EAL
Sbjct: 300 SMNNRDIISWTTIVSGFT--NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEAL 357
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F M+ VKP+E T +++L+AC H+G +ELG + R I+ + +ID+
Sbjct: 358 ELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDM 416
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
+ G + +AE + R M + + W +++ + G GE AL
Sbjct: 417 YFKCGDVDKAESIFREMS-QRDKFTWTAMIVGLAVNGH---GEKALD 459
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 5/288 (1%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD AR LF+ + E N+ W T+I GY+++D P ++L+ M VKPD
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ A+E G +H ++ ++GL V ++ AL+ MY G++ A VF+ VI
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
TW +I+ G E+ +F ME +V P +T + +LSAC + + G++ + +
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
K+ +E + MID+ G + A + R M + W ++++ G++++
Sbjct: 267 KN-CKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDV 324
Query: 263 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
A + K+ + ++ + + Y R+ E+ ++ + M+ VK
Sbjct: 325 ---ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 170/366 (46%), Positives = 247/366 (67%), Gaps = 16/366 (4%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL----------------IAG 49
+L N ++ Y K G+L +AR LF+ MT K ++SWTT+ I G
Sbjct: 212 KLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGG 271
Query: 50 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 109
Y ++ EA+ LF MQ N+ PDE+ M++ LSAC+QLGA+++G WIH+YIE++ L+
Sbjct: 272 YVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLN 331
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
V L ALIDMYAK GKI KA+QVF+ + ++ +TWT +I+GLALHG A+ FS M
Sbjct: 332 VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMID 391
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
V P+E+TF+ +LSACCH GLVE GR+YF+ M S++ + PK++ Y CM+DLLGRAG L+
Sbjct: 392 NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLE 451
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 289
EAE+L++ MP EA+A +WG+L A I+G+V +GE A L++++PH+SG Y +L+N+Y
Sbjct: 452 EAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYG 511
Query: 290 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 349
W E+GK RK+MR GV+K PGCS IEV+ V+EF+ D SHP +++Y+ L ++
Sbjct: 512 EAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTR 571
Query: 350 QMKFAE 355
Q++ E
Sbjct: 572 QLELVE 577
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 151/263 (57%), Gaps = 18/263 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GDL+ AR +F+ ++++SW ++I GY + EA+ +R M+VE +K
Sbjct: 118 NAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIK 177
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M+ +S+CAQL ++LG H YIE+ GL VPL NAL+DMY K G + A ++
Sbjct: 178 PDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKL 237
Query: 133 FENMKNKSVITWTT----------------MIAGLALHGLGREALDMFSRMERARVKPNE 176
F++M NK++++WTT MI G G+EAL +F+ M+ + P+E
Sbjct: 238 FDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 297
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+T ++ LSAC +G +++G + ++ ++ + + +ID+ + G + +A ++ +
Sbjct: 298 VTMVSCLSACSQLGALDVGIWIHHYIE-KHELSLNVALGTALIDMYAKCGKITKAIQVFQ 356
Query: 237 RMPFEANAAIWGSLLAASNIYGD 259
+P N+ W ++++ ++G+
Sbjct: 357 ELPGR-NSLTWTAIISGLALHGN 378
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRR-MQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
N SW I G+ + P EA+ L++R +Q + KPD ACA+L + +G I
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
++ G ++ + ++NA+I + G + A ++F+ + +++W +MI G G
Sbjct: 102 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 161
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL+ + M+ +KP+E+T I ++S+C + ++LGR ++ G++ +
Sbjct: 162 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVPLANA 220
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G L+ A KL M + + W ++L
Sbjct: 221 LMDMYMKCGNLESARKLFDSMTNKTMVS-WTTML 253
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 161/340 (47%), Positives = 239/340 (70%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYA+ G L+ AR + + EK+V+ W +I+G Q Q EA+ LF MQ+ +
Sbjct: 328 WTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTI 387
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD++ M+ LSAC+QLGA+++G WIH+YIE++ L+ V L AL+DMYAK G I +ALQ
Sbjct: 388 EPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQ 447
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + ++ +TWT +I GLALHG ++AL FS+M + P+EITF+ +LSACCH GL
Sbjct: 448 VFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGL 507
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ M S++ + PK++ Y CM+DLLGRAG+L+EAE+L++ MP A+AA+ G+L
Sbjct: 508 VEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALF 567
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +YG+V++GE L++++P +SGNY +L+++Y+ W E+ RK+M D GV+K
Sbjct: 568 FACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEK 627
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PGCS +E++ VHEFV D SHP + +Y+ L + Q+
Sbjct: 628 TPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQL 667
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 146/280 (52%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + G+L+ A +F +++++W ++I G + EAI +++ M+ E V+
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI M+ +S+C+Q+ + LG+ H YI+++GL +PL NAL+DMY K G++ A +
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVL 316
Query: 133 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 161
F+NM K++++WTTM+ G A G G+EAL
Sbjct: 317 FDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEAL 376
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ ++P+++T + LSAC +G +++G + ++ R+ + + ++D+
Sbjct: 377 ALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE-RHKLSIDVALGTALVDM 435
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + A ++ +P + N W +++ ++G+ +
Sbjct: 436 YAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQ 474
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAAL 82
+L+ + + E NV SW I GY + L++RM + +KPD L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
C + LG + ++ ++G + ++NA I M G++ A VF + + ++
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
TW +MI G GL EA+ ++ ME +V+PNEIT I ++S+C V + LG+ + +
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
K +G+E I ++D+ + G L A L M
Sbjct: 286 K-EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 239/360 (66%), Gaps = 3/360 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +V G+ G ++ AR F M E++ +SWT +I GY +++ EA+ LFR MQ +
Sbjct: 200 WTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKI 259
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACAQLGA+ELGEWI YI++ + + NALIDMY K G + AL
Sbjct: 260 KPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALS 319
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + + TWT M+ GLA++G G EAL+MFS+M +A V P+E+T++ +LSAC H G+
Sbjct: 320 IFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGM 379
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+++F M +R+GIEP I YGCM+DLLG+AG+L+EA ++++ MP + N+ +WG+LL
Sbjct: 380 VDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALL 439
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ D E+ E A++ +++LEP+N Y + NIYA +W++ ++R+VM D G+KK
Sbjct: 440 GACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKK 499
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE---FSGVLESD 368
PGCS IE++ VHEFVAGD SHP +Y L K+ +K A + N F + E D
Sbjct: 500 TPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEED 559
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 26/245 (10%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD+ AR LF+ + E +V SW + GY+++ P ++L+ M NVKPD
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ A++LG +H ++ +YGL++ V +NALI+MY+ G I A +F+ V+
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
TW MI+G R+K + I++ AI++ + G V+ R+YF+ M
Sbjct: 182 TWNAMISGY------------------NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKM 223
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGD 259
R + + MID R +EA L R M + + S+L A G
Sbjct: 224 PERDHV-----SWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGA 278
Query: 260 VELGE 264
+ELGE
Sbjct: 279 LELGE 283
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 246/357 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G +AR +FE M +++V+SW+ +I GY Q + E + LF+ M E +
Sbjct: 205 WNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKI 264
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E ++ ALSACA LGA+E G+WI Y+E+ + V L ALIDMY+K G + +AL+
Sbjct: 265 EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF MK K+V+ W+ MI GLA++G G++AL++FS+ME VKPNE+TFI IL+AC H L
Sbjct: 325 VFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +F+ M S YG++P + CM+DL GRAG L +A+ +++ MPF+ N+AIWG+LL
Sbjct: 385 VDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALL 444
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+GD ELGE + L++L+P++ G Y +LSNIYA GRW+ ++R++MR+ V K
Sbjct: 445 NACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSK 504
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS+I++ +HEFVAGD+SHP + +Y L +++ ++K A + + +L+ D
Sbjct: 505 TPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMD 561
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SR+L A + G + AR LF + + ++ TLI YA P +A+
Sbjct: 68 FVASRILS------FAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVV 121
Query: 62 LFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+ M +V PD L AC+++ ++ LGE IH+++ + G ++ V ++N L+ MY
Sbjct: 122 FYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMY 181
Query: 121 A-------------------------------KSGKIGKALQVFENMKNKSVITWTTMIA 149
A K G A ++FE M ++ V++W+ MI
Sbjct: 182 ASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMIN 241
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G +E L +F M +++PNE + LSAC H+G +E G+ M+ R +
Sbjct: 242 GYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYME-RKNVR 300
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +ID+ + G ++ A ++ +M E N W +++ I G
Sbjct: 301 LTVRLGTALIDMYSKCGSVERALEVFHKMK-EKNVLAWSAMINGLAING 348
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL + ++ Y+K G + A +F M EKNV++W+ +I G A Q +A+ LF +
Sbjct: 300 RLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQ 359
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+++ VKP+E+ + L+AC+ V+ G + H+ YGL + ++D+Y ++G
Sbjct: 360 MEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAG 419
Query: 125 KIGKALQVFENM--KNKSVITWTTMIAGLALHG 155
+ +A V ++M K S I W ++ +HG
Sbjct: 420 MLDQAQTVIKSMPFKPNSAI-WGALLNACRIHG 451
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 236/341 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G+A +GD+ A+ LF+ E+++ISW+++IA YA+ Q NEA+ LF MQ+ NV
Sbjct: 205 WNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANV 264
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD++ M++ LSAC +GA+ +G+ IH IE+ + + L +L+DMYAK G I +L+
Sbjct: 265 LPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLR 324
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M N+ V W+ MI GLA HG G ALD FS+M +KPN++TFI +LSAC H+GL
Sbjct: 325 VFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGL 384
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M Y + PKIE YGC++D+LGRAG LQEA +L++ MPF +A +W +LL
Sbjct: 385 VDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A IY +VE+ E A +L++LEPH GNY +LSNIY+ W++ +R++M+++ ++K
Sbjct: 445 GACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQK 504
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S IEV VHEFVAGD SHP+ ++ ++L +I ++K
Sbjct: 505 VPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLK 545
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 73/335 (21%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F L++LL + + + DL AR++F+ + + W T+I Y P E+++
Sbjct: 36 FVLAKLLRRLF-----ACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMS 90
Query: 62 LFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LF +M+ + P D ++ + AC +L G+ +H + + GL + + + ALI+MY
Sbjct: 91 LFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMY 150
Query: 121 AK-------------------------------SGKIGKALQVFENMKNKSVITWTTMIA 149
AK G+I A +F+ M + +++W TMI
Sbjct: 151 AKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIH 210
Query: 150 GLALHG-------------------------------LGREALDMFSRMERARVKPNEIT 178
G A G EAL +F M+ A V P+++T
Sbjct: 211 GHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVT 270
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+++LSAC VG + +G+ ++ R IE ++ ++D+ + G + + ++ M
Sbjct: 271 MVSVLSACGDVGALGMGKMIHECIE-RNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGM 329
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ W +++ +G GE AL H K+
Sbjct: 330 N-NRDVFAWSAMIMGLANHG---FGELALDHFSKM 360
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K ++V YAK GD++N+ +F M ++V +W+ +I G A A+ F +M E
Sbjct: 304 KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++KP+++ + LSAC+ +G V+ G + + + Y ++ + ++D+ ++G++ +
Sbjct: 364 DIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQE 423
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A+++ ++M I W ++ ++
Sbjct: 424 AMELIKSMPFAPDAIVWRALLGACRIY 450
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 240/333 (72%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++G+ ++G + ARA+FE M +K + SWT +++GYA++ +A+ FRRMQ+ +
Sbjct: 186 WNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 245
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L ACAQLGA+ELG+WIH Y ++ G + + NALI+MYAK G I + +
Sbjct: 246 EPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRR 305
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + VI+W+TMI GLA HG EA+++F M++A+++PN ITF+ +LSAC H GL
Sbjct: 306 LFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGL 365
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RYF MK Y IEP +E YGC+++LLG +G L +A +L+++MP + ++AIWGSLL
Sbjct: 366 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLL 425
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ + ++E+ A++HL++LEP ++GNY +LSN+YA LG+W+ ++RK+MR +KK
Sbjct: 426 SSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 485
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV V EF +GD S P +Y++L
Sbjct: 486 TPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVL 518
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVEN-VKPDEIAMLAAL 82
A LF+ + + N + +I Y AIT++++M EN + PD+ +
Sbjct: 65 ANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVV 124
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------------------- 123
+CA L +LG+ +H ++ ++G + + N+L++MY K
Sbjct: 125 KSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAV 184
Query: 124 ------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
G++ +A +FE M++K++ +WT +++G A G +AL+ F RM+
Sbjct: 185 SWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG 244
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
++P+EI+ +++L AC +G +ELG ++ + + G I +I++ + G + E
Sbjct: 245 IEPDEISLVSVLPACAQLGALELG-KWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEG 303
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYG 258
+L +M E + W +++ +G
Sbjct: 304 RRLFDQMN-ERDVISWSTMIVGLANHG 329
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 235/343 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +V G+ +G + AR F+ M E++ +SWT +I GY Q+++ E ++LFR MQ N+
Sbjct: 289 WTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANI 348
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACA LGA+ELGEWI YI++ + + NALIDMY G + KA++
Sbjct: 349 KPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIR 408
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++ I+WT +I GLA++G G EALDMFS+M +A + P+E+T I +L AC H G+
Sbjct: 409 IFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGM 468
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+++F M +++GIEP + YGCM+DLLGRAG+L+EA ++++ MP + N+ +WGSLL
Sbjct: 469 VDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLL 528
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ D E+ E A Q +++LEP N Y +L NIYA RW + ++RK+M D G+KK
Sbjct: 529 GACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKK 588
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS IE++ VHEFVAGD HP +Y L +++ +KFA
Sbjct: 589 TPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFA 631
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 150/285 (52%), Gaps = 39/285 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ G+++ AR +F+ ++ +V++W +I+GY + Q +E++ LF M+ V
Sbjct: 158 NALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVL 217
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P I +++ LSAC++L + +G+ +H Y++ + + L NALIDMYA G + AL +
Sbjct: 218 PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGI 277
Query: 133 FENMKNKSVITWTTMIAG---LALHGLGR----------------------------EAL 161
F+NMK++ VI+WT ++ G L GL R E L
Sbjct: 278 FDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVL 337
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMI 219
+F M+ A +KP+E T ++IL+AC H+G +ELG + E KI+ + +I
Sbjct: 338 SLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSFVGNALI 394
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL--AASNIYGDVEL 262
D+ G +++A ++ MP + W +++ A N YG+ L
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKIS-WTAVIFGLAINGYGEEAL 438
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 5/290 (1%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 80
++GD+ AR +F+ M N W +I GY+++ PN A++++ M V PDE
Sbjct: 65 ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
L + AV+ G +H++I + G ++ V + NALI +Y+ SG++ A VF+
Sbjct: 125 LLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
V+TW MI+G E++ +F MER RV P+ IT +++LSAC + + +G+R
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
+K IEP +ID+ G + A + M + W +++ G V
Sbjct: 245 YVKD-LKIEPVRVLENALIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQV 302
Query: 261 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + K+ + ++ + + Y + R+ E + + M+ +K
Sbjct: 303 GL---ARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 7/179 (3%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDMYAKSGKIGKALQVFENM 136
L+ + C + ++ IH+ GL N IVP + G + A VF+ M
Sbjct: 23 LSLIKTCKSMAQLK---QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTM 79
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+ W MI G + G A+ M+ M V P+E T+ +L V+ GR
Sbjct: 80 PGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGR 139
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ + + G + +I L +G + A + R + + W +++ N
Sbjct: 140 ELHDHI-VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS-KGDVVTWNVMISGYN 196
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/348 (47%), Positives = 242/348 (69%), Gaps = 3/348 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ G+A++G + +AR LF+ M E++V W L+AGY Q Q EAI LF MQ V
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKV 352
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+EI M+ LSAC+QLGA+E+G W+H+YI+++ L+ V L +L+DMYAK G I KA+
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + ++ +TWT+MI GLA HG EA++ F RM ++P+EITFI +LSACCH GL
Sbjct: 413 VFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR++F++M ++Y +E K++ Y CMIDLLGRAG+L EAE+L+ MP + +A +WG+L
Sbjct: 473 VEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALF 532
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K+R +MR +GV+K
Sbjct: 533 FACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 592
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+PGCS IE++ VHEF+ D SH D + +Y L +I QM+ H+ N
Sbjct: 593 VPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMR---HIAN 637
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 150/284 (52%), Gaps = 35/284 (12%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLA 80
G + AR LF+ ++V+SW TLI GY + P EA+ LF R+ + V+PDE+ ++
Sbjct: 170 GPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIG 229
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
A+S CAQ+G +ELG+ +H +++ G+ V L NA++DMY K G + A VFE + N++
Sbjct: 230 AVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRT 289
Query: 141 VITWTTMIAGLALHGL-------------------------------GREALDMFSRMER 169
++WTTMI G A G+ G+EA+ +F M++
Sbjct: 290 AVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQK 349
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
++V PNEIT + +LSAC +G +E+G + + R+ + + ++D+ + G ++
Sbjct: 350 SKVDPNEITMVNLLSACSQLGALEMGMWVHHYI-DRHKLHLSVALGTSLVDMYAKCGNIK 408
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+A + +P + NA W S++ +G + Q +I L
Sbjct: 409 KAICVFNEIPVQ-NALTWTSMICGLANHGHADEAIEYFQRMIDL 451
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ +PD + + ACA+L G + ++++ G + V + NA + ++ G + A
Sbjct: 116 SARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFA 175
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACC 187
++F+ + V++W T+I G GL REAL++F R+ + V+P+E+T I +S C
Sbjct: 176 RRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCA 235
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+G +ELG+R + ++ G+ + ++D+ + G L+ A + R+ A W
Sbjct: 236 QMGDLELGKRLHEFVDNK-GVRCTVRLMNAVMDMYVKCGSLELANSVFERIS-NRTAVSW 293
Query: 248 GSLLAASNIYGDVE 261
+++ G +E
Sbjct: 294 TTMIVGHARLGMME 307
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 243/359 (67%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YA G +A LFELM E+N+++W ++I GYA +PNEA+TLFR M + V+
Sbjct: 179 NTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVE 238
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ LSACA+LGA+ LG H Y+ + GL+ + NAL+D+YAK G I +A +V
Sbjct: 239 PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKV 298
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ KSV++WT++I GLA++G G+EAL++F +ER + P+EITF+ +L AC H G+V
Sbjct: 299 FDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMV 358
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK YGI PKIE YGCM+DLLGRAG +++A + ++ MP + NA +W +LL
Sbjct: 359 DEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLG 418
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G + LGE A L++LEP +SG+Y +LSN+YA RW++ K+R+ M GVKK
Sbjct: 419 ACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKT 478
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
PG S +E+ R+HEFV GD SHP + +Y L +I +K + H+ N + + E +
Sbjct: 479 PGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEE 537
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 136/250 (54%), Gaps = 5/250 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ A +F + N+ +W T+I GYA+ + P A+ L+R+M V ++PD L A
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
A+L V GE +H+ + G ++V + N L+ MYA G A ++FE M ++++TW
Sbjct: 150 IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 209
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++I G AL+G EAL +F M V+P+ T +++LSAC +G + LGRR ++
Sbjct: 210 NSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRA-HVYMV 268
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+ G++ + ++DL + G +++A K+ M E + W SL+ + G G+
Sbjct: 269 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSLIVGLAVNG---FGK 324
Query: 265 CALQHLIKLE 274
AL+ +LE
Sbjct: 325 EALELFKELE 334
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 160/350 (45%), Positives = 243/350 (69%), Gaps = 1/350 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
W TM+ GYAKVGD + AR +F++M +++ +W LI+ Y Q +P EA+ +FR +Q+ +N
Sbjct: 301 WTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKN 360
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP+E+ + + L+ACAQLGA++LG WIH YI++ G+ + +LIDMY+K G + KAL
Sbjct: 361 TKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKAL 420
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +++ + V W+ MIAGLA+HG GR A+D+FS+M+ +VKPN +TF +L AC H G
Sbjct: 421 EVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSG 480
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR +FN M+ YG+ P + Y CM+D+LGRAG L+EA +L+ +MP +A++WG+L
Sbjct: 481 LVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGAL 540
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A IYG+VEL E A L++ + +N G Y +LSNIYA G+W+ ++R+ M+ G++
Sbjct: 541 LGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLE 600
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
K PGCS IEV+ +HEF+ GD SHP +Y L +I ++K ++ +E
Sbjct: 601 KEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDE 650
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 157/278 (56%), Gaps = 34/278 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+ +GDL++A +F + EK+++SW ++I+G+ Q P EA+ LF+RM++EN +
Sbjct: 170 NSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENAR 229
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + M+ LSACA+ +E G W +YIE+ G++ + L+NA++DMY K G + A ++
Sbjct: 230 PNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRL 289
Query: 133 FENMKNKSVITWTTMIAGLA-------------------------------LHGLGREAL 161
F+ M+ K +++WTTMI G A +G +EAL
Sbjct: 290 FDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEAL 349
Query: 162 DMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F ++ + KPNE+T + L+AC +G ++LG + ++ + GI+ +ID
Sbjct: 350 AIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKKQGIKLNFHITTSLID 408
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G+L++A ++ + + +W +++A ++G
Sbjct: 409 MYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHG 445
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALS 83
L+ A +F+ + N+ +W TLI +A +P + + +F +M E+ + P+ +
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A ++ ++ G+ IH + + + + ++N+LI Y+ G + A VF + K +++
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +MI+G G EAL +F RM+ +PN +T + +LSAC +E GR + ++
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
R GI+ + M+D+ + G L++A +L +M E + W +++ GD +
Sbjct: 260 -RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTMIDGYAKVGDYD 315
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
+L + +++ Y+K G L A +F + ++V W+ +IAG A AI LF +
Sbjct: 397 KLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSK 456
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNN---ALIDMYA 121
MQ VKP+ + L AC+ G V+ G N + YG +VP + ++D+
Sbjct: 457 MQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYG---VVPGSKHYACMVDILG 513
Query: 122 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A+++ E M S W ++ ++G
Sbjct: 514 RAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG 548
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 162/350 (46%), Positives = 240/350 (68%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G+L AR LF+ M ++V++W+ +I+GY Q DQ EA+ LF MQ+ V+P+++ M
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTM 324
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ LSACA LGA+E G+W+H+YI + L+ + L AL+D YAK G I A++ FE+M
Sbjct: 325 VSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPV 384
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ TWT +I G+A +G GREAL++FS M +A ++P ++TFI +L AC H LVE GRR+
Sbjct: 385 KNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRH 444
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M YGI+P+ E YGC++DLLGRAG + EA + +R MP E NA IW +LL++ ++
Sbjct: 445 FDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHK 504
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+GE AL+ ++ L P +SG+Y +LSNIYA +G+W + IRK M+D G++K PGCS I
Sbjct: 505 NVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLI 564
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
E+ V EF A D+ HP +YQ + ++ ++K A ++ N LE D
Sbjct: 565 ELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVD 614
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 139/239 (58%), Gaps = 2/239 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA D+ A+ LF+ + E V+ W +I Y + E + +F+ M V
Sbjct: 158 SSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVA 217
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DEI +++ ++AC ++G +LG+W+ Y+++ GL L ALIDMYAK G++GKA ++
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRL 277
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+++ V+ W+ MI+G REAL +FS M+ A V+PN++T +++LSAC +G +
Sbjct: 278 FDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGAL 337
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + ++ R + I ++D + G + +A + MP + N+ W +L+
Sbjct: 338 ETGKWVHSYIR-RKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 394
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 19/299 (6%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVIS--WTTLIAGYAQMDQPNEAITLFRRM-Q 67
F + + A A L A +LF L + + + L+ P +A+ LF M
Sbjct: 52 FHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLD 111
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
V +V PD+ + AL +C+++ +++G I Y + GL + ++LI MYA +
Sbjct: 112 VASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVA 171
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A +F+ ++ V+ W +I +G E ++MF M V +EIT +++++AC
Sbjct: 172 AAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACG 231
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+G +LG+ + + G+ +ID+ + G L +A +L M + W
Sbjct: 232 RIGDAKLGKWVAEYVDEK-GLVRNRNLMTALIDMYAKCGELGKARRLFDGMQ-SRDVVAW 289
Query: 248 GSLLAASNIYGDVELGEC-------ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
++ I G + +C + L ++EP++ ++LS A+LG E+GK
Sbjct: 290 SAM-----ISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSAC-AVLGAL-ETGK 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G +++A FE M KN +WT LI G A + EA+ LF M+ +++
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIE 419
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P ++ + L AC+ VE G + + Q YG+ ++D+ ++G I +A Q
Sbjct: 420 PTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQ 479
Query: 132 VFENMK-NKSVITWTTMIAGLALHG---LGREAL 161
M + + W +++ A+H +G EAL
Sbjct: 480 FIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 233/344 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ YA+ G + +ARALF+ M +N +SW+ ++ GY Q EA+ LF RMQ + V
Sbjct: 280 FNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGV 339
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ ++ L+ACAQLG +E G+W+H Y++ + V L AL+DMYAK G++ A++
Sbjct: 340 RPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAME 399
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ MK K+V+ WTTMI GLA+HG G EAL++FS+MER VKP++I FI L AC H GL
Sbjct: 400 VFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGL 459
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F+ M +YGI+PKIE YGCM+DLL R G L EA +++ +MP + +A IWG+L+
Sbjct: 460 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALM 519
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VEL E ++H I+LEP SG Y +L NIYA GR + +IR +MR+ GV K
Sbjct: 520 AGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDK 579
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PGCS +E+ +H+F+ GD SHP + + +I+ +++ E
Sbjct: 580 TPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEE 623
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 232/349 (66%), Gaps = 1/349 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN ++ GY K L A+ LF LM + +N ++W T+I+ Y Q + AI++F++MQ EN
Sbjct: 141 WNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN 200
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP E+ M++ LSACA LGA+++GEWIH YI L V L NALIDMY K G + A+
Sbjct: 201 VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAI 260
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K++ W ++I GL ++G G EA+ F ME+ +KP+ +TF+ ILS C H G
Sbjct: 261 DVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 320
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ G+RYF+ M YG+EP +E YGCM+DLLGRAGYL+EA +L+R MP + N+ + GSL
Sbjct: 321 LLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSL 380
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ D +LGE Q L++L+P + GNY LSN+YA L RW++ RK+M GV
Sbjct: 381 LRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVH 440
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
K PGCS IEV+ VHEFVAGDTSHP F ++ L +I ++K H+ N
Sbjct: 441 KTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPN 489
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P + + L +CA G +LGE H I + G + L L+D YAK G + A
Sbjct: 5 DVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCA 64
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF M + V+ MI+ L+ HG EA ++F M + N ++ ++++ C +
Sbjct: 65 KRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKL 120
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + R F+ + + + +ID ++ L A++L M N+ W +
Sbjct: 121 GDINSARLMFDCNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNT 175
Query: 250 LLAA 253
+++A
Sbjct: 176 MISA 179
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 237/336 (70%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV+GYA G+L AR LFE ++V+ WT +I GY Q ++ +EA+ LFR MQ+ V
Sbjct: 307 WTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKV 366
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ +++ L+ CAQ GA+E G+WIH +I++ + + ALI+MYAK G I KAL+
Sbjct: 367 KPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALE 426
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F ++ K +WT++I GLA++G +AL++FS+M++A V+P++ITFI +LSAC H GL
Sbjct: 427 IFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGL 486
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA---AIWG 248
VE GR++FN M+ Y I+PK+E YGC++DLLGRAG L EAE+L++++P E A ++G
Sbjct: 487 VEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYG 546
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLL+A IYG+VE+GE + L+K E +S + +L+NIYA RW + K+R+ M+D+G
Sbjct: 547 SLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLG 606
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
VKK PGCS IEV +HEF +G SHP+ +Y +L
Sbjct: 607 VKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYML 642
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 145/274 (52%), Gaps = 37/274 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N+++ YA++ + + LF+ M +++VISW +I+GY + + +AI +F RMQ E+ +
Sbjct: 176 NSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGL 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE +++ LSAC L +ELG+ IH+Y+ T + + NAL+DMY K G + A
Sbjct: 236 MPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPI-IGNALLDMYCKCGCLSIARA 294
Query: 132 VFENMKNKSVITWTTMIAGLALHG-----------------------------LGR--EA 160
VFE M +K+VI WTTM++G A G R EA
Sbjct: 295 VFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEA 354
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMI 219
+ +F M+ +VKP++ +++L+ C G +E G+ I ++R I+ + +I
Sbjct: 355 VALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGT--ALI 412
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G++++A ++ + + A+ W S++
Sbjct: 413 EMYAKCGFIEKALEIFYGLRVKDTAS-WTSIICG 445
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 23/363 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G+LN A +F+ + ++ + +I +A+ + LF +++ + + PD
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
A LG V E + + + GL + N+LIDMYA+ +F+ M ++ VI
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204
Query: 143 TWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+W MI+G +A+++F RM E + + P+E T ++ LSAC + +ELG++ +
Sbjct: 205 SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY 264
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ P I ++D+ + G L A + MP N W ++++ G++E
Sbjct: 265 VRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMP-SKNVICWTTMVSGYANCGELE 321
Query: 262 LGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNES------GKIRKVMRD--MGVKKM 312
+ L + P + + + N Y R++E+ +IRKV D + V +
Sbjct: 322 ----EARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLL 377
Query: 313 PGCSY---IEVSKRVHEFVAGDTSHPDFDRLY-QILCKINGQMKFAEHLQNEFSGVLESD 368
GC+ IE K +HEF+ D + D + L ++ + F E F G+ D
Sbjct: 378 TGCAQTGAIEQGKWIHEFI--DENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKD 435
Query: 369 VAS 371
AS
Sbjct: 436 TAS 438
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 233/344 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ YA+ G + +ARALF+ M +N +SW+ ++ GY Q EA+ LF RMQ + V
Sbjct: 280 FNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGV 339
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ ++ L+ACAQLG +E G+W+H Y++ + V L AL+DMYAK G++ A++
Sbjct: 340 RPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAME 399
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ MK K+V+ WTTMI GLA+HG G EAL++FS+MER VKP++I FI L AC H GL
Sbjct: 400 VFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGL 459
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F+ M +YGI+PKIE YGCM+DLL R G L EA +++ +MP + +A IWG+L+
Sbjct: 460 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALM 519
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VEL E ++H I+LEP SG Y +L NIYA GR + +IR +MR+ GV K
Sbjct: 520 AGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDK 579
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PGCS +E+ +H+F+ GD SHP + + +I+ +++ E
Sbjct: 580 TPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEE 623
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 155/324 (47%), Positives = 232/324 (71%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++GYA++G + A+ LF LM +K ++SWT +I+GY + EA+ FR MQ+ +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L +CA LG++ELG+WIH Y E+ GL + NALI+MY+K G + +A+Q
Sbjct: 238 EPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQ 297
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE K K VI+W+TMI+G A HG A + F M+RA+VKPN ITF+ +LSAC HVGL
Sbjct: 298 LFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGL 357
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G +YF++M+ Y IEPKIE YGC+ID+L RAG L+ A ++ + MP + ++ IWGSLL
Sbjct: 358 WQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLL 417
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ G++++ A+ HL+++EP + GNY +L+NIYA LG+W + ++RK++R +KK
Sbjct: 418 SSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKK 477
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHP 335
PGCS IEV+ V EFVAGD S P
Sbjct: 478 TPGCSLIEVNNIVQEFVAGDNSKP 501
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-P 73
MV K+GD++ A LF ++ NV + ++I Y + I +++++ + ++ P
Sbjct: 48 MVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFP 107
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM-------------- 119
D +CA LG+ LG+ +H ++ ++G V NALIDM
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 120 -----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
YA+ G++ KA +F M +K++++WT MI+G G EA+D
Sbjct: 168 DEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
F M+ A ++P+EI+ I++L +C H+G +ELG ++ ++ R G+ + +I++
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAHLGSLELG-KWIHMYAERRGLLKQTGVCNALIEMY 286
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-----KLEPHN 277
+ G L +A +L + + + W ++++ +G+ A + I K++P+
Sbjct: 287 SKCGMLSQAIQLFEQTKGK-DVISWSTMISGYAYHGNAHR---AFETFIEMQRAKVKPNG 342
Query: 278 SGNYAILSNIYAILGRWNESGKIRKVMR 305
+LS + G W + K +MR
Sbjct: 343 ITFLGLLSACSHV-GLWQQGLKYFDMMR 369
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 114/247 (46%), Gaps = 19/247 (7%)
Query: 95 EW--IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
EW IH I +GL+ + ++D+ K G + A ++F + N +V + ++I
Sbjct: 25 EWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 153 LHGLGREALDMFSRMERARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
+ L + + ++ ++ R ++ P+ TF + +C +G LG++ + ++G
Sbjct: 85 HNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHL-YKFGPRFH 143
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 271
+ +ID+ + L +A K+ M E + W SLL+ G ++ + L HL+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMS-ERDVISWNSLLSGYARLGQMKKAK-GLFHLM 201
Query: 272 KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IEV 320
++ A++S Y +G + E+ + M+ G++ +P C++ +E+
Sbjct: 202 -IDKTIVSWTAMISG-YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLEL 259
Query: 321 SKRVHEF 327
K +H +
Sbjct: 260 GKWIHMY 266
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 243/359 (67%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YA G +A LFELM E+N+++W ++I GYA +PNEA+TLFR M + V+
Sbjct: 34 NTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVE 93
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ LSACA+LGA+ LG H Y+ + GL+ + NAL+D+YAK G I +A +V
Sbjct: 94 PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKV 153
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ KSV++WT++I GLA++G G+EAL++F +ER + P+EITF+ +L AC H G+V
Sbjct: 154 FDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMV 213
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK YGI PKIE YGCM+DLLGRAG +++A + ++ MP + NA +W +LL
Sbjct: 214 DEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLG 273
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G + LGE A L++LEP +SG+Y +LSN+YA RW++ K+R+ M GVKK
Sbjct: 274 ACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKT 333
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
PG S +E+ R+HEFV GD SHP + +Y L +I +K + H+ N + + E +
Sbjct: 334 PGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEE 392
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A A+L V GE +H+ + G ++V + N L+ MYA G A ++FE M ++++T
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++I G AL+G EAL +F M V+P+ T +++LSAC +G + LGRR M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM- 122
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
+ G++ + ++DL + G +++A K+ M E + W SL+ + G G
Sbjct: 123 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSLIVGLAVNG---FG 178
Query: 264 ECALQHLIKLE 274
+ AL+ +LE
Sbjct: 179 KEALELFKELE 189
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 238/347 (68%), Gaps = 6/347 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ YA+ G L +ARALF+ M +N +SW+ ++ GY Q EA+ +F RMQ E+V
Sbjct: 146 FNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDV 205
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ ++ L+ACAQ GA+E G+W+H Y++ +G+ + AL+DMY+K G++ A+
Sbjct: 206 RPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMD 265
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ K+V+ WTTMI GLA+HG G EA+ +F++ME + ++P++I FI +L AC H GL
Sbjct: 266 VFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGL 325
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F+ M +YGI+PKIE YGCM+DLL R G+L EA++++++MP E +A IWG+L+
Sbjct: 326 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALM 385
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VE E +H I LEP SG Y +LSNIYA GR + +IR +MR+ GV K
Sbjct: 386 AGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDK 445
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK---INGQMKFAE 355
PGCS +EV+ +H+F+ GD SHP R+ IL K I+ +++ E
Sbjct: 446 TPGCSTVEVNGVIHQFIVGDLSHP---RIKDILSKWYEIDTRIRLEE 489
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F +V Y+K G++ A +FE M KNV++WTT+I G A + +EA+ LF +M+
Sbjct: 246 FGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSG 305
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD+IA + L AC G V+ G E + + +YG+ + ++D+ A++G + +A
Sbjct: 306 IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEA 365
Query: 130 LQVFENMK-NKSVITWTTMIAGLALH 154
++ + M + W ++AG H
Sbjct: 366 KEMIQKMPMEPDALIWGALMAGCRFH 391
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 238/346 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ G+A++G + +AR LF+ M E++V W L+AGY Q Q EAI LF MQ V
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKV 352
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+EI M+ LSAC+QLGA+E+G W+H+YI+++ L V L +L+DMYAK G I KA+
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + +K+ +TWT MI GLA HG EA++ F RM ++P+EITFI +LSACCH GL
Sbjct: 413 IFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR++F++M +Y +E K++ Y CMIDLLGRAG+L EAE+L+ MP + +A +WG+L
Sbjct: 473 VKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALF 532
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K+R +MR +GV+K
Sbjct: 533 FACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 592
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PGCS IE++ VHEF+ D SH D +Y L I QMK +L
Sbjct: 593 VPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTANL 638
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 37/295 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
N V ++ G + AR LF+ ++V+SW TLI GY + P EA+ LF R+ VE+
Sbjct: 160 NAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRL-VEDGK 218
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+PDE+ M+ A+S CAQ+G +ELG+ +H +++ G+ V L NA++DMY K G + A
Sbjct: 219 AVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELA 278
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGL-------------------------------GR 158
VFE + NK+V++WTTMI G A G+ G+
Sbjct: 279 KSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGK 338
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
EA+ +F M+ ++V PNEIT + +LSAC +G +E+G + + R+ + + +
Sbjct: 339 EAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYI-DRHQLYLSVALGTSL 397
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+D+ + G +++A + + +P + NA W +++ +G + Q +I L
Sbjct: 398 VDMYAKCGNIKKAICIFKEIP-DKNALTWTAMICGLANHGHADEAIEYFQRMIDL 451
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 58 EAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
+ L+R + + +PD + L ACA+L G + ++++ G + V + NA
Sbjct: 103 HCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAG 162
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKP 174
+ ++ SG + A ++F+ + V++W T+I G GL REAL++F R+ + V+P
Sbjct: 163 VHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRP 222
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+E+T I +S C +G +ELG+R + S+ G+ + ++D+ + G L+ A+ +
Sbjct: 223 DEVTMIGAVSGCAQMGDLELGKRLHEFVDSK-GVRCTVRLMNAVMDMYVKCGSLELAKSV 281
Query: 235 LRRM 238
R+
Sbjct: 282 FERI 285
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 229/340 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
TM+ Y+K+G+L+ AR+LFE M E++V+ W +I GYAQ PNE++ LFRRM V
Sbjct: 211 TTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI 270
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ +LA LSAC QLGA+E G WIH+YIE G+ V + ALIDMY+K G + A V
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +++K V+ W +MI G A+HG + AL +F M KP +ITFI ILSAC H GLV
Sbjct: 331 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLV 390
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR +F +M+ +YGIEPKIE YGCM++LLGRAG+L+EA L++ M A+ +WG+LL
Sbjct: 391 EEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG 450
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++ +++LGE + L+ + NSG Y +LSN+YA G W K+R +M++ G++K
Sbjct: 451 CCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKE 510
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS IEV +VHEFVAG+ HP +Y +L +IN +K
Sbjct: 511 HGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLK 550
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 37/271 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA +G L+ + +F E NV S++ +I + Q + A + +M V+P+
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------- 121
+ L +C+ +E G+ +H + GL + + + L+D+YA
Sbjct: 149 SSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 204
Query: 122 --------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
K G++ KA +FE MK + V+ W MI G A G+ E+L +F RM
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
A+ PNE+T +A+LSAC +G +E GR + ++++ GI+ + +ID+ + G
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCGS 323
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
L++A + R+ + + W S++ ++G
Sbjct: 324 LEDARLVFDRIR-DKDVVAWNSMIVGYAMHG 353
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + + GL LN L YA G++ ++ VF +V +++ +I L
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A +S+M V+PN TF ++L +C +E G + + + G+ +
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESG-KVLHCQAIKLGLGSDLYVRT 180
Query: 217 CMIDLLGRAGYLQEAEKLLRRMP 239
++D+ R G + A +L +MP
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMP 203
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 242/357 (67%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K ++ YAK G++ AR LF+ M ++V++W+ +I+GY Q DQ EA+ LF MQ+
Sbjct: 257 KLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA 316
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+P+++ M++ LSACA LGA+E G+W+H+Y+ + L+ L AL+D YAK G I A
Sbjct: 317 RVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDA 376
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++ FE+M K+ TWT +I G+A +G GREAL++FS M A ++P ++TFI +L AC H
Sbjct: 377 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LVE GRR+F+ M YGI+P++E YGCM+DLLGRAG + EA + +R MP E NA IW +
Sbjct: 437 CLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRA 496
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL++ ++ +V +GE AL+ +I L P +SG+Y +LSNIYA G+W ++ +RK M+D G+
Sbjct: 497 LLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
+K PGCS IE+ V EF A D+ HP+ +YQ + ++ G++K A ++ N LE
Sbjct: 557 EKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLE 613
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 141/240 (58%), Gaps = 4/240 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA GD+ AR +F+ E V+ W ++A Y + E + +F+ M V
Sbjct: 159 SSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVA 218
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DE+ +++ ++AC ++G +LG+W+ ++++ GL L AL+DMYAK G+IGKA ++
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRL 278
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+++ V+ W+ MI+G REAL +FS M+ ARV+PN++T +++LSAC +G +
Sbjct: 279 FDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGAL 338
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + + + R + + ++D + G + +A + MP + N+ W +L+
Sbjct: 339 ETGKWVHSYVRRKRLSLTTILGT--ALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 395
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 10/295 (3%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVIS--WTTLIAGYAQMDQPNEAITLFRRM-- 66
F + + A A L A +LF L + + + L+ + P +A+ LF M
Sbjct: 52 FHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLH 111
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
D+ AL +C+++ A+++G + Y + GL + ++LI MYA G +
Sbjct: 112 AASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDV 171
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VF+ + V+ W ++A +G E ++MF M V +E+T +++++AC
Sbjct: 172 AAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTAC 231
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+G +LG ++ G+ + ++D+ + G + +A +L M +
Sbjct: 232 GRIGDAKLG-KWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQ-SRDVVA 289
Query: 247 WGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
W ++++ LG + L ++EP++ ++LS A+LG E+GK
Sbjct: 290 WSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSAC-AVLGAL-ETGK 342
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/345 (46%), Positives = 235/345 (68%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K GD N AR +F+ M KNV+SW ++I+G AQ Q E++ +FR+MQ VK
Sbjct: 266 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 325
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ++A L++CA LG +ELG+W+H Y+++ + + NAL+DMYAK G I +A V
Sbjct: 326 PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWV 385
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K V ++T MI GLA+HG G +ALD+FS M + ++P+E+TF+ +L+AC HVGLV
Sbjct: 386 FQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLV 445
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR+YF M + Y + P++E YGCM+DLLGRAG + EAE+ +R MP E +A + G+LL
Sbjct: 446 EEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLG 505
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G VELGE ++ + K+EP G Y ++SNIY+ RW ++ K+RK M++ ++K
Sbjct: 506 ACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKT 565
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS IE+ +HEF GD SHP +Y++L +I +K E L
Sbjct: 566 PGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNNECL 610
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA + +AR +F+ +++++SWTT+I GY +M E + LF M EN++
Sbjct: 164 NTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQ 223
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + ++ LS+CA+LG + LG +H YI +N V + NAL+DMY K G A +
Sbjct: 224 ADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARK 283
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K+V++W +MI+GLA G +E+L MF +M+R VKP+++T +A+L++C ++G+
Sbjct: 284 VFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGV 343
Query: 192 VELGR 196
+ELG+
Sbjct: 344 LELGK 348
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEIAMLAAL 82
D A +L + N+ + +I G A + + E + ++++M + + PD + L
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA+ AV GE +H + GL + V ++N L+ MYA I A +VF+ + ++
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 192
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+WTTMI G G RE + +F M ++ + +T + +LS+C +G + LGR+ +
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI 252
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + ++D+ + G A K+ + MP + N W S+++
Sbjct: 253 IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISG 302
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/345 (46%), Positives = 235/345 (68%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K GD N AR +F+ M KNV+SW ++I+G AQ Q E++ +FR+MQ VK
Sbjct: 244 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ++A L++CA LG +ELG+W+H Y+++ + + NAL+DMYAK G I +A V
Sbjct: 304 PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K V ++T MI GLA+HG G +ALD+FS M + ++P+E+TF+ +L+AC HVGLV
Sbjct: 364 FQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR+YF M + Y + P++E YGCM+DLLGRAG + EAE+ +R MP E +A + G+LL
Sbjct: 424 EEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLG 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G VELGE ++ + K+EP G Y ++SNIY+ RW ++ K+RK M++ ++K
Sbjct: 484 ACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKT 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS IE+ +HEF GD SHP +Y++L +I +K E L
Sbjct: 544 PGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNNECL 588
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 36/184 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA + +AR +F+ +++++SWTT+I GY +M E + L+
Sbjct: 179 NTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLY--------- 229
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
I +N V + NAL+DMY K G A +V
Sbjct: 230 ---------------------------IIRNSNVNLDVFVGNALVDMYLKCGDANFARKV 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+V++W +MI+GLA G +E+L MF +M+R VKP+++T +A+L++C ++G++
Sbjct: 263 FQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVL 322
Query: 193 ELGR 196
ELG+
Sbjct: 323 ELGK 326
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEIAMLAAL 82
D A +L + N+ + +I G A + + E + ++++M + + PD + L
Sbjct: 88 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 147
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA+ AV GE +H + GL + V ++N L+ MYA I A +VF+ + ++
Sbjct: 148 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 207
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+WTTMI G G RE + ++ + + V + A++ G R+ F M
Sbjct: 208 SWTTMIQGYVKMGFAREGVGLYI-IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEM 266
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ + + MI L + G +E+ + R+M
Sbjct: 267 PVK-----NVVSWNSMISGLAQKGQFKESLYMFRKM 297
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 168/343 (48%), Positives = 230/343 (67%), Gaps = 2/343 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNV--ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
YAK G + AR LF+ MTE+N ++W T+I+ Y Q + AI++F++MQ ENVKP E+
Sbjct: 75 YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
M++ LSACA LGA+++GEWIH YI L V L NALIDMY K G + A+ VF +
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 194
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K++ W ++I GL ++G G EA+ F ME+ +KP+ +TF+ ILS C H GL+ G+
Sbjct: 195 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 254
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
RYF+ M YG+EP +E YGCM+DLLGRAGYL+EA +L+R MP + N+ + GSLL A I
Sbjct: 255 RYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQI 314
Query: 257 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 316
+ D +LGE Q L++L+P + GNY LSN+YA L RW++ RK+M GV K PGCS
Sbjct: 315 HKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCS 374
Query: 317 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
IEV+ VHEFVAGDTSHP F ++ L +I ++K H+ N
Sbjct: 375 SIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPN 417
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ + M +V P + + L +CA G +LGE H I + G + L L+D
Sbjct: 15 LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74
Query: 120 YAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
YAK G + +A +F+NM +N + +TW TMI+ G A+ MF +M+ VKP E+
Sbjct: 75 YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
T +++LSAC H+G +++G ++++ ++ + +ID+ + G L+ A +
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYIRTKR-LKIDVVLGNALIDMYCKCGALEAAIDVFHG 193
Query: 238 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ N W S++ + G GE A+ I +E
Sbjct: 194 LS-RKNIFCWNSIIVGLGMNGR---GEEAIAAFIVME 226
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L A +F ++ KN+ W ++I G + EAI F M+ E +K
Sbjct: 172 NALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIK 231
Query: 73 PDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + + LS C+ G + G+ + + YGL V ++D+ ++G + +AL+
Sbjct: 232 PDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALE 291
Query: 132 VFENMKNK 139
+ M K
Sbjct: 292 LIRAMPMK 299
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 236/347 (68%), Gaps = 6/347 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ +A+ G + +AR+LF+ M E+N +SW+ ++ GY Q EA+ +F +MQ + V
Sbjct: 162 FNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGV 221
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ ++ L+ACAQLGA+E G+W+H Y++ + V L AL+DMYAK G++ ++
Sbjct: 222 RPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGME 281
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE MK+K+V+ WTTMI GLA+HG G ++L +FS+ME + VKP++I FI L AC H GL
Sbjct: 282 VFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGL 341
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR FN M + YGI+PKIE YGCM+DLL R G L EA ++ +MP + +A IWG+L+
Sbjct: 342 VDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALM 401
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VEL E ++H I+LEP SG Y +L NIY+ GR + +IR +MR+ GV+K
Sbjct: 402 AGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEK 461
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK---INGQMKFAE 355
PGCS +E+ +H+F+ GD SHP R+ IL K I+ +++ E
Sbjct: 462 TPGCSNVEIKGVIHQFIVGDLSHP---RIKDILTKWYEIDSRIRLEE 505
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/346 (46%), Positives = 235/346 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ G+AK G +++AR +F+ M E++V W L+ GY Q Q EA++LF MQ +V
Sbjct: 297 WTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASV 356
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDEI M+ L+AC+QLGA+E+G W+H YIE++ L V L +LIDMYAK G I KA+
Sbjct: 357 VPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIH 416
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + K+ +TWT MI GLA HG EA++ F M KP+EITFI +LSACCH GL
Sbjct: 417 IFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGL 476
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F++M+++Y +E K++ Y CMIDLLGRAG+L EAE+L+ MP E +A +WG++
Sbjct: 477 VKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIF 536
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + G++ LGE A L++++P +SG Y +L+N+YA ++ K+R +MR +GV+K
Sbjct: 537 FACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEK 596
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PGCS IE++ VHEF+ D SH D +Y L +I Q+K L
Sbjct: 597 VPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKHTADL 642
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 145/272 (53%), Gaps = 41/272 (15%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLA 80
G + +AR LF+ ++++SW TLI GY + P EA+ LF RM E+ V+PDE+ M+A
Sbjct: 174 GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIA 233
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
A+S C Q+ +ELG +H +++ G++ V L NAL+DMY K G + A VFE +++++
Sbjct: 234 AVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRT 293
Query: 141 VITWTTMIAGLALHGL-------------------------------GREALDMFSRMER 169
V++WTTMI G A GL +EAL +F M+
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 170 ARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
A V P+EIT + +L+AC +G +E+G RY + + + +ID+ + G
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTS----LIDMYAKCG 409
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+++A + + +P E NA W +++ +G
Sbjct: 410 NIEKAIHIFKEIP-EKNALTWTAMICGLANHG 440
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+PD + L ACA+L G+ ++ + GL++ V + NA + G + A
Sbjct: 120 TARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDA 179
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACC 187
++F+ + +++W T+I G G EAL++F RM E A V+P+E+T IA +S C
Sbjct: 180 RRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCG 239
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ +ELGRR + S G+ + ++D+ + G L+ A+ + R+ + W
Sbjct: 240 QMRDLELGRRLHGFVDSD-GVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVS-W 297
Query: 248 GSLLAASNIYG 258
+++ +G
Sbjct: 298 TTMIVGFAKFG 308
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 228/333 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V G+A +G ++ AR F+ + E++ +SWT +I GY +M++ EA+ LFR MQ+ NV
Sbjct: 277 WTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNV 336
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACA LGA+ELGEW+ YI++ + + NALIDMY K G +GKA +
Sbjct: 337 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKK 396
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +K TWT MI GLA++G G EAL MFS M A + P+EIT+I +L AC H G+
Sbjct: 397 VFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGM 456
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G+ +F M ++GI+P + YGCM+DLLGRAG L+EA +++ MP + N+ +WGSLL
Sbjct: 457 VEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ +V+L E A + +++LEP N Y +L NIYA RW ++RK+M + G+KK
Sbjct: 517 GACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKK 576
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS +E++ V+EFVAGD SHP +Y L
Sbjct: 577 TPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 33/265 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR +F++ V++W +++GY ++ Q ++ LF M+ V P+ + ++ LSAC++
Sbjct: 161 ARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSK 220
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L +E G+ I+ YI + + L N LIDM+A G++ +A VF+NMKN+ VI+WT++
Sbjct: 221 LKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSI 280
Query: 148 IAGLALHG---LGR----------------------------EALDMFSRMERARVKPNE 176
+ G A G L R EAL +F M+ + VKP+E
Sbjct: 281 VTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDE 340
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T ++IL+AC H+G +ELG + + I+ +ID+ + G + +A+K+ +
Sbjct: 341 FTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFK 399
Query: 237 RMPFEANAAIWGSLLAASNIYGDVE 261
M + W +++ I G E
Sbjct: 400 EM-HHKDKFTWTAMIVGLAINGHGE 423
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + AR +F+ + + + W T+I GY++++ P ++++ M N+KPD L
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ A++ G+ + N+ ++G ++ + + A I M++ + A +VF+ V+
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
TW M++G +++ +F ME+ V PN +T + +LSAC + +E G+ + +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
+E + +ID+ G + EA+ + M + W S++ G ++L
Sbjct: 235 NGGI-VERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQIDL 292
Query: 263 G 263
Sbjct: 293 A 293
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYA--KSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH++ + GL++ +I +SGK+ A QVF+ + ++ W TMI G +
Sbjct: 26 IHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRI 85
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
+ + M+ M + +KP+ TF +L ++ G+ N
Sbjct: 86 NHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLN 131
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 236/324 (72%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++G+ ++G + ARA+FE M +K + SWT +++GYA++ +A+ FRRMQ+ +
Sbjct: 186 WNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 245
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L CAQLGA+ELG+WIH Y ++ G + + NALI+MYAK G I + +
Sbjct: 246 EPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 305
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ MK + VI+W+TMI GLA HG REA+++F M++A+++P+ ITF+ +L+AC H GL
Sbjct: 306 LFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGL 365
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RYF MK Y IEP +E YGC+++LLG +G L +A +L+++MP + ++ IWGSLL
Sbjct: 366 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLL 425
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +G++++ A++HL++LEP ++GNY +LSN+YA LG+W+ ++RK+MR +KK
Sbjct: 426 SSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 485
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHP 335
PGCS IEV V EF +GD S P
Sbjct: 486 TPGCSSIEVDNMVQEFASGDDSKP 509
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F+LS+ + MV G+ A LF+ + + N + +I Y AIT
Sbjct: 40 FSLSQSSF-LVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAIT 98
Query: 62 LFRRM----QVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
++++M EN + PD+ + +CA L +LG+ +H ++ ++G + + N+L
Sbjct: 99 VYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSL 158
Query: 117 IDMYAKS-------------------------------GKIGKALQVFENMKNKSVITWT 145
++MY K G++ +A +FE M++K++ +WT
Sbjct: 159 VEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWT 218
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
+++G A G +AL+ F RM+ ++P+EI+ +++L C +G +ELG ++ +I +
Sbjct: 219 AIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELG-KWIHIYADK 277
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G I +I++ + G + + +L +M E + W +++ +G
Sbjct: 278 AGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMK-ERDVISWSTMIVGLANHG 329
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/343 (48%), Positives = 229/343 (66%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K GDL AR LF+ M E++VISW +I GY M EA+ LFR M
Sbjct: 297 KLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLAS 356
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+P EI L+ L +CA LGA++LG+WIH YI + + L+ +LID+YAK G I A
Sbjct: 357 GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAA 416
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF+ MK KS+ +W MI GLA+HG +A ++FS+M ++PNEITF+ ILSAC H
Sbjct: 417 RQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHA 476
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+LG+++F+ M Y I PK + YGCMIDLLGRAG +EAE LL+ M + + AIWGS
Sbjct: 477 GLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGS 536
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +G VELGE + L +LEP N G Y +LSNIYA G+W++ +IR + D G+
Sbjct: 537 LLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 596
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KK+PGC+ IEV VHEF+ GD HP + +Y++L +++ Q+K
Sbjct: 597 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLK 639
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 147/250 (58%), Gaps = 2/250 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++AGYA G ++ AR LF+ M K+V+SW +IAGYAQM + EA+ LF M+ NV
Sbjct: 198 FTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANV 257
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E +++ LSACAQ A++LG + ++IE GL + + L NALIDMY+K G + A +
Sbjct: 258 PPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARE 317
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++M + VI+W MI G +EAL +F M + V+P EITF++IL +C H+G
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA 377
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG+ + + +IDL + G + A ++ M ++ A+ W +++
Sbjct: 378 IDLGKWIHAYINKNFNSVSTSLSTS-LIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMI 435
Query: 252 AASNIYGDVE 261
++G +
Sbjct: 436 CGLAMHGQAD 445
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 39/282 (13%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+F LS+L+ + ++ GD++ A +LF + E N+ W ++I G + P A+
Sbjct: 61 LFALSKLIE------FSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALAL 114
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
F RM V+P+ L +CA+L + G+ IH ++ + G + V ++ +LI+MY
Sbjct: 115 VFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMY 174
Query: 121 AKSGKIG-------------------------------KALQVFENMKNKSVITWTTMIA 149
A+SG++ +A Q+F+ M K V++W MIA
Sbjct: 175 AQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIA 234
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G A G +EAL +F M +A V PNE T +++LSAC ++LG + ++ R G+
Sbjct: 235 GYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR-GLC 293
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ +ID+ + G LQ A +L M E + W ++
Sbjct: 294 SNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMI 334
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA--KSGKIGKALQVFENM 136
L LS C ++ + IH +I + GL+ + + LI+ A +SG I A+ +F ++
Sbjct: 33 LKLLSKCQ---SIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+ ++ W +MI GL++ AL F RM + V+PN TF +L +C + G+
Sbjct: 90 EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGK 149
Query: 197 R-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE---------ANAAI 246
+ + +++K G + + +I++ ++G + A+ + + F A A+
Sbjct: 150 QIHAHVLK--LGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYAL 207
Query: 247 WGSLLAASNIYGDVELGE 264
WG + A ++ ++ + +
Sbjct: 208 WGYMDRARQLFDEMPVKD 225
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GYAK+GD + AR +F M K + +W LI+ Y Q +P EA+ +F +Q+ +
Sbjct: 296 WTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKI 355
Query: 72 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE+ +++ LSACAQLGA++LG WIH YI++ G+ L ++L+DMYAK G + KAL
Sbjct: 356 AKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKAL 415
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +++ + V W+ MIAGL +HG G+ A+D+F M+ A+VKPN +TF +L AC H G
Sbjct: 416 EVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR +F+ M+ YG+ P+++ Y CM+D+LGRAG+L+EA +L+ M +A++WG+L
Sbjct: 476 LVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGAL 535
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +++ +VELGE A L+KLEP N G +LSNIYA GRW + ++RK+MRD +K
Sbjct: 536 LGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELK 595
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS IE + VHEF+ GD +HP +Y L +I ++K
Sbjct: 596 KEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLK 637
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 153/278 (55%), Gaps = 34/278 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y GDL+ A LF+ ++ K+V+SW ++I+ +AQ + P +A+ LF +M+ ENV
Sbjct: 165 NSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVM 224
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + M+ LSACA+ +E G W+ +YIE+ G+ + L NA++DMY K G + A ++
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKL 284
Query: 133 FENMKNKSVITWTTMIAGLA-------------------------------LHGLGREAL 161
F+ M + V +WT M+ G A +G +EAL
Sbjct: 285 FDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEAL 344
Query: 162 DMFSRMERARV-KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F+ ++ +++ KP+E+T ++ LSAC +G ++LG + ++ R GI ++D
Sbjct: 345 AIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVD 403
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G L++A ++ + E + +W +++A ++G
Sbjct: 404 MYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHG 440
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPD 74
+ + L+ AR LF+ + + N+ +W TLI YA P ++ +F + + E++ P+
Sbjct: 67 SALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PN 125
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + A ++L A +G +H + + + N+L+ Y G + A ++F+
Sbjct: 126 KFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFK 185
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ K V++W +MI+ A +AL++F +MER V PN +T + +LSAC +E
Sbjct: 186 GISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEF 245
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR + ++ R GI+ + M+D+ + G + +A+KL MP E + W +L
Sbjct: 246 GRWVCSYIE-RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGY 303
Query: 255 NIYGDVE 261
GD +
Sbjct: 304 AKMGDYD 310
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 234/324 (72%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++GYA++G + A+ LF LM +K ++SWT +I+GY + EA+ FR MQ+ +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L +CAQLG++ELG+WIH Y E+ G + NALI+MY+K G I +A+Q
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M+ K VI+W+TMI+G A HG A++ F+ M+RA+VKPN ITF+ +LSAC HVG+
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RYF++M+ Y IEPKIE YGC+ID+L RAG L+ A ++ + MP + ++ IWGSLL
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ G++++ A+ HL++LEP + GNY +L+NIYA LG+W + ++RK++R+ +KK
Sbjct: 418 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 477
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHP 335
PG S IEV+ V EFV+GD S P
Sbjct: 478 TPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 39/326 (11%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-P 73
MV K+ D++ A LF ++ NV + ++I Y + I +++++ ++ + P
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP 107
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM-------------- 119
D +CA LG+ LG+ +H ++ ++G V NALIDM
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 120 -----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
YA+ G++ KA +F M +K++++WT MI+G G EA+D
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
F M+ A ++P+EI+ I++L +C +G +ELG ++ ++ R G + +I++
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMY 286
Query: 223 GRAGYLQEAEKLLRRMPFEANAAI-WGSLLAASNIYGDVELGECALQHL--IKLEPHNSG 279
+ G + +A +L +M E I W ++++ +G+ + K++P+
Sbjct: 287 SKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 280 NYAILSNIYAILGRWNESGKIRKVMR 305
+LS + G W E + +MR
Sbjct: 345 FLGLLSACSHV-GMWQEGLRYFDMMR 369
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 95 EW--IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
EW I+ I +GL+ + ++D K + A ++F + N +V + ++I
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 153 LHGLGREALDMFSRMERARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
+ L + + ++ ++ R + P+ TF + +C +G LG++ + ++G
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL-CKFGPRFH 143
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ +ID+ + L +A K+ M +E + W SLL+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSG 184
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 164/337 (48%), Positives = 234/337 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ GYAK G L+ A LF M EKNV++W +I Q + EA+ LFR MQ N+
Sbjct: 324 WTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNM 383
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD++ ML LSAC+QLGA++ G W HNYI+++ L+ V L ALIDMYAK G + KALQ
Sbjct: 384 KPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQ 443
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++ +TWT +I GLAL+G +A+ FS+M + + P+EITF+ +L+ACCH GL
Sbjct: 444 VFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGL 503
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ MKSR+ + P+ + Y CM++LLGRAG L+EAE+L++ MP EA+A +WG+L
Sbjct: 504 VEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALF 563
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ ++ +GE A L+ L+PH+SG Y +L+N+Y G+W E+ IRK+M + GV+K
Sbjct: 564 FACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEK 623
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PG S IEV+ ++EF+ D SHP +++Y+ IN
Sbjct: 624 TPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLIN 660
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 156/281 (55%), Gaps = 33/281 (11%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
+N ++ VG+ A +F+ ++++SW +LI GY + QP EA+ ++++M E+
Sbjct: 191 LYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEH 250
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKPDE+ M+ +SACAQL +++LG IH YIE+ GLN + L NAL+DMY K G +
Sbjct: 251 VKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGK 310
Query: 131 QVFENMKNKSVITWTTMIAGLALHGL----GR---------------------------E 159
+F+NM+ K+V++WTTMI G A +GL G+ E
Sbjct: 311 VLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFE 370
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL++F M+ + +KP+++T + LSAC +G ++ G N +K ++ + + +I
Sbjct: 371 ALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIK-KHNLSLDVALGTALI 429
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
D+ + G + +A ++ MP N+ W +++ +YG+V
Sbjct: 430 DMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNV 469
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVEL 93
+ NV SW +I G + + P + + L++RM +PD CA L +
Sbjct: 113 LQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYM 172
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G I + + G + + L N +I M G+ G A +VF+ + +++W ++I G
Sbjct: 173 GFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVR 232
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
REA+ ++ +M VKP+E+T I ++SAC + ++LGR ++ G+ KI
Sbjct: 233 RRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEES-GLNLKIS 291
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRM 238
++D+ + G L+ + L M
Sbjct: 292 LVNALMDMYVKCGDLEAGKVLFDNM 316
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 233/348 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A K GD A LF M E+NV SWT++IAGY Q + EAI LF +M+ V
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E+ ++A L+ACA LGA++LG IH Y ++G V ++N LIDMY K G + +A +
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACK 316
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ ++V++W+ MI GLA+HG EAL +FS M + ++PN +TFI +L AC H+GL
Sbjct: 317 VFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GRR+F M YGI P+IE YGCM+DLL RAG L EA + + MP + N +WG+LL
Sbjct: 377 ISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 436
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ +VE+ E A++HL++L+P N G Y +LSNIYA GRW ++ ++RK M+D VKK
Sbjct: 437 GACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKK 496
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S I V VHEFVAG+ SHPD ++++Q ++ +M+ ++ N
Sbjct: 497 TPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 28 ARALFELMTEKN--VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
A+ +FE + ++ W + + A+ D P +AI LF R++ +V PD + L AC
Sbjct: 79 AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW- 144
L + G +H +E+ G + + L N ++ +YA G++G+A +FE M + V+TW
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198
Query: 145 ------------------------------TTMIAGLALHGLGREALDMFSRMERARVKP 174
T+MIAG G +EA+ +F++ME A VK
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
NE+T +A+L+AC +G ++LG R +R+G + + +ID+ + G L+EA K+
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDVE 261
M E W +++ ++G E
Sbjct: 318 FEEME-ERTVVSWSAMIGGLAMHGRAE 343
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 233/348 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A K GD A LF M E+NV SWT++IAGY Q + EAI LF +M+ V
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E+ ++A L+ACA LGA++LG IH Y ++G V ++N LIDMY K G + +A +
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACK 316
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ ++V++W+ MI GLA+HG EAL +FS M + ++PN +TFI +L AC H+GL
Sbjct: 317 VFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GRR+F M YGI P+IE YGCM+DLL RAG L EA + + MP + N +WG+LL
Sbjct: 377 ISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 436
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ +VE+ E A++HL++L+P N G Y +LSNIYA GRW ++ ++RK M+D VKK
Sbjct: 437 GACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKK 496
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S I V VHEFVAG+ SHPD ++++Q ++ +M+ ++ N
Sbjct: 497 TPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 33/250 (13%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W + + A+ D P +AI LF R++ +V PD + L AC L + G +H +E
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW------------------ 144
+ G + + L N ++ +YA G++G+A +FE M + V+TW
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 145 -------------TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
T+MIAG G +EA+ +F++ME A VK NE+T +A+L+AC +G
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG R +R+G + + +ID+ + G L+EA K+ M E W +++
Sbjct: 276 LDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMI 333
Query: 252 AASNIYGDVE 261
++G E
Sbjct: 334 GGLAMHGRAE 343
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 239/354 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M++GY++VG + +AR +F+ M EK+++ W+ +I+GYA+ D+P EA+ LF MQV +K
Sbjct: 18 TAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIK 77
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ +L+ +SACA+LG ++ +WIH Y+++ GL +P+NNALIDMYAK G +G A V
Sbjct: 78 PDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGV 137
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M++++VI+WT+MI A+HG AL F +M+ +KPN +TF+ +L AC H GLV
Sbjct: 138 FEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLV 197
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR F M + + I PK E YGCM+DL GRA L++A +L+ MP N IWGSL+A
Sbjct: 198 EEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMA 257
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+ ELGE A + +++LEP + G LSNIYA RW + G++R +M+ G+ K
Sbjct: 258 ACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRGISKE 317
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
GCS IE++ +V+EFV D H D++Y+ L ++ ++K + N S +++
Sbjct: 318 RGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVD 371
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY K ++NA+A+F+ M EK+V+SW+++I+GYAQ D +E + LF+ MQ+
Sbjct: 445 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 504
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE +++ +SACA+L A+E G+W+H YI++ GL V L LIDMY K G + AL+
Sbjct: 505 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 564
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M K + TW +I GLA++GL +LDMFS M++ V PNEITF+ +L AC H+GL
Sbjct: 565 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 624
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+ +F M + I+P ++ YGCM+DLLGRAG LQEAE+LL RMP + A WG+LL
Sbjct: 625 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 684
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +GD E+G + LI+L+P + G + +LSNIYA G+W++ +IR +M V K
Sbjct: 685 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 744
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
+PGCS IE + +HEF+AGD +HPD D + +L ++ ++K
Sbjct: 745 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 786
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ + G + A LF+ M EK++++W+ LIA + Q + EAI F M V
Sbjct: 314 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVM 373
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI------ 126
DE+ ++ALSACA L V +G+ IH+ + G + + L NALI MY+K G I
Sbjct: 374 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 433
Query: 127 -------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
A +F++M K V++W++MI+G A + L E L
Sbjct: 434 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 493
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ + KP+E T ++++SAC + +E G+ +K R G+ + +ID+
Sbjct: 494 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK-RNGLTINVILGTTLIDM 552
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G ++ A ++ M E + W +L+ + G VE
Sbjct: 553 YMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 591
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 101/223 (45%), Gaps = 40/223 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ ++ ++ +A +F + + +SW +++AGY ++ EA ++ +M
Sbjct: 252 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP----- 306
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E +++A+ N++I ++ G + +A ++
Sbjct: 307 --ERSIIAS--------------------------------NSMIVLFGMRGLVVEACKL 332
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K ++TW+ +IA + + EA+ F M + V +E+ ++ LSAC ++ +V
Sbjct: 333 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVV 392
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+G + + + + G E I +I + + G + A KL
Sbjct: 393 NMG-KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 434
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 49 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW----IHNYIEQY 104
Y Q + P+ A TL++ M + D + AC ++ EW +HN++ +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQAC----SIRRSEWEAKQVHNHVLKL 242
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
G ++ V + N LI+ ++ + A +VF ++W +++AG G EA ++
Sbjct: 243 GFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIY 302
Query: 165 SRM-ERARVKPNEITFI 180
+M ER+ + N + +
Sbjct: 303 HQMPERSIIASNSMIVL 319
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 233/345 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G AK G+L +AR LF+ M+E++ ISW++++ GY + EA+ +F++MQ E
Sbjct: 231 WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + + L+AC+ +GA++ G W+H Y+++ + L AL+DMYAK G++ +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE MK + + TW MI GLA+HG +AL++FS+++ R+KPN IT + +L+AC H G
Sbjct: 351 VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGF 410
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F M+ YG++P++E YGCM+DLLGR+G EAE L+ MP + NAA+WG+LL
Sbjct: 411 VDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL 470
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+ +L E + L++LEP NSG Y +LSNIYA +GR+++ KIRK+M+D G+K
Sbjct: 471 GACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKT 530
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
+PG S ++++ VHEF GD SHP +Y+ L I +++ A H
Sbjct: 531 VPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGH 575
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
+ + A +F + NV W +I G + ++ +AI + RM ++ +P++
Sbjct: 82 NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFK 140
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
AC+ AV+ G IH ++ ++G+ + V + +A I MYA G++ A ++F + ++ V+
Sbjct: 141 ACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES-DVVC 199
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W TMI G G+ A +F++M + ++ +++ G + R+ F+ M
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMS 255
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA---IWGSLLAASNIYGDV 260
R I + M+D AG +EA ++ ++M E I S+LAA + G +
Sbjct: 256 ERDEI-----SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310
Query: 261 ELG 263
+ G
Sbjct: 311 DQG 313
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 237/343 (69%), Gaps = 3/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M++GY GDL AR LF+ ++V+ WT +I GY Q ++A+ LFR MQ++ V
Sbjct: 413 WTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRV 472
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ ++ L+ CAQLGA+E G+WIH Y+++ + V + ALI+MY+K G + K+L+
Sbjct: 473 KPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLE 532
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +++K +WT++I GLA++G EAL +FS MER KP++ITFI +LSAC H GL
Sbjct: 533 IFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGL 592
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN---AAIWG 248
VE GRR+FN MK + IEPK+E YGC+IDLLGRAG L EAE+L++ +P E ++G
Sbjct: 593 VEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYG 652
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +V++GE + L +E +S + +L+NIYA + RW ++ K+R+ M+++G
Sbjct: 653 ALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELG 712
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
VKKMPGCS IEV VHEF+ GD SHP+ + +L ++ GQ+
Sbjct: 713 VKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 35/218 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
+N+++ Y ++ ++ NA+ LF+ MT ++ +SW +I+GY + + +AI FR MQ E N
Sbjct: 281 YNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 340
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKA 129
KPDE +++ LSAC L +ELG+ IHNY+ ++ G T ++NAL+DMYAK G + A
Sbjct: 341 EKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTT--RIDNALLDMYAKCGCLNIA 398
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR----------------------- 166
+F+ M K+VI WT+MI+G G REA D+F +
Sbjct: 399 RNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFD 458
Query: 167 --------MERARVKPNEITFIAILSACCHVGLVELGR 196
M+ RVKP++ T + +L+ C +G +E G+
Sbjct: 459 DAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+ +G+L A +F + + ++ + ++ YA+ + + LF++++ + + PD
Sbjct: 188 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYP 247
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L A L V GE + +I + G++ + N+LIDMY + + A ++F+ M +
Sbjct: 248 FVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR 307
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRY 198
++W MI+G +A++ F M++ KP+E T ++ LSAC + +ELG
Sbjct: 308 DSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEI 367
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
N ++ G +I+ ++D+ + G L A + M + N W S+++ G
Sbjct: 368 HNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCG 424
Query: 259 DV 260
D+
Sbjct: 425 DL 426
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY K ++NA+A+F+ M EK+V+SW+++I+GYAQ D +E + LF+ MQ+
Sbjct: 310 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 369
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE +++ +SACA+L A+E G+W+H YI++ GL V L LIDMY K G + AL+
Sbjct: 370 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 429
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M K + TW +I GLA++GL +LDMFS M++ V PNEITF+ +L AC H+GL
Sbjct: 430 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 489
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+ +F M + I+P ++ YGCM+DLLGRAG LQEAE+LL RMP + A WG+LL
Sbjct: 490 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 549
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +GD E+G + LI+L+P + G + +LSNIYA G+W++ +IR +M V K
Sbjct: 550 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 609
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
+PGCS IE + +HEF+AGD +HPD D + +L ++ ++K
Sbjct: 610 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 651
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ + G + A LF+ M EK++++W+ LIA + Q + EAI F M V
Sbjct: 179 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVM 238
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI------ 126
DE+ ++ALSACA L V +G+ IH+ + G + + L NALI MY+K G I
Sbjct: 239 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 298
Query: 127 -------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
A +F++M K V++W++MI+G A + L E L
Sbjct: 299 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 358
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ + KP+E T ++++SAC + +E G+ +K R G+ + +ID+
Sbjct: 359 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK-RNGLTINVILGTTLIDM 417
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G ++ A ++ M E + W +L+ + G VE
Sbjct: 418 YMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 456
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ R +F + N W +I Y Q + P+ A TL++ M + D + A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 85 CAQLGAVELGEW----IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
C ++ EW +HN++ + G ++ V + N LI+ ++ + A +VF
Sbjct: 88 C----SIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD 143
Query: 141 VITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEI 177
++W +++AG G EA ++ +M ER+ + N +
Sbjct: 144 SVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 181
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 108/241 (44%), Gaps = 41/241 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ ++ ++ +A +F + + +SW +++AGY ++ EA ++ +M
Sbjct: 117 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP----- 171
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E +++A+ N++I ++ G + +A ++
Sbjct: 172 --ERSIIAS--------------------------------NSMIVLFGMRGLVVEACKL 197
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K ++TW+ +IA + + EA+ F M + V +E+ ++ LSAC ++ +V
Sbjct: 198 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVV 257
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+G + + + + G E I +I + + G + A KL + + W S+++
Sbjct: 258 NMG-KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMIS 315
Query: 253 A 253
Sbjct: 316 G 316
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 227/317 (71%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYA+ G L+ AR + + EK+V+ W +I+G Q Q EA+ LF MQ+ +
Sbjct: 328 WTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTI 387
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD++ M+ LSAC+QLGA+++G WIH+YIE++ L+ V L AL+DMYAK G I +ALQ
Sbjct: 388 EPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQ 447
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + ++ +TWT +I GLALHG ++AL FS+M + P+EITF+ +LSACCH GL
Sbjct: 448 VFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGL 507
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ M S++ + PK++ Y CM+DLLGRAG+L+EAE+L++ MP A+AA+ G+L
Sbjct: 508 VEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALF 567
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +YG+V++GE L++++P +SGNY +L+++Y+ W E+ RK+M D GV+K
Sbjct: 568 FACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEK 627
Query: 312 MPGCSYIEVSKRVHEFV 328
PGCS +E++ VHEFV
Sbjct: 628 TPGCSLVEINGIVHEFV 644
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 146/280 (52%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + G+L+ A +F +++++W ++I G + EAI +++ M+ E V+
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI M+ +S+C+Q+ + LG+ H YI+++GL +PL NAL+DMY K G++ A +
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVL 316
Query: 133 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 161
F+NM K++++WTTM+ G A G G+EAL
Sbjct: 317 FDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEAL 376
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ ++P+++T + LSAC +G +++G + ++ R+ + + ++D+
Sbjct: 377 ALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE-RHKLSIDVALGTALVDM 435
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + A ++ +P + N W +++ ++G+ +
Sbjct: 436 YAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQ 474
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACA 86
R L+ + E NV SW I GY + L++RM + +KPD L C
Sbjct: 111 TRILYRI-KELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCC 169
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
+ LG + ++ ++G + ++NA I M G++ A VF + + ++TW +
Sbjct: 170 GQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNS 229
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
MI G GL EA+ ++ ME +V+PNEIT I ++S+C V + LG+ + +K +
Sbjct: 230 MITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK-EH 288
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
G+E I ++D+ + G L A L M
Sbjct: 289 GLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 237/343 (69%), Gaps = 3/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M++GY GDL AR LF+ ++V+ WT +I GY Q ++A+ LFR MQ++ +
Sbjct: 367 WTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKI 426
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ ++ L+ CAQLGA+E G+WIH Y+++ + V + ALI+MY+K G + K+L+
Sbjct: 427 KPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLE 486
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +++K +WT++I GLA++G EAL +FS MER KP++ITFI +LSAC H GL
Sbjct: 487 IFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGL 546
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN---AAIWG 248
VE GRR+FN MK + IEPK+E YGC+IDLLGRAG L EAE+L++ +P E ++G
Sbjct: 547 VEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYG 606
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +V++GE + L +E +S + +L+NIYA + RW ++ K+R+ M+++G
Sbjct: 607 ALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELG 666
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
VKKMPGCS IEV VHEF+ GD SHP+ + +L ++ GQ+
Sbjct: 667 VKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 35/218 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
+N+++ Y ++ ++ NA+ LF+ MT ++ +SW +I+GY + + +AI FR MQ E N
Sbjct: 235 YNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 294
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKA 129
KPDE +++ LSAC L +ELG+ IHNY+ ++ G T ++NAL+DMYAK G + A
Sbjct: 295 EKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTT--RIDNALLDMYAKCGCLNIA 352
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR----------------------- 166
+F+ M K+VI WT+MI+G G REA D+F +
Sbjct: 353 RNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFD 412
Query: 167 --------MERARVKPNEITFIAILSACCHVGLVELGR 196
M+ ++KP++ T + +L+ C +G +E G+
Sbjct: 413 DAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+ +G+L A +F + + ++ + ++ YA+ + + LF++++ + + PD
Sbjct: 142 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYP 201
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L A L V GE + +I + G++ + N+LIDMY + + A ++F+ M +
Sbjct: 202 FVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR 261
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRY 198
++W MI+G +A++ F M++ KP+E T ++ LSAC + +ELG
Sbjct: 262 DSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEI 321
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
N ++ G +I+ ++D+ + G L A + M + N W S+++ G
Sbjct: 322 HNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCG 378
Query: 259 DV 260
D+
Sbjct: 379 DL 380
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 235/341 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM++GYA+ G L+ +R LF+ M EK+V+ W +I G Q + +A+ LF+ MQ N
Sbjct: 326 WTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNT 385
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDEI M+ LSAC+QLGA+++G WIH YIE+Y L+ V L +L+DMYAK G I +AL
Sbjct: 386 KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ ++ +T+T +I GLALHG A+ F+ M A + P+EITFI +LSACCH G+
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GR YF+ MKSR+ + P+++ Y M+DLLGRAG L+EA++L+ MP EA+AA+WG+LL
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++G+VELGE A + L++L+P +SG Y +L +Y W ++ + R++M + GV+K
Sbjct: 566 FGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PGCS IEV+ V EF+ D S P+ +++Y L + M+
Sbjct: 626 IPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 154/287 (53%), Gaps = 39/287 (13%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L+ N + +A GD+ NAR +F+ ++++SW LI GY ++ + +AI +++ M
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ E VKPD++ M+ +S+C+ LG + G+ + Y+++ GL +PL NAL+DM++K G I
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGL------------------------------ 156
+A ++F+N++ +++++WTTMI+G A GL
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368
Query: 157 -GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKI 212
G++AL +F M+ + KP+EIT I LSAC +G +++G RY +Y + +
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE----KYSLSLNV 424
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++D+ + G + EA + + N+ + +++ ++GD
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDEIAMLAALSACAQLGAVELGE 95
N+ SW I G+++ + P E+ L+++M +PD CA L LG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 96 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
I ++ + L + ++NA I M+A G + A +VF+ + +++W +I G G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
+A+ ++ ME VKP+++T I ++S+C +G + G+ ++ +K G+ I
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLV 295
Query: 216 GCMIDLLGRAGYLQEAEKLL 235
++D+ + G + EA ++
Sbjct: 296 NALMDMFSKCGDIHEARRIF 315
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 4/349 (1%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
R + WN M++G+++ G + AR F+ M E++ ISW+ +I GY Q EA+ +F
Sbjct: 232 DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFH 291
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+MQ E ++P + + + LSACA LGA++ G WIH Y ++ + L +L+DMYAK G
Sbjct: 292 QMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCG 351
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+I A +VFE M NK V +W MI GLA+HG +A+D+FS+M+ + PNEITF+ +L+
Sbjct: 352 RIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLN 408
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ G FN M+ YG+EP+IE YGC++DLLGRAG L EAEK++ +P E
Sbjct: 409 ACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTP 468
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
A+WG+LL A +G+VELGE + L++LEP NSG Y +LSNIYA GRW E G++RK+M
Sbjct: 469 AVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLM 528
Query: 305 RDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++ G+K PG S I++ + VH+F+ GD SHP +YQ+L K+ +++
Sbjct: 529 KERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQ 577
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 71/317 (22%)
Query: 14 TMVAGYAKVG-----DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++V YA V ++ +F+ + + NV W +I + ++P +AI L+ M V
Sbjct: 71 SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMV 130
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-----------------NTIVP 111
+ +P++ A L AC+ G V G +H ++ ++GL +V
Sbjct: 131 AHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 190
Query: 112 LN---------------NALIDMYAKSGKIGKALQVFENMKNKSV--------------- 141
NA+ID Y + G++ A ++FE M ++S+
Sbjct: 191 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCG 250
Query: 142 -----------------ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I+W+ MI G G EAL++F +M++ +++P + ++LS
Sbjct: 251 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 310
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++G ++ G R+ + R I+ ++D+ + G + A ++ +M
Sbjct: 311 ACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEV 368
Query: 245 AIWGSLLAASNIYGDVE 261
+ W +++ ++G E
Sbjct: 369 SSWNAMIGGLAMHGRAE 385
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 4/349 (1%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
R + WN M++G+++ G + AR F+ M E++ ISW+ +I GY Q EA+ +F
Sbjct: 233 DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFH 292
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+MQ E ++P + + + LSACA LGA++ G WIH Y ++ + L +L+DMYAK G
Sbjct: 293 QMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCG 352
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+I A +VFE M NK V +W MI GLA+HG +A+D+FS+M+ + PNEITF+ +L+
Sbjct: 353 RIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLN 409
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ G FN M+ YG+EP+IE YGC++DLLGRAG L EAEK++ +P E
Sbjct: 410 ACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTP 469
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
A+WG+LL A +G+VELGE + L++LEP NSG Y +LSNIYA GRW E G++RK+M
Sbjct: 470 AVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLM 529
Query: 305 RDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++ G+K PG S I++ + VH+F+ GD SHP +YQ+L K+ +++
Sbjct: 530 KERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQ 578
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 71/317 (22%)
Query: 14 TMVAGYAKVG-----DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++V YA V ++ +F+ + + NV W +I + ++P +AI L+ M V
Sbjct: 72 SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVV 131
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-----------------NTIVP 111
+ +P++ A L AC+ G V G +H ++ ++GL +V
Sbjct: 132 AHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191
Query: 112 LN---------------NALIDMYAKSGKIGKALQVFENMKNKSV--------------- 141
NA+ID Y + G++ A ++FE M ++S+
Sbjct: 192 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCG 251
Query: 142 -----------------ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I+W+ MI G G EAL++F +M++ +++P + ++LS
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 311
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++G ++ G R+ + R I+ ++D+ + G + A ++ +M
Sbjct: 312 ACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEV 369
Query: 245 AIWGSLLAASNIYGDVE 261
+ W +++ ++G E
Sbjct: 370 SSWNAMIGGLAMHGRAE 386
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 225/338 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ YAK G+L+ AR LF+ M E++ + W +I GY Q PNEA+ LFRRM KP+
Sbjct: 130 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 189
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ +L+ LSAC QLGA+E G W+H+YIE G+ V + AL+DMY+K G + A VF+
Sbjct: 190 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 249
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +K V+ W +MI G A+HG +EAL +F M R + P ITFI ILSAC H G V
Sbjct: 250 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE 309
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G FN MK YGIEPKIE YGCM++LLGRAG++++A +L++ M E + +WG+LL A
Sbjct: 310 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 369
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G + LGE ++ L+ NSG Y +LSNIYA +G W+ ++R +M+D GVKK PG
Sbjct: 370 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 429
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IEV+ +VHEF+AG +HP +Y +L +ING +K
Sbjct: 430 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 467
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA +G L+ + ALF +V WT +I G+A A LF M P++
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTM------PEK--- 122
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++V L A++ YAK G++ A +F+ M+
Sbjct: 123 -----------------------------SLVSLT-AMLTCYAKHGELDAARVLFDGMEE 152
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ + W MI G +G+ EAL +F RM +A+ KPNE+T +++LSAC +G +E GR
Sbjct: 153 RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWV 212
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +++ GI+ + ++D+ + G L++A + ++ + + W S++ ++G
Sbjct: 213 HSYIENN-GIQFNVHVGTALVDMYSKCGSLEDARLVFDKID-DKDVVAWNSMIVGYAMHG 270
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GL+ LN L YA G++ ++ +F +N SV WT +I G AL G
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A +F M + ++ A+L+ G ++ R F+ M+ R G+ +
Sbjct: 109 VVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGV-----CWN 159
Query: 217 CMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELG 263
MID + G EA L RRM + N S+L+A G +E G
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 209
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 225/338 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ YAK G+L+ AR LF+ M E++ + W +I GY Q PNEA+ LFRRM KP+
Sbjct: 196 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 255
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ +L+ LSAC QLGA+E G W+H+YIE G+ V + AL+DMY+K G + A VF+
Sbjct: 256 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 315
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +K V+ W +MI G A+HG +EAL +F M R + P ITFI ILSAC H G V
Sbjct: 316 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE 375
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G FN MK YGIEPKIE YGCM++LLGRAG++++A +L++ M E + +WG+LL A
Sbjct: 376 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 435
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G + LGE ++ L+ NSG Y +LSNIYA +G W+ ++R +M+D GVKK PG
Sbjct: 436 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 495
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IEV+ +VHEF+AG +HP +Y +L +ING +K
Sbjct: 496 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 533
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 37/271 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA +G L+ + ALF +V WT +I G+A +A+ + +M + V+P+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L C +E G+ +H+ + G ++ + + L+D+YA+ G + A Q+F+ M
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187
Query: 139 KSVIT-------------------------------WTTMIAGLALHGLGREALDMFSRM 167
KS+++ W MI G +G+ EAL +F RM
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+A+ KPNE+T +++LSAC +G +E GR + +++ GI+ + ++D+ + G
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCGS 306
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
L++A + ++ + + W S++ ++G
Sbjct: 307 LEDARLVFDKID-DKDVVAWNSMIVGYAMHG 336
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GL+ LN L YA G++ ++ +F +N SV WT +I G AL GL
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL+ +++M V+PN TF +IL C +E G+ + + G + +
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKA-LHSQAVKLGFDSDLYVRT 163
Query: 217 CMIDLLGRAGYLQEAEKLLRRMP 239
++D+ R G + A++L MP
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMP 186
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 235/347 (67%), Gaps = 8/347 (2%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F L+ LL+ WN+++ GY K G ++ A LF M EKN ISWTT+I+GY Q
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
D EA+ LF MQ +V+PD +++ ALSACAQLGA+E G+WIH+Y+ + + L
Sbjct: 226 DMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG 285
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
LIDMYAK G++ +AL+VF+N+K KSV WT +I+G A HG GREA+ F M++ +K
Sbjct: 286 CVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIK 345
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
PN ITF A+L+AC + GLVE G+ F M+ Y ++P IE YGC++DLLGRAG L EA++
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKR 405
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 293
++ MP + NA IWG+LL A I+ ++ELGE + LI ++P++ G Y +NI+A+ +
Sbjct: 406 FIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKK 465
Query: 294 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
W+++ + R++M++ GV K+PGCS I + HEF+AGD SHP+ +++
Sbjct: 466 WDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 41/269 (15%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A+ +F+ + W +I G++ D+P ++ L++RM + + + L A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------------- 121
C+ L A E IH I + G V N+LI+ YA
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 122 --------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
K+GK+ AL +F M K+ I+WTTMI+G + +EAL +F M+ + V+
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 174 PNEITFIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYGC-MIDLLGRAGYLQ 229
P+ ++ LSAC +G +E G+ Y N K+R ++ + GC +ID+ + G ++
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLN--KTRIRMDSVL---GCVLIDMYAKCGEME 299
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYG 258
EA ++ + + ++ A W +L++ +G
Sbjct: 300 EALEVFKNIKKKSVQA-WTALISGYAYHG 327
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 233/345 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G AK G+L +AR LF+ M+E++ ISW++++ GY + EA+ +F++MQ E
Sbjct: 231 WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + + L+AC+ +GA++ G W+H Y+++ + L AL+DMYAK G++ +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE MK + + TW MI GLA+HG +AL++FS+++ R+KPN IT + +L+AC H G
Sbjct: 351 VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGF 410
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F M+ YG++P++E YGCM+DLLGR+G EAE L+ MP + NAA+WG+LL
Sbjct: 411 VDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL 470
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+ +L E + L++LEP NSG Y +LSNIYA +GR+++ KIRK+M++ G+K
Sbjct: 471 GACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKT 530
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
+PG S ++++ VHEF GD SHP +Y+ L I +++ A H
Sbjct: 531 VPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGH 575
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
+ + A +F + NV W +I G + ++ +AI + RM ++ +P++
Sbjct: 82 NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFK 140
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
AC+ AV+ G IH ++ ++G+ + V + +A I MYA G++ A ++F + ++ V+
Sbjct: 141 ACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES-DVVC 199
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W TMI G G+ A +F++M + ++ +++ G + R+ F+ M
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMS 255
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA---IWGSLLAASNIYGDV 260
R I + M+D AG +EA ++ ++M E I S+LAA + G +
Sbjct: 256 ERDEI-----SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310
Query: 261 ELG 263
+ G
Sbjct: 311 DQG 313
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 237/343 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+AG+ K G++ +A LF M ++V+SW +++A YAQ +PNEA+ LF +M+ V
Sbjct: 326 WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP E +++ LSACA LGA++ G +H YI + + AL+DMYAK GKI A Q
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF+AILSAC H G+
Sbjct: 446 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 505
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ + M S YGIEPK+E YGC+IDLL RAG+L+EA +L+ MP E N + G+LL
Sbjct: 506 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 565
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+ K
Sbjct: 566 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 625
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 626 VPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 668
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 136/275 (49%), Gaps = 12/275 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA DL A+ LF L + ++V+SW +I GY + + A +F RM +V
Sbjct: 234 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDV- 292
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
I+ ++ A +G ++ + + + + + L + N+++ + K G + A +
Sbjct: 293 ---ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSW----NSMLAGFVKCGNVEDAFGL 345
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + V++W +M+A A G EAL +F +M VKP E T +++LSAC H+G +
Sbjct: 346 FSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 405
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + IE ++D+ + G + A ++ M + W +++A
Sbjct: 406 DKGLHLHTYINDNR-IEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIA 463
Query: 253 ASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
I+G+V+ + + + + +EP++ AILS
Sbjct: 464 GMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A+ +F + + +LI + P EA+ L+ M +KPD + + AC +
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
G +H ++ + G + ++LI +YA +G A Q+F + V++W M
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I G H A +F RM V + I++ +++ VG ++ +R F+ M R
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPER-- 321
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + M+ + G +++A L MP + W S+LA
Sbjct: 322 ---NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCR-DVVSWNSMLA 362
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 236/356 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G+L+ AR LF+ M ++V++W+ +I+GY Q D+ EA+ +F MQ V
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+++ M++ LSACA LGA+E G+W+H+YI + L V L AL+D YAK G I A++
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+M ++ TWT +I G+A +G REAL++FS M A ++P ++TFI +L AC H LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR+F M YGI P+IE YGCM+DLLGRAG + EA + +R MP E NA +W +LL+
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +VE+GE AL+ ++ L+P +SGNY +LSN YA +G+W + +RK M++ GV+K+
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS IE+ + EF A D+ HP +Y+ + ++ +K ++ N L+ D
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVD 666
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 4/245 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD+ A LF + K VI+W +IAGY + E + +F+ M
Sbjct: 210 NSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAP 269
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DE+ +L+ +AC +LG LG+WI Y E+ G+ L AL+DMYAK G++ KA ++
Sbjct: 270 FDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRL 329
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++ V+ W+ MI+G REAL +F+ M+ V PN++T +++LSAC +G +
Sbjct: 330 FDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGAL 389
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ + ++ R + + ++D + G +++A K MP N W +L+
Sbjct: 390 ETGKWVHSYIR-RKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWTALIK 447
Query: 253 --ASN 255
ASN
Sbjct: 448 GMASN 452
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 5/231 (2%)
Query: 25 LNNARALFEL--MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAA 81
L+ A LF L ++ S+ LI + + P +A+ LF M + V PD+ +
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
+ +C+++ + +G + Y + G + N+LI MYA G + A +F ++ K V
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGV 237
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
I W MIAG +G +E ++MF M R +E+T +++ +AC +G LG+
Sbjct: 238 IAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEY 297
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + G+ ++D+ + G L +A +L RM + W ++++
Sbjct: 298 AEEK-GMLRSRNLATALVDMYAKCGELDKARRLFDRM-HSRDVVAWSAMIS 346
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 235/334 (70%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ GY ++G+L AR LF+ M +++V+SW +IAGYAQ EA+ +FR MQ+
Sbjct: 195 LWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAE 254
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P+ + +++ L A ++LGA+ELG+W+H Y + + L +ALIDMYAK G I KAL
Sbjct: 255 VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKAL 314
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
QVFE + ++V+TW+T+IAGLA+HG ++ LD F MERA V P+++T+I +LSAC H G
Sbjct: 315 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 374
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR +F+ M G+EP+IE YGCM+DLLGRAG L+E+E+L+ MP + + IW +L
Sbjct: 375 LVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKAL 434
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++G+VE+G+ +HL++L PH+SG+Y LSNIYA LG W K+R +M++M V+
Sbjct: 435 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 494
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PGCS+IE+ +HEF+ D SHP +++ +L
Sbjct: 495 KDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSML 528
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 51/283 (18%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAA 81
DL+ AR +F M N S+ TLI ++ + P +A+ +F M VE+ V+P+ +
Sbjct: 60 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSV 118
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTI-------------------------------- 109
AC + + G +H ++GL++
Sbjct: 119 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 178
Query: 110 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
V L N +ID Y + G++ A +F+ M +SV++W MIAG A G
Sbjct: 179 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 238
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
+EA+++F M+ A V PN +T +++L A +G +ELG ++ ++ R I
Sbjct: 239 HFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLG 297
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +++A ++ +P + N W +++A ++G
Sbjct: 298 SALIDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHG 339
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 230/336 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY K G++ A +F M E+N+ISWT++I+G +P EA+ LF RMQ +
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D +A+++ L ACA LG ++ G+WIH YI+++ + L LIDMYAK G + +A++
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIE 306
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ K V WT MI+G A+HG GREAL+ F +M+ A V+PN++TF IL+AC H GL
Sbjct: 307 VFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V + F M+ +G +P IE YGCM+DLLGRAG L+EAE+L+ MP + NAAIWG+LL
Sbjct: 367 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +I+G++ELG+ + LI+++P + G Y L++I+A G WN++ ++R+ M++ GV K
Sbjct: 427 NACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSK 486
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
+PGCS I V+ HEF+AGD SHP + +L +I
Sbjct: 487 LPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQI 522
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 145/285 (50%), Gaps = 40/285 (14%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F+ + N W T+I GY+ +P EA+ L+ M +V + L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK-------------- 128
AC+ + A+E + IH +I + G + + N+L+++Y+KSG I
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 129 -----------------ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
A ++F +M +++I+WT+MI+G G +EAL++F RM+ A
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245
Query: 172 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC-MIDLLGRAGYLQ 229
+K + + ++ L AC +G+++ G+ + I K I+P + GC +ID+ + G L+
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLE 302
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
EA ++ R+M E ++W ++++ I+G G AL+ +K++
Sbjct: 303 EAIEVFRKME-EKGVSVWTAMISGYAIHGR---GREALEWFMKMQ 343
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A VF+ + + W TMI G + EAL ++ M V N TF +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 183 LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
L AC + +E ++ + +I+K +G E I ++++ ++G ++ A L ++ +
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSE--IYTTNSLLNVYSKSGDIKSARLLFDQVD-Q 181
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHL 270
+ W S++ G++E+ H+
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 230/336 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY K G++ A +F M E+N+ISWT++I+G +P EA+ LF RMQ +
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D +A+++ L ACA LG ++ G+WIH YI+++ + L LIDMYAK G + +A++
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIE 306
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ K V WT MI+G A+HG GREAL+ F +M+ A V+PN++TF IL+AC H GL
Sbjct: 307 VFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V + F M+ +G +P IE YGCM+DLLGRAG L+EAE+L+ MP + NAAIWG+LL
Sbjct: 367 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +I+G++ELG+ + LI+++P + G Y L++I+A G WN++ ++R+ M++ GV K
Sbjct: 427 NACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSK 486
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
+PGCS I V+ HEF+AGD SHP + +L +I
Sbjct: 487 LPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQI 522
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 40/285 (14%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F+ + N W T+I GY+ +P EA+ L+ M +V + L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK-------------- 128
AC+ + A E + IH +I + G + + N+L+++Y+KSG I
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 129 -----------------ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
A ++F +M +++I+WT+MI+G G +EAL++F RM+ A
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245
Query: 172 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC-MIDLLGRAGYLQ 229
+K + + ++ L AC +G+++ G+ + I K I+P + GC +ID+ + G L+
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLE 302
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
EA ++ R+M E ++W ++++ I+G G AL+ +K++
Sbjct: 303 EAIEVFRKME-EKGVSVWTAMISGYAIHGR---GREALEWFMKMQ 343
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A VF+ + + W TMI G + EAL ++ M V N TF +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 183 LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
L AC + E ++ + +I+K +G E I ++++ ++G ++ A L ++ +
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSE--IYTTNSLLNVYSKSGDIKSARLLFDQVD-Q 181
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHL 270
+ W S++ G++E+ H+
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 225/338 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ YAK G ++ AR LF+ + E++ I W +I GYAQ PNE + LFR+M V+P+
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ +LA LSAC Q GA+E G W+H+YIE G+ V + +LIDMY+K G + A VFE
Sbjct: 72 EVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFE 131
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ NK V+ W +M+ G A+HG ++AL +F M +P +ITFI +L+AC H GLV
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSE 191
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G ++F MK YGIEPK+E YGCM++LLGRAGYL+EA +L++ M + + +WG+LL A
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G++ LGE ++L+ NSG Y +LSNIYA G W ++R +M++ G +K PG
Sbjct: 252 RLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPG 311
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IEV+ +VHEF+AGD HP +Y++L +ING +K
Sbjct: 312 CSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLK 349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
A+I YAK G I +A +F+ ++ + I W MI G A HGL E L +F +M A+V+
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
PNE+T +A+LSAC G +E GR + +++ GI + +ID+ + G L++A
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENN-GIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
+ R+ + W S++ ++G
Sbjct: 129 VFERIS-NKDVVAWNSMVVGYAMHG 152
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y+K G L +AR +FE ++ K+V++W +++ GYA +A+ LF+ M + +
Sbjct: 111 TSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQ 170
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P +I + L+AC+ G V G ++ ++ ++YG+ V ++++ ++G + +A +
Sbjct: 171 PTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYE 230
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ +NM+ ++ + W T++ LHG
Sbjct: 231 LVKNMEIDQDPVLWGTLLGACRLHG 255
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 221/334 (66%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y K G++ A LFE ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 271 KIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 330
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+E+ ML+ L ACA LGA+++G WIH YI++ G++ L +LIDMYAK G I
Sbjct: 331 GESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIE 390
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF++M N+S+ +W MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 391 AAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACS 450
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ M + + IW
Sbjct: 451 HSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIW 510
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q+LIK+EP NSG+Y +LSNIYA GRWNE K R ++ D
Sbjct: 511 CSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDK 570
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 571 GMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 146/248 (58%), Gaps = 2/248 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ +F+ + K+V+SW LI+GYA+ EA+ LF+ M NV
Sbjct: 172 YTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNV 231
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M+ LSACAQ ++ELG +H++I+ +G + + + NALID+Y K G++ A
Sbjct: 232 KPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASG 291
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ PNE+T ++IL AC H+G
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 192 VELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K G+ +ID+ + G ++ A+++ M + + W ++
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAM 410
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 411 IFGFAMHG 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++F+ + E N++ W T+ G+A P A+ L+ M + P+ L A
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------------------- 125
CA+ A G+ IH ++ + G + + ++ +LI MY K+G+
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172
Query: 126 ------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
I A ++F+ + K V++W +I+G A G +EAL++F M + VK
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T + +LSAC +ELGR+ + + +G ++ +IDL + G ++ A
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETASG 291
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + ++ + W +L+
Sbjct: 292 LFEGLSYK-DVISWNTLIGG 310
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 231/350 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV GY+K+G + NAR++F M +K+++ W+ +I+GYA+ D P EA+ LF MQ +K
Sbjct: 293 TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ML+ ++ACA LGA++ +WIH ++++ G +P+NNALI+MYAK G + +A ++
Sbjct: 353 PDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRI 412
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+VI+WT MI+ A+HG AL F +ME ++PN ITF+ +L AC H GLV
Sbjct: 413 FDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLV 472
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR+ F M + + I PK YGCM+DL GRA L+EA +L+ MP N IWGSL+A
Sbjct: 473 EEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMA 532
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G++ELGE A + L++L+P + G + LSNIYA RW + G++RK+M+ G+ K
Sbjct: 533 ACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKE 592
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
GCS E++ +HEF+ D SH D +Y+ L ++ ++K + N S
Sbjct: 593 RGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCS 642
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 144/276 (52%), Gaps = 33/276 (11%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YA G + AR +F+ M ++V++W+ +I GY Q N+A+ LF M+ NV+PD
Sbjct: 163 LVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPD 222
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ + LSAC + G + G+ IH++I + + L +AL+ MYA G + AL +FE
Sbjct: 223 EMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFE 282
Query: 135 NM--KN-----------------------------KSVITWTTMIAGLALHGLGREALDM 163
M KN K ++ W+ MI+G A +EAL++
Sbjct: 283 KMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNL 342
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F+ M+ +KP+++T +++++AC H+G ++ ++ ++ + G + +I++
Sbjct: 343 FNEMQSLGIKPDQVTMLSVITACAHLGALDQA-KWIHLFVDKNGFGGALPINNALIEMYA 401
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ G L+ A ++ +MP N W +++A ++GD
Sbjct: 402 KCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGD 436
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ A L+ A ++F L+ + + ++ ++P + + ++ RM+ + + D
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVD 121
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L A +++ ++ G IH + G ++ + L+ MYA G+I +A +F+
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFD 181
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++ V+TW+ MI G GL +AL +F M+ V+P+E+ +LSAC G +
Sbjct: 182 KMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSY 241
Query: 195 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G+ + IM++ ++P ++ ++ + G + A L +M N +++
Sbjct: 242 GKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLFEKMT-PKNLVASTAMVTG 298
Query: 254 SNIYGDVELGECALQHLIK 272
+ G +E ++K
Sbjct: 299 YSKLGQIENARSVFNQMVK 317
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 223/334 (66%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WNT++ GYA GD+ LFE M E+NV SW LI GY + +E ++ F+RM V+
Sbjct: 182 WNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGT 241
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P++ ++ LSACA+LGA++LG+W+H Y E +G V + NAL+DMYAK G + AL
Sbjct: 242 VVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETAL 301
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF++M NK +I+W T+I GLA+HG G +AL++FS M+ A P+ ITFI IL AC H+G
Sbjct: 302 DVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMG 361
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G YF M Y I P+IE YGC++DLLGRAG L A +R+MP EA+A IW +L
Sbjct: 362 LVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAAL 421
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +Y +VEL E AL+ LI+ EP N NY +LSNIY GRW + +++ MRD G K
Sbjct: 422 LGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFK 481
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS IEV+ + EF + D HP+ +++Y L
Sbjct: 482 KLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTL 515
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GY DL AR LF+L E++++ W T+I+GY + A LF +M
Sbjct: 120 WTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKM----- 174
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P++ M W N +++ YA +G + +
Sbjct: 175 -PNKDVM----------------SW-----------------NTVLNGYASNGDVMACER 200
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
+FE M ++V +W +I G +G E L F RM V PN+ T + +LSAC +G
Sbjct: 201 LFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLG 260
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++LG ++ ++ +G + + ++D+ + G ++ A + + M + W ++
Sbjct: 261 ALDLG-KWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMD-NKDLISWNTI 318
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 319 IGGLAVHG 326
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 14/231 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
+ NA +F+ + E N W + GY+Q + + I LFR+M+ +V P+ L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C ++ A++ GE +H ++ + G + LIDMYA G I A +VF M ++VI W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNE--ITFIAILSACCHVGLVELGRRYFNIM 202
T MI G D+ + + P + + ++S V R F+ M
Sbjct: 121 TAMINGYI------TCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKM 174
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + + +++ G + E+L MP E N W +L+
Sbjct: 175 PNK-----DVMSWNTVLNGYASNGDVMACERLFEEMP-ERNVFSWNALIGG 219
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/343 (47%), Positives = 235/343 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K ++ +AR +F+ M ++VISW T+I GYA +PNEA+ LF +M+ V
Sbjct: 235 WNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGV 294
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP E +++ LSACA LGA++ G +H YI + + AL+DMYAK GKI A Q
Sbjct: 295 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 354
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF+AILSAC H G+
Sbjct: 355 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 414
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ + M S YGIEPK+E YGC+IDLL RAG+L+EA +L+ MP E N + G+LL
Sbjct: 415 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 474
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+ K
Sbjct: 475 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 534
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 535 VPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 577
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A+ +F + + +LI + P EA+ L+ M +KPD + + AC +
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT-- 145
G +H ++ + G + ++LI +YA +G A Q+F + V++W
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 146 -----------------------------TMIAGLALHGLGREALDMFSRMERARVKPNE 176
TMI G A+ G EAL +F +M VKP E
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T +++LSAC H+G ++ G + IE ++D+ + G + A ++
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNR-IEVNSIVGTALVDMYAKCGKISLATQVFN 357
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
M + W +++A I+G+V+ + + + + +EP++ AILS
Sbjct: 358 AME-SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 231/347 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G++N+A LFE M +KNV++W +I+GY+Q P+EA+ LF MQ + +K
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD A+++ L ACA A+E G+ IH Y + G + V + L+D+YAK G + A ++
Sbjct: 421 PDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKL 480
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M + V++WTTMI +HG G +AL +FS+M+ K + I F AIL+AC H GLV
Sbjct: 481 FERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLV 540
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +YF MKS YG+ PK+E Y C++DLLGRAG+L EA +++ M E +A +WG+LL
Sbjct: 541 DQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLG 600
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++ELGE A +HL +L+P N+G Y +LSNIYA RW + K+RK+M++ GVKK
Sbjct: 601 ACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQ 660
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS + V + V F+ GD +HP +++Y +L + QM+ A ++ N
Sbjct: 661 PGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPN 707
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 147/262 (56%), Gaps = 5/262 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G++N A LFE M ++V SW +I GY+ Q +EA+ F RMQV +K
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M++ L ACA L A+E G+ IH Y + G + + NAL++MYAK G + A ++
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M K+V+ W +I+G + HG EAL +F M+ +KP+ +++L AC H +
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G++ R G E + ++D+ + G + A+KL RMP E + W +++
Sbjct: 440 EQGKQIHG-YTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMIL 497
Query: 253 ASNIYGDVELGECALQHLIKLE 274
A I+G GE AL K++
Sbjct: 498 AYGIHGH---GEDALALFSKMQ 516
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G L NAR +F+ M +++V+SW +IAGY+Q QP EA+ LF MQV +KP+ +
Sbjct: 165 YTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTL 224
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ + CA L A+E G+ IH Y + G+ + V + N L++MYAK G + A ++FE M
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI 284
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V +W +I G +L+ EAL F+RM+ +KPN IT +++L AC H+ +E G++
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI 344
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
R G E ++++ + G + A KL RMP + N W ++++ + +G
Sbjct: 345 HG-YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHG 402
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
N + W I GY + N+A+ L+ +MQ + PD++ L+ + AC ++ G +H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
I G + V + AL MY K G + A QVF+ M + V++W +IAG + +G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
EAL +FS M+ +KPN T ++++ C H+ +E G++ + R GIE + +
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ-IHCYAIRSGIESDVLVVNGL 262
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+++ + G + A KL RMP + A W +++
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIGG 296
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 235/350 (67%), Gaps = 2/350 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--E 69
W T++ GYAK+ + AR +F+ M K++ +W LI+GY Q +P EA+ +FR +Q+
Sbjct: 412 WTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKS 471
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+PD++ +L+ LSACAQLGA+++GEWIH YI++ + L +LIDMY+KSG + KA
Sbjct: 472 GARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKA 531
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++VF ++ NK V W+ MIAGLA+HG G A+++F M+ +VKPN +TF +L AC H
Sbjct: 532 IEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHS 591
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G+R F+ M+ YG+ PK + Y CM+D+LGRAG+L+EA K + MP +A++WG+
Sbjct: 592 GLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGA 651
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G++EL E A L+++EP N G Y +LSN+YA G W ++R+ MRD G+
Sbjct: 652 LLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGL 711
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
KK GCS IE+ VHEF+ GD +HP +Y L +I +++ ++ N
Sbjct: 712 KKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVAN 761
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 156/297 (52%), Gaps = 40/297 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N+++ YA G L+ A +FE++ K+++SW +++ G+ Q P++A+ LF RM+ E
Sbjct: 279 NSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEG 338
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P+ + M++ +SACA+ + LG + +YI++ + + + NA IDM+ K G++ A
Sbjct: 339 VHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIAR 398
Query: 131 QVFENMKNKSVITWTTMIAGLAL---HGLGREALDMFSR--------------------- 166
+F+NM+ + V++WTT+I G A HG+ R+ D R
Sbjct: 399 GLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKE 458
Query: 167 ---------MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
+ ++ +P+++T ++ LSAC +G +++G +K + I+
Sbjct: 459 ALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK-KERIQLNRNLATS 517
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ID+ ++G +++A ++ + + +W +++A ++G GE A++ + ++
Sbjct: 518 LIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGR---GEAAIELFLDMQ 570
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDE 75
A ++ L+ AR +F+ + + N+ SW LI A P +++ +F RM ++ P++
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
+ A A+ +G+ +H + V + N+LI YA G + A VFE
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300
Query: 136 MK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
++ NK +++W +M+ G G +ALD+F RM V PN +T ++++SAC +
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
LGR+ + + R + + ID+ + G ++ A L M
Sbjct: 361 LGRKVCDYI-DRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 231/345 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y K G++ AR++F+ M EKN++SW+++I GYA P EA+ LF +M E +K
Sbjct: 248 TALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK 307
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD AM+ L +CA+LGA+ELG+W N I L ALIDMYAK G++ +A +V
Sbjct: 308 PDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV 367
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M+ K + W I+GLA+ G ++AL +F +ME++ +KP+ TF+ +L AC H GLV
Sbjct: 368 FRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLV 427
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRRYFN M+ + + P+IE YGCM+DLLGRAG L EA +L++ MP EANA +WG+LL
Sbjct: 428 EEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLG 487
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++ D +L E L+ LI LEP +SGNY +LSNIYA +W E+ KIR +M + GVKK+
Sbjct: 488 GCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKI 547
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PG S+IEV VH+F+ GDTSHP +++Y L ++ +K A ++
Sbjct: 548 PGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYV 592
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 141/248 (56%), Gaps = 2/248 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+++ Y K G ++NA +F+ + +KN SWT I+GY + + EAI +FRR+ ++P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D +++ LSAC + G + GEWI YI + G+ V + AL+D Y K G + +A VF
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M K++++W++MI G A +GL +EALD+F +M +KP+ + +L +C +G +E
Sbjct: 268 DGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
LG N++ ++ + +ID+ + G + A ++ R M + + +W + ++
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGMR-KKDRVVWNAAISG 385
Query: 254 SNIYGDVE 261
+ G V+
Sbjct: 386 LAMSGHVK 393
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G+ N + + + E N+ + T+I G D E+I ++ M+ E + PD L
Sbjct: 56 GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA++ ELG +H+ + + G + +LI++Y K G I A +VF+++ +K+
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFA 175
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+WT I+G G REA+DMF R+ ++P+ + + +LSAC G + G + +
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG-EWIDEY 234
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASN 255
+ G+ + ++D G+ G ++ A + M E N W S++ ASN
Sbjct: 235 ITENGMVRNVFVATALVDFYGKCGNMERARSVFDGM-LEKNIVSWSSMIQGYASN 288
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + + GL+ L N ++ G + ++ + K ++ + TMI GL L+
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+E+++++ M + + P+ TF +L AC V ELG + +++ + G E
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV-VKAGCEADAFVKI 147
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
+I+L + G++ A K+ +P + N A W + I G V +G+C
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIP-DKNFASW-----TATISGYVGVGKC 190
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 236/348 (67%), Gaps = 3/348 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ GYA+ G +++AR +F+ M E++V W L+ GY Q + EA+ LF MQ V
Sbjct: 291 WTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMV 350
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+I M+ LSAC+QLGA+E+G W+H+YI++ ++ V L L+DMY+K G I KA++
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIR 410
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + K+ +TWT MI+GLA HG A+ F RM ++P+EITFI +LSACCH GL
Sbjct: 411 VFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGL 470
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+ +F++M S+Y +E K++ Y CM+DLLGRAGYL EAE L+ MP E +A +WG+L
Sbjct: 471 VKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALF 530
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K+R +MR +GV+K
Sbjct: 531 FACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 590
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+PGCS IE++ VHEF+ D SH D +Y L +I Q+ EH N
Sbjct: 591 VPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQI---EHTAN 635
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 149/286 (52%), Gaps = 34/286 (11%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAM 78
A + AR LF+ ++++SW TLI GY + P EA+ +F RM + V PDE+ M
Sbjct: 166 AVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTM 225
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +S AQL +ELG +H Y+E +G+ V L N ++DMY K G + +A VFE +
Sbjct: 226 IGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDK 285
Query: 139 KSVITWTTMIAGLALHGL-------------------------------GREALDMFSRM 167
K++++WTTMI G A GL G+EAL +F M
Sbjct: 286 KTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDM 345
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ A V+P++IT + +LSAC +G +E+G + + R + + ++D+ + G
Sbjct: 346 QEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRR-VSLSVMLGTNLVDMYSKCGN 404
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+++A ++ + +P E NA W ++++ +G ++ Q +I+L
Sbjct: 405 IEKAIRVFKEIP-EKNALTWTAMISGLANHGHADVAIKYFQRMIEL 449
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ + +PD + L ACA+L G + + G + V + NA + A +
Sbjct: 113 LRSARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMA 172
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSAC 186
+A ++F+ + +++W T+I G G+ REAL+MF RM V P+E+T I ++S
Sbjct: 173 EARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGS 232
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ +ELGRR ++S +G+ + ++D+ + G L+ A+ +
Sbjct: 233 AQLRDLELGRRLHGYVES-HGVRCTVRLMNVVMDMYIKCGDLERAKSVF 280
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 241/356 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK G ++ AR LF+ M ++V++W+ +I+GY+Q + EA+ LF MQ N+
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI M++ LS+CA LGA+E G+W+H +I++ + V L AL+D YAK G + +++V
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+V++WT +I GLA +G G++AL+ F M V+PN++TFI +LSAC H GLV
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F M +GIEP+IE YGCM+D+LGRAG ++EA + ++ MP + NA IW +LLA
Sbjct: 444 DEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++ +VE+GE +L+ LI LEP +SG+Y +LSNIYA +GRW ++ K+R M++ G+KK
Sbjct: 504 SCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKT 563
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS IE+ +HEF A D H + +Y + + Q+K A ++ N L+++
Sbjct: 564 PGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAE 619
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 159/276 (57%), Gaps = 6/276 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G++ AR +F+ M+E+NV +W ++ AGY + E + LF M +++
Sbjct: 163 NTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIR 222
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DE+ +++ L+AC +L +ELGEWI+ Y+E+ GL L +L+DMYAK G++ A ++
Sbjct: 223 FDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRL 282
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V+ W+ MI+G + REALD+F M++A + PNEIT ++ILS+C +G +
Sbjct: 283 FDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGAL 342
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ +F I K R + + ++D + G ++ + ++ +MP + N W L+
Sbjct: 343 ETGKWVHFFIKKKRMKL--TVTLGTALMDFYAKCGSVESSIEVFGKMPVK-NVLSWTVLI 399
Query: 252 A--ASNIYGDVELGECALQHLIKLEPHNSGNYAILS 285
ASN G L L +EP++ +LS
Sbjct: 400 QGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLS 435
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ A ++F + E + ++ +I G+ P+EAI LF+ M +V+PDE L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C++L A+ GE IH I + G + + N LI MYA G++ A +VF+ M ++V TW
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
+M AG G E + +F M ++ +E+T +++L+AC + +ELG + N
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWINRYVE 252
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ ++D+ + G + A +L +M + W ++++
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMIS 299
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ G A G A F LM EK NV
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEK-------------------------------NV 423
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P+++ + LSAC+ G V+ G + + +G+ + ++D+ ++G I +A
Sbjct: 424 EPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAF 483
Query: 131 QVFENMK-NKSVITWTTMIAGLALHG---LGREAL 161
Q +NM + + W T++A +H +G E+L
Sbjct: 484 QFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESL 518
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 233/336 (69%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+GY G+L+ AR LFE K+V+ WT +I GY Q + +EA+ LF+ MQ++ V
Sbjct: 26 WTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRV 85
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ ++A L+ CAQ+GA+E G WIH YI++ G+ + +LI+MY+K G I KAL+
Sbjct: 86 KPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALR 145
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F ++ K TWT++I GLA++G +AL++FS+M++ P+E+TFI +LSAC H GL
Sbjct: 146 IFCGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGL 205
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WG 248
VE GR +FN M S Y IEPK+E YGC+IDLLGRAG L EAE+L++++ N I +G
Sbjct: 206 VEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEELIKKIVNANNEIIVPLYG 265
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLL+A IY +V++GE + L+K+E +S + +L+NIYA GRW + ++R+ M+D+G
Sbjct: 266 SLLSACRIYKNVQMGERVAEQLVKIESRDSSVHTLLANIYASAGRWVDVNRVRREMKDLG 325
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
VKK+PGCS IEV VHEF+ G+ S + +Y +L
Sbjct: 326 VKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYSML 361
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-LGR------------------- 158
MY K G + A ++F+ M +K+VI WT+M++G +G L +
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 159 -----------EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
EA+ +F M+ RVKP++ +A+L+ C +G +E G + + G
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEK-G 119
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
I +I++ + G +++A ++ + E + A W S++ + G
Sbjct: 120 IPVDAVVGTSLIEMYSKCGCIEKALRIFCGLR-EKDTATWTSIICGLAMNG 169
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 235/357 (65%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
+S + WN M+ G+A+ D+ A LF M+E++V+SWT +IAGYAQ +E++ +F
Sbjct: 71 MSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVF 130
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
+M+ +K D M + LSACA L A+ELG H Y+ Q G + + +AL+DMYAKS
Sbjct: 131 NQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKS 190
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + A QVF+ M ++ ++W ++I G A HG G +A+ +F +M +A +KPNEI+F+ +L
Sbjct: 191 GSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVL 250
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC H GLV GR YFN+M YGI P + Y CMIDLLGRAG L EAE + MP E +
Sbjct: 251 SACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPD 310
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
++WG+LL A I+G+ EL + +HL+ +E +G Y +LSNIYA G+W+++ K+RK+
Sbjct: 311 VSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKL 370
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
M+D GV K PG S+IEV +H FVAG+TSHP +++ L ++ +MK A ++ N+
Sbjct: 371 MKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNK 427
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 159/344 (46%), Gaps = 55/344 (15%)
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-- 126
+ VKP++ + + ACA + ++E G+ HNYI + G + V + AL+ MYA+ G +
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 127 -----------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLG 157
KAL++F M + V++WT +IAG A +G G
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
E+L++F++M + +K + ++LSAC + +ELGR+ F+ + G I
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVVGSA 182
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD----VELGECALQHLIKL 273
++D+ ++G +++A ++ +MP + N W S++ +G V L E LQ IK
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK- 240
Query: 274 EPHNSGNYAILSNIYAILGRWNES-GKIRKVMRDMGVKKMPGCSY----IEVSKR----- 323
P+ +LS + G NE G + ++ G+ +P S+ I++ R
Sbjct: 241 -PNEISFVGVLSAC-SHTGLVNEGRGYFNLMTQNYGI--VPDVSHYTCMIDLLGRAGCLD 296
Query: 324 -VHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAEHLQNEFSGV 364
F+ G PD +L C+I+G + A+ + G+
Sbjct: 297 EAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGM 340
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 236/361 (65%), Gaps = 4/361 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ---V 68
WN+++ + G ++ AR LF +M E+NVISW+ +I GY + Q EA+ LFR MQ V
Sbjct: 133 WNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGV 192
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+V+P+E M L+AC +LGA+E G+W H YI++ G+ V L ALIDMYAK G + K
Sbjct: 193 NDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEK 252
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A VF N+ NK V+ W+ MI+GLA+HGL E + +FS+M V+PN +TF+A+ AC
Sbjct: 253 ATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACV 312
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV G+ Y M Y I P I+ YGCM+DL GRAG ++EA +++ MP E + +W
Sbjct: 313 HGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVW 372
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LL+ S ++GD+E E AL+ LI+LEP NSG Y +LSN+YA GRW + +R +M M
Sbjct: 373 GALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETM 432
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 367
G+KK+PGCS IEV +HEF GD SHP+ +++ +L +I ++K ++ N +L+
Sbjct: 433 GIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDL 492
Query: 368 D 368
D
Sbjct: 493 D 493
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 43 WTTLIAGYAQMD-QP----NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
W TLI + Q QP + I++F RM+ V+PD L + A + LG +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN---------------------- 135
H I ++GL + +LI MY+ G +G A QVF+
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 136 ---------MKNKSVITWTTMIAGLALHGLGREALDMFSRMERA---RVKPNEITFIAIL 183
M ++VI+W+ MI G G +EAL +F M+ V+PNE T +L
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+AC +G +E G ++ + + G+ + +ID+ + G +++A + + +
Sbjct: 207 AACGRLGALEHG-KWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 265
Query: 244 AAIWGSLLAASNIYGDVELGEC 265
W ++++ ++G E EC
Sbjct: 266 VMAWSAMISGLAMHGLAE--EC 285
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 234/348 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++++G+ ++G ++ AR LF+ M E++ +SWT +I GY Q Q EA+ +FR MQ V
Sbjct: 192 WTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKV 251
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ DE M++ ++ACAQLGA+E GEW Y+ ++G+ + NAL+DMY+K G I +AL
Sbjct: 252 RADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALG 311
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + TWT +I GLA++G G EA++MF RM R P+E+TFI +L+AC H GL
Sbjct: 312 VFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGL 371
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F M YGI P + +GC+IDLLGRAG L+EA + + MP N+AIWG+LL
Sbjct: 372 VDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLL 431
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G+ E+G+ A +HL++L+ N Y +LSN+YA RW + ++R+V+ + G+KK
Sbjct: 432 AACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKK 491
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IE++ +HEF+AGD SHP +Y L K+ +K A ++ +
Sbjct: 492 EPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPD 539
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+++V YA GD AR L + + + W LI+G+ + Q + F M
Sbjct: 58 SSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRT 117
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------ 123
V P + + LSAC + + LG +H + G+ + + NALIDMYA+
Sbjct: 118 GVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAA 177
Query: 124 -------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
G++ +A +F+ M + ++WT MI G G R
Sbjct: 178 WELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFR 237
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
EAL+MF M+ ++V+ +E T +++++AC +G +E G + I SR+GI+ +
Sbjct: 238 EALEMFREMQFSKVRADEFTMVSVVTACAQLGALETG-EWARIYMSRHGIKMDTFVGNAL 296
Query: 219 IDLLGRAGYLQEAEKLLRRM 238
+D+ + G +Q+A + + M
Sbjct: 297 VDMYSKCGSIQQALGVFKEM 316
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 66 MQVENVKPDEIA---MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
M +PD +L A++A A+ GAV G+ +H ++ ++G+ + ++L+ MYA
Sbjct: 9 MLARGARPDAYTFPPLLKAVTAAAERGAV--GDAVHAHVVKFGMELNAHVASSLVLMYAA 66
Query: 123 SGKIGKA---LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
G A L + + + W +I+G R + F M R V P +T+
Sbjct: 67 RGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTY 126
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
I +LSAC + LG + + + G+ P ++ +ID+ + A +L M
Sbjct: 127 ITVLSACGKDKYIWLGMQVHKCVVAS-GVLPDLKVGNALIDMYAECSEMDAAWELFEGME 185
Query: 240 FEANAAIWGSLLAASNIYGDVE 261
N W S+++ G V+
Sbjct: 186 VR-NTVSWTSVISGFLRLGQVD 206
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/345 (46%), Positives = 230/345 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
MV+ AK+GD+ AR LF+ M+ K+ I+W +I+GY Q Q EA++LF MQ E VK +
Sbjct: 183 MVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVN 242
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E++M++ LSAC+ LGA++ G W H YIE+ L + L ALIDMYAK G + KA++VF
Sbjct: 243 EVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
MK K+V TW++ I GLA++G G + L++FS M++ V+PNEITF+++L C VGLVE
Sbjct: 303 GMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEE 362
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR++F M YGIEP++E YGCM+DL GRAG+L EA + MP + WG+LL A
Sbjct: 363 GRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNAC 422
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
IY ++E+GE A + +++LE N G Y +LSNIYA W+ +R+ M GV+K PG
Sbjct: 423 KIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPG 482
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
CS IEV VHEF GD SHP + + +L +I+ ++K + ++ N
Sbjct: 483 CSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVAN 527
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 35/263 (13%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPDEIAMLAA 81
+L+ + + + + ++ ++I +++ P+ + + R+ + PD
Sbjct: 58 NLHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFL 117
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA-------------------- 121
+ AQL A G +H +YG + + LI MYA
Sbjct: 118 VRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDL 177
Query: 122 -----------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 170
K G +G A ++F+ M +K I W MI+G G REAL +F+ M+R
Sbjct: 178 VCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQRE 237
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
VK NE++ +++LSAC H+G ++ G R+ + R + + +ID+ + G + +
Sbjct: 238 GVKVNEVSMVSVLSACSHLGALDQG-RWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNK 296
Query: 231 AEKLLRRMPFEANAAIWGSLLAA 253
A ++ M E N W S +
Sbjct: 297 AMEVFWGMK-EKNVYTWSSAIGG 318
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
R+ ++ YAK G++N A +F M EKNV +W++ I G A + + LF
Sbjct: 275 RMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSL 334
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ ++V+P+EI ++ L C+ +G VE G + + + YG+ + ++D+Y ++G
Sbjct: 335 MKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAG 394
Query: 125 KIGKALQVFENM 136
+ +AL +M
Sbjct: 395 HLDEALNFINSM 406
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY ++GD+ AR F++M +++ +SW +IAGYAQ EA+ +F ++ +
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ ALS CA + A+ELG+ IH + G T + NAL+ MY K G I +A
Sbjct: 391 SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE ++ K V++W TM+AG A HG GR+AL +F M+ A VKP+EIT + +LSAC H GL
Sbjct: 451 TFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF M YG+ P + Y CMIDLLGRAG L+EA+ L+R MPF+ AA WG+LL
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A + + K+EP NSG Y +LSN+YA GRW ++ K+R MRD+GV+K
Sbjct: 571 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQK 630
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++EV ++H F GD SHP+ +R+Y L +++ +M+
Sbjct: 631 VPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY + L +AR LF+LM EK+V+SW +L++GYAQ +EA +F M +N
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN- 172
Query: 72 KPDEIAMLAALSACAQLGAVE-------------LGEW---IHNYIEQYGLNTI------ 109
I+ L+A G +E L W + ++ + L
Sbjct: 173 ---SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 110 VPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P+ N +I YA+ G + +A ++F+ + V TWT M++G +G+ EA F
Sbjct: 230 MPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + NE+++ A+++ +++ R F M R I + MI G+
Sbjct: 290 DEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCR-----NISSWNTMITGYGQ 340
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
G + +A K MP + + W +++A G E
Sbjct: 341 IGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 38/143 (26%)
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ GL++ G YF M Y + P + Y CMIDLLGR L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LL AS I+G+ ELGE A Q K+ P NSG I K MRD+
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG--------------------ISK-MRDV 857
Query: 308 GVKKMPGCSYIEVSKRVHEFVAG 330
GV+K+PG S+ EV ++H F G
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG 880
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 49/242 (20%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ + + G ++A +F M ++ +S+ +I+GY + + N A LF +M
Sbjct: 52 WNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----- 106
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +L W N ++ Y ++ ++G A +
Sbjct: 107 -PER----------------DLFSW-----------------NVMLTGYVRNCRLGDARR 132
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K V++W ++++G A +G EA ++F M + N I++ +L+A H G
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGR 188
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E F KS + + + C++ R L +A L +MP +A W +++
Sbjct: 189 IEEACLLFE-SKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMI 242
Query: 252 AA 253
+
Sbjct: 243 SG 244
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY ++GD+ AR F++M +++ +SW +IAGYAQ EA+ +F ++ +
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ ALS CA + A+ELG+ IH + G T + NAL+ MY K G I +A
Sbjct: 391 SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE ++ K V++W TM+AG A HG GR+AL +F M+ A VKP+EIT + +LSAC H GL
Sbjct: 451 TFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF M YG+ P + Y CMIDLLGRAG L+EA+ L+R MPF+ AA WG+LL
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A + + K+EP NSG Y +LSN+YA GRW ++ K+R MRD+GV+K
Sbjct: 571 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQK 630
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++EV ++H F GD SHP+ +R+Y L +++ +M+
Sbjct: 631 VPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY + L +AR LF+LM EK+V+SW +L++GYAQ +EA +F M +N
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN- 172
Query: 72 KPDEIAMLAALSACAQLGAVE-------------LGEW---IHNYIEQYGLNTI------ 109
I+ L+A G +E L W + ++ + L
Sbjct: 173 ---SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 110 VPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P+ N +I YA+ G + +A ++F+ + V TWT M++G +G+ EA F
Sbjct: 230 MPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + NE+++ A+++ +++ R F M R I + MI G+
Sbjct: 290 DEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCR-----NISSWNTMITGYGQ 340
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
G + +A K MP + + W +++A G E
Sbjct: 341 IGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 49/242 (20%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ + + G ++A +F M ++ +S+ +I+GY + + N A LF +M
Sbjct: 52 WNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----- 106
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +L W N ++ Y ++ ++G A +
Sbjct: 107 -PER----------------DLFSW-----------------NVMLTGYVRNCRLGDARR 132
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K V++W ++++G A +G EA ++F M + N I++ +L+A H G
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGR 188
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E F KS + + + C++ R L +A L +MP +A W +++
Sbjct: 189 IEEACLLFE-SKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMI 242
Query: 252 AA 253
+
Sbjct: 243 SG 244
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 218/334 (65%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y K G++ A LFE ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 271 KIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 330
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+E+G WIH YI + G+ +LIDMYAK G I
Sbjct: 331 GESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIE 390
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF+++ N+S+ +W MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 391 AAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 450
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F MK Y I PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 451 HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIW 510
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A +Y +VELGE Q+LIK+EP N G+Y +LSNIYA GRWNE KIR ++ D
Sbjct: 511 CSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDK 570
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 571 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ +F+ + K+V+SW +I+GYA+ EA+ LF+ M NV
Sbjct: 172 YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV 231
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M++ +SACAQ ++ELG +H++I+ +G + + + NALID+Y K G++ A
Sbjct: 232 RPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACG 291
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 351
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK----LLRRMPFEANAAI 246
+E+GR + I K G+ +ID+ + G ++ A++ +L R NA I
Sbjct: 352 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 411
Query: 247 WG 248
+G
Sbjct: 412 FG 413
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 33/257 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++FE + E N++ W T+ G+A P A+ L+ M + P+ L +CA+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--------- 138
A G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175
Query: 139 ----------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
K V++W MI+G A G +EAL++F M + V+P+E
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T ++++SAC +ELGR+ + + +G ++ +IDL + G ++ A L
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFE 294
Query: 237 RMPFEANAAIWGSLLAA 253
+ ++ + W +L+
Sbjct: 295 GLSYK-DVISWNTLIGG 310
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---IGKALQVFEN 135
L+ L C L ++ + IH + + GL+ + LI+ S + A+ VFE
Sbjct: 6 LSLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
++ +++ W TM G AL AL ++ M + PN TF +L +C G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 196 RR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
++ + +++K Y ++ + + +I + + G L++A K+
Sbjct: 123 QQIHGHVLKLGYDLDLYV--HTSLISMYVQNGRLEDARKVF 161
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 220/334 (65%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G+L A LF+ ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 271 KIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRS 330
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
KP+++ ML+ LSACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 331 GEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 390
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF++M N+S+ +W MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 391 AAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 450
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y + PK+E YGCMIDL G +G +EAEK++ M E + IW
Sbjct: 451 HSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIW 510
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q+LIK+EP N G+Y +LSNIYA RWNE K R ++ D
Sbjct: 511 CSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDK 570
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 571 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 148/248 (59%), Gaps = 2/248 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A +F+ + K+V+SW I+GYA+ EA+ LF++M NV
Sbjct: 172 YTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNV 231
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ LSACAQ G++ELG +H++I +G + + NALID+Y+K G++ A
Sbjct: 232 RPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACG 291
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + NK VI+W T+I G L +EAL +F M R+ KPN++T ++ILSAC H+G
Sbjct: 292 LFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGA 351
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K G+ +ID+ + G ++ A+++ M + + W ++
Sbjct: 352 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAM 410
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 411 IFGFAMHG 418
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 161/351 (45%), Gaps = 61/351 (17%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F+ + E ++ W T+ G+A P A+ L+ M + P+ L +CA+
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV--------------- 132
A + G+ +H + ++G + + ++ +LI MY ++G++ A +V
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 133 ----------------FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
F+ + K V++W I+G A G +EAL++F +M + V+P+E
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T + +LSAC G +ELGR+ + + +G ++ +IDL + G L+ A L +
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWIND-HGFGXNLKIVNALIDLYSKCGELETACGLFQ 294
Query: 237 RMPFEANAAIWGSLLAAS---NIYGDVELGECALQHLIKL--EPHNSGNYAILS---NIY 288
+ + W +L+ N+Y + L Q +++ +P++ +ILS ++
Sbjct: 295 GLS-NKDVISWNTLIGGYTHMNLYKEALL---LFQDMLRSGEKPNDVTMLSILSACAHLG 350
Query: 289 AI-LGRW------------NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 326
AI +GRW + +R + DM K C IE +++V +
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK----CGDIEAAQQVFD 397
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A+ VF+ ++ ++ W TM G AL AL ++ M + PN TF +L +C
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ G++ + ++K +G + + + +I + + G L++A+K+ + + +
Sbjct: 116 SXAFKEGQQLHGQVLK--FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR-DVVSY 172
Query: 248 GSLLAASNIYGDVE-----LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
+L+ G +E E ++ ++ SG YA G + E+ ++ K
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISG--------YAETGNYKEALELFK 224
Query: 303 VMRDMGVKK--------MPGCSY---IEVSKRVHEFV 328
M V+ + C+ IE+ ++VH ++
Sbjct: 225 KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI 261
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 224/338 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ YAK G+L+ AR LF+ M E++ + W +I GY Q PNEA+ LFRRM KP+
Sbjct: 143 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 202
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ +L+ LSAC QLGA+E G W+H+YIE G+ V + AL+DMY+K G + A VF+
Sbjct: 203 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 262
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +K V+ W +MI G A+ G +EAL +F M R + P ITFI ILSAC H G V
Sbjct: 263 KIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE 322
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G FN MK YGIEPKIE YGCM++LLGRAG++++A +L++ M E + +WG+LL A
Sbjct: 323 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 382
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G + LGE ++ L+ NSG Y +LSNIYA +G W+ ++R +M+D GVKK PG
Sbjct: 383 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 442
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IEV+ +VHEF+AG +HP +Y +L +ING +K
Sbjct: 443 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 480
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 37/271 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA +G L+ + ALF +V WT +I G+A +A+ + +M + V+P+
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L C +E G+ +H+ + G ++ + + L+D+YA+ G + A Q+F+ M
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 139 KSVIT-------------------------------WTTMIAGLALHGLGREALDMFSRM 167
KS+++ W MI G +G+ EAL +F RM
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+A+ KPNE+T +++LSAC +G +E GR + +++ GI+ + ++D+ + G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCGS 253
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
L++A + ++ + + W S++ + G
Sbjct: 254 LEDARLVFDKID-DKDVVAWNSMIVGYAMXG 283
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 231/341 (67%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
TMV+ AK GD+ AR LF+ M +++ +SW +IAGYAQ Q EA+ LF+ MQ++ VK
Sbjct: 181 TMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKV 240
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+E++M++ ++AC LGA++ G+W H YIE+ + V L AL+DMY K G + +AL+VF
Sbjct: 241 NEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVF 300
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
M K+V TW+T I GLA++G G++ L++FS M+ + PNEITFI++L C VG V+
Sbjct: 301 WEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVD 360
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR +F+ MK +GIEP++E YGCM+DL GRAG L+EA + MP + +A WG+LL A
Sbjct: 361 EGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNA 420
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+Y ++ELGE A + LI++E N G Y LSNIYA G W+ +R+ M+ G+ K+P
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLP 480
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
GCS +EV+ VHEF +GD SHP +D + + +I+ ++K A
Sbjct: 481 GCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLA 521
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 38/266 (14%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSAC 85
+ + + + + + ++I Y++ P+++ + ++ N + PD + C
Sbjct: 62 SNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTC 121
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY------------------------- 120
AQ A E G +H + ++G + + LI MY
Sbjct: 122 AQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQT 180
Query: 121 ------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
AK G IG A +F++M + ++W MIAG A G REAL++F M+ VK
Sbjct: 181 TMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKV 240
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
NE++ I++++AC H+G ++ G ++ + + I+ + ++D+ + G + A K+
Sbjct: 241 NEVSMISVVTACTHLGALDQG-KWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKV 299
Query: 235 LRRMPFEANAAIWGSLLA--ASNIYG 258
M E N W + + A N YG
Sbjct: 300 FWEMN-EKNVYTWSTAIGGLAMNGYG 324
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 219/334 (65%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y K G++ A LFE ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 256 KIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 315
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+E+G WIH YI + G+ +LIDMYAK G I
Sbjct: 316 GESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIE 375
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF+++ N+S+ +W MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 376 AAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 435
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F MK Y I PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 436 HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIW 495
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q+LIK+EP N G+Y +LSNIYA GRWNE KIR ++ D
Sbjct: 496 CSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDK 555
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 556 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ +F+ + K+V+SW +I+GYA+ EA+ LF+ M NV
Sbjct: 157 YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV 216
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M++ +SACAQ ++ELG +H++I+ +G + + + NALID+Y K G++ A
Sbjct: 217 RPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACG 276
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK----LLRRMPFEANAAI 246
+E+GR + I K G+ +ID+ + G ++ A++ +L R NA I
Sbjct: 337 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 396
Query: 247 WG 248
+G
Sbjct: 397 FG 398
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 33/257 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++FE + E N++ W T+ G+A P A+ L+ M + P+ L +CA+
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--------- 138
A G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 139 ----------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
K V++W MI+G A G +EAL++F M + V+P+E
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T ++++SAC +ELGR+ + + +G ++ +IDL + G ++ A L
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFE 279
Query: 237 RMPFEANAAIWGSLLAA 253
+ ++ + W +L+
Sbjct: 280 GLSYK-DVISWNTLIGG 295
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 232/345 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK G++ AR++F+ M EK+++SW +I GYA P EAI LF +MQ ENVK
Sbjct: 252 TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSACA+LGA+ELGEW+ +++ L ALID+YAK G + +A +V
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEV 371
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K + W +I+GLA++G + + +F ++E+ +KP+ TFI +L C H GLV
Sbjct: 372 FKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLV 431
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRRYFN M + + P IE YGCM+DLLGRAG L EA +L+R MP EANA +WG+LL
Sbjct: 432 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ D +L E AL+ LI+LEP NSGNY +LSNIY+ +W+E+ K+R M + ++K
Sbjct: 492 ACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKP 551
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS+IEV VHEF+ GD HP +++Y L ++ +MK A ++
Sbjct: 552 PGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYV 596
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 157/272 (57%), Gaps = 4/272 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK G L +A +F+ + +KNV+SWT +I+GY + + EAI +FRR+ N+
Sbjct: 151 TSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA 210
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSAC QLG + GEWIH I + G+ V + +L+DMYAK G + KA V
Sbjct: 211 PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSV 270
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K +++W MI G AL+GL +EA+D+F +M+R VKP+ T + +LSAC +G +
Sbjct: 271 FDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGAL 330
Query: 193 ELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG ++ ++ + P + +IDL + G + A ++ + M E + +W +++
Sbjct: 331 ELGEWVSGLVDRNEFLYNPVLGT--ALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAII 387
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAI 283
+ + G V++ + KL GN I
Sbjct: 388 SGLAMNGYVKISFGLFGQVEKLGIKPDGNTFI 419
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
D N R LF + + N+ W T+I G D ++AI + M+ E P+ L
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
ACA+L ++LG IH + + G + V + +L+ +YAK G + A +VF+++ +K+V++
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
WT +I+G G REA+DMF R+ + P+ T + +LSAC +G + G + +
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG-EWIHKCI 239
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G+ + ++D+ + G +++A + MP E + WG+++ + G
Sbjct: 240 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYALNG 293
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 234/348 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++++G + G ++ AR LF+ M E++ I+WT +I GY Q+ + +A+ FR MQ+ V
Sbjct: 230 WTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKV 289
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ DE M++ ++ACAQLGA+E GEW Y+ + G+ V + NALIDMY+K G I +AL
Sbjct: 290 RADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALD 349
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M N+ TWT +I GLA++G G EA+DMF RM RA P+E+TF+ +L+AC H GL
Sbjct: 350 VFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGL 409
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F M Y I P + YGC+ID+LGRAG L+EA + +MP + N+ IWG+LL
Sbjct: 410 VDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLL 469
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A+ +YG+ E+GE A + L++L+P NS Y +LSN+YA RW + +IR+++ + G+KK
Sbjct: 470 ASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKK 529
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IE++ +HEFVA D SHP +Y L + ++ A ++ +
Sbjct: 530 EPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
+ W LI+G+ + + + F M + + ++ LSAC + + LG +H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 101 IEQYGLNTIVPLNNALIDMYA-------------------------------KSGKIGKA 129
+ + G+ + NAL+DMYA +SG++ +A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F++M + I WT MI G G R+AL+ F M+ +V+ +E T +++++AC +
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
G +E G + I R GI+ + +ID+ + G ++ A + + M
Sbjct: 307 GALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 119/283 (42%), Gaps = 20/283 (7%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ AR+L + + + + ++ ++G+ EA+ + RM +PD + L A
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGHG----AEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 85 CAQLGAVELGEW-----IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN---- 135
A + IH ++ ++G+ + ++LI MYA G A V E
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+ + W +I+G G + F M RA +T++++LSAC + LG
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG 180
Query: 196 RR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
+ + +++S G+ P ++D+ G + A L M + A+ W S+++
Sbjct: 181 MQVHKRVLES--GVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMAS-WTSVISGL 237
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 297
G V+ H + ++ + + + Y +GR+ ++
Sbjct: 238 VRSGQVDRARDLFDH---MPERDTIAWTAMIDGYVQVGRFRDA 277
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 238/357 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MVAGY K GD+ +AR LF+ M EKN+++W+ +I+GYA+ ++AI L+ +Q E V
Sbjct: 182 WTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGV 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E M++ +++CA LGA+ELGE H+YI + + + L AL+DMYA+ G I KA+
Sbjct: 242 HANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIW 301
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + + ++WTT+IAG A+HG +AL+ FSRME+A + P EITF A+LSAC H GL
Sbjct: 302 VFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGL 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G F MK Y IEP++E YGCM+DLLGRAG L EAEK + MP + NA IWG+LL
Sbjct: 362 VERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ + E+ E A + LI+L+P +SG Y +LSNIYA +W IR++M++ GV K
Sbjct: 422 GACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVK 481
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG + E+ +VH+F GD +HP+ ++ ++ +I G+++ A + N + + D
Sbjct: 482 PPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDID 538
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 130/282 (46%), Gaps = 38/282 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A +F + N+ + + I G++ P+++ + + + + PD + + A
Sbjct: 63 LDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKA 122
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C Q G++++G H I ++G ++ V + N+L+ MY+ G I A VF + V++W
Sbjct: 123 CTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSW 182
Query: 145 TTMIAGLALHGLGREALDMFSRMERAR-------------------------------VK 173
T+M+AG G A +F +M V
Sbjct: 183 TSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVH 242
Query: 174 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
NE ++++++C H+G +ELG R + I++++ + + ++D+ R G + +A
Sbjct: 243 ANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGT--ALVDMYARCGSIDKAI 300
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ ++P +A W +L+A ++G E AL++ ++E
Sbjct: 301 WVFDQLPGR-DALSWTTLIAGFAMHG---YAEKALEYFSRME 338
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 218/334 (65%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNTM+ GYA GD+ LFE M E+NV SW LI GYA E + F+RM ++
Sbjct: 296 WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGL 355
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P++ ++ LSACA+LGA++LG+W+H Y G + + NALIDMY+K G I A+
Sbjct: 356 VVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAM 415
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE+M K +ITW +MI GLA HG G +AL +F +M+ KP+ ITFI +L +C H+G
Sbjct: 416 EVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLG 475
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G YFN M + Y I P+IE YGCM+DL GRAG L A + ++RMP EA+A IW +L
Sbjct: 476 LVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 535
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A IY +++L E ALQ LI LEP N NY +LSNIY LGRW + +++ +MRD G K
Sbjct: 536 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSK 595
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS IEV+ V EF + D H +Y +L
Sbjct: 596 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVL 629
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 122/250 (48%), Gaps = 17/250 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ Y+ + +A LF M E+N+++WT++I+GY ++ + L RR+ +
Sbjct: 204 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR----VALARRLFDLAPE 259
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN---YIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
D + +S ++G ++ + + Y + NT +++ YA +G +
Sbjct: 260 RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNT-------MLNGYANNGDVEAC 312
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCH 188
Q+FE M ++V +W +I G A +G E L F RM V PN+ T + +LSAC
Sbjct: 313 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 372
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G ++LG ++ ++ + G + I +ID+ + G ++ A ++ M + + W
Sbjct: 373 LGALDLG-KWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLK-DLITWN 430
Query: 249 SLLAASNIYG 258
S++ +G
Sbjct: 431 SMICGLATHG 440
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V + + + +AR LF+ + V W + GY E + LF +M+ +V+P+
Sbjct: 105 VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPN 164
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L +CA++GA GE IH + + GL + LID+Y+ IG A ++F
Sbjct: 165 CFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFV 224
Query: 135 NMKNKSVITWTTMIAGLALH---GLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
M ++++ WT+MI+G L L R D+ ER V N ++S +G
Sbjct: 225 GMLERNIVAWTSMISGYILCNRVALARRLFDLAP--ERDVVLWN-----IMVSGYIEIGD 277
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ R+ F+ M R + M++ G ++ E+L MP E N W L+
Sbjct: 278 MKAARKLFDTMPYR-----DTMSWNTMLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLI 331
Query: 252 AA 253
Sbjct: 332 GG 333
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 218/335 (65%), Gaps = 1/335 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
FWNT++ GYA G++ LFE M E+N+ SW LI GYA E + F+RM E
Sbjct: 329 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 388
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P++ ++ LSACA+LGA++LG+W+H Y E GL V + NAL+DMYAK G I A
Sbjct: 389 DVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 448
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VF M K +I+W T+I GLA+H G +AL++F +M+ A KP+ ITFI IL AC H+
Sbjct: 449 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM 508
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YF M Y I P+IE YGCM+D+L RAG L++A +R+MP EA+ IW
Sbjct: 509 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAG 568
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A IY +VEL E ALQ LI+LEP N NY +LSNIY GRW + +++ MRD G
Sbjct: 569 LLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGF 628
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 629 KKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 663
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 53/283 (18%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A + + AR LF+ + + N+ W ++ GYAQ + E + LF +M+ +++P+
Sbjct: 144 ATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFP 203
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +C ++ A+ GE +H ++ + G + LIDMY+ G +G A ++F M +
Sbjct: 204 VVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER 263
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V+ WT+MI G L + D+ S RR F
Sbjct: 264 NVVAWTSMINGYIL------SADLVS-----------------------------ARRLF 288
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++ R + + M+ G + EA KL MP + W ++L G+
Sbjct: 289 DLAPER-----DVVLWNIMVSGYIEGGDMVEARKLFXEMP-NRDVMFWNTVLKGYATNGN 342
Query: 260 VELGECALQHLIKLEPHNS--------GNYAILSNIYAILGRW 294
VE AL+ L + P + G YA + +LG +
Sbjct: 343 VE----ALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSF 381
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ Y+ G + +A +F M E+NV++WT++I GY A LF ++
Sbjct: 238 TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF------DLA 291
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ +L + + ++ E + E N V N ++ YA +G + +
Sbjct: 292 PERDVVLWNIMVSGYIEGGDMVEARKLFXEM--PNRDVMFWNTVLKGYATNGNVEALEGL 349
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
FE M +++ +W +I G A +GL E L F RM + V PN+ T + +LSAC +G
Sbjct: 350 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA 409
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++LG ++ ++ G++ + ++D+ + G ++ A + R M
Sbjct: 410 LDLG-KWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 455
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ + A ++ A Q+F+ + + ++ W +M G A RE + +F +M+ ++PN
Sbjct: 139 LVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPN 198
Query: 176 EITFIAILSACCHV-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
TF +L +C + L+E + + ++K + P + +ID+ G + +A K+
Sbjct: 199 CFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGT--TLIDMYSAGGTVGDAYKI 256
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDV 260
M FE N W S++ + D+
Sbjct: 257 FCEM-FERNVVAWTSMINGYILSADL 281
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 218/335 (65%), Gaps = 1/335 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
FWNT++ GYA G++ LFE M E+N+ SW LI GYA E + F+RM E
Sbjct: 266 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 325
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P++ ++ LSACA+LGA++LG+W+H Y E GL V + NAL+DMYAK G I A
Sbjct: 326 DVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 385
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VF M K +I+W T+I GLA+H G +AL++F +M+ A KP+ ITFI IL AC H+
Sbjct: 386 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM 445
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YF M Y I P+IE YGCM+D+L RAG L++A +R+MP EA+ IW
Sbjct: 446 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAG 505
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A IY +VEL E ALQ LI+LEP N NY +LSNIY GRW + +++ MRD G
Sbjct: 506 LLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGF 565
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 566 KKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 600
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 53/283 (18%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A + + AR LF+ + + N+ W ++ GYAQ + E + LF +M+ +++P+
Sbjct: 81 ATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFP 140
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +C ++ A+ GE +H ++ + G + LIDMY+ G +G A ++F M +
Sbjct: 141 VVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER 200
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V+ WT+MI G L + D+ S RR F
Sbjct: 201 NVVAWTSMINGYIL------SADLVS-----------------------------ARRLF 225
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++ R + + M+ G + EA KL MP + W ++L G+
Sbjct: 226 DLAPER-----DVVLWNIMVSGYIEGGDMVEARKLFHEMP-NRDVMFWNTVLKGYATNGN 279
Query: 260 VELGECALQHLIKLEPHNS--------GNYAILSNIYAILGRW 294
VE AL+ L + P + G YA + +LG +
Sbjct: 280 VE----ALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSF 318
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ Y+ G + +A +F M E+NV++WT++I GY A LF ++
Sbjct: 175 TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF------DLA 228
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ +L + + ++ E + E N V N ++ YA +G + +
Sbjct: 229 PERDVVLWNIMVSGYIEGGDMVEARKLFHEM--PNRDVMFWNTVLKGYATNGNVEALEGL 286
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
FE M +++ +W +I G A +GL E L F RM + V PN+ T + +LSAC +G
Sbjct: 287 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA 346
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++LG ++ ++ G++ + ++D+ + G ++ A + R M
Sbjct: 347 LDLG-KWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ + A ++ A Q+F+ + + ++ W +M G A RE + +F +M+ ++PN
Sbjct: 76 LVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPN 135
Query: 176 EITFIAILSACCHV-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
TF +L +C + L+E + + ++K + P + +ID+ G + +A K+
Sbjct: 136 CFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGT--TLIDMYSAGGTVGDAYKI 193
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 294
M FE N W S++ + D+ + + L L P +L NI ++ +
Sbjct: 194 FCEM-FERNVVAWTSMINGYILSADL----VSARRLFDLAPERD---VVLWNI--MVSGY 243
Query: 295 NESGKI---RKVMRDM 307
E G + RK+ +M
Sbjct: 244 IEGGDMVEARKLFHEM 259
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 228/341 (66%), Gaps = 1/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV GYA+ G+++ A+ LF+ M +++ ISW +I+GYAQ Q EA+ LF +M+ +
Sbjct: 342 WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGG 401
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A+ ALS+CA++ A+ELG+ +H + + G T NAL+ MY K G I +A
Sbjct: 402 ILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFD 461
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE++ K +++W TMIAG A HG G+EAL +F M + +KP+++T + +LSAC H GL
Sbjct: 462 VFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGL 520
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YFN M YGI + Y CMIDLLGRAG L EA L++ MPF +AA WG+LL
Sbjct: 521 VDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+GD ELGE A + + ++EP NSG Y +LSN+YA GRW E ++R MRD GVKK
Sbjct: 581 GASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKK 640
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++E+ + H F GD SHP+ +R+Y L +++ ++K
Sbjct: 641 VPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELK 681
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 44/290 (15%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY K G+L+ ARALF M EK+V+SW +++G+AQ EA +F +M V+N
Sbjct: 125 WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183
Query: 72 KPDEIAMLAALSACAQLGAVELG--------EW--------IHNYIEQYGLNTI------ 109
EI+ LSA Q G +E +W + Y+ + L+
Sbjct: 184 ---EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 110 VPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P+ N +I YA++G + +A ++FE + + V WT M++G +G+ EA +F
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + NE+++ A+++ +E R F+ M SR + M+ +
Sbjct: 301 EEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQ 351
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
G + +A+ L MP + + W ++++ Y E AL IK++
Sbjct: 352 CGNIDQAKILFDEMP-QRDCISWAAMISG---YAQSGQSEEALHLFIKMK 397
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M++GY + AR +FE M ++++ISW +++GY + + A LF +M ++V
Sbjct: 94 YNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A LS AQ G VE I +Q + + N L+ Y ++G+I A +
Sbjct: 154 ----VSWNAMLSGFAQNGFVEEARKI---FDQMLVKNEISW-NGLLSAYVQNGRIEDARR 205
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++ + +++W ++ G +A +F RM ++I++ +++ GL
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP----VRDKISWNIMITGYAQNGL 261
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ RR F + R + + M+ + G L EA ++ MP E N W +++
Sbjct: 262 LSEARRLFEELPIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMI 315
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
A Y + E A + ++ N+ ++ + YA G
Sbjct: 316 AG---YVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 218/334 (65%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNTM+ GYA GD+ LFE M E+NV SW LI GYA E + F+RM ++
Sbjct: 254 WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGL 313
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P++ ++ LSACA+LGA++LG+W+H Y G + + NALIDMY+K G I A+
Sbjct: 314 VVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAM 373
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE+M K +ITW +MI GLA HG G +AL +F +M+ KP+ ITFI +L +C H+G
Sbjct: 374 EVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLG 433
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G YFN M + Y I P+IE YGCM+DL GRAG L A + ++RMP EA+A IW +L
Sbjct: 434 LVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 493
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A IY +++L E ALQ LI LEP N NY +LSNIY LGRW + +++ +MRD G K
Sbjct: 494 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSK 553
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS IEV+ V EF + D H +Y +L
Sbjct: 554 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVL 587
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 122/250 (48%), Gaps = 17/250 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ Y+ + +A LF M E+N+++WT++I+GY ++ + L RR+ +
Sbjct: 162 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR----VALARRLFDLAPE 217
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN---YIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
D + +S ++G ++ + + Y + NT +++ YA +G +
Sbjct: 218 RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNT-------MLNGYANNGDVEAC 270
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCH 188
Q+FE M ++V +W +I G A +G E L F RM V PN+ T + +LSAC
Sbjct: 271 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 330
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G ++LG ++ ++ + G + I +ID+ + G ++ A ++ M + + W
Sbjct: 331 LGALDLG-KWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLK-DLITWN 388
Query: 249 SLLAASNIYG 258
S++ +G
Sbjct: 389 SMICGLATHG 398
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V + + + +AR LF+ + V W + GY E + LF +M+ +V+P+
Sbjct: 63 VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPN 122
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L +CA++GA GE IH + + GL + LID+Y+ IG A ++F
Sbjct: 123 CFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFV 182
Query: 135 NMKNKSVITWTTMIAGLALH---GLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
M ++++ WT+MI+G L L R D+ ER V N ++S +G
Sbjct: 183 GMLERNIVAWTSMISGYILCNRVALARRLFDLAP--ERDVVLWN-----IMVSGYIEIGD 235
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ R+ F+ M R + M++ G ++ E+L MP E N W L+
Sbjct: 236 MKAARKLFDTMPYR-----DTMSWNTMLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLI 289
Query: 252 AA 253
Sbjct: 290 GG 291
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 227/342 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY K G++ ARALF+ M +K+ +SW+ +I+GYAQ D+ E + LF+ MQ+E
Sbjct: 358 WNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT 417
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE +++ +SAC L A++ G+WIH YI + GL + L LI+MY K G + AL+
Sbjct: 418 KPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALE 477
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ ++ K V TW +I GLA++GL ++L FS M+ V PNEITF+A+L AC H+GL
Sbjct: 478 VFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGL 537
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+FN M + I P I+ YGCM+DLLGRAG L+EAE+L+ MP + + WG+LL
Sbjct: 538 VDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALL 597
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A YGD E GE + L++L P + G +LSNIYA G W + ++R +MR GV K
Sbjct: 598 GACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVK 657
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PGCS IE RVHEF+AGD +HP + + +L ++ ++K
Sbjct: 658 TPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKL 699
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 143/280 (51%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ + K G++ A LF M +K+++SW+ LI+ Y Q + EA+ LF+ M +
Sbjct: 227 NSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIM 286
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
DE+ +L+ LSAC++L V G+ +H + + G+ T V L NALI MY+
Sbjct: 287 VDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 346
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
K G+I KA +F++M +K ++W+ MI+G A E L
Sbjct: 347 FSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETL 406
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ KP+E ++++SAC H+ ++ G ++ + + G++ I +I++
Sbjct: 407 VLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKINIILGTTLINM 465
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G +++A ++ + + E + W +L+ + G V+
Sbjct: 466 YMKLGCVEDALEVFKGLE-EKGVSTWNALILGLAMNGLVD 504
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
++N + +F + N T++ GY Q + P +AI +++ M NV D
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
+C+ A G+ I +++ + G ++ V + N LI+MYA G + A +VF+ +++
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 144 WTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W +M+AG L G EA D++ RM ER + N + I + G VE + FN M
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASN--SMIVLFGK---KGNVEEACKLFNEM 249
Query: 203 KSR 205
K +
Sbjct: 250 KQK 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 41/249 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G+L++AR +F+ + +++SW +++AGY + EA ++ RM NV
Sbjct: 165 NTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV- 223
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
IA +N++I ++ K G + +A ++
Sbjct: 224 ---IA-----------------------------------SNSMIVLFGKKGNVEEACKL 245
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK K +++W+ +I+ + + EAL +F M + +E+ +++LSAC + +V
Sbjct: 246 FNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVV 305
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ ++ + GIE + +I + + A+KL + W S+++
Sbjct: 306 ITGKLVHGLV-VKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC-LDQISWNSMIS 363
Query: 253 ASNIYGDVE 261
G++E
Sbjct: 364 GYVKCGEIE 372
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/348 (47%), Positives = 235/348 (67%), Gaps = 3/348 (0%)
Query: 12 WNTMVAGYAKVGDLNN-ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN MV+GY +GD N AR LF+ M KN+++W+T+I GYA+ QP +A+ LF R + ++
Sbjct: 201 WNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQD 260
Query: 71 VKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+KPDE +L +SAC+QLG ++ E IHNY+ L+ + + +LIDMYAK G I KA
Sbjct: 261 IKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDL-RVFTSLIDMYAKCGSIEKA 319
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
LQ+FE K ++ ++TMIA LA HGLGR+A+ +F +M+RA +KP+ +TF+ +L+AC H
Sbjct: 320 LQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHG 379
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ GR+YF M +GI+P + Y C++DLLGR G L+EA L+R MP ++ +WG+
Sbjct: 380 GLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGA 439
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA ++ +V+L E A L K+EP NSGNY +LSNIYA GRW K+R +R+ V
Sbjct: 440 LLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRV 499
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+K G S+IE+S VHEFV GD SH D D + IL + MK + +L
Sbjct: 500 RKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYL 547
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 46/245 (18%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY ++ AR F+ M E+NV+SWT++I GY + EA LF M V+
Sbjct: 139 WNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVK-- 196
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK-IGKAL 130
+L W N ++ Y G A
Sbjct: 197 --------------------DLASW-----------------NVMVSGYMDIGDYTNGAR 219
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M K+++TW+TMI G A +G +AL++F R + +KP+E + I+SAC +G
Sbjct: 220 CLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLG 279
Query: 191 LVELGRRYFNIMKSRYG--IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+++ +I+ + G + + + +ID+ + G +++A ++ M + +
Sbjct: 280 IIDAAE---SIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMF-EMAHPKDLLCYS 335
Query: 249 SLLAA 253
+++AA
Sbjct: 336 TMIAA 340
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ + +++ YAK G + A +FE+ K+++ ++T+IA A +AI LF +MQ
Sbjct: 301 RVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRA 360
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
N+KPD + L L+AC G V+ G ++ E++G+ ++D+ + G + +
Sbjct: 361 NIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEE 420
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A + NM + W ++A +H
Sbjct: 421 AYNLIRNMPIAPHSVVWGALLAACRVH 447
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N L+ +Y++ G A +VF+ + + WT++I G + EA +F +M R +
Sbjct: 39 NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
T ++L A + + G+ + E I + MI G + A K
Sbjct: 99 VLNFTISSVLKALARLTRFKGGQAVYGFAFDEM-CEKDIVSWNMMISGYGNNDRVDIARK 157
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDV 260
RMP E N W S++ GD+
Sbjct: 158 FFDRMP-ERNVVSWTSMICGYVKAGDM 183
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 223/333 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V G+A ++ AR F+ M E++ +SWT +I GY +M++ E +TLFR MQ+ NV
Sbjct: 309 WTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV 368
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M++ L+ACA LGA+ELGEW YI++ + + NALIDMY K G + KA +
Sbjct: 369 KPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKK 428
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M+ K TWT MI GLA +G G EAL MFS M A V P+EIT+I ++ AC HVGL
Sbjct: 429 IFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGL 488
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G+ +F+ M ++GI+P + YGCM+DLLGRAG+L+EA +++ MP + N+ +WGSLL
Sbjct: 489 VAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLL 548
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ +V+L E A +++LEP N Y +L NIYA +W +RK+M + G+KK
Sbjct: 549 GACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKK 608
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+PGCS +E++ V+EFVAGD SHP +Y L
Sbjct: 609 IPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKL 641
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 143/277 (51%), Gaps = 38/277 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ--VENVKPDEI 76
++ G +N AR +F++ V++W +++GY + + E+ LF M+ E V P+ +
Sbjct: 181 FSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSV 240
Query: 77 AMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
++ LSAC++L + G+ I+N YI++ + + L NALIDM+A G++ A VF+
Sbjct: 241 TLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDE 300
Query: 136 MKNKSVITWTTMIAGLA--------------------------LHGLGR-----EALDMF 164
MK + VI+WT+++ G A + G R E L +F
Sbjct: 301 MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M+ + VKP+E T ++IL+AC H+G +ELG + + I+ +ID+ +
Sbjct: 361 RDMQMSNVKPDEFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFK 419
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGD 259
G +++A+K+ M + + W +++ A+N +G+
Sbjct: 420 CGNVEKAKKIFNEMQ-KKDKFTWTAMIVGLANNGHGE 455
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 140/302 (46%), Gaps = 10/302 (3%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD+ AR +F+ + + +V W T+I GY++++ ++L++ M V N+KPD L
Sbjct: 83 GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142
Query: 83 SACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
+ A++ G+ + N+ +G L++ + + I +++ G + A ++F+ V
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILSACCHVGLVELGRRYF 199
+TW +++G E+ +F ME+ V PN +T + +LSAC + + G+ +
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
N +EP + +ID+ G + A + M + W S++ + +
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMK-TRDVISWTSIVTG---FAN 318
Query: 260 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 319
+ A ++ ++ + ++ + + Y + R+ E + + RDM + + +
Sbjct: 319 TCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKE---VLTLFRDMQMSNVKPDEFTM 375
Query: 320 VS 321
VS
Sbjct: 376 VS 377
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 56 PNEAITLFRRMQVENVKPDEI--AMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPL 112
PN +++LF + + N + ++ L C + + IH+ + GL++ + L
Sbjct: 14 PNLSLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN---QIHSQTIKTGLSSNHLFL 70
Query: 113 NNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
+I K SG + A +VF+ + SV W TMI G + + ++ M
Sbjct: 71 TKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHN 130
Query: 172 VKPNEITFIAIL 183
+KP+ TF +L
Sbjct: 131 IKPDGFTFPFLL 142
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 236/347 (68%), Gaps = 1/347 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY+++ ++ +A LF M +++ISWTT+IA Y+Q Q EA+ +F MQ +
Sbjct: 110 WNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGI 169
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M +SACA LGA++LG+ IH Y + G + V + +ALIDMYAK G + K+L
Sbjct: 170 DPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLV 229
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K++ W ++I GLA+HG EAL MFSRM+R ++KPN +TFI++L AC H GL
Sbjct: 230 VFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGL 289
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+ F M + I P+IE YGCM+DLLG+AG L++A +L+R M E N+ IWG+LL
Sbjct: 290 VEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALL 349
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ ++++ + A+ LEP+NSG Y +L N+YA + RW+E IR M+++GV+K
Sbjct: 350 GGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEK 409
Query: 312 M-PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PG S+IE+ +++H+F A D SH D +Y +L +++GQ+K + ++
Sbjct: 410 TSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYV 456
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 41/249 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y G + AR +F+ M+E++V +WTT+I+ +A+ + A LF M V N
Sbjct: 49 TALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNT- 107
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
W NA+ID Y++ + A +
Sbjct: 108 ---------------------ASW-----------------NAMIDGYSRLRNVESAELL 129
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M N+ +I+WTTMIA + + REAL +F+ M+ + P+E+T I+SAC H+G +
Sbjct: 130 FSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGAL 189
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG+ ++ G + + +ID+ + G L ++ + ++ + N W S++
Sbjct: 190 DLGKE-IHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLR-KKNLFCWNSIIE 247
Query: 253 ASNIYGDVE 261
++G E
Sbjct: 248 GLAVHGYAE 256
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V P + + AC+ + + GE +H +I +YG ++ V + AL+D Y +GKI +A
Sbjct: 5 QVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEA 64
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF+ M + V WTTMI+ A G A +F M N ++ A++ +
Sbjct: 65 RRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVR----NTASWNAMIDGYSRL 120
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAI 246
VE F+ M +R I + MI + +EA + M + +
Sbjct: 121 RNVESAELLFSQMPNR-----DIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVT 175
Query: 247 WGSLLAASNIYGDVELGE 264
++++A G ++LG+
Sbjct: 176 MATIISACAHLGALDLGK 193
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M +A+V P TF +++ AC V + G + +YG + + ++D G AG
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIW-KYGFDSHVFVQTALVDFYGNAG 59
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 286
+ EA ++ M E + W ++++ GD+ A Q ++ N+ ++ + +
Sbjct: 60 KIVEARRVFDEMS-ERDVFAWTTMISVHARTGDM---SSARQLFDEMPVRNTASWNAMID 115
Query: 287 IYAIL 291
Y+ L
Sbjct: 116 GYSRL 120
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ GD+ AR F+ M +++ ISW +IAGYAQ EA+ LF M+ +
Sbjct: 331 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 390
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + LS CA++ A+ELG+ +H + + GL + + NAL+ MY K G I A
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE ++ K V++W TMIAG A HG G+EAL +F M++ + P+++T + +LSAC H GL
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M YGI + Y CMIDLLGRAG L +A+ L++ MPFE +AA WG+LL
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A + + ++EP NSG Y +LSN+YA GRW + G++R MRD GVKK
Sbjct: 571 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 630
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++EV ++H F GD+ HP+ DR+Y L +++ +MK
Sbjct: 631 VPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 671
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F L+R L++ WN M++G + +L AR LF+ M E++V+SW +++GYAQ
Sbjct: 96 FYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQN 155
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE--------------------L 93
EA +F M +N I+ L+A Q G +E +
Sbjct: 156 GYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMM 211
Query: 94 GEWI--HNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
G ++ + ++ G+ +P N +I YA++G++ +A ++FE + V TWT
Sbjct: 212 GGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTA 271
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
M++G +G+ EA +F M + N +++ AI++ ++ R F M +
Sbjct: 272 MVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ- 326
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
+ + MI + G + +A RMP + ++ W +++A Y GE A
Sbjct: 327 ----NVSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEA 378
Query: 267 LQHLIKLE 274
L ++++
Sbjct: 379 LHLFVEMK 386
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 18/242 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++G AR LFE M ++++SW +I+G + A LF +M +V
Sbjct: 83 WNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDV 142
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A LS AQ G V+ + I + E N+I N ++ Y ++G+I A +
Sbjct: 143 ----VSWNAMLSGYAQNGYVKEAKEI--FDEMPCKNSISW--NGMLAAYVQNGRIEDARR 194
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+ + +I+W M+ G +A +F RM + +E+++ ++S G
Sbjct: 195 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGE 250
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ +R F R + + M+ + G L EA ++ MP E N+ W +++
Sbjct: 251 LLEAQRLFEESPVR-----DVFTWTAMVSGYVQNGMLDEARRVFDGMP-EKNSVSWNAII 304
Query: 252 AA 253
A
Sbjct: 305 AG 306
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 231/339 (68%), Gaps = 3/339 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+GY G L+ AR LFE ++V+ WT +I GY Q ++ ++A+ LFR MQ++ V
Sbjct: 302 WTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRV 361
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD ++A L+ CAQLG +E G+WIH YI++ + + ALI+MYAK G I K+L+
Sbjct: 362 SPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLE 421
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +K K +WT++I GLA++G +AL++F+ M + VKP++ITFI +LSAC H GL
Sbjct: 422 IFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGL 481
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WG 248
VE GR++F M + Y IEPK+E YGC+IDLLGRAG L EAE+L+ + P N I +G
Sbjct: 482 VEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYG 541
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A +G+VE+GE + L+ +E +S + +L+NIYA RW + K+R+ M+D+G
Sbjct: 542 ALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLG 601
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
VKK+PGCS +EV+ VHEF+ GD SHP+ +Y +L I
Sbjct: 602 VKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 640
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 151/280 (53%), Gaps = 39/280 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+++ YA+VG + N R +FE M +++V+SW LI+GY + + +A+ +FRRMQ + ++
Sbjct: 171 NSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSL 230
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P+E +++ LSAC L +ELG+ IH Y+ EQ G + + NAL+DMY K G + A
Sbjct: 231 RPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAR 288
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR------------------------ 166
++F +M K+VI WT+M++G G EA ++F R
Sbjct: 289 EIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDD 348
Query: 167 -------MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
M+ RV P+ T +A+L+ C +G +E G+ I +++ I+ + +
Sbjct: 349 AVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGT--AL 406
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
I++ + G+++++ ++ + E + A W S++ + G
Sbjct: 407 IEMYAKCGFIEKSLEIFNGLK-EKDTASWTSIICGLAMNG 445
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 176/367 (47%), Gaps = 29/367 (7%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 81
+G+L+ A +F + + + +I + + +A+ LFR+++ E + PD
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
A LG V GE ++ ++ + GL + N+L+DMYA+ G++ QVFE M + V
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 142 ITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++W +I+G +A+D+F RM +++ ++PNE T ++ LSAC + ++ELG+
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
++ + G KI ++D+ + G+L A ++ MP + W S+++ G +
Sbjct: 259 YVREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIK-TVICWTSMVSGYVNCGQL 315
Query: 261 ELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK-------- 311
+ + L + P + + + N Y R++++ + R+M +K+
Sbjct: 316 D----EARELFERSPVRDVVLWTAMINGYVQFNRFDDAVAL---FREMQIKRVSPDRFTL 368
Query: 312 ---MPGCS---YIEVSKRVHEFVAGDTSHPDFDRLY-QILCKINGQMKFAEHLQNEFSGV 364
+ GC+ +E K +H ++ D + D + L ++ + F E F+G+
Sbjct: 369 VALLTGCAQLGTLEQGKWIHGYI--DENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGL 426
Query: 365 LESDVAS 371
E D AS
Sbjct: 427 KEKDTAS 433
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 218/335 (65%), Gaps = 1/335 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
FWNT++ GYA G++ LFE M E+N+ SW LI GYA E + F+RM E
Sbjct: 108 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 167
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P++ ++ LSACA+LGA++LG+W+H Y E GL V + NAL+DMYAK G I A
Sbjct: 168 DVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 227
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VF M K +I+W T+I GLA+H G +AL++F +M+ A KP+ ITFI IL AC H+
Sbjct: 228 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM 287
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YF M Y I P+IE YGCM+D+L RAG L++A +R+MP EA+ IW
Sbjct: 288 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAG 347
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A IY +VEL E ALQ LI+LEP N NY +LSNIY GRW + +++ MRD G
Sbjct: 348 LLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGF 407
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 408 KKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 442
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT-LFRRMQVE--------NVKPDEIAM 78
AR LF+ + + N+ W ++ GYAQ + E +F R V + D ++
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQSESYREIFCEMFERNVVAWTSMINGYILSADLVSA 63
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGL-----------NTIVPLNNALIDMYAKSGKIG 127
+ V + YIE + N V N ++ YA +G +
Sbjct: 64 RRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVE 123
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSAC 186
+FE M +++ +W +I G A +GL E L F RM + V PN+ T + +LSAC
Sbjct: 124 ALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSAC 183
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+G ++LG ++ ++ G++ + ++D+ + G ++ A + R M
Sbjct: 184 ARLGALDLG-KWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 234
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 236/360 (65%), Gaps = 4/360 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ---VE 69
++++ Y+ G ++ AR LF +M E+NVISW+ +I GY + Q EA+ LFR MQ V
Sbjct: 103 TSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 162
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V+P+E M L+AC +LGA+E G+W H YI++ G+ V L ALIDMYAK G + KA
Sbjct: 163 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 222
Query: 130 LQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
VF N+ NK V+ W+ MI+GLA+HGL E + +FS+M V+PN +TF+A+ AC H
Sbjct: 223 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 282
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLV G+ Y M Y I P I+ YGCM+DL GRAG ++EA +++ MP E + +WG
Sbjct: 283 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+ S ++GD+E E AL+ LI+LEP NSG Y +LSN+YA GRW + +R +M MG
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 402
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+KK+PGCS IEV +HEF GD SHP+ +++ +L +I ++K ++ N +L+ D
Sbjct: 403 IKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLD 462
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 43 WTTLIAGYAQMD-QP----NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
W TLI + Q QP + I++F RM+ V+PD L + A + LG +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H I ++GL + +LI MY+ SG + A +F M ++VI+W+ MI G G
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 158 REALDMFSRMERA---RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
+EAL +F M+ V+PNE T +L+AC +G +E G ++ + + G+ +
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHG-KWAHAYIDKCGMPVDVVL 205
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
+ID+ + G +++A + + + W ++++ ++G E EC
Sbjct: 206 GTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAE--EC 254
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 239/357 (66%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
+ +V YAK GDL AR +F+ +++K+V +W+ LI GY + ++ EA+ LFR + N+
Sbjct: 219 SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+ +LA +SACAQLG +E G W+H+YI + V LNN+LIDM++K G I A +
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++M K +I+W +M+ G ALHGLGREAL F M+ ++P+EITFI +L+AC H GL
Sbjct: 339 IFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ F +++ YG+ K E YGCM+DLL RAG L EA + +R MP + + AIWGS+L
Sbjct: 399 VQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +Y ++ELGE A + L+KLEP N G Y +LSNIYA WNE K+R++M + G++K
Sbjct: 459 GACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQK 518
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS + + H F+AGD SHP+ + +L ++ ++K A ++ + +L D
Sbjct: 519 TPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNID 575
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 144/248 (58%), Gaps = 5/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ YA GDL +AR LFE M +N + WT++I+GY + PNEA+ L+++M+ +
Sbjct: 118 TTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS 177
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M +SACA+L + +G +H++I + + L +AL++MYAK G + A QV
Sbjct: 178 PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F+ + +K V W+ +I G + EAL +F + + ++PNE+T +A++SAC +G
Sbjct: 238 FDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGD 297
Query: 192 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E GR + I +++ G + +ID+ + G + A+++ M ++ + W S+
Sbjct: 298 LETGRWVHDYITRTQKG--HSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSM 354
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 355 VNGFALHG 362
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 125/245 (51%), Gaps = 11/245 (4%)
Query: 13 NTMVAGYAKVGDLN--NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
N ++A +G L A ++F E +V++W +++ + + P A+ + M +
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
NV PD + L CA L ++G+ +H + +Y L++ + + L++MYA G +
Sbjct: 74 RNV-PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +FE M +++ + WT+MI+G + EAL ++ +ME P+E+T ++SAC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ + +G + + ++ ++ KI ++++ + G L+ A ++ ++ + +
Sbjct: 193 LKDLGVGMKLHSHIRE---MDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS-DKDVYA 248
Query: 247 WGSLL 251
W +L+
Sbjct: 249 WSALI 253
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 233/347 (67%), Gaps = 8/347 (2%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F L+ LL+ WN+++ GYAK G ++ A LF M EKN ISWTT+I+GY Q
Sbjct: 195 FKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQA 254
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
EA+ LF MQ +V+PD +++ ALSACAQLGA+E G+WIH+Y+ + + L
Sbjct: 255 GMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLG 314
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
LIDMYAK G +G+AL+VF+N++ KSV WT +I+G A HG GREA+ F M++ +K
Sbjct: 315 CVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIK 374
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
PN ITF +L+AC + GLVE G+ F M+ Y ++P IE YGC++DLL RAG L EA++
Sbjct: 375 PNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKR 434
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 293
++ MP + NA IWG+LL A I+ ++ELGE + LI ++P++ G Y +NI+A+ +
Sbjct: 435 FIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKK 494
Query: 294 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
W+++ + R++M++ GV K+PGCS I + HEF+AGD SHP+ +++
Sbjct: 495 WDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 541
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 37/267 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A+ +F+ + W +I G++ D+P ++ L++RM + + + L A
Sbjct: 94 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKA 153
Query: 85 CAQLGAVELGEWIHNYIEQYGL-NTIVPLN------------------------------ 113
C+ L A+E IH I + G N + +N
Sbjct: 154 CSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSW 213
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N++I YAK+GK+ AL +F M K+ I+WTTMI+G G+ +EAL +F M+ + V+
Sbjct: 214 NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVE 273
Query: 174 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGC-MIDLLGRAGYLQEA 231
P+ ++ LSAC +G +E G+ + + K+R ++ + GC +ID+ + G + EA
Sbjct: 274 PDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVL---GCVLIDMYAKCGDMGEA 330
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYG 258
++ + + ++ A W +L++ +G
Sbjct: 331 LEVFKNIQRKSVQA-WTALISGYAYHG 356
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 230/341 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++G K G + ARALF++M EK+++SW+ +I+GYAQ D +E + LF MQ+ +
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQI 432
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE +++ +SAC L A++ G+W+H YI + GL V L L+DMY K G + AL+
Sbjct: 433 RPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALE 492
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ K V +W +I GLA++GL +LDMFS M+ V PNEITF+ +L AC H+GL
Sbjct: 493 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 552
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F M ++GIEP ++ YGCM+DLLGRAG L EAEKL+ MP + A WG+LL
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +GD E+GE + LI+L+P + G + +LSNI+A G W + ++R +M+ GV K
Sbjct: 613 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVK 672
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS IE + VHEF+AGD +HP +++ +L ++ ++K
Sbjct: 673 TPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 713
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ K+G + A LF M EK+++SW+ LI+GY Q EA+ +F M ++
Sbjct: 242 NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 301
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI------ 126
DE+ +++ LSACA L V+ G+ IH + + G+ + V L NALI MY+ SG+I
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 127 -------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
KA +F+ M K +++W+ +I+G A H E L
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ +++P+E ++++SAC H+ ++ G ++ + + G++ + ++D+
Sbjct: 422 ALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGTTLLDM 480
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G ++ A ++ M E + W +L+ + G VE
Sbjct: 481 YMKCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 519
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 41/249 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G++ +AR LF+ + +SW +++AGY + EA +F +M N+
Sbjct: 180 NTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIV 239
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+N++I + K G++ +A ++
Sbjct: 240 A---------------------------------------SNSMIVLLGKMGQVMEAWKL 260
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K +++W+ +I+G +G+ EAL MF M ++ +E+ +++LSAC H+ +V
Sbjct: 261 FNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIV 320
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+ ++ R GIE + +I + +G + +A+KL + W S+++
Sbjct: 321 KTGKMIHGLV-IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMIS 378
Query: 253 ASNIYGDVE 261
G VE
Sbjct: 379 GCMKCGSVE 387
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+LQ+F+ ++N + W TM+ +AL ++ M + V P+ T+ ++ AC
Sbjct: 94 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA- 152
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
V L+E G + + + G + + +I++ G +++A KL P ++ W
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPV-LDSVSWN 211
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
S+LA GDVE + + P N +++ +LG+ + + K+ +M
Sbjct: 212 SILAGYVKKGDVEEAKLIFDQM----PQR--NIVASNSMIVLLGKMGQVMEAWKLFNEMD 265
Query: 309 VKKM 312
K M
Sbjct: 266 EKDM 269
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/341 (46%), Positives = 225/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY + GDL AR LF++M +++ +SW +IAGYAQ EA+ + M+ +
Sbjct: 315 WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGE 374
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ ALSACA + A+ELG+ +H + + G + NAL+ MY K G I +A
Sbjct: 375 SLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYD 434
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ +++K +++W TM+AG A HG GR+AL +F M A VKP+EIT + +LSAC H GL
Sbjct: 435 VFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGL 494
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G YF+ M YGI P + Y CMIDLLGRAG L+EA+ L+R MPFE +AA WG+LL
Sbjct: 495 TDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALL 554
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G++ELGE A + + K+EPHNSG Y +LSN+YA GRW + K+R MR +GV+K
Sbjct: 555 GASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQK 614
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S++EV ++H F GD HP+ R+Y L +++ +MK
Sbjct: 615 TPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMK 655
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 31/305 (10%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F+L+R L+ WN M+ GYA+ L +AR LF+ M EK+V+SW +++GY +
Sbjct: 80 FSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRS 139
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
+EA +F RM +N I+ L+A + G +E + + L +
Sbjct: 140 GHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEARRLFESKSDWELISC---- 191
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N L+ Y K +G A Q+F+ + + +I+W TMI+G A G +A +F E + V+
Sbjct: 192 NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF---EESPVR 248
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
+ T+ A++ A G+++ RR F+ M + + Y MI + + +
Sbjct: 249 -DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREM-----SYNVMIAGYAQYKRMDMGRE 302
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH-NSGNYAILSNIYAILG 292
L MPF N W +++ GD+ ++L + P +S ++A + YA G
Sbjct: 303 LFEEMPF-PNIGSWNIMISGYCQNGDLAQA----RNLFDMMPQRDSVSWAAIIAGYAQNG 357
Query: 293 RWNES 297
+ E+
Sbjct: 358 LYEEA 362
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
I + ++G AL VF+ M ++ +++ MI+G + A D+F +M +
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL---- 95
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
++ +L+ + R F+ M E + + M+ R+G++ EA +
Sbjct: 96 FSWNLMLTGYARNRRLRDARMLFDSMP-----EKDVVSWNAMLSGYVRSGHVDEARDVFD 150
Query: 237 RMPFEANAAIWGSLLAASNIYGDVE 261
RMP + N+ W LLAA G +E
Sbjct: 151 RMPHK-NSISWNGLLAAYVRSGRLE 174
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 240/359 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YAK G ++ AR LF+ M +++V++W+ +I+GYAQ D+ EA+ LF MQ NV
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ M++ L +CA LGA E G+W+H YI++ + V L LID YAK G I ++++V
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+V TWT +I GLA +G G+ AL+ FS M VKPN++TFI +LSAC H LV
Sbjct: 381 FKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLV 440
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR FN M+ + IEP+IE YGCM+D+LGRAG+L+EA + + MPF NA +W +LLA
Sbjct: 441 DQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLA 500
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ + ++E+ E +L+H+ +LEP +SG+Y +LSN YA++GR ++ ++R ++++ +KK+
Sbjct: 501 SCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKI 560
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVAS 371
PGCS IE+ VHEF + D H ++ L K+ Q+K ++ N LE++ S
Sbjct: 561 PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEES 619
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 140/240 (58%), Gaps = 4/240 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G + AR +F+ M E+++++W ++++GY + +E + LFR++ ++
Sbjct: 160 NTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIE 219
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++ M++ L AC +L +E+GE I YI GL L +LIDMYAK G++ A ++
Sbjct: 220 FDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKL 279
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V+ W+ MI+G A +EAL++F M++ V PNE+T +++L +C +G
Sbjct: 280 FDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAY 339
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ +F I K + + + +ID + GY+ + ++ + M F+ N W +L+
Sbjct: 340 ETGKWVHFYIKKKKMKLTVTLGTQ--LIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALI 396
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 145/279 (51%), Gaps = 10/279 (3%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ A ++F + + ++ +I G A P+ A+ LF++M ++V+ D+ + L A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C+++ A+ GE +H I + G + + N LI MYA G+IG A VF+ M +S++ W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
+M++G +GL E + +F ++ R++ +++T I++L AC + +E+G + S
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+ G+ +ID+ + G + A KL M + + W ++++ Y + +
Sbjct: 251 K-GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YAQADRCK 305
Query: 265 CALQHLIKLEPHN--SGNYAILSNIY--AILGRWNESGK 299
AL +++ N ++S +Y A+LG + E+GK
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAY-ETGK 343
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 234/347 (67%), Gaps = 1/347 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT++ GYA++ +++ A LF M +++ISWTT+I Y+Q + EA+ +F M +
Sbjct: 180 WNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGI 239
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M +SACA LGA++LG+ IH YI Q+G N V + +ALIDMYAK G + ++L
Sbjct: 240 SPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLL 299
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F ++ K++ W ++I GLA+HG EAL MF +MER ++KPN +TF+++LSAC H GL
Sbjct: 300 MFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGL 359
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E GR+ F M + I P +E YGCM+DLL +AG L+EA +L+R M E NA IWG+LL
Sbjct: 360 IEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALL 419
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-K 310
+ ++ ++E+ + A L+ LEP NSG Y +L N+ A + RW E+ KIR M++ GV K
Sbjct: 420 SGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEK 479
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+ PG S+IE+ +VH+F A D SH D +Y +L +++GQMK A ++
Sbjct: 480 RCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYV 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 12/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ + ++ A + M NV + +I G+ Q QP +A+ L+ +M NV
Sbjct: 18 NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS 77
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + AC + + E +H ++ + G ++ V + +L+D Y+ G+I ++++V
Sbjct: 78 PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V WTTM++GL G A +F M N T+ ++ + V
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP----DRNLATWNTLIDGYARLREV 193
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGS 249
++ FN M +R I + MI+ + +EA + M + +
Sbjct: 194 DVAELLFNQMPAR-----DIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMAT 248
Query: 250 LLAASNIYGDVELGE 264
+++A G ++LG+
Sbjct: 249 VISACAHLGALDLGK 263
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L N I + ++ A+ + M+ +V + MI G +AL+++ +M RA
Sbjct: 16 LMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRAN 75
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKS--RYGIEPKIEQYGCMIDLLGRAGYLQ 229
V P TF +++ AC GLV R + R G + + ++D G ++
Sbjct: 76 VSPTSYTFPSLIKAC---GLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIE 132
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
E+ ++ MP E + W ++++ GD+
Sbjct: 133 ESVRVFDEMP-ERDVFAWTTMVSGLVRVGDM 162
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 2/341 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LFE + K+VISW TLI GYA ++ EA+ +F+ M
Sbjct: 246 KLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKL 305
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ T L +LIDMYAK G I
Sbjct: 306 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIE 365
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF+ + NKS+ + MI G A+HG A D+ SRM++ ++P++ITF+ +LSAC
Sbjct: 366 AANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACS 425
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL +LGR+ F M Y IEPK+E YGCMIDLLGR+G +EAE+L+ M E + IW
Sbjct: 426 HAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIW 485
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLL A I+ ++ELGE Q L+K+EP N G+Y +LSNIYA RW++ ++R ++ D
Sbjct: 486 GSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDK 545
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
G+KK+PGCS IE+ VHEF+ GD HP +Y++L +I+
Sbjct: 546 GLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEID 586
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ M+ GYA G+++ A+ +F+ + K+V+SW +I+GYA++ + EA+ LF M +V
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M LS C G VELG IH++I+ +G + + L NALID+Y+K G++ +A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE ++ K VI+W T+I G A +EAL +F M + PN++T ++IL AC H+G
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326
Query: 192 VELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAI 246
+++GR + I K GI +ID+ + G ++ A + +L + NA I
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMI 386
Query: 247 WG 248
+G
Sbjct: 387 FG 388
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 39/304 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F+ + E N +SW T+I G+A P A+ L+ M + P+ +CA+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
A + G+ IH I +YGL + ++ +LI MYA++G + A +VF+ ++ V+++T M
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 148 IAGLALHG-----------------------------LGR--EALDMFSRMERARVKPNE 176
I G A G +GR EAL++F+ M + VKP+E
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T +LS C H G VELGR+ + + + +G ++ +IDL + G ++ A L
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDN-HGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPHNSGNYAIL---SNIYAI- 290
+ ++ + W +L+ + Q ++KL P++ +IL +++ AI
Sbjct: 270 GLQYK-DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 291 LGRW 294
+GRW
Sbjct: 329 IGRW 332
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ GD+ AR F+ M +++ ISW +IAGYAQ EA+ LF M+ +
Sbjct: 250 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 309
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + LS CA++ A+ELG+ +H + + GL + + NAL+ MY K G I A
Sbjct: 310 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 369
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE ++ K V++W TMIAG A HG G+EAL +F M++ + P+++T + +LSAC H GL
Sbjct: 370 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M YGI + Y CMIDLLGRAG L +A+ L++ MPFE +AA WG+LL
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A + + ++EP NSG Y +LSN+YA GRW + G++R MRD GVKK
Sbjct: 490 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 549
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++EV ++H F GD+ HP+ DR+Y L +++ +MK
Sbjct: 550 VPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 590
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K L +AR +F+ M E++ +SW T+I+GYAQ + EA LF V +V
Sbjct: 126 WNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 185
Query: 72 KPDEIAMLAALSACAQLG----------------AVELGEWIHNYIEQYGLNTIVPLN-- 113
A +S Q G +V I Y++ ++ L
Sbjct: 186 ----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEA 241
Query: 114 ---------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
N +I YA++G I +A F+ M + I+W +IAG A G G EAL +F
Sbjct: 242 MPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 301
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRR 197
M+R + N TF + LS C + +ELG++
Sbjct: 302 VEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 334
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
G + +L AR LF+ M E++V+SW +++GYAQ EA +F M +N I+
Sbjct: 39 GCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SIS 94
Query: 78 MLAALSACAQLGAVE--------------------LGEWI--HNYIEQYGLNTIVPLN-- 113
L+A Q G +E +G ++ + ++ G+ +P
Sbjct: 95 WNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154
Query: 114 ---NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 170
N +I YA++G++ +A ++FE + V TWT M++G +G+ EA +F M
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP-- 212
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
+ N +++ AI++ ++ R F M + + + MI + G + +
Sbjct: 213 --EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQ 265
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
A RMP + ++ W +++A Y GE AL ++++
Sbjct: 266 ARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEALHLFVEMK 305
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 158/341 (46%), Positives = 227/341 (66%), Gaps = 1/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV GYA+ G+++ A+ LF+ M +++ ISW +I+GYAQ Q EA+ LF +M+ +
Sbjct: 342 WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGG 401
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A+ ALS+CA++ A+ELG+ +H + + G T NAL+ MY K G I +A
Sbjct: 402 ILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFD 461
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE++ K +++W TMIAG A HG G+EAL +F M + +KP+++T + +LSAC H G
Sbjct: 462 VFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGF 520
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YFN M YGI + Y CMIDLLGRAG L EA L++ MPF +AA WG+LL
Sbjct: 521 VDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+GD ELGE A + + ++EP NSG Y +LSN+YA GRW E ++R MRD GVKK
Sbjct: 581 GASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKK 640
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++E+ + H F GD SHP+ +R+Y L +++ ++K
Sbjct: 641 VPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELK 681
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 44/290 (15%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY K G+L+ ARALF M EK+V+SW +++G+AQ EA +F +M V+N
Sbjct: 125 WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183
Query: 72 KPDEIAMLAALSACAQLGAVELG--------EW--------IHNYIEQYGLNTI------ 109
EI+ LSA Q G +E +W + Y+ + L+
Sbjct: 184 ---EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 110 VPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P+ N +I YA++G + +A ++FE + + V WT M++G +G+ EA +F
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + NE+++ A+++ +E R F+ M SR + M+ +
Sbjct: 301 EEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQ 351
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
G + +A+ L MP + + W ++++ Y E AL IK++
Sbjct: 352 CGNIDQAKILFDEMP-QRDCISWAAMISG---YAQSGQSEEALHLFIKMK 397
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M++GY + AR +FE M ++++ISW +++GY + + A LF +M ++V
Sbjct: 94 YNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A LS AQ G VE I +Q + + N L+ Y ++G+I A +
Sbjct: 154 ----VSWNAMLSGFAQNGFVEEARKI---FDQMLVKNEISW-NGLLSAYVQNGRIEDARR 205
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++ + +++W ++ G +A +F RM ++I++ +++ GL
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP----VRDKISWNIMITGYAQNGL 261
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ RR F + R + + M+ + G L EA ++ MP E N W +++
Sbjct: 262 LSEARRLFEELPIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMI 315
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
A Y + E A + ++ N+ ++ + YA G
Sbjct: 316 AG---YVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 224/348 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A K+GD A LF M E+NV SWT++I GYAQ + EAI LF M+ +
Sbjct: 182 WNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGL 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ ++A L ACA +G + LG IH++ + G + + N LIDMY K G + A +
Sbjct: 242 LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACR 301
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+NM+ ++V++W+ MIAGLA HG +AL +F++M VKPN +TFI IL AC H+G+
Sbjct: 302 IFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGM 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF M YGI P+IE YGCM+DL RAG LQEA + + MP N +WG+LL
Sbjct: 362 VEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALL 421
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +++L E A +HL KL+P N G Y +LSNIYA GRW + ++RK+MRD GVKK
Sbjct: 422 GGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKK 481
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S I V V+ FVAGD +HP + ++Q K+ +MK ++ N
Sbjct: 482 TPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPN 529
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 174/385 (45%), Gaps = 59/385 (15%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A+ +F+L+ V W T + +A+ D P +AI+LF R++ ++ PD L AC++
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW--- 144
L V G+ +H Y+E+ GL + + L N ++ +YA G+IG A +VF+ M + VITW
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 145 ----------------------------TTMIAGLALHGLGREALDMFSRMERARVKPNE 176
T+MI G A G +EA+D+F ME A + PNE
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+T +A+L AC +G + LGRR + +R G E I +ID+ + G L++A ++
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDF-SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
M E W +++A +G E +I N+G IL +
Sbjct: 305 NME-ERTVVSWSAMIAGLAAHGRAEDALALFNKMI-----NTGVKPNAVTFIGILHACSH 358
Query: 297 SGKIRK-------VMRDMGVKKMP-----GC-----SYIEVSKRVHEFVAGDTSHPDFDR 339
G + K + RD G+ +P GC S + + HEF+ P+
Sbjct: 359 MGMVEKGRKYFASMTRDYGI--VPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVV 416
Query: 340 LYQIL--CKINGQMKFAEHLQNEFS 362
+L CK++ +K AE S
Sbjct: 417 WGALLGGCKVHKNIKLAEEATRHLS 441
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 159/330 (48%), Positives = 219/330 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G+L+ A +F+ M EKNVISWTT+I G+ ++ EA++L ++M V +
Sbjct: 179 WNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGI 238
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD I + +LSACA LGA+E G+WIH YIE+ + L L DMY K G++ KAL
Sbjct: 239 KPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALL 298
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K V WT +I GLA+HG GREALD F++M++A + PN ITF AIL+AC H GL
Sbjct: 299 VFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGL 358
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ F M S Y I+P +E YGCM+DL+GRAG L+EA + + MP + NAAIWG+LL
Sbjct: 359 TEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALL 418
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ ELG+ + LI+L+P +SG Y L++IYA G WN+ ++R ++ G+
Sbjct: 419 NACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLN 478
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS I ++ VHEF AGD SHP +Y
Sbjct: 479 HPGCSSITLNGVVHEFFAGDGSHPHIQEIY 508
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 13 NTMVAGYAKVGDLNNA--RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
+T++ YA++ +N A R +F+ ++ N + W T++ Y+ + P A+ L+ +M +
Sbjct: 46 STLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNS 105
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK-- 128
V + L AC+ L A E + IH +I + G V N+L+ +YA SG I
Sbjct: 106 VPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAH 165
Query: 129 -----------------------------ALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
A ++F+ M K+VI+WTTMI G G+ +E
Sbjct: 166 VLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKE 225
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
AL + +M A +KP+ IT LSAC +G +E G+ I K+ I+P + GC+
Sbjct: 226 ALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVL---GCV 282
Query: 219 I-DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ D+ + G +++A + ++ + A W +++ I+G
Sbjct: 283 LTDMYVKCGEMEKALLVFSKLEKKCVCA-WTAIIGGLAIHG 322
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 159/330 (48%), Positives = 225/330 (68%), Gaps = 1/330 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN+++ GY K G+++ A LF M EKN ISWTT+I+GY Q EA+ LF MQ N
Sbjct: 179 WNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSN 238
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PD +++ +ALSAC+QLGA+E G+WIH+Y + L LIDMYAK G++ +AL
Sbjct: 239 VPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEAL 298
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+NMK KSV WT +I+G A HGLGREA+ F M+ VKPN ITF A+L+AC + G
Sbjct: 299 GVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTG 358
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ FN ++ Y ++P IE YGCM+DLLGRAG L EA + +++MP + NA IWGSL
Sbjct: 359 LVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSL 418
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ ++ELGE + LI+++ ++ G Y ++NI+A+ +W+++ + R++MR+ GV
Sbjct: 419 LKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVV 478
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
K+PGCS I + HEF+AGD SH + +
Sbjct: 479 KVPGCSAISLEGTTHEFLAGDRSHAEIQEI 508
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 47/281 (16%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
F + W +I G + DQP+ ++ L+ RM + + L AC+ L A
Sbjct: 66 FFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSA 125
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------------------- 121
+ IH +I ++G + N+LI+ YA
Sbjct: 126 FQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKG 185
Query: 122 --KSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
K+G++ AL +F M K + I+WTTMI+G G+ +EAL +F M+ + V P+ ++
Sbjct: 186 YVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVS 245
Query: 179 FIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEK 233
+ LSAC +G +E G+ Y N ++R I+ C +ID+ + G ++EA
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTR------IDSVLCCVLIDMYAKCGEMEEALG 299
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ + M ++ +W +L++ +G LG A+ ++++
Sbjct: 300 VFKNMKTKS-VQVWTALISGYAYHG---LGREAISKFLEMQ 336
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 164/347 (47%), Positives = 233/347 (67%), Gaps = 2/347 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GY K GD N AR LF+ M KN+++W+T+I GYA+ QP +A+ LF R + +++
Sbjct: 294 WGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDI 353
Query: 72 KPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE +L +SAC+QLG ++ E IHNY+ L+ + + +LIDMYAK G I KAL
Sbjct: 354 KPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDL-RVFTSLIDMYAKCGSIEKAL 412
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
Q+FE K ++ ++TMIA LA HGLGR+A+ +F +M+RA +KP+ +TF+ +L+AC H G
Sbjct: 413 QMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGG 472
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR+YF M +GI+P + Y C++DLLGR G L+EA L+R MP ++ +WG+L
Sbjct: 473 LVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGAL 532
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA ++ +V+L E A L K+EP NSGNY +LSNIYA GRW K+R +R+ V+
Sbjct: 533 LAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVR 592
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
K G S+IE+S VHEFV GD SH D D + IL + MK + +L
Sbjct: 593 KNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYL 639
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 141/291 (48%), Gaps = 32/291 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY ++ AR F+ M E+NV+SWT++I GY + EA LF M V+++
Sbjct: 170 WNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDL 229
Query: 72 KPDEIAMLAALS--ACAQLGAV-------ELGEW---IHNYIEQYGLNTI------VPLN 113
+ + + C + + G W I + + L + +P
Sbjct: 230 ASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNK 289
Query: 114 NA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
N ++D Y K+G A +F+ M K+++TW+TMI G A +G +AL++F R +
Sbjct: 290 NVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFK 349
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--IEPKIEQYGCMIDLLGRAG 226
+KP+E + I+SAC +G+++ +I+ + G + + + +ID+ + G
Sbjct: 350 EQDIKPDETFILGIISACSQLGIIDAAE---SIIHNYVGPSLLSDLRVFTSLIDMYAKCG 406
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 277
+++A ++ M + + +++AA +G LG A+ K++ N
Sbjct: 407 SIEKALQMF-EMAHPKDLLCYSTMIAALANHG---LGRDAIFLFDKMQRAN 453
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 132/274 (48%), Gaps = 48/274 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++ G + A +F+ +T+ N WT+LI GY + Q +EA +LF +M+ E +
Sbjct: 39 NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + L A A+L + G+ ++ ++ +YG + + N+++D++ + K+ A Q
Sbjct: 99 VLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQA 158
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K +++W MI+G + +R V
Sbjct: 159 FDEMCEKDIVSWNMMISG-------------YGNNDR----------------------V 183
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
++ R++F+ M R + + MI +AG + EA+ L MP + + A W +++
Sbjct: 184 DIARKFFDRMPER-----NVVSWTSMICGYVKAGDMAEAQVLFDSMPVK-DLASWNVMVS 237
Query: 253 ASNIYGDVELGECALQHLI--KLEPHNSGNYAIL 284
G +++G+C +I K+ H++G++ I+
Sbjct: 238 -----GYMDIGDCVNARIIFGKMPIHDTGSWNIM 266
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ + +++ YAK G + A +FE+ K+++ ++T+IA A +AI LF +MQ
Sbjct: 393 RVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRA 452
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
N+KPD + L L+AC G V+ G ++ E++G+ ++D+ + G + +
Sbjct: 453 NIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEE 512
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A + NM + W ++A +H
Sbjct: 513 AYNLIRNMPIAPHSVVWGALLAACRVH 539
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 224/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G + AR LF++M +++ +SW +I+GYAQ EA+ +F M+ +
Sbjct: 328 WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ ALS CA + A+ELG+ +H + + G T + NAL+ MY K G +A
Sbjct: 388 SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAND 447
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE ++ K V++W TMIAG A HG GR+AL +F M++A VKP+EIT + +LSAC H GL
Sbjct: 448 VFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGL 507
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF M Y ++P + Y CMIDLLGRAG L+EAE L+R MPF+ AA WG+LL
Sbjct: 508 IDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A + + K+EP NSG Y +LSN+YA GRW + GK+R MR+ GV+K
Sbjct: 568 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQK 627
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ G S++EV ++H F GD HP+ DR+Y L +++ +M+
Sbjct: 628 VTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM++GYA+VGDL+ A+ LF ++V +WT +++GY Q +EA F M V+N
Sbjct: 235 WNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKN- 293
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
EI+ A L+ Q + + + + +++ N +I Y ++G I +A +
Sbjct: 294 ---EISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSW----NTMITGYGQNGGIAQARK 346
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + ++W +I+G A +G EAL+MF M+R N TF LS C +
Sbjct: 347 LFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAA 406
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID--LLG---RAGYLQEAEKLLRRMPFEANAA 245
+ELG++ + ++K+ + + GC + LLG + G EA + + E +
Sbjct: 407 LELGKQVHGQVVKAGF-------ETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVV 458
Query: 246 IWGSLLAASNIYG 258
W +++A +G
Sbjct: 459 SWNTMIAGYARHG 471
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F+L+R L+ WN M+ GY + L A LF+LM +K+V+SW +++GYAQ
Sbjct: 93 FSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQN 152
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
+EA +F +M N I+ L+A G ++ + + L +
Sbjct: 153 GFVDEAREVFNKMPHRN----SISWNGLLAAYVHNGRLKEARRLFESQSNWELISW---- 204
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N L+ Y K +G A Q+F+ M + VI+W TMI+G A G +A +F+ V
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV- 263
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
T+ A++S G+V+ R+YF+ M + I Y M+ AGY+Q +
Sbjct: 264 ---FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEI-----SYNAML-----AGYVQYKKM 310
Query: 234 LLRRMPFEA----NAAIWGSLLAA 253
++ FEA N + W +++
Sbjct: 311 VIAGELFEAMPCRNISSWNTMITG 334
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 18/242 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M++GY + + AR LF+ M E+++ SW ++ GY + + EA LF M
Sbjct: 80 YNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMP---- 135
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D ++ A LS AQ G V+ + N + N+I N L+ Y +G++ +A +
Sbjct: 136 KKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH--RNSISW--NGLLAAYVHNGRLKEARR 191
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+ N +I+W ++ G + +A +F RM V I++ ++S VG
Sbjct: 192 LFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV----ISWNTMISGYAQVGD 247
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ +R FN R + + M+ + G + EA K MP + N + ++L
Sbjct: 248 LSQAKRLFNESPIR-----DVFTWTAMVSGYVQNGMVDEARKYFDEMPVK-NEISYNAML 301
Query: 252 AA 253
A
Sbjct: 302 AG 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ + + G ++A +F M ++ +S+ +I+GY + + + A LF +M
Sbjct: 49 WNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----- 103
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +L W N ++ Y ++ ++G+A +
Sbjct: 104 -PER----------------DLFSW-----------------NVMLTGYVRNRRLGEAHK 129
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K V++W M++G A +G EA ++F++M N I++ +L+A H G
Sbjct: 130 LFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGR 185
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ RR F +S+ E + + C++ + L +A +L RMP + W +++
Sbjct: 186 LKEARRLF---ESQSNWE--LISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMI 239
Query: 252 AASNIYGDV 260
+ GD+
Sbjct: 240 SGYAQVGDL 248
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 241/357 (67%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
N MV GYA+VG+L AR LF+ M +++V+SW +I+GYAQ EAI +F RM Q+ +V
Sbjct: 203 NVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDV 262
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + +++ L A ++LG +ELG+W+H Y E+ + L +AL+DMYAK G I KA+Q
Sbjct: 263 LPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQ 322
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + +VITW +I GLA+HG + + SRME+ + P+++T+IAILSAC H GL
Sbjct: 323 VFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGL 382
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +FN M + G++PKIE YGCM+DLLGRAGYL+EAE+L+ MP + + IW +LL
Sbjct: 383 VDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALL 442
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++ ++++G A + L+++ PH+SG Y LSN+YA G W+ +R +M+DM ++K
Sbjct: 443 GASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRK 502
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS+IE+ +HEF+ D SH ++ +L +I+ ++ H+ + +L+ D
Sbjct: 503 DPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMD 559
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 138/285 (48%), Gaps = 52/285 (18%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQ-MDQPNEAITLFRRMQVE-NVKPDEIAMLAA 81
D+ A ++F+ + E+N +W T+I A+ D+ +A+ +F +M E V+P++ +
Sbjct: 64 DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSV 123
Query: 82 LSACAQLGAVELGEWIHNYIEQYGL-----------------------NTI--------- 109
L ACA + + G+ +H + ++GL N +
Sbjct: 124 LKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVD 183
Query: 110 ---------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
V L N ++D YA+ G + A ++F+ M +SV++W MI+G A +
Sbjct: 184 DVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQN 243
Query: 155 GLGREALDMFSR-MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
G +EA+++F R M+ V PN +T +++L A +G++ELG ++ ++ + I
Sbjct: 244 GFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKIRIDDV 302
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++D+ + G +++A ++ R+P + N W +++ ++G
Sbjct: 303 LGSALVDMYAKCGSIEKAIQVFERLP-QNNVITWNAVIGGLAMHG 346
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 51 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 110
A M QPN A + + R+ V +K AC + ++ +H ++ + G
Sbjct: 3 ALMFQPNTA-SYYPRLDVPQIK-----------ACKSMRELK---QVHAFLVKTGQTHDN 47
Query: 111 PLNNALIDMYAKSG--KIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRM 167
+ ++ + A S IG AL VF+ + ++ W T+I LA +AL +F +M
Sbjct: 48 AIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQM 107
Query: 168 -ERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
A V+PN+ TF ++L AC + + G++ ++
Sbjct: 108 LSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLL 143
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 225/347 (64%), Gaps = 2/347 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K GD+ A LFE ++ K+V+SW TLI GY + EA+ LF+ M
Sbjct: 236 KIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRS 295
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ +L+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 296 GECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIE 355
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M +S+ +W MI G A+HG A D+FSRM RV+P++ITF+ +LSAC
Sbjct: 356 AAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS 415
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL++LGR+ F M Y + PK+E YGCMIDLLG +G +EAE+++ MP E + IW
Sbjct: 416 HSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIW 475
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A +G++EL E Q LIK+EP NSG+Y +LSNIYA GRW + ++R V+
Sbjct: 476 CSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGK 535
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
G+KK+PGCS IEV VHEF+ GD HP +Y +L +++ Q++ A
Sbjct: 536 GMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEA 582
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 147/245 (60%), Gaps = 9/245 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ GYA GD +AR +F+ +TE++V+SW +I GY + + EA+ LF+ M NV+
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIGK 128
PDE +++ +SACAQ G++ELG +H+++ + +G ++ + + NALID+Y+K G +
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +FE + K V++W T+I G L +EAL +F M R+ PN++T +++L AC H
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----N 243
+G +++GR + I K G+ + +ID+ + G ++ A ++ M + + N
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 244 AAIWG 248
A I+G
Sbjct: 374 AMIFG 378
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 46/286 (16%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N++ W T++ G+A P A+ ++ RM P+ + L +
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG----------------- 127
CA+ A E G IH + + G ++ +LI MYA++G +
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 128 --------------KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
A +VF+ + + V++W MI G +G EAL++F M R V+
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 174 PNEITFIAILSACCHVGLVELGRR---YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
P+E T ++++SAC G +ELGR+ + + +G ++ +IDL + G ++
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 231 AEKLLRRMPFEANAAIWGSLLAA---SNIYGDVEL--------GEC 265
A L + + + W +L+ +N+Y + L GEC
Sbjct: 254 AFGLFEGLSCK-DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC 298
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++ +A++G + AR LF M +K V+SWT L++GY + A+ +FR MQ+E
Sbjct: 185 WNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGF 244
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLGA+ELG WI+ Y ++G+ V + NAL++MYAK G I +ALQ
Sbjct: 245 EPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQ 304
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F M K VI+W+T I GLA HG REA+ +F M+R RV PN ITF+ +LSAC H G
Sbjct: 305 LFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAG 364
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G RY + MK YG+EP +E YGC++DLLGR+G +Q A +R MP + IWGSL
Sbjct: 365 LVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSL 424
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +GDVE A + L++LEP + GN +L+N+Y GRW E RK +R +
Sbjct: 425 LSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTR 484
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 363
K PGCS IEV V EFVAG P+ + +L + ++ E L + G
Sbjct: 485 KTPGCSMIEVDNVVREFVAGQDLGPELGGIATVLDILASKLADDEELVDSDCG 537
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 41/267 (15%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--------DEIAMLAAL 82
+F + N+ +I YAQ +A+ ++ RM P D L
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC L A LG +H ++ + G + + N+LI+MY + G + A + F+ M+ K V+
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVV 183
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARV------------------------------ 172
+W T+I+ A G R A ++F M V
Sbjct: 184 SWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEG 243
Query: 173 -KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+P++++ +A+L AC +G +ELG R+ S++G+ K+ ++++ + G ++EA
Sbjct: 244 FEPDDVSIVAVLPACAQLGALELG-RWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEA 302
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYG 258
+L M E + W + + +G
Sbjct: 303 LQLFHGMS-EKDVISWSTAIGGLAAHG 328
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 231/333 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++ GY K+G +N+AR LF+ M + ++SWTT+I GY +M +A+ +FR MQ+ +
Sbjct: 180 WNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGI 239
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI+++A L ACAQLGA+E+G+WIH Y ++ G + NALI+MYAK G I +A
Sbjct: 240 EPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWN 299
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + K VI+W+TMI GLA HG G EA+ +F M + RV PNEITF+ +L AC H GL
Sbjct: 300 LFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGL 359
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G +YF++M + Y IEP+IE YGC+IDLLGR+G L +A + +MP + ++ IW SLL
Sbjct: 360 WDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLL 419
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ I+ ++++ A++ L++LEP SGNY +L+N+YA G+W + IRK++R+ +KK
Sbjct: 420 SSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKK 479
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IEV+ V EFV+ D S P ++ IL
Sbjct: 480 TPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWIL 512
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM---QVENV 71
M+ +G ++ A LF+ + N+ ++ +I YA + AI++F +M +V
Sbjct: 48 MLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSV 107
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ + +C + LG +H + ++G + NALIDMY K G + A +
Sbjct: 108 FPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACK 167
Query: 132 VFENMKNKSVI-------------------------------TWTTMIAGLALHGLGREA 160
VFE M ++ VI +WTTMI G G +A
Sbjct: 168 VFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDA 227
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
LD+F M+ ++P+EI+ IA+L AC +G +E+G ++ ++ + G K +I+
Sbjct: 228 LDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGICNALIE 286
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + G + EA L ++ E + W +++
Sbjct: 287 MYAKCGCIDEAWNLFDQL-VEKDVISWSTMIGG 318
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 226/341 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV+GY K GD+ AR LF+ M KN+++WT +I+G+A+ EA TL+ +M+ +
Sbjct: 254 WSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGL 313
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ +++ L+ACA+ G + LG+ +H I++ + V ++NAL+DMYAK G++ KAL
Sbjct: 314 KPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALS 373
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + +++W M+ GLA+HG G +A+ +FS+M++ KP+++T IAIL AC H G
Sbjct: 374 IFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGF 433
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YFN M+ +GI P IE YGCMIDLLGR G L+EA +L++ MP E N IWG+LL
Sbjct: 434 VDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL 493
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ V L E L LI LE + GNY++LSNI+A G WN +R M+ GV+K
Sbjct: 494 GACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQK 553
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S IE+ VHEF D SHP+ D++YQIL K+ +K
Sbjct: 554 PSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLK 594
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 138/339 (40%), Gaps = 51/339 (15%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ ++ +N A +F + + NV + TLI + Q Q +A F MQ + D
Sbjct: 61 LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFAD 120
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQV 132
L AC G + + IH ++E+YG + + N+LID Y+K G +G A+++
Sbjct: 121 NFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKL 180
Query: 133 FENMKNKSVITWTTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M K +++W +MI GL G LGR
Sbjct: 181 FMEMGEKDLVSWNSMIGGLVKAGDLGR--------------------------------- 207
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
R+ F+ M R + + ++D +AG + +A L +MP E N W +++
Sbjct: 208 ---ARKLFDEMAERDAVS-----WNTILDGYVKAGEMSQAFNLFEKMP-ERNVVSWSTMV 258
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ GD+E+ K+ N + I+ + +A G E+ + M G+K
Sbjct: 259 SGYCKTGDMEMARMLFD---KMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKP 315
Query: 312 MPGC--SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
G S + V G H ++ +I C +N
Sbjct: 316 DDGTLISILAACAESGLLVLGKKVHASIKKI-RIKCSVN 353
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 227/346 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G ++ A+ LF+ M +++ +SW +IAGY+Q EA+ LF M+ E
Sbjct: 341 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG 400
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + +ALS CA + A+ELG+ +H + + G T + NAL+ MY K G I +A
Sbjct: 401 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 460
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K +++W TMIAG + HG G EAL F M+R +KP++ T +A+LSAC H GL
Sbjct: 461 LFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF+ M YG+ P + Y CM+DLLGRAG L+EA L++ MPFE +AAIWG+LL
Sbjct: 521 VDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++G+ EL E A + +EP NSG Y +LSN+YA GRW + GK+R MRD GVKK
Sbjct: 581 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 640
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PG S+IE+ + H F GD HP+ D ++ L ++ +MK A ++
Sbjct: 641 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYV 686
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 51/293 (17%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F L+R+L+ WN M+ GY + +L AR LFE M E++V SW T+++GYAQ
Sbjct: 106 FELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQN 165
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALS----------ACAQLGAVE----------L 93
++A +F RM +N +++ A LS AC G+ E L
Sbjct: 166 GCVDDARRVFDRMPEKN----DVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLL 221
Query: 94 GEWI--------HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
G ++ + + + +V N +I YA++G+I +A Q+F+ V TWT
Sbjct: 222 GGFVKKKKIVEARQFFDSMKVRDVVSW-NTIITGYAQNGEIDEARQLFDESPVHDVFTWT 280
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
M++G + + EA ++F RM + NE+++ A+L+ VE+ + F++M R
Sbjct: 281 AMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR 336
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + MI + G + EA+ L +MP + + W +++A + G
Sbjct: 337 -----NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 383
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 73/318 (22%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+ ++ W I+ Y + + +EA+ +F+RM + ++ A +S + G EL
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMP----RWSSVSYNAMISGYLRNGEFELARM 111
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+ + + + L + N +I Y ++ +GKA ++FE M + V +W T+++G A +G
Sbjct: 112 LFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167
Query: 157 GREALDMFSRMERARVKPNEITFIAILSA--------------------------CCHVG 190
+A +F RM + N++++ A+LSA C G
Sbjct: 168 VDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGG 223
Query: 191 LVEL-----GRRYFNIMKSR-----------YGIEPKIEQYGCMID----------LLGR 224
V+ R++F+ MK R Y +I++ + D
Sbjct: 224 FVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMV 283
Query: 225 AGYLQ-----EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
+GY+Q EA +L RMP E N W ++LA Y E E A + + N
Sbjct: 284 SGYIQNRMVEEARELFDRMP-ERNEVSWNAMLAG---YVQGERVEMAKELFDVMPCRNVS 339
Query: 280 NYAILSNIYAILGRWNES 297
+ + YA G+ +E+
Sbjct: 340 TWNTMITGYAQCGKISEA 357
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 220/337 (65%), Gaps = 2/337 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N + Y+K GD+ A LFE ++ K+V+SW TLI GY M+ EA+ LF+ M
Sbjct: 252 KIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 311
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 312 GESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIE 371
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M +KS+ +W MI G A+HG A D+FSRM + ++P++IT + +LSAC
Sbjct: 372 AAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACS 431
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL++LGR F + Y I PK+E YGCMIDLLG AG +EAE+++ MP E + IW
Sbjct: 432 HSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIW 491
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G++EL E Q L+++EP NSG+Y +LSNIYA GRW + +IR+V+
Sbjct: 492 CSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGK 551
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK+PGCS IE+ VHEF+ GD HP +Y++L
Sbjct: 552 GMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRML 588
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 141/242 (58%), Gaps = 6/242 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ GYA GD+ +AR +F+ +TE++V+SW +I GY + EA+ LF+ M NV+
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE +++ LSACAQ G++ELG IH + + +G + + + NA I +Y+K G + A
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASG 272
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K V++W T+I G L +EAL +F M R+ PN++T +++L AC H+G
Sbjct: 273 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 332
Query: 192 VELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAI 246
+++GR + I K G+ +ID+ + G ++ A ++ M ++ NA I
Sbjct: 333 IDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMI 392
Query: 247 WG 248
+G
Sbjct: 393 FG 394
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 32/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE E N++ W T++ G A + ++ RM P+ L +
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------------------- 125
CA+ E G IH + + G + +LI MYA++G+
Sbjct: 93 CAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSC 152
Query: 126 ------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
+ A +VF+ + + V++W MI G + EAL++F M R V+
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T +++LSAC G +ELGR ++ +G ++ I L + G ++ A
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASG 272
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + + + W +L+
Sbjct: 273 LFEGLSCK-DVVSWNTLIGG 291
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 232/333 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++G+ ++G + ARALF+ M + ++SWT +I+GY ++ +A+ +FR MQ+ +
Sbjct: 164 WNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGI 223
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE ++++ L ACA+LGA+E G+WIH + + GL + NALI+MY K G I +A Q
Sbjct: 224 EPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQ 283
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M+ + VI+W+TMI GLA HG REA+ +F RM++ +KPN ITF+ +LSAC H G
Sbjct: 284 LFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGF 343
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G YF+ MK + IEP+IE YG ++DLLGRAG L +A ++ +MP + ++ IWGSLL
Sbjct: 344 WEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLL 403
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ + ++E+ A++HL +LEP ++GNY +LSNIYA LG+W++ ++RK++R +KK
Sbjct: 404 SSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKK 463
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV+ EFV+GD S P ++ +L
Sbjct: 464 TPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLL 496
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 119/255 (46%), Gaps = 41/255 (16%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN---------VKPD 74
D++ A LF+ + + N + +I + I +++M E + PD
Sbjct: 35 DMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPD 94
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS----------- 123
E + ACA+LG LG+ +H ++G + + NALIDMY K
Sbjct: 95 EFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFD 154
Query: 124 --------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
G++ +A +F+ M N+++++WT +I+G G +ALD+
Sbjct: 155 EMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDV 214
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M+ A ++P+E + I++L AC +G +E G ++ ++ +R G+ + +I++
Sbjct: 215 FREMQIAGIEPDEASIISVLPACAKLGALETG-KWIHMFCARNGLLRRTCICNALIEMYT 273
Query: 224 RAGYLQEAEKLLRRM 238
+ G + +A +L +M
Sbjct: 274 KCGCIDQACQLFDQM 288
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 239/357 (66%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
+ +V YAK GDL AR +F+ +++K+V +W+ LI GY + ++ EA+ LFR + N+
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+ +LA +SACAQLG +E G W+H+YI + V LNN+LIDM++K G I A +
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++M K +I+W +M+ GLALHGLGREAL F M+ ++P+EITFI +L+AC H GL
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ F +++ YG+ K E YGCM+DLL RAG L EA + +R MP + + AIWGS+L
Sbjct: 399 VQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +Y ++ELGE A + L++LEP N G Y +LSNIYA WNE K+R++M + G++K
Sbjct: 459 GACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQK 518
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS + + H F+AGD SHP+ + +L ++ ++K ++ + +L D
Sbjct: 519 TPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNID 575
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 155/270 (57%), Gaps = 13/270 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ YA GDL +AR LFE M +N + WT++I+GY + PNEA+ L+++M+ +
Sbjct: 118 TTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS 177
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M +SACA+L + +G +H++I + + L +AL++MYAK G + A QV
Sbjct: 178 PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F+ + +K V W+ +I G + EAL +F + + ++PNE+T +A++SAC +G
Sbjct: 238 FDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGD 297
Query: 192 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E GR + I +++ G + +ID+ + G + A+++ M ++ + W S+
Sbjct: 298 LETGRWVHDYITRTQKG--HSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSM 354
Query: 251 LAASNIYGDVELGECALQ--HLIK---LEP 275
+ ++G LG AL HL++ L+P
Sbjct: 355 VNGLALHG---LGREALAQFHLMQTTDLQP 381
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 124/245 (50%), Gaps = 11/245 (4%)
Query: 13 NTMVAGYAKVGDLN--NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
N ++A +G L A ++F +V++W +++ + + P A+ + M +
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
NV PD + L CA L ++G+ +H + +Y L++ + + L++MYA G +
Sbjct: 74 RNV-PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +FE M +++ + WT+MI+G + EAL ++ +ME P+E+T ++SAC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ + +G + + ++ ++ KI ++++ + G L+ A ++ ++ + +
Sbjct: 193 LKDLGVGMKLHSHIRE---MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYA 248
Query: 247 WGSLL 251
W +L+
Sbjct: 249 WSALI 253
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 233/343 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++G+ K G++ A LF M ++V+SW +++A YAQ +PNEA+ LF +M+ V
Sbjct: 131 WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP E +++ LSACA LGA++ G +H YI + + AL+DMYAK GKI A Q
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF+A+LSAC H G+
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ + M S YGIEPK+E Y C+IDLL RAG L+EA +L+ MP E N + G+LL
Sbjct: 311 VDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALL 370
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+ K
Sbjct: 371 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 430
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE+ VH FVAGD SHP+ +++Y L +I+ ++K A
Sbjct: 431 VPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSA 473
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA DL A+ LF L ++++V+SW +I GY + + +F RM +V
Sbjct: 39 NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV- 97
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
I+ ++ A +G ++ + + + + + L + N+++ + K G + +A +
Sbjct: 98 ---ISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSW----NSMLSGFVKCGNVEEAFGL 150
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + V++W +M+A A G EAL +F +M VKP E T +++LSAC H+G +
Sbjct: 151 FSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 210
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + IE ++D+ + G + A ++ M + W +++A
Sbjct: 211 DKGLHLHTYINDNR-IEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIA 268
Query: 253 ASNIYGDVELGECALQHL--IKLEPHNSGNYAILS 285
I+G V+ + + + +EP++ A+LS
Sbjct: 269 GMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLS 303
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
+ AC + G +H ++ + G + N+LI +YA +G A Q+F ++ V
Sbjct: 7 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDV 66
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
++W MI G G +F RM V + I++ I++ VG ++ +R F+
Sbjct: 67 VSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEAKRLFDE 122
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
M R + + M+ + G ++EA L MP + W S+LA
Sbjct: 123 MPER-----NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSMLA 167
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 243/357 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M+ G+ K GD+ +AR LF+ M EKN+++W+T+I+GYAQ + ++A+ LF+ +Q + V
Sbjct: 188 WTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGV 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ +E M++ +S+CA LGA+ELGE H+Y+ + G+ + L AL+DMYA+ G I KA+
Sbjct: 248 RANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVW 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE++ + ++WT +IAGLA+HG +L F+ M A + P +ITF A+LSAC H GL
Sbjct: 308 VFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGL 367
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G + F MK + +EP++E YGCM+DLLGRAG L+EAE+ + +MP + NA +WG+LL
Sbjct: 368 VERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ + E+GE + LI+L P +SG Y +LSNIYA W + ++R++M+ G+KK
Sbjct: 428 GACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKK 487
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S IE+ RVH+F GD+SHP+ D++ ++ +I +++ A + N + + D
Sbjct: 488 PPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDID 544
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 123/268 (45%), Gaps = 33/268 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ A +F + N+ + +I G++ P++A + + Q + + PD + + +
Sbjct: 69 IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKS 128
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C +L + +G H +I ++G V + N+L+ MYA G A +F+ M V++W
Sbjct: 129 CTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188
Query: 145 T-------------------------------TMIAGLALHGLGREALDMFSRMERARVK 173
T TMI+G A + +A+++F ++ V+
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
NE ++++S+C H+G +ELG R + + + G+ + ++D+ R G + +A
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYV-VKNGMTLNLILGTALVDMYARCGSIDKAVW 307
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ +P E + W +L+A ++G E
Sbjct: 308 VFEDLP-ERDTLSWTALIAGLAMHGYSE 334
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 134/283 (47%), Gaps = 31/283 (10%)
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI---- 117
+F+ ++++N K L +L C+ L +++ IH Y+ + + V + LI
Sbjct: 10 VFKTLRLKNPK------LFSLETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCV 60
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
D + + I A ++F ++N ++ + MI G + +A + + +R + P+ +
Sbjct: 61 DPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNL 120
Query: 178 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
TF ++ +C + + +G + + +I+K +G E + ++ + G + A + +
Sbjct: 121 TFPFLVKSCTKLHCISMGSQAHGHIIK--HGFEKDVYVQNSLVHMYATFGDTEAATLIFQ 178
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
RM + + W S++ N GDV E A + ++ N ++ + + YA +++
Sbjct: 179 RM-YYVDVVSWTSMIRGFNKCGDV---ESARKLFDQMPEKNLVTWSTMISGYAQNNHFDK 234
Query: 297 SGKIRKVMRDMGVKK--------MPGCSY---IEVSKRVHEFV 328
+ ++ KV++ GV+ + C++ +E+ +R H++V
Sbjct: 235 AVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYV 277
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 220/336 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ GY++ G ++ AR +FELM E+N +SW +IA Y Q ++ +EA LF RM++ENV
Sbjct: 189 WTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 248
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D+ + LSAC LGA+E G+WIH YIE+ G+ L +IDMY K G + KA +
Sbjct: 249 VLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASE 308
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + K + +W MI GLA+HG G A+++F MER V P+ ITF+ +LSAC H GL
Sbjct: 309 VFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGL 368
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G+ YF M G++P +E +GCM+DLLGRAG L+EA KL+ MP +A + G+L+
Sbjct: 369 VEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALV 428
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+ ELGE + +I+LEPHNSG Y +L+N+YA GRW + K+RK+M D GVKK
Sbjct: 429 GACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKK 488
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
PG S IE V EF+AG +HP +Y L +I
Sbjct: 489 APGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEI 524
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+K GDLN A +F+ + + + T+ GY + I ++ RM ++V P++
Sbjct: 65 SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ AC A+E G+ IH ++ ++G N LI MY + +A +VF+NM +
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184
Query: 140 SVITWTTMIAGLALHGLG-------------------------------REALDMFSRME 168
V++WT++I G + G EA +F RM
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
V ++ ++LSAC +G +E G ++ + + GIE + +ID+ + G L
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 303
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
++A ++ +P + + W ++ ++G GE A++ ++E
Sbjct: 304 EKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEME 345
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y K G L A +F + +K + SW +I G A + AI LF+ M+ E
Sbjct: 288 KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGK 128
V PD I + LSACA G VE G+ Y+ E GL + ++D+ ++G + +
Sbjct: 348 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 407
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG 155
A ++ M N ++ +HG
Sbjct: 408 ARKLINEMPVNPDAGVLGALVGACRIHG 435
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 233/353 (66%), Gaps = 1/353 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M++GYAK+G + +AR +F+ M EK+++ W+ +I+GYA+ QP EA+ LF MQ +
Sbjct: 287 TAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIV 346
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I ML+ +SACA +GA+ +WIH Y ++ G +P+NNALIDMYAK G + KA +V
Sbjct: 347 PDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREV 406
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FENM K+VI+W++MI A+HG A+ +F RM+ ++PN +TFI +L AC H GLV
Sbjct: 407 FENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLV 466
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+++F+ M + + I P+ E YGCM+DL RA +L++A +L+ MPF N IWGSL++
Sbjct: 467 EEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMS 526
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +G++ELGE A L++LEP + G +LSNIYA RW++ G +RK+M+ GV K
Sbjct: 527 ACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKE 586
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
CS IEV+ VH F+ D H D +Y+ L + Q+K + + SG+L
Sbjct: 587 KACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPST-SGIL 638
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 37/297 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++A YA G + +AR LF+ M+ ++V++W +I GY+Q + + L+ M+ +
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + LSACA G + G+ IH +I+ G + +L++MYA G + A +V
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREV 274
Query: 133 -------------------------------FENMKNKSVITWTTMIAGLALHGLGREAL 161
F+ M K ++ W+ MI+G A EAL
Sbjct: 275 YDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F+ M+R R+ P++IT ++++SAC +VG + + ++ + + G + +ID+
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGAL-VQAKWIHTYADKNGFGRTLPINNALIDM 393
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK---LEP 275
+ G L +A ++ MP N W S++ A ++GD + AL H +K +EP
Sbjct: 394 YAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDAD-SAIALFHRMKEQNIEP 448
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A +LF + L+ +++ P ++L+ ++ D + L A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
++L A+ LG IH ++G P + +ALI MYA G+I A +F+ M ++ V+T
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W MI G + + L ++ M+ + +P+ I +LSAC H G + G+ +K
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
G ++++ G + A ++ ++P
Sbjct: 245 DN-GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 232/355 (65%), Gaps = 7/355 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN++V YAK G +N+AR LF+ M E+NVISW+ LI GY + EA+ LFR MQ+
Sbjct: 130 WNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 189
Query: 71 ----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
V P++ M LSAC +LGA+E G+W+H+YI++YG+ + L ALIDMYAK G +
Sbjct: 190 NEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSL 249
Query: 127 GKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILS 184
+A +VF+ + K V ++ MI LA++GL E +FS M + + PN +TF+ IL
Sbjct: 250 ERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILG 309
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + MP E +
Sbjct: 310 ACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 369
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E +IR M
Sbjct: 370 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEM 429
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G+KK+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++ +
Sbjct: 430 EVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSD 484
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 43 WTTLIAGYAQMDQP---NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 99
W +I P + I+++ RM+ V PD L + + LG+ H
Sbjct: 26 WNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHA 85
Query: 100 YIEQYGLNTI-------------------------------VPLNNALIDMYAKSGKIGK 128
I +GL+ +P N++++ YAK+G I
Sbjct: 86 QILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINH 145
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-----VKPNEITFIAIL 183
A ++F+ M ++VI+W+ +I G + G +EALD+F M+ + V PN+ T +L
Sbjct: 146 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVL 205
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC +G +E G ++ + +YG+E I +ID+ + G L+ A+++ + + +
Sbjct: 206 SACGRLGALEQG-KWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKD 264
Query: 244 AAIWGSLLAASNIYG 258
+ +++ +YG
Sbjct: 265 VKAYSAMICCLAMYG 279
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 227/342 (66%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV YAK GDL +A LF+ M +NV+SW+ +IA Y+Q++QP EA+ LFR M V
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P + +++ LSACAQLG ++LG WI+ NYI + V L NALIDM+AK G +G+A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M ++V++W TMI A+HG EA+ +F +++ + P++ITF+ +L++C H G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GRRYF M+ Y IEP++E Y CMIDLLG+ G L+EA ++ R MP EA+ A WG+L
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++G+VE+G C L++L+P +SG Y ++S IYA +W++ +R MRD GVK
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVK 613
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS IEV + H+F+ D SH + +Y L I +K
Sbjct: 614 KNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIYFHLK 655
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 148/283 (52%), Gaps = 37/283 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
N +V YA L++A +F+ M E++V+SWTTL+ GYA+ +EA LF RM V +
Sbjct: 182 NALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGM 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------ 119
+P+ + ++AA+SA Q+G + G +H Y+ + G+ V L+NAL+DM
Sbjct: 242 RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYARE 301
Query: 120 -------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
YAK G + A Q+F++M ++V++W+ MIA + EA
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN--IMKSRYGIEPKIEQYGCM 218
+ +F M A V P + T +++LSAC +G ++LGR + I+ ++ G+ + +
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGL--TVNLGNAL 419
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
ID+ + G + EA KL M E N W +++ A ++G E
Sbjct: 420 IDMFAKCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSE 461
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL------GAVELGEWIH 98
T++ G+ + P A+ LFRR+ + + D + A+ A A G GE IH
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165
Query: 99 NYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
+ G + V + NAL+ YA + A +VF+ M + V++WTT++ G A GL
Sbjct: 166 CAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLA 225
Query: 158 REALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY----GIEPKI 212
EA +F RM ++PN +T +A +SA +GL+ F IM +Y G+ +
Sbjct: 226 DEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLA-----FGIMLHKYVTEGGVARSV 280
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
++D+ G+ G ++ A ++ M + + W S++ A GD+E E
Sbjct: 281 NLDNALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAE 331
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LF+ + +K+VISW TLI G+ M+ EA+ LF+ M
Sbjct: 233 KIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRS 292
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI + G+ L +LIDMYAK G I
Sbjct: 293 GESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIE 352
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF++M +S+ +W MI G A+HG A D+FS+M + + P++ITF+ +LSAC
Sbjct: 353 AAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACS 412
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y I PK+E YGCMIDLLG G +EA++++R MP E + IW
Sbjct: 413 HSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIW 472
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++ +VELGE Q+LIK+EP N G+Y +LSNIYA GRW++ KIR ++ D
Sbjct: 473 CSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDK 532
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
G+KK PGCS IE+ VHEF+ GD HP +Y+
Sbjct: 533 GIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYR 567
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G +NNAR LF+ ++ K+V+SW +I+GY + EA+ L++ M NV
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M+ +SACAQ G++ELG +H++IE +G + + + N LID+Y+K G++ A
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + K VI+W T+I G L +EAL +F M R+ PN++T +++L AC H+G
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAI 246
+++GR + I K G+ +ID+ + G ++ A+++ M + NA I
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373
Query: 247 WG 248
+G
Sbjct: 374 FG 375
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A ++FE + E N++ W T+ G+A A+ L+ M + P+ + L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA+ A+ G+ IH ++ + G + + +N +LI MYA++G++ A +VF+ ++ V+++
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 145 TTMIAGLALHGL-------------------------------GREALDMFSRMERARVK 173
T +I G A G +EAL+++ M + VK
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T + ++SAC G +ELGR+ + ++ +G I+ +IDL + G ++ A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIED-HGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + + + + W +L+
Sbjct: 254 LFQGLA-KKDVISWNTLIGG 272
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 227/353 (64%), Gaps = 1/353 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++ +A++G + AR LF M +K V+SWT L++GY + A+ +FR+MQ+E
Sbjct: 186 WNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGF 245
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLGA+ELG WI+ Y ++G+ + + NAL++MYAK G I +ALQ
Sbjct: 246 EPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQ 305
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F M K VI+W+T I GLA HG REA+ +F M+R RV PN ITF+ +LSAC H G
Sbjct: 306 LFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAG 365
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G RYF+ MK YG+EP +E YGC++DLLGR+G +Q A + MP + IWGSL
Sbjct: 366 LLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSL 425
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A + DV+ A + L++LEP + GN +L+N+YA GRW RK +R +
Sbjct: 426 LSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTR 485
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 363
K PGCS IEV V EFVAG+ P+ + I+ + Q+ E L + G
Sbjct: 486 KTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQLADDEELVDSDCG 538
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--------- 73
G +A +F + N+ +I YAQ +A+ ++ RM P
Sbjct: 56 GRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVG 115
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D L AC L A +LG +H ++ + G + + N+LI+MY + G + A +VF
Sbjct: 116 DRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVF 175
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV--------------------- 172
+ M+ K ++W T+I+ A G R+A ++F M V
Sbjct: 176 DGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVE 235
Query: 173 ----------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+P++++ +A+L AC +G +ELG R+ +++G+ KI ++++
Sbjct: 236 VFRQMQMEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCNKHGMLGKIYICNALMEMY 294
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G ++EA +L M E + W + + +G
Sbjct: 295 AKCGCIEEALQLFHGMS-EKDVISWSTAIGGLAAHG 329
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 219/344 (63%), Gaps = 2/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K GDL A LFE + +KNV+SW +I GY M EA+ LFRRM N+
Sbjct: 300 NGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNID 359
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+++ L+ L ACA LGA++LG+W+H Y+++ + V L +LIDMYAK G + A
Sbjct: 360 PNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAK 419
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M KS+ TW MI+G A+HG AL +FSRM P++ITF+ +L+AC H G
Sbjct: 420 RIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAG 479
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ LGRRYF+ M Y + PK+ YGCMIDL GRAG EAE L++ M + + AIW SL
Sbjct: 480 LLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSL 539
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ +EL E +HL +LEP N Y +LSNIYA GRW + KIR + D +K
Sbjct: 540 LGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMK 599
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K+PGCS IEV VHEF+ GD HP + +Y++L +I+ +++ A
Sbjct: 600 KVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKA 643
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 155/256 (60%), Gaps = 5/256 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G L+ AR LF+ + ++V+SW +I+GYAQ + EA+ F M+ V
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 72 KPDEIAMLAALSACAQLGA-VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ ML+ LSACAQ G+ ++LG W+ ++IE GL + + L N LIDMY K G + +A
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEAS 316
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+FE +++K+V++W MI G +EAL +F RM ++ + PN++TF++IL AC ++G
Sbjct: 317 NLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLG 376
Query: 191 LVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
++LG+ + + K+ ++ + + +ID+ + G L A+++ M ++ A W +
Sbjct: 377 ALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS-LATWNA 435
Query: 250 LLAASNIYG--DVELG 263
+++ ++G D LG
Sbjct: 436 MISGFAMHGHTDTALG 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 34/263 (12%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL+ A +LF+ + N + W +I G + + P A+ + M +P+E +
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK----------------- 125
+C ++ G+ +H ++ + GL ++ +LI+MYA++G+
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 126 --------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
+ +A ++F+ + + V++W MI+G A G EA+ F M RA+
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 172 VKPNEITFIAILSACCHVG-LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
V PN T +++LSAC G ++LG + ++ R G+ I +ID+ + G L+E
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR-GLGSNIRLVNGLIDMYVKCGDLEE 314
Query: 231 AEKLLRRMPFEANAAIWGSLLAA 253
A L ++ + N W ++
Sbjct: 315 ASNLFEKIQ-DKNVVSWNVMIGG 336
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +++ YAK GDL A+ +F+ M K++ +W +I+G+A + A+ LF RM E
Sbjct: 401 LWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEG 460
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
PD+I + L+AC G + LG + + I+ Y ++ +P +ID++ ++G +A
Sbjct: 461 FVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEA 520
Query: 130 LQVFENMKNKSV-ITWTTMIAGLALH 154
+ +NM+ K W +++ +H
Sbjct: 521 ETLVKNMEMKPDGAIWCSLLGACRIH 546
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 225/348 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV GY K GD+ AR LF+ M KN++SWT +++G+A+ EAI+LF +M+ +
Sbjct: 252 WSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACL 311
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D +++ L+ACA+ G + LGE IH I+ ++NAL+DMYAK G++ A
Sbjct: 312 KLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYD 371
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++KNK V++W M+ GLA+HG G +AL++F RM+ PN++T I +L AC H GL
Sbjct: 372 VFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGL 431
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G RYF+ M+ Y + P++E YGCM+DLLGR G L+EA +L+R MP NA IWG+LL
Sbjct: 432 IDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLL 491
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ VEL L HL++LEP +SGN+++LSNIYA G WN R MR +G KK
Sbjct: 492 GACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKK 551
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S IEV+ VHEF D SHP D +YQ++ + ++K E N
Sbjct: 552 PSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELKQVECFSN 599
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 41/247 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++G AK G AR +F+ M EK+ ISW T++ GY ++ + ++A LF M NV
Sbjct: 190 WNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNV 249
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W + ++ Y K+G + A
Sbjct: 250 V----------------------SW-----------------STMVLGYCKAGDMEMARM 270
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K++++WT +++G A GL REA+ +F +ME+A +K + T ++IL+AC GL
Sbjct: 271 LFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGL 330
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LG + +K+ + E ++D+ + G L A + + + W ++L
Sbjct: 331 LGLGEKIHASIKNN-NFKCTTEISNALVDMYAKCGRLNIAYDVFNDIK-NKDVVSWNAML 388
Query: 252 AASNIYG 258
++G
Sbjct: 389 QGLAMHG 395
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 13/219 (5%)
Query: 32 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 91
F + NV + T+I ++ QP++A F MQ + D L C +
Sbjct: 75 FNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWL 134
Query: 92 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQVFENM-KNKSVITWTTMI 148
+ E +H IE++G + V + N+LID Y+K G G A ++F +M + V++W +MI
Sbjct: 135 PVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMI 194
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+GLA GL EA +F M + + I++ +L VG ++ + F+ M R
Sbjct: 195 SGLAKGGLYEEARKVFDEMP----EKDGISWNTMLDGYVKVGKMDDAFKLFDEMPER--- 247
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ + M+ +AG ++ A L +MP + N W
Sbjct: 248 --NVVSWSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSW 283
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 147/328 (44%), Positives = 233/328 (71%), Gaps = 1/328 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++G+ VG + A ALF+LM + ++SWT +I+GY ++ +A+ +FR+MQ+ V
Sbjct: 188 WNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGV 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L ACAQLGA+E+G+WIH Y ++ GL + NAL++MY+K G IG+A Q
Sbjct: 248 EPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQ 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M VI+W+TMI GLA HG REA+++F RM++A+++PN ITF+ +LSAC H G
Sbjct: 308 LFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGF 367
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G YF+ M Y IEP++E YGC++D+LGRAG L +A ++ +MP + ++ IWGSLL
Sbjct: 368 WNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLL 427
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ + ++++ A++HL +LEP ++GNY +LSNIYA L +W+ ++RK+++ +KK
Sbjct: 428 SSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKK 487
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDR 339
PG S I+++ V EFV+ D S P F R
Sbjct: 488 TPGSSLIDINNVVQEFVSWDDSKP-FSR 514
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 43/322 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM------QV 68
MV K DL A LF+ + E N + +I + AI ++ M +
Sbjct: 52 MVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPES 111
Query: 69 EN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK----- 122
EN + PD + +C+ L LG+ +H ++ ++G + + + NALIDMY K
Sbjct: 112 ENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLL 171
Query: 123 ---------------------SGKIG-----KALQVFENMKNKSVITWTTMIAGLALHGL 156
SG +G KA +F+ M +++++WT MI+G G
Sbjct: 172 DAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGS 231
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL +F +M+ V+P+EI+ I++L AC +G +E+G ++ ++ R G+ K
Sbjct: 232 YADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVG-KWIHMYCDRNGLLRKTSICN 290
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL--IKLE 274
++++ + G + +A +L +M + + W +++ +G + + K+E
Sbjct: 291 ALMEMYSKCGCIGQAYQLFDQMS-KGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIE 349
Query: 275 PHNSGNYAILSNIYAILGRWNE 296
P+ +LS A G WNE
Sbjct: 350 PNGITFLGLLSAC-AHAGFWNE 370
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH ++ +Y L+ L ++D+ K+ +G A +F+ +K + + MI + +
Sbjct: 33 IHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKV 92
Query: 157 GREALDMFSRMERAR-------VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
A+ + M R + + P+ TF ++ +C + LG++ + ++G +
Sbjct: 93 YALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHL-CKFGPK 151
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC-ALQ 268
I +ID+ + L +A K+ M E +A W S+++ G V +G+
Sbjct: 152 SNITMENALIDMYTKCASLLDAHKVFDGM-VERDAISWNSIIS-----GHVGVGQMRKAG 205
Query: 269 HLIKLEPHNS-GNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 317
L L P+ + ++ + + Y LG + ++ + + M+ +GV+ +P C+
Sbjct: 206 ALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLG 265
Query: 318 -IEVSKRVHEF 327
+EV K +H +
Sbjct: 266 ALEVGKWIHMY 276
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 149/325 (45%), Positives = 233/325 (71%), Gaps = 2/325 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKN--VISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y K L++A +FE MTE++ + SWT +++GYA++ +A+ FRRMQ+
Sbjct: 201 NSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVG 260
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PDEI++++ L CAQLGA+ELG+WIH Y ++ G + + NALI+MYAK G I +
Sbjct: 261 IEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGR 320
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ MK + VI+W+TMI GLA HG REA+++F M++A+++P+ ITF+ +L+AC H G
Sbjct: 321 RLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 380
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ G RYF MK Y IEP +E YGC+++LLG +G L +A +L+++MP + ++ IWGSL
Sbjct: 381 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSL 440
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ +G++++ A++HL++LEP ++GNY +LSN+YA LG+W+ ++RK+MR +K
Sbjct: 441 LSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMK 500
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PGCS IEV V EF +GD S P
Sbjct: 501 KTPGCSSIEVDNMVQEFASGDDSKP 525
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F+LS+ + MV G+ A LF+ + + N + +I Y AIT
Sbjct: 85 FSLSQSSF-LVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAIT 143
Query: 62 LFRRM----QVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
++++M EN + PD+ + +CA L +LG+ +H ++ ++G + + N+L
Sbjct: 144 VYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSL 203
Query: 117 IDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
++MY K + A +VFE M ++ ++ +WT +++G A G +AL+ F RM+ ++P
Sbjct: 204 VEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEP 263
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+EI+ +++L C +G +ELG ++ +I + G I +I++ + G + + +L
Sbjct: 264 DEISLVSVLPDCAQLGALELG-KWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRL 322
Query: 235 LRRMPFEANAAIWGSLLAASNIYG 258
+M E + W +++ +G
Sbjct: 323 FDQMK-ERDVISWSTMIVGLANHG 345
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 216/302 (71%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GYA+ G L+ A LF+ M +K+V+ W +I GY ++ EA+ LF MQ N+
Sbjct: 249 WTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI 308
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M++ LSAC+QLGA+++G WIH+YIE++ L+ V L ALIDMYAK GKI KA+Q
Sbjct: 309 NPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQ 368
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + ++ +TWT +I+GLALHG A+ FS M V P+E+TF+ +LSACCH GL
Sbjct: 369 VFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGL 428
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ M S++ + PK++ Y CM+DLLGRAG L+EAE+L++ MP EA+A +WG+L
Sbjct: 429 VEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALF 488
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+V +GE A L++++PH+SG Y +L+N+Y W E+GK RK+MR GV+K
Sbjct: 489 FACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEK 548
Query: 312 MP 313
P
Sbjct: 549 TP 550
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 130/282 (46%), Gaps = 63/282 (22%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRR-MQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
N SW I G+ + P EA+ L++R +Q + KPD ACA+L + +G I
Sbjct: 114 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 173
Query: 98 HNYIEQYGLNTIVPLNNALI-------------DMYAKS----------------GKIGK 128
++ G ++ + ++NA+I M+ KS G +
Sbjct: 174 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLES 233
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGL-------------------------------G 157
A ++F++M NK++++WTTM+ G A GL G
Sbjct: 234 ARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRG 293
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
+EAL +F+ M+ + P+E+T ++ LSAC +G +++G + ++ ++ + +
Sbjct: 294 KEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE-KHELSLNVALGTA 352
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ID+ + G + +A ++ + +P N+ W ++++ ++G+
Sbjct: 353 LIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 393
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 218/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+G AK G + AR LF M EKN ISW+ +I GY + EA+ +F MQ E +
Sbjct: 230 WNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEI 289
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + + + L+ACA LGA++ G WIH Y+ + L AL+DMYAK G++ A
Sbjct: 290 RPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWD 349
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M+ K V TW MI GL +HG +A+++F +M++ + +PN IT + +LSAC H G+
Sbjct: 350 VFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGM 409
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R FN M+ YGIEP +E YGC++DLLGRAG L EAE+++ MP E +AA+WG+LL
Sbjct: 410 VDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALL 469
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +GDVELGE + L++LEP NSG YA+LSNIYA GRW++ +RK+M++ GVK
Sbjct: 470 GACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKT 529
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S I+ VHEF GD SHP +Y +L
Sbjct: 530 STGISMIDFDGVVHEFKMGDGSHPQMKNIYLML 562
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 14 TMVAGYAK--VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
T+V YA +LN A +FE + NV + +I G Q ++P +AI + +M + +
Sbjct: 67 TLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHA 126
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ AC A E G +H ++ + GL+ V + +A I MY G++ A +
Sbjct: 127 RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARR 186
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+ N VI + MI G G A ++F ME V ++ ++S G+
Sbjct: 187 MLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVG----SWNVMVSGMAKCGM 242
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK---LLRRMPFEANAAIWG 248
+E R FN MK + I + MID + GY +EA + +++R +
Sbjct: 243 IEEARELFNEMKEKNEI-----SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLS 297
Query: 249 SLLAASNIYGDVELG 263
S+LAA G ++ G
Sbjct: 298 SVLAACANLGALDQG 312
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 223/336 (66%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++++G ++G ++ AR LF M E++ +SWT +I GY Q + EA+ +FR MQ NV
Sbjct: 214 WTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNV 273
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE M++ ++ACAQLGA+E+GEW+ Y+ + G+ + NALIDMY+K G I +AL
Sbjct: 274 SADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALD 333
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M ++ TWT +I GLA++G G EA++MF RM P+E+TFI +L+AC H GL
Sbjct: 334 VFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGL 393
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F M+ Y I P + YGC+IDL GRAG + EA + +MP N+ IWG+LL
Sbjct: 394 VDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLL 453
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G+ E+GE + L++++P NS Y +LSNIYA RW + ++R + + G+KK
Sbjct: 454 AACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKK 513
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
PGCS IE++ +HEFVAGD SHP +Y CK+
Sbjct: 514 EPGCSLIEMNGIIHEFVAGDQSHPMSKEIY---CKL 546
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 36/253 (14%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ-LGAVELGEWIHN 99
+ W LI+G+ + + EA F M P + ++ LSAC + G V LG +H
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169
Query: 100 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---- 155
+ G+ + + NAL+DMYA+ + A ++F+ M+ +SV++WT++++GL G
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 156 ----LG-----------------------REALDMFSRMERARVKPNEITFIAILSACCH 188
G REAL+MF M+ + V +E T +++++AC
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G +E+G + + SR GI+ +ID+ + G ++ A + + M + W
Sbjct: 290 LGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWT 347
Query: 249 SLL--AASNIYGD 259
+++ A N YG+
Sbjct: 348 AIILGLAVNGYGE 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
+A+ + RM PD L A A+ + +H ++ ++G+ + +L+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR---EALDMFSRMERARVKP 174
YA G A + + + + W +I+G H R EA F M RA P
Sbjct: 86 TAYAAGGDGAAARALLSERERDTPVVWNALISG---HNRCRRFGEACCSFVDMARAGAAP 142
Query: 175 NEITFIAILSACCH-VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+T++++LSAC G V LG + + ++ S G+ P + ++D+ ++ A
Sbjct: 143 TPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS--GVLPDLRVENALVDMYAECADMESAW 200
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVE 261
KL M + + W SLL+ G V+
Sbjct: 201 KLFDGMQVRSVVS-WTSLLSGLTRLGRVD 228
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 230/341 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++A AK GD++ A F M KNV SWT++I+G+ Q +PNEAI LF +++ E V
Sbjct: 79 WNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAV 138
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+ +++ L+ACA LG ++LG +H Y + G V + N LIDMY K G + A +
Sbjct: 139 RPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARR 198
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ ++V++W+ MIAGLA+HG EAL +FS M + VKPN +TFI +L AC H+GL
Sbjct: 199 VFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGL 258
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GRR+F M + YG+ P+IE YGC++DL RAG L+EA + + MP + N +WG+LL
Sbjct: 259 IDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALL 318
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +++L E A++HL +L+P N G Y ++SNIYA RW ++ ++RK+M+D GVKK
Sbjct: 319 GGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKK 378
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S I V+ VHEFVAGD +HP + + +I K+ +MK
Sbjct: 379 TSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 33/239 (13%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M++ +V PD L AC +L V G+ IH ++ G + + L N ++++Y G+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHG-----------------------------L 156
+G A+ +FE M + +TW +IA LA G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 157 GR--EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
G+ EA+D+F ++E V+PNE+T +++L+AC +G ++LG R + ++ G + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHV 179
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ID+ + G L+ A ++ M E W +++A ++G E C +IKL
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKL 237
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 219/337 (64%), Gaps = 2/337 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LF ++ K+VISW LI GY ++ EA+ LF+ M
Sbjct: 231 KIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRS 290
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMY+K G I
Sbjct: 291 GESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIE 350
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M +KS+ W MI G A+HG A D+FSRM + +KP++ITF+ +LSAC
Sbjct: 351 AAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACS 410
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 411 HAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIW 470
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q+L K+EP+N G+Y +LSNIYA GRWNE +IR ++ D
Sbjct: 471 CSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDK 530
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 531 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 567
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 142/248 (57%), Gaps = 2/248 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ +V GYA G + +AR +F+ + K+V+SW +I+GY + EA+ LF+ M NV
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ +SA A+ G++ELG +H++I +G + + + NALID Y+K G++ A
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + K VI+W +I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K G+ +ID+ + G ++ A ++ M ++ A W ++
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPA-WNAM 370
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 371 IFGFAMHG 378
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N++ W T+ G+A P A+ L+ M + P+ L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------------------- 119
CA+L A + G IH ++ + G + ++ +LI M
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 120 ------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
YA G I A +F+ + K V++W MI+G G +EAL++F M + V+
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
P+E T + ++SA G +ELGR+ + + + +G ++ +ID + G ++ A
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWI-ADHGFGSNLKIVNALIDFYSKCGEMETA 249
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 233/360 (64%), Gaps = 12/360 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YAK G+L +F ++V+SW ++I + Q P EA+ LF+ M+ +NVK
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M+ LSACA+ E G W+H+YIE+ + + L+NA++DMY K G + A ++
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 133 FENMKNKSVITWTTMIAG------------LALHGLGREALDMFSRMERARVKPNEITFI 180
F+ M K +++WTTM+ G LA+HG G++A+ +FS+M+ +VKPN +TF
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFT 354
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
IL AC HVGLVE GR +FN M+ YG+ P ++ Y CM+D+LGRAG L+EA +L+ +MP
Sbjct: 355 NILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPM 414
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
A++WG+LL A I+ +V L E A LI+LEP N G Y +LSNIYA G+W+ +
Sbjct: 415 APAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGL 474
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
RK+MRD+G+KK PGCS IEV VHEF+ GD SHP ++Y L +I +++ ++ N+
Sbjct: 475 RKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNK 534
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 141/287 (49%), Gaps = 14/287 (4%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F+ SRL+ A + L+ A+ +F+ + N+ +W TLI YA P++++
Sbjct: 68 FSASRLI------TAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLL 121
Query: 62 LFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+F RM ++ PD+ + A ++L + G+ H + + L + V + N+LI Y
Sbjct: 122 IFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY 181
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
AK G++G +VF N + V++W +MI G EAL++F ME VKPN IT +
Sbjct: 182 AKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+LSAC E GR + ++ R I + M+D+ + G +++A++L +MP
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIE-RNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMP- 299
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 287
E + W ++L G ++GE + + H A+ S +
Sbjct: 300 EKDIVSWTTMLV-----GYAKIGEYDAAQGLAMHGHGKDAIALFSKM 341
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 233/347 (67%), Gaps = 1/347 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA++G++ +A LF M K++ISWTT+I Y+Q Q +A+ ++ M++ +
Sbjct: 335 WNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGI 394
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M SACA +GA+ELG+ IH+Y+ GLN V + +AL+DMYAK G + +L
Sbjct: 395 IPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLL 454
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + +K++ W +I GLA+HG +AL MF+ MER ++ PN +TFI+ILSAC H GL
Sbjct: 455 IFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGL 514
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F M Y I P I YGCM+D+L ++GYL EA +L++ M FE N+ IWG+LL
Sbjct: 515 VDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALL 574
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-K 310
++G+ E+ E A++ L+ LEP NSG+Y +L ++YA W E IR +M++ GV K
Sbjct: 575 NGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEK 634
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
K PG S+IE+ +H+F A SHPD D++Y +L +++GQ+K A ++
Sbjct: 635 KYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGYI 681
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 32 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGA 90
F M NV + +I G+ P A+ + M E NV P + + AC + A
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
VELG+ +H +I + G + + + AL+D Y+K + +A +VF+ M + WT M++
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 151 LALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
LA G A +F M ER N T+ ++ +G VE FN M ++
Sbjct: 311 LARVGDMDSARKLFEEMPER-----NTATWNTMIDGYARLGNVESAELLFNQMPTK---- 361
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECA 266
I + MI + Q+A + M + ++ +A G +ELG+
Sbjct: 362 -DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGK-E 419
Query: 267 LQHLIKLEPHNSGNY--AILSNIYAILGRWNES 297
+ H + + N Y + L ++YA G + S
Sbjct: 420 IHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLS 452
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 218/337 (64%), Gaps = 2/337 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y+K G+L A LFE + K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 302 KIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
+P+++ ML+ L ACA LGA+++G WIH YI++ L +LIDMYAK G I
Sbjct: 362 GERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIE 421
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF ++ +KS+ +W MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACS 481
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 482 RSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIW 541
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A I G+VELGE Q+LIK+EP N G Y +LSNIYA GRWNE KIR ++ D
Sbjct: 542 CSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDK 601
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 602 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 145/248 (58%), Gaps = 2/248 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ LF+ + K+V+SW +I+GYA+ EA+ LF+ M N+
Sbjct: 203 YTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNI 262
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ +SACAQ G++ELG +H++I+ +G + + + N+L+D+Y+K G++ A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACG 322
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ +PN++T ++IL AC H+G
Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382
Query: 192 VELGRRYFNIMKSRYGIEPKIEQY-GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + R +ID+ + G ++ A ++ + + + W ++
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAM 441
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 442 IFGFAMHG 449
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 124/260 (47%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N++ W T+ G+A P A+ L+ M + P+ L +
Sbjct: 84 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 143
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN------ 138
CA+ A + G+ IH ++ + G + + ++ +LI +Y ++G++ A +VF+ +
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSY 203
Query: 139 -------------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
K V++W MI+G A G +EAL++F M + ++
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIR 263
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T + ++SAC G +ELGR+ + + +G ++ ++DL + G L+ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNSLMDLYSKCGELETACG 322
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + ++ + W +L+
Sbjct: 323 LFEGLLYK-DVISWNTLIGG 341
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 233/344 (67%), Gaps = 1/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W+TM++GYA+VG+L AR LFE M +NV+SW +IAGYAQ ++ +AI LFR+MQ E
Sbjct: 227 WSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGG 286
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+++ +++ LSACA LGA++LG+WIH +I + + + L NAL DMYAK G + +A
Sbjct: 287 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 346
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M + VI+W+ +I GLA++G EA + F+ M ++PN+I+F+ +L+AC H G
Sbjct: 347 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 406
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G YF++M YGI PKIE YGC++DLL RAG L +AE L+ MP + N +WG+L
Sbjct: 407 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 466
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L IY D E GE + +++L+ ++SG+ L+N+YA +GR +++ R MRD
Sbjct: 467 LGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSM 526
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K PGCS+IE++ V+EF GD+SHP R+Y ++ ++ +MK A
Sbjct: 527 KTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVA 570
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 26/254 (10%)
Query: 23 GDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--ENVKPDEIAML 79
G+L ++ +F ++ N+ ++ L+ ++Q + + I+ F V PDE
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L ACA L V G+ +H ++ +YG + + + N+L+D+Y K G A ++F+ M +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V++W T+I+G G+ +A +F M ++ N +++ ++S VG +E R+ F
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLF 247
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ-----EAEKLLRRMPFEA----NAAIWGSL 250
M R + + MI AGY Q +A +L R+M E N S+
Sbjct: 248 ENMPMR-----NVVSWNAMI-----AGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297
Query: 251 LAASNIYGDVELGE 264
L+A G ++LG+
Sbjct: 298 LSACAHLGALDLGK 311
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 233/351 (66%), Gaps = 3/351 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ YAKVG++ A LF+ + K++++WT ++ GYAQ +P EA+ +F RMQ V
Sbjct: 209 WTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGV 268
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
K DE+ ++ +SACAQLGA + W+ + EQ +G + V + +ALIDMYAK G + A
Sbjct: 269 KTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDA 328
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M+ ++V ++++MI G A+HGL A+++F M + +KPN +TFI +L+AC H
Sbjct: 329 YKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHA 388
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+VE G++ F +M+ +G+ P + Y CM+DLLGRAG L+EA L++ MP + +WG+
Sbjct: 389 GMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGA 448
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G+ ++ + A HL +LEP+ GNY +LSNIYA GRW++ K+RK+MR G+
Sbjct: 449 LLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGL 508
Query: 310 KKMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
KK PGCS++E K +HEF AGD SHP + Q L + ++K+ + N
Sbjct: 509 KKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPN 559
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 34/263 (12%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 88
R +F+ + N WT LI GYA E++ L+ M+ + + P A L AC+
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 89 GAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT- 146
V LG +H I G + + + N LIDMY K G +G +VF+ M ++ VI+WT+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 147 ------------------------------MIAGLALHGLGREALDMFSRMERARVKPNE 176
M+ G A + REAL++F RM+ A VK +E
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 177 ITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+T + ++SAC +G + ++ +S +G + +ID+ + G +++A K+
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332
Query: 236 RRMPFEANAAIWGSLLAASNIYG 258
RM E N + S++ ++G
Sbjct: 333 ERME-ERNVYSYSSMIVGFAMHG 354
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ ++ + WT +I G AL G E++ +++ M R + P TF A+L AC
Sbjct: 95 VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALD 154
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V LGR+ G + +ID+ + G L ++ M + + W SL+
Sbjct: 155 VNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLI 213
Query: 252 AASNIYGDVE 261
A G++E
Sbjct: 214 VAYAKVGNME 223
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/361 (44%), Positives = 236/361 (65%), Gaps = 8/361 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY ++G++ +A LF M K++ISWTT+I Y+Q Q +A+ ++ M++ +
Sbjct: 238 WNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGI 297
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M SACA +GA+ELG+ IH+Y+ GLN V + +AL+DMYAK G + +L
Sbjct: 298 IPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLL 357
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + +K++ W +I GLA+HG +AL MF+ MER ++ PN +TFI+ILSAC H GL
Sbjct: 358 IFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGL 417
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F M Y I P I YGCM+D+L ++GYL EA +L++ M FE N+ IWG+LL
Sbjct: 418 VDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALL 477
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-K 310
++G+ E+ E A++ L+ LEP NSG+Y +L ++YA W E IR +M++ GV K
Sbjct: 478 NGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEK 537
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVA 370
K PG S+IE+ +H+F A SHPD D++Y IL +++GQ+K A + +LE V
Sbjct: 538 KYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTELDGQLKLAGY-------ILEPSVC 590
Query: 371 S 371
S
Sbjct: 591 S 591
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 32 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGA 90
F M NV + +I G+ P A+ + M E NV P + + AC + A
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
VELG+ +H +I + G + + + AL+D Y+K + +A +VF+ M + WT M++
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 151 LALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
LA G A +F M ER N T+ ++ +G VE FN M ++
Sbjct: 214 LARVGDMDSARKLFEEMPER-----NTATWNTMIDGYTRLGNVESAELLFNQMPTK---- 264
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECA 266
I + MI + Q+A + M + ++ +A G +ELG+
Sbjct: 265 -DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGK-E 322
Query: 267 LQHLIKLEPHNSGNY--AILSNIYAILGRWNES 297
+ H + + N Y + L ++YA G + S
Sbjct: 323 IHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLS 355
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 238/356 (66%), Gaps = 2/356 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W TM+ GYA D AR + M +K++++W LI+ Y Q +PNEA+ +F +Q++ N
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+K ++I +++ LSACAQ+GA+ELG WIH+YI+++G+ + +ALI MY+K G + K+
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +++ + V W+ MI GLA+HG G EA+DMF +M+ A VKPN +TF + AC H G
Sbjct: 421 EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ F+ M+S YGI P+ + Y C++D+LGR+GYL++A K + MP + ++WG+L
Sbjct: 481 LVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 540
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ ++ L E A L++LEP N G + +LSNIYA LG+W ++RK MR G+K
Sbjct: 541 LGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLK 600
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K PGCS IE+ +HEF++GD +HP +++Y L ++ ++K + + E S VL+
Sbjct: 601 KEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVLQ 655
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 163/310 (52%), Gaps = 38/310 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y GDL++A +F + EK+V+SW ++I G+ Q P++A+ LF++M+ E+VK
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ M+ LSACA++ +E G + +YIE+ +N + L NA++DMY K G I A ++
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 133 FENMKNKSVITWTTMIAGLAL-------------------------------HGLGREAL 161
F+ M+ K +TWTTM+ G A+ +G EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 162 DMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F ++ + +K N+IT ++ LSAC VG +ELGR + +K ++GI +I
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIH 408
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN-SG 279
+ + G L+++ ++ + + + +W +++ ++G G A+ K++ N
Sbjct: 409 MYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKP 464
Query: 280 NYAILSNIYA 289
N +N++
Sbjct: 465 NGVTFTNVFC 474
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 16 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPD 74
+A + L AR +F+ + + N +W TLI YA P +I F M E+ P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + A A++ ++ LG+ +H + + + V + N+LI Y G + A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+K K V++W +MI G G +AL++F +ME VK + +T + +LSAC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 195 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR+ + I ++R + + M+D+ + G +++A++L M E + W ++L
Sbjct: 251 GRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Query: 254 SNIYGDVE 261
I D E
Sbjct: 308 YAISEDYE 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
R+ + + ++ Y+K GDL +R +F + +++V W+ +I G A NEA+ +F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNN---ALIDMYA 121
MQ NVKP+ + AC+ G V+ E + + +E YG IVP ++D+
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG---IVPEEKHYACIVDVLG 513
Query: 122 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
+SG + KA++ E M S W ++ +H
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 216/334 (64%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LF+ ++ K+VISW T+I GY ++ EA+ LF+ M
Sbjct: 271 KIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRS 330
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACAQLGA++ G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 331 GENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIE 390
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M ++++ MI G A+HG A D+FSRM + ++P++ITF+ +LSAC
Sbjct: 391 AAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 450
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGRR F M Y I PK+E YGCMIDLLG G +EAE+++ M E + IW
Sbjct: 451 HSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIW 510
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q LIK+EP N G+Y +LSNIYA GRWNE IR ++ D
Sbjct: 511 CSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDK 570
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 571 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ +F+ + K+V+SW +I+GYA EA+ LF+ M NV
Sbjct: 172 YTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNV 231
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M+ +SACAQ G+++LG +H++I+ +GL + + + NALID+Y+K G++ A
Sbjct: 232 KPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACG 291
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + NK VI+W TMI G L +EAL +F M R+ PN++T ++IL AC +G
Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351
Query: 192 VELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAI 246
++ GR + I K G+ +ID+ + G ++ A ++ M NA I
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411
Query: 247 WG 248
+G
Sbjct: 412 FG 413
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 32/240 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++FE + E N++ W T+ G+A P AI L+ M + P+ L +CA+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---------------------- 125
L + G+ IH ++ + G + ++ +LI MY K+G+
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 126 ---------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
I A ++F+ + K V++W +I+G A G +EALD+F M + VKP+E
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T + ++SAC G ++LGR+ + + +G+ ++ +IDL + G ++ A L +
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDD-HGLGSNLKIVNALIDLYSKCGEVETACGLFQ 294
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/337 (48%), Positives = 222/337 (65%), Gaps = 5/337 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LF+ + K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 258 KIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 317
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNT-IVPLNNALIDMYAKSGKI 126
P+++ ML+ L ACA LGA+++G WIH YI + G+ T + L +LIDMYAK G I
Sbjct: 318 GETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDI 377
Query: 127 GKALQVFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
A QVF++ M N+S+ TW MI+G A+HG A D+FSRM ++P++ITF+ +LSA
Sbjct: 378 DAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSA 437
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ MP E +
Sbjct: 438 CSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGV 497
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IW SLL A I+G++ELGE + LIK+EP NSG+Y +LSNIYA GRWNE KIR ++
Sbjct: 498 IWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLN 557
Query: 306 DMGV-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
D G+ KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 558 DKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
+ ++AGY G + +A+ LF+ + K+V+SW +I+GY + EA+ LF+ M + N
Sbjct: 158 YTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTN 217
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDE M+ +SACAQ ++ELG +H++I +G + + + NALID+Y+K G++ A
Sbjct: 218 VRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETAC 277
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ + NK VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 278 ELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 337
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQY-GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+++GR + I K G+ + +ID+ + G + A+++ + + W
Sbjct: 338 AIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397
Query: 249 SLLAASNIYG 258
++++ ++G
Sbjct: 398 AMISGFAMHG 407
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 34/258 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F+ + E N++ W T+ G+A P A+ L+ M + PD L +CA+
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV--------------- 132
+ G+ IH ++ + G + + ++ +LI MYA++G++ A +V
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 133 ----------------FENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPN 175
F+ + K V++W MI+G G +EAL++F M V+P+
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E T + ++SAC +ELGR + + +G ++ +IDL + G ++ A +L
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWIND-HGFASNLKIVNALIDLYSKFGEVETACELF 280
Query: 236 RRMPFEANAAIWGSLLAA 253
+ + + W +L+
Sbjct: 281 DGL-WNKDVISWNTLIGG 297
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 217/334 (64%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G+L A LFE + K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 259 KIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 318
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 319 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIE 378
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF ++ +KS+ +W MI G A+HG + D+FSRM + ++P++ITF+ +LSAC
Sbjct: 379 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACS 438
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 439 HSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIW 498
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE Q+LIK+EP N G+Y +LSNIYA GRWNE R ++ D
Sbjct: 499 CSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDK 558
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 559 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + NA+ +F+ + K+V+SW +I+GYA+ EA+ LF+ M NV
Sbjct: 160 YTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 219
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ +SACAQ G++ELG +H++I+ +G + + + NALID+Y+K G++ A
Sbjct: 220 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACG 279
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAI 246
+++GR + I K G+ +ID+ + G ++ A ++ + ++ NA I
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 399
Query: 247 WG 248
+G
Sbjct: 400 FG 401
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N++ W T+ G+A P A+ L+ M + P+ L +
Sbjct: 41 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 100
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN------ 138
CA+ A + G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 101 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSY 160
Query: 139 -------------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
K V++W MI+G A G +EAL++F M + V+
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 220
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T + ++SAC G +ELGR+ + + +G ++ +IDL + G L+ A
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNALIDLYSKCGELETACG 279
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L +P++ + W +L+
Sbjct: 280 LFEGLPYK-DVISWNTLIGG 298
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 242/360 (67%), Gaps = 3/360 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W++MV GYA+ G++N AR LF M E++VISWT +I+GY+Q Q +EA+ LF+ M+ +
Sbjct: 284 WSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGI 343
Query: 72 KPDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE+ ++A LSACA+LGA +LG+ + H YIE N L A++DMYAK G I AL
Sbjct: 344 KPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSAL 403
Query: 131 QVFENM-KN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
++F + KN K+ + +MIAGLA HGLG A+ +F + +KP+E+TF+ +L AC H
Sbjct: 404 EIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGH 463
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL+E G++ F M + YGI+P++E YGCM+DLLGR G L+EA L+++MPFEAN+ IW
Sbjct: 464 SGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWR 523
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A +G+V++GE A Q L+++E + Y +LSNI A +W E+ ++RKVM D G
Sbjct: 524 ALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHG 583
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG SYIE+ +H FVA D SHP + +L + ++K A ++ N + + D
Sbjct: 584 IRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDID 643
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+F++SRL+ F++ + L+++R LF + N+ W T+I GY++ D P EAI
Sbjct: 41 IFSISRLI-SFFSLL----GSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAI 95
Query: 61 TLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
L+ M + + P+ L++CA+L ++E G +H++I ++G + + + NALI +
Sbjct: 96 VLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHL 155
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y+ G + A +F+ + ++++ TMI G A AL +F M+ + + P+E TF
Sbjct: 156 YSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTF 215
Query: 180 IAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+A+ S C + +G++ + + K+ I+ I ++D+ + G + AE++ M
Sbjct: 216 VALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTM 275
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
+AA W S++ G++ + H + + ++ + + Y+ G+ +E+
Sbjct: 276 GTSKSAAAWSSMVCGYARCGEINVARKLFNH---MHERDVISWTAMISGYSQAGQCSEAL 332
Query: 299 KIRKVMRDMGVK 310
++ K M +G+K
Sbjct: 333 ELFKEMEALGIK 344
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 228/345 (66%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ AK GD++ AR +F+ M E++ ++W +IAGYAQ + EA+ +F MQ+E VK +
Sbjct: 184 MLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLN 243
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E++M+ LSAC L ++ G W+H Y+E+Y + V L AL+DMYAK G + +A+QVF
Sbjct: 244 EVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFW 303
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
MK ++V TW++ I GLA++G G E+LD+F+ M+R V+PN ITFI++L C VGLVE
Sbjct: 304 GMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEE 363
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR++F+ M++ YGI P++E YG M+D+ GRAG L+EA + MP + W +LL A
Sbjct: 364 GRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHAC 423
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
+Y + ELGE A + +++LE N G Y +LSNIYA W +R+ M+ GVKK+PG
Sbjct: 424 RMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPG 483
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
CS IEV VHEF+ GD SHP +D + L +I+ ++ + ++ N
Sbjct: 484 CSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVAN 528
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 13 NTMVAGYA-KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM---QV 68
NT YA K+ + NN LF L ++I Y++ P+++ + +
Sbjct: 55 NTTNLDYANKLLNHNNNPTLFTL---------NSMIRAYSKSSTPSKSFHFYANILHSNN 105
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA------- 121
N+ PD + CAQL A G +H + ++G + L+ MYA
Sbjct: 106 NNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSS 165
Query: 122 ------------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
K G I A ++F+ M + +TW MIAG A G
Sbjct: 166 CHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRS 225
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
REALD+F M+ VK NE++ + +LSAC H+ +++ G R+ + RY + +
Sbjct: 226 REALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHG-RWVHAYVERYKVRMTVTLGTA 284
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
++D+ + G + A ++ M E N W S + A N +G+ L
Sbjct: 285 LVDMYAKCGNVDRAMQVFWGMK-ERNVYTWSSAIGGLAMNGFGEESL 330
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
R+ +V YAK G+++ A +F M E+NV +W++ I G A E++ LF
Sbjct: 276 RMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFND 335
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSG 124
M+ E V+P+ I ++ L C+ +G VE G + + YG+ + ++DMY ++G
Sbjct: 336 MKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAG 395
Query: 125 KIGKALQVFENMKNKS-VITWTTMI 148
++ +AL +M + V W+ ++
Sbjct: 396 RLKEALNFINSMPMRPHVGAWSALL 420
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 229/333 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++G+ ++G + +AR +F+ M + ++SWTT+I GYA+ +A+ +FR MQV +
Sbjct: 175 WNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGI 234
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDEI++++ L ACAQLGA+E+G+WIH Y E+ G + NAL++MYAK G I +A
Sbjct: 235 EPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWG 294
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K VI+W+TMI GLA HG G A+ +F M++A V PN +TF+ +LSAC H GL
Sbjct: 295 LFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGL 354
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G RYF++M+ Y +EP+IE YGC++DLLGR+G +++A + +MP + ++ W SLL
Sbjct: 355 WNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLL 414
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ I+ ++E+ A++ L+KLEP SGNY +L+NIYA L +W +RK++R +KK
Sbjct: 415 SSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKK 474
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV+ V EFV+GD S P ++ IL
Sbjct: 475 TPGCSLIEVNNLVQEFVSGDDSKPFSQEVFWIL 507
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 37/315 (11%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALS 83
++ A +F+ + NV S+ +I Y + AIT+F +M ++ PD+ +
Sbjct: 55 VDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIK 114
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN----- 138
+CA L LG+ +H ++ ++G T NALIDMY K G + A QV+E M
Sbjct: 115 SCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVS 174
Query: 139 --------------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+++++WTTMI G A G +AL +F M+ +
Sbjct: 175 WNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGI 234
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+EI+ I++L AC +G +E+G ++ + + G + ++++ + G + EA
Sbjct: 235 EPDEISVISVLPACAQLGALEVG-KWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAW 293
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAI 290
L +M E + W +++ +G + + K + P+ +LS A
Sbjct: 294 GLFNQM-IEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSAC-AH 351
Query: 291 LGRWNESGKIRKVMR 305
G WNE + VMR
Sbjct: 352 AGLWNEGLRYFDVMR 366
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 235/345 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GYA G L+ A LF+ M ++N++SW+ LI GY Q+ ++A+ LF+ MQV V
Sbjct: 236 WTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKV 295
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K DE+ + LSACA+LGA++ G W+H YI+++G+ L+ ALIDMY+K G+I A +
Sbjct: 296 KMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWK 355
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ +K V W++MI GLA+H G +A+++F++M ++P+EIT+I IL+AC H GL
Sbjct: 356 VFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGL 415
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V++G + FN M +P+++ YGC++DLLGRAG L +A +++ MP +A+ AIW +LL
Sbjct: 416 VDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALL 475
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ +VELGE + LIK+EP N NY + SN+YA + RW+ SGK+R+ M+ G++K
Sbjct: 476 SACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQK 535
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
PGCS IE++ VHEFV+ D SHP +Y++L + M +H
Sbjct: 536 NPGCSSIELNGAVHEFVSRDHSHPQSQVIYELLHILTNHMVQEDH 580
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 76/338 (22%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAI 60
+ RLL F A + +G LN A+ LF+ + +N +TT+I YA P EA
Sbjct: 64 YAFGRLLLSF-----ASFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAF 118
Query: 61 TLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
+ RM + V P++ SAC++ V G+ H + ++ V N+L+D
Sbjct: 119 AFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLD 178
Query: 119 MYAKSGKIG--------------------------------KALQVFENMKNKSVITWTT 146
Y K G++G +A ++F+ M + V++WT
Sbjct: 179 FYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTI 238
Query: 147 MIAGLALHGLGRE-------------------------------ALDMFSRMERARVKPN 175
M+ G A G E AL++F M+ A+VK +
Sbjct: 239 MLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMD 298
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E+ +LSAC +G ++ G R+ ++ ++GI+ +ID+ + G + A K+
Sbjct: 299 EVIVTTLLSACARLGALDQG-RWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVF 357
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ + +W S++ ++ GE A++ K+
Sbjct: 358 QETG-DKKVFVWSSMIGGLAMHS---FGEKAIELFAKM 391
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 225/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
W TM+ G+AK+G+ + A +F+ M K +W LI+ Y Q +P A++LF MQ+ ++
Sbjct: 343 WTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKD 402
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE+ ++ AL A AQLGA++ G WIH YI+++ +N L +L+DMYAK G + KA+
Sbjct: 403 AKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAM 462
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF ++ K V W+ MI LA++G G+ ALD+FS M A +KPN +TF IL AC H G
Sbjct: 463 EVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAG 522
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV G + F M+ YGI P+I+ Y C++D+ GRAG L++A + +MP AA+WG+L
Sbjct: 523 LVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGAL 582
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + +G+VEL E A Q+L++LEP N G + +LSNIYA G W + +RK+MRD VK
Sbjct: 583 LGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVK 642
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K P CS I+V+ VHEF+ GD SHP ++Y L +I+ + K
Sbjct: 643 KEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFK 684
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 38/308 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y G + A +F M K+V+SW +I +A P++A+ LF+ M++++VK
Sbjct: 212 NSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVK 271
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M++ LSACA+ +E G WI +YIE G + LNNA++DMY K G I A +
Sbjct: 272 PNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDL 331
Query: 133 FENMKNKSVITWTTMIAGLA-------------------------------LHGLGREAL 161
F M K +++WTTM+ G A +G R AL
Sbjct: 332 FNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVAL 391
Query: 162 DMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F M+ ++ KP+E+T I L A +G ++ G + ++ ++ I ++D
Sbjct: 392 SLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDINLNCHLATSLLD 450
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK-LEPHNSG 279
+ + G L +A ++ + + +W +++ A +YG G+ AL LE +
Sbjct: 451 MYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIGALAMYGQ---GKAALDLFSSMLEAYIKP 506
Query: 280 NYAILSNI 287
N +NI
Sbjct: 507 NAVTFTNI 514
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 3/239 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACA 86
A+ +F + + N+ W TLI GYA P ++ +F M + P++ A +
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
+L + LG +H + + L++ + + N+LI+ Y SG A +VF NM K V++W
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
MI AL GL +AL +F ME VKPN IT +++LSAC +E GR + +++
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN- 303
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
G + M+D+ + G + +A+ L +M E + W ++L G+ + C
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMS-EKDIVSWTTMLDGHAKLGNYDEAHC 361
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 227/346 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G ++ A+ LF+ M +++ +SW +IAGY+Q EA+ LF +M+ E
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + +ALS CA + A+ELG+ +H + + G T + NAL+ MY K G I +A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K +++W TMIAG + HG G AL F M+R +KP++ T +A+LSAC H GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF M YG+ P + Y CM+DLLGRAG L++A L++ MPFE +AAIWG+LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++G+ EL E A + +EP NSG Y +LSN+YA GRW + GK+R MRD GVKK
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
+PG S+IE+ + H F GD HP+ D ++ L +++ +MK A ++
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 43/289 (14%)
Query: 2 FTLSRLLYK--------FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F L+R L+ WN M+ GY + +L AR LFE+M E++V SW T+++GYAQ
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 54 DQPNEAITLFRRMQ--------------VENVKPDEIAML-------AALSACAQLGAVE 92
++A ++F RM V+N K +E ML A +S LG
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 93 LGEWI---HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 149
+ I + + + +V N +I YA+SGKI +A Q+F+ + V TWT M++
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G + + EA ++F +M + NE+++ A+L+ +E+ + F++M R
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR---- 341
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + MI + G + EA+ L +MP + + W +++A + G
Sbjct: 342 -NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 388
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+ ++ W I+ Y + + NEA+ +F+RM + ++ +S + G EL
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARK 116
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+ + + + L + N +I Y ++ +GKA ++FE M + V +W TM++G A +G
Sbjct: 117 LFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 157 GREALDMFSRMERARVKPNEITFIAILSA 185
+A +F RM + N++++ A+LSA
Sbjct: 173 VDDARSVFDRMP----EKNDVSWNALLSA 197
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 221/336 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++++G A++G ++ AR LF+ M E++ +SWT +I GY + EA+ +FR MQ NV
Sbjct: 192 WTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV 251
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE M++ ++ACAQLGA+E+GEW+ Y+ + G+ + NALIDMY+K G I +AL
Sbjct: 252 SADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALD 311
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++ TWT +I GLA++G EA++MF RM R P+E+TFI +L+AC H GL
Sbjct: 312 VFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGL 371
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR +F M Y I P + YGC+IDLLGRAG + EA + +MP N+ IWG+LL
Sbjct: 372 VDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLL 431
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G+ E+GE + L++L+P NS Y +LSNIYA RW + ++R + + G+KK
Sbjct: 432 AACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKK 491
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
PGCS IE+ +HEFVAGD SHP +Y L I
Sbjct: 492 EPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESI 527
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 33/230 (14%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ-LGAVELGEWIHN 99
++W LI+G+ + + E+ F M P + ++ LSAC + V LG +H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 100 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---- 155
+ G+ + + NAL+DMYA+ +G A +VF+ M+ +SV++WT++++GLA G
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 156 ---------------------------LGREALDMFSRMERARVKPNEITFIAILSACCH 188
REAL+MF M+ + V +E T +++++AC
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+G +E+G + + SR GI+ +ID+ + G ++ A + + M
Sbjct: 268 LGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQL----GAVELGEWIHNYIEQYGLNTIVPLN 113
+A+ + RM +PD A L A A+ G+ +H ++ + G+ +
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
++L+ Y G A + + W +I+G G E+ F M RA
Sbjct: 62 SSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAA 119
Query: 174 PNEITFIAILSACCH------VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
P +T++++LSAC +G+ GR ++ S G+ P + ++D+
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGR----VVGS--GVLPDLRVENALVDMYAECAD 173
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ A K+ M + + W SLL+ G V+
Sbjct: 174 MGSAWKVFDGMQVRSVVS-WTSLLSGLARLGQVD 206
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 232/343 (67%), Gaps = 1/343 (0%)
Query: 13 NTMVAGYAKV-GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
NTMV Y G + AR LF+ M + + ++WT +I GYA++ Q A+ LFR+MQ+ V
Sbjct: 148 NTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGV 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD++ M++ LSAC LGA+ELG+WI +YIE+ + V L+NAL+DM+AK G + KAL
Sbjct: 208 CPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALG 267
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F NM +++++WT++I GLA+HG G EA+ +F M+ + + P +I FI +LSAC H GL
Sbjct: 268 LFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGL 327
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF+ M ++GI PKIE YGCM+DLL RAG + EA + + RMP E N IW +L+
Sbjct: 328 VERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLI 387
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++G+++LGE + LI+ EP + NY +LSNIY + W + KIR M G++K
Sbjct: 388 SACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQK 447
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG + IE+ +HEF+ GD SH ++ + +++ ++ +MK A
Sbjct: 448 VPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRA 490
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 43 WTTLIAGYAQMDQP-NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
++T+I YA+ Q + AI + M + P++ A L ACA L + LG+ +H +
Sbjct: 76 FSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSL 135
Query: 102 EQYGLNTIVPLNNALIDMY-AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
++G + + + N ++ MY SG + A ++F+ M +TWT MI G A G A
Sbjct: 136 VKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGA 195
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F +M+ A V P+++T +++LSAC +G +ELG ++ + + +E ++D
Sbjct: 196 VGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELG-KWIESYIEKERVLKTVELSNALVD 254
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G + +A L R M + W S++ ++G
Sbjct: 255 MFAKCGDVDKALGLFRNMS-KRTIVSWTSVIVGLAMHG 291
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 223/341 (65%), Gaps = 1/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++ +A++G + ARA+F M +K V+SWT L++GY + A+ FR MQ+E
Sbjct: 187 WNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGF 246
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLGA+ELG WI+ Y ++ + + NAL++MYAK G I +ALQ
Sbjct: 247 EPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQ 306
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F M K VI+W+TM+ GLA HG +EA+ +F+ MER VKPN ITF+ +LSAC H G
Sbjct: 307 LFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAG 366
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G YF+ M YGIEP +E YGC++DLL R+G +Q L+ MP A+A IWGS+
Sbjct: 367 LLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSV 426
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +GDV+ A + L+ LEP + GN +L+N+YA RW+E RK +R ++
Sbjct: 427 LNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMR 486
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
K PGCS IEV V EFVAG+ P+F L +L + Q+
Sbjct: 487 KTPGCSLIEVDNVVQEFVAGEDLKPEFGGLSGVLDILASQL 527
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 44/276 (15%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------DE 75
G + +A +F + E N+ +I YAQ + +AIT++ RM P D
Sbjct: 59 GRVAHATRVFSQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDR 118
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY--------------- 120
L AC L A++LG+ +H ++ + G + + N+LI+MY
Sbjct: 119 FTYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDG 178
Query: 121 ----------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
A+ G++ KA VF +M +K+V++WT +++G G A++ F
Sbjct: 179 MQERDVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAF 238
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC--MIDLL 222
M+ +P++++ +A+L AC +G +ELGR + + E Y C ++++
Sbjct: 239 RLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLR---ETYVCNALVEMY 295
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + +A +L M E + W +++ +G
Sbjct: 296 AKCGCIDQALQLFNGMA-EKDVISWSTMVGGLAAHG 330
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E A++A+L ACA + +H + + L+ L ++ + G++ A +VF
Sbjct: 13 EDAVMASLRACASFRDLLR---VHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFS 69
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 187
++ ++ MI A + +A+ ++ RM R R P + T+ +L AC
Sbjct: 70 QVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACG 129
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ ++LG++ + R G E +I++ RAG L A K+ M E + W
Sbjct: 130 GLMALDLGKQVHGHV-VRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQ-ERDVVSW 187
Query: 248 GSLLAA 253
++++A
Sbjct: 188 NTVISA 193
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 222/332 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY K G++ A +F+ M EKNVISWT++I G+ + EA+ L ++M V +
Sbjct: 180 WNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGI 239
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+I + +LSACA LGA+E G+WIH YI + + L ALIDMY K G++ KAL
Sbjct: 240 KPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALL 299
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K V TWT +I G A+HG G EALD F++M++A +KP TF A+L+AC H GL
Sbjct: 300 VFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGL 359
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G+ F M + Y ++P +E YGCM+DLLGRAG+L+EA++ + MP + NAAIWGSLL
Sbjct: 360 VEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLL 419
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +++ +ELG+ + LI+L+P + G Y L++I+A G W+E+ ++R +++ G+
Sbjct: 420 NACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLN 479
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 343
+PGCS I ++ HEF AG HP +Y +
Sbjct: 480 LPGCSTITLNGVAHEFFAGAEPHPHVREMYDM 511
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 46/284 (16%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
T+SRLL + + +L AR +F+ ++ N + W T+I Y+ + P EA+
Sbjct: 44 LTVSRLLTTY------ASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALL 97
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L+ +M ++ + L AC+ L A+ IH I + G + V N+L+ +YA
Sbjct: 98 LYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYA 157
Query: 122 KSGKIGKALQVFENMKNKSVITWTT-------------------------------MIAG 150
SG I A +F+ + ++ +++W T MI G
Sbjct: 158 ISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVG 217
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIE 209
G+ +EAL + +M A +KP++IT LSAC +G +E G+ + I K++ I+
Sbjct: 218 FVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKID 277
Query: 210 PKIEQYGC-MIDLLGRAGYLQEA----EKLLRRMPFEANAAIWG 248
P + GC +ID+ + G +++A KL ++ + A I G
Sbjct: 278 PVL---GCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGG 318
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A VF+ + + + + W TMI + EAL ++ +M + N TF +L AC
Sbjct: 64 ARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSA 123
Query: 189 V-GLVELGRRYFNIMKSRYGIE---------------------------PK--IEQYGCM 218
+ L E + + I+K +G E P I + M
Sbjct: 124 LSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTM 183
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 271
ID + G ++ A K+ + MP E N W S++ G + C LQ ++
Sbjct: 184 IDGYIKCGNVEMAYKIFQAMP-EKNVISWTSMIVGFVRTGMHKEALCLLQQML 235
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 236/356 (66%), Gaps = 2/356 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W TM+ GYA D AR + M +K++++W LI+ Y Q +PNEA+ +F +Q++ N
Sbjct: 303 WTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKN 362
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+K ++I +++ LSACAQ+GA+ELG WIH+YI++ G+ + +ALI MY+K G + KA
Sbjct: 363 IKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAR 422
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +++ + V W+ MI GLA+HG G EA+DMF +M+ A VKPN +TF + AC H G
Sbjct: 423 EVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 482
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ F M+S YGI P+ + Y C++D+LGR+GYL++A K + MP + ++WG+L
Sbjct: 483 LVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 542
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ ++ L E A L++LEP N G + +LSNIYA G+W+ ++RK MR G+K
Sbjct: 543 LGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLK 602
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K PGCS IE+ +HEF++GD +HP +++Y L ++ ++K + + E S VL+
Sbjct: 603 KEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK-SNGYEPEMSHVLQ 657
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 163/310 (52%), Gaps = 38/310 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y GDL++A +F + EK+V+SW ++I G+ Q P++A+ LF++M+ E+VK
Sbjct: 172 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 231
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ M+ LSACA++ +E G + +YIE+ +N + L NA++DMY K G I A ++
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 291
Query: 133 FENMKNKSVITWTTMIAGLAL-------------------------------HGLGREAL 161
F+ M+ K +TWTTM+ G A+ +G EAL
Sbjct: 292 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEAL 351
Query: 162 DMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F ++ + +K N+IT ++ LSAC VG +ELGR + +K + GI+ +I
Sbjct: 352 LVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIK-KNGIKMNFYVTSALIH 410
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN-SG 279
+ + G L++A ++ + + + +W +++ ++G G A+ K++ N
Sbjct: 411 MYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG---CGSEAVDMFYKMQEANVKP 466
Query: 280 NYAILSNIYA 289
N +N++
Sbjct: 467 NGVTFTNVFC 476
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 16 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK--P 73
+A + L AR +F+ + + N +W TLI YA P +I F M + P
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ + A A++ ++ LG+ +H + + + V + N+LI Y G + A +VF
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+K K V++W +MI G G +AL++F +ME VK + +T + +LSAC + +E
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 194 LGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRR + I ++R + + M+D+ + G +++A++L M E + W ++L
Sbjct: 252 FGRRVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLD 308
Query: 253 ASNIYGDVELGECALQHLIK 272
I D E L + K
Sbjct: 309 GYAISEDYEAAREVLNAMPK 328
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 229/344 (66%), Gaps = 1/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K+G+ +A LF M +++ISWTT++ Y++ + E I LF + + +
Sbjct: 176 WNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGM 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M +SACA LGA+ LG+ +H Y+ G + V + ++LIDMYAK G I AL
Sbjct: 236 IPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALL 295
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K++ W +I GLA HG EAL MF MER R++PN +TFI+IL+AC H G
Sbjct: 296 VFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGF 355
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E GRR+F M Y I P++E YGCM+DLL +AG L++A +++R M E N+ IWG+LL
Sbjct: 356 IEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALL 415
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-K 310
++ ++E+ A+Q+L+ LEP NSG+Y++L N+YA RWNE KIR M+D+GV K
Sbjct: 416 NGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEK 475
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+ PG S++E++K VH F A DT HP + +L+ +L +++ Q++ A
Sbjct: 476 RCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAELDDQLRLA 519
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ + + +N A + F + NV+ + LI G +A+ + M NV
Sbjct: 14 NQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVM 73
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + + AC L GE +H ++ ++G ++ V + LI+ Y+ G +G + +V
Sbjct: 74 PTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRV 133
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M + V WTTMI+ G A +F M V T+ A++ +G
Sbjct: 134 FDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVA----TWNAMIDGYGKLGNA 189
Query: 193 ELGRRYFNIMKSR 205
E FN M +R
Sbjct: 190 ESAEFLFNQMPAR 202
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/334 (46%), Positives = 222/334 (66%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+ YAK GDL NA LF+ + +N +SW+ ++A Y+Q + P EA+ +F M V
Sbjct: 302 WTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGV 361
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P + +++ LSACAQLG +++G +++ YI + + V L+NA IDM+AK G +G A
Sbjct: 362 EPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAAS 421
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F NM++K+V++W TMI ALHG EAL +F + + + P+EIT+I +LSAC H G
Sbjct: 422 RLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSG 481
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR +F MK YGIEP+ E Y CMIDLLG+ G L+EA ++ R MP A+ A WG+L
Sbjct: 482 LVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGAL 541
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++G+VE+G+CA L+ L+P +SG Y ++S IYA +W + IR VMRD GVK
Sbjct: 542 LNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVK 601
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PGCS IEV + HEF+A D SH + +Y L
Sbjct: 602 KNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAAL 635
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 33/281 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YA L +AR LF+ M +++V+SWTTL+ GYA+ P+EA +F RM V
Sbjct: 170 NALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGG 229
Query: 73 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ ++AA SA Q+G + LG +H + + G+ V L NAL+DM+ K G + A +
Sbjct: 230 WPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKE 289
Query: 132 VFENMKNKSVITWTTMIAGLALHG-------------------------------LGREA 160
+F+ M K V +WT+M++ A G L EA
Sbjct: 290 IFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEA 349
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F+ M A V+P + T +++LSAC +G +++GR ++ + +E + ID
Sbjct: 350 MRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFID 409
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G + A +L R M + N W +++ A ++G E
Sbjct: 410 MFAKCGDVGAASRLFRNME-DKNVVSWNTMIVAHALHGQSE 449
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 9 YKFWNTMVAGYAKVGD---LNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFR 64
++F + + + + D L +A A+ E N T++ G+ + +P A+ LFR
Sbjct: 62 HRFPASRLLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFR 121
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKS 123
R+ + + D ++ A+ A + E IH + G + V + NAL+ MYA S
Sbjct: 122 RVLRDRLPADARTIVFAVKAATT--SSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASS 179
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-PNEITFIAI 182
+ A ++F+ M ++ V++WTT++ G A GL EA +F RM A PNE+T +A
Sbjct: 180 MSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAA 239
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
SA +GL+ LGR + G+ + ++D+ G+ G + A+++ MP +
Sbjct: 240 ASAAGQIGLLGLGRMVHQCVVES-GVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIK- 297
Query: 243 NAAIWGSLLAASNIYGDVE 261
+ W S+++A GD+E
Sbjct: 298 DVYSWTSMVSAYAKCGDLE 316
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 237/388 (61%), Gaps = 32/388 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM------ 66
NT++ Y+ G L +AR +F+ M K+V+SW T+I YAQ D P+EAI LFRRM
Sbjct: 114 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNL 173
Query: 67 --------------------------QVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
Q+ VK D++ M + L AC LGA+ELG+W+H Y
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 233
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
IE+ + V L AL+DMYAK G I A++VF+ M K V+TWT +I GLA+ G G +A
Sbjct: 234 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 293
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L++F M+ + VKP+ ITF+ +L+AC H GLV G YFN M ++YGI+P IE YGCM+D
Sbjct: 294 LELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVD 353
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 280
+LGRAG + EAE L++ MP + + LL+A I+G++ + E A Q LI+L+P N G
Sbjct: 354 MLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGT 413
Query: 281 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
Y +LSNIY+ + W + K+R++M + +KK PGCS IEV VHEFV GD SHP +
Sbjct: 414 YVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEI 473
Query: 341 YQILCKINGQMKFAEHLQNEFSGVLESD 368
Y+ L + ++K A ++ ++ + + D
Sbjct: 474 YETLDDMMRRLKSAGYVPDKSEVLFDMD 501
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F + + ++I GY + P +AI ++ M ++ + PD +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+C G + G+ +H + + G + + N L++MY+ G + A +VF+ M NKSV+
Sbjct: 86 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERAR------------------------------- 171
+W TMI A L EA+ +F RME A
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 172 -VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
VK +++T ++L AC H+G +ELG ++ ++ + IE + ++D+ + G ++
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYG 258
A ++ + MP E + W +L+ + G
Sbjct: 262 AMRVFQEMP-EKDVMTWTALIVGLAMCG 288
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 223/339 (65%), Gaps = 1/339 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G L+ AR LF+ + EKN + W +LI GY Q+ NE I L R M + N+KPD +
Sbjct: 253 YVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTV 312
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
LSACAQ+GA LG W+H + E+ G+ + + ALIDMYAK G IG A +VF+ M
Sbjct: 313 SGVLSACAQMGAFNLGNWVHRFAEKKGIWDVF-IGTALIDMYAKCGFIGAARKVFDQMNE 371
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++V TW +++G A HG A+++FS M + +P+ ITF+A+L AC H GLVE G++Y
Sbjct: 372 RNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQY 431
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F++M Y I P++E YGCM+DLLGRAG LQEA +L++ M E N +WG+LL+A +I+G
Sbjct: 432 FDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHG 491
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
++E+GE A H+IKL + G+Y IL+N+YA R+N +R++M + G+ K GCS I
Sbjct: 492 NIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMI 551
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
E+ VHEFV D HP + +Y +L +++ ++K A ++
Sbjct: 552 EIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGYV 590
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIA 77
Y G++ NA+ +F+ K+V+ W LI GYA+ ++ +F+ M +V+ V+P+E
Sbjct: 150 YMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGT 209
Query: 78 MLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
M+ + AC + ++LG IH Y+ + L V L ALI++Y K G + A ++F+ +
Sbjct: 210 MMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEI 269
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K+ + W ++I G G E +++ M + +KP+ T +LSAC +G LG
Sbjct: 270 PEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLG- 328
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
+ + + GI + +ID+ + G++ A K+ +M E N A W ++L+
Sbjct: 329 NWVHRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQMN-ERNVATWNAILSGYAS 386
Query: 257 YGDVE 261
+G E
Sbjct: 387 HGQAE 391
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALS 83
L+ A +F E + + +I Y+ P AI+++ +M+ +N+ D+
Sbjct: 54 LDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFK 113
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
ACA AVE G+ +H I + G L ++L++ Y G+IG A QVF+ K V+
Sbjct: 114 ACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVF 173
Query: 144 WTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W +I G A G+ ++ +F M E V+PNE T + ++ AC ++LGR M
Sbjct: 174 WNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYM 233
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV-E 261
+ ++ +I+L + GYL A KL +P E N +W SL+ G + E
Sbjct: 234 MKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIP-EKNTVVWNSLICGYCQIGSLNE 292
Query: 262 LGECALQ-HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
+ E + HL L+P +LS A +G +N + + G+
Sbjct: 293 VIELLREMHLSNLKPDRFTVSGVLSAC-AQMGAFNLGNWVHRFAEKKGI 340
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 225/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY + G + +A LF M EK+V+SW+ +I+GYAQ + +EA+ LF+ MQ+ V
Sbjct: 340 WNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGV 399
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE A+++A+SAC L ++LG+WIH YI + L V L+ LIDMY K G + AL+
Sbjct: 400 RPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALE 459
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ K V TW +I GLA++G ++L+MF+ M++ PNEITF+ +L AC H+GL
Sbjct: 460 VFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGL 519
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GR YFN M + IE I+ YGCM+DLLGRAG L+EAE+L+ MP + A WG+LL
Sbjct: 520 VNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALL 579
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + D E+GE + LI+L+P + G + +LSNIYA G W +IR +M GV K
Sbjct: 580 GACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVK 639
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS IE + VHEF+AGD +HP + + +L + ++K
Sbjct: 640 TPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLK 680
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 67/315 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVI------------------------------ 41
WNT++AGY + G++ A +FE M E+N I
Sbjct: 174 WNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRER 233
Query: 42 ---SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
SW+ +++ Y Q + EA+ LF M+ V DE+ +++ALSAC+++ VE+G W+H
Sbjct: 234 DMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVH 293
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN----------------------- 135
+ G+ V L NALI +Y+ G+I A ++F++
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSI 353
Query: 136 ---------MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
M K V++W+ MI+G A H EAL +F M+ V+P+E ++ +SAC
Sbjct: 354 QDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISAC 413
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H+ ++LG ++ + SR ++ + +ID+ + G ++ A ++ M E +
Sbjct: 414 THLATLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVST 471
Query: 247 WGSLLAASNIYGDVE 261
W +++ + G VE
Sbjct: 472 WNAVILGLAMNGSVE 486
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 31 LFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 89
+F + N +W T++ + + + P++A+ ++ + KPD L CA
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 149
+ G +H + G + V + N L+++YA G +G A +VFE +++W T++A
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179
Query: 150 GLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
G G EA +F M ER + N + IA+ G VE RR FN ++ R
Sbjct: 180 GYVQAGEVEEAERVFEGMPERNTIASN--SMIALFG---RKGCVEKARRIFNGVRGR 231
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 42/254 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G + +AR +FE +++SW TL+AGY Q + EA +F M
Sbjct: 144 NTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM------ 197
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ NTI +N++I ++ + G + KA ++
Sbjct: 198 PER-------------------------------NTIA--SNSMIALFGRKGCVEKARRI 224
Query: 133 FENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F + + + +++W+ M++ + +G EAL +F M+ + V +E+ ++ LSAC V
Sbjct: 225 FNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVL 284
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE+G R+ + + + G+E + +I L G + +A ++ + W S+
Sbjct: 285 NVEMG-RWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSM 343
Query: 251 LAASNIYGDVELGE 264
++ G ++ E
Sbjct: 344 ISGYLRCGSIQDAE 357
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 227/330 (68%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ Y K G +++ R +F+ M ++V++W+ +IAGYAQ + NEA+ LF M+ +KP+
Sbjct: 269 MLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPN 328
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ +++ LSACAQLG+VE GE I +Y+E GL + V + +AL+ MY+K G I KA Q+F+
Sbjct: 329 DVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFD 388
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + +TW +MI GLA++G +A+ +++RM+ VKPN ITF+ +++AC H G VEL
Sbjct: 389 KLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVEL 448
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +F M+S + I P IE + C++DL R+G L +A + + RM E N IWG+LL+AS
Sbjct: 449 GLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSAS 508
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+ +VEL E A + L++LEP NSGNY ILSNIYA GRW E+ K+RK+M+D V+K
Sbjct: 509 RIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAA 568
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
S++EV RVH+F+ GDTSHP D +Y +
Sbjct: 569 YSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 598
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 149/250 (59%), Gaps = 2/250 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N +++ Y++ G++ AR LF+ M +++++SW +I+ YAQ ++ +F+RMQ E
Sbjct: 165 YNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMC 224
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+EI + LS CA+LG +E+G I + L + + ++ A+++MY K G +
Sbjct: 225 EPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 284
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M + V+TW+ MIAG A +G EAL++F M+ A++KPN++T +++LSAC +G
Sbjct: 285 VFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGS 344
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R + ++SR G+ + ++ + + G + +A ++ ++P N W S++
Sbjct: 345 VETGERIGSYVESR-GLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT-WNSMI 402
Query: 252 AASNIYGDVE 261
I G E
Sbjct: 403 MGLAINGFAE 412
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 150/346 (43%), Gaps = 83/346 (23%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR +F+ + + + I Y+++ NEA+ F M NV+ + +CA
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------------------- 122
L A+++G+ +H+ + +YG ++ V NALI+ YAK
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 123 ------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
SG++ A ++F+ M+++S+++W MI+ A +G + +F RM+ +PNE
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 177 ITFIAILSACCHVGLVELGRRY----------FNIMKSRYGIE-----PKIEQYGCMIDL 221
IT +LS C +G +E+G R N++ S +E ++ + D
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 222 LGR----------AGYLQ-----EAEKLLRRMP---FEANAAIWGSLLAASNIYGDVELG 263
+ R AGY Q EA +L M + N S+L+A G VE G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348
Query: 264 ECALQHLIKLEPHNSGNY----AILSNIY---AILGRWNESGKIRK 302
E G+Y ++SN+Y A+LG +++ G I K
Sbjct: 349 E------------RIGSYVESRGLISNVYVASALLGMYSKCGNIIK 382
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+K G++ AR +F+ + +++ ++W ++I G A +AI L+ RM+ VK
Sbjct: 368 SALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVK 427
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ I + ++AC G VELG E+ + + ++ + ++D++ +SG++ A +
Sbjct: 428 PNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYE 487
Query: 132 VFENMK-NKSVITWTTMIAGLALH 154
M+ +V+ W T+++ +H
Sbjct: 488 FICRMEVEPNVVIWGTLLSASRIH 511
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 233/358 (65%), Gaps = 8/358 (2%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT S +L N + DL+N R L ++ + SWT++IAGY Q + EAI
Sbjct: 162 FTCSSVLRACLNLL--------DLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIH 213
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LF +M+ VK +E+ ++A L+ACA LGA++LG IH Y ++G V ++N LIDMY
Sbjct: 214 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 273
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G + +A +VFE M+ ++V++W+ MI GLA+HG EAL +FS M + ++PN +TFI
Sbjct: 274 KCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIG 333
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+L AC H+GL+ GRR+F M YGI P+IE YGCM+DLL RAG L EA + + MP +
Sbjct: 334 LLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK 393
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
N +WG+LL A ++ +VE+ E A++HL++L+P N G Y +LSNIYA GRW ++ ++R
Sbjct: 394 PNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVR 453
Query: 302 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
K M+D VKK PG S I V VHEFVAG+ SHPD ++++Q ++ +M+ ++ N
Sbjct: 454 KFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 511
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 216/350 (61%), Gaps = 1/350 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+AGYAKVG+L A FE M ++++SW ++IAGYAQ LF M EN+
Sbjct: 299 WNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENI 358
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + ++ +SA A++GA+ G WIH ++ + + L +A IDMY K G I +A
Sbjct: 359 WPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACM 418
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + K V WTTMI G A HG G +AL +F M+ V PN++TF+A+L+AC H G
Sbjct: 419 VFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQE-YVMPNQVTFVAVLTACSHSGF 477
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G R FN MK RYGIEP +E YGC++DLLGR+G E + ++ MP + + +IWG++L
Sbjct: 478 VSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVL 537
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A YG++E+ E A + L+KLEP G Y +LSNIYA GRW S KIR++M GVKK
Sbjct: 538 SACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKK 597
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
GCS + V +HEFVA D HP + + IL + +MK E+
Sbjct: 598 TAGCSSVVVDGIIHEFVAADKRHPRWIEIQSILFCLKSEMKLGTDFLLEY 647
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 45/328 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y + + A +F+ M + +S+ +I GYA+ EA+ M +K
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDM----------- 119
PDE ML L C +LG +LG+ +H +IE+ GL ++ + LNNAL+DM
Sbjct: 226 PDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQ 285
Query: 120 --------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
YAK G + A FE+M + +++W ++IAG A G
Sbjct: 286 SIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLM 345
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GC 217
+F M + P+ +T I ++SA +G + GR I ++ KI+ +
Sbjct: 346 VQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRW---IHGWVVRMQMKIDAFLGSA 402
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 277
ID+ + G ++ A + R + E + +W +++ +G G ALQ +++ +
Sbjct: 403 FIDMYWKCGSIKRACMVFREVT-EKDVTVWTTMITGFAFHG---YGSKALQLFYEMQEYV 458
Query: 278 SGNYAILSNIYAILGRWNESGKIRKVMR 305
N A+L + SG + + +R
Sbjct: 459 MPNQV---TFVAVLTACSHSGFVSQGLR 483
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 14/265 (5%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAI 60
F +SRL+ + + +L+ A LF T N+ + T+I+ + N++
Sbjct: 64 FPMSRLI------LFSAITHPENLDMAVLLFRHHTPHPNLYIYNTMISALSL--SLNQSF 115
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+ + + P+ L L A L V IH + G L N L+ +Y
Sbjct: 116 AFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ---IHCHAIITGSFYYGYLQNTLMKIY 172
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
++ K+G A QVF+ M +++ MI G A G EAL M +KP+E T +
Sbjct: 173 LENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTML 232
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+L C +G +LG+ ++ R I+ + ++D+ + L+ A+ + +
Sbjct: 233 GLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVI- 291
Query: 240 FEANAAIWGSLLAASNIYGDVELGE 264
+ W +++A G++E+
Sbjct: 292 VRKDTISWNTMIAGYAKVGNLEIAH 316
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 232/361 (64%), Gaps = 4/361 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN ++ AK G ++ AR LF+ M EKNVISW+ +I GY + A++LFR +Q
Sbjct: 129 WNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEG 188
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++P+E M + LSACA+LGA++ G+W+H YI++ G+ V L +LIDMYAK G I +
Sbjct: 189 SQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIER 248
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A +F+N+ K V+ W+ MI ++HGL E L++F+RM V+PN +TF+A+L AC
Sbjct: 249 AKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACV 308
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV G YF M + YG+ P I+ YGCM+DL RAG +++A +++ MP E + IW
Sbjct: 309 HGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIW 368
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LL + I+GDVE E A+ L++L+P NS Y +LSN+YA LGRW E +R +M
Sbjct: 369 GALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVR 428
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 367
G+KK+PGCS +EV + EF AGD SHP+ LY +L +I +++ + +N +L+
Sbjct: 429 GIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDL 488
Query: 368 D 368
D
Sbjct: 489 D 489
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF---SR 166
+P NA+I AK+G I A ++F+ M K+VI+W+ MI G G + AL +F
Sbjct: 126 LPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQT 185
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
+E ++++PNE T ++LSAC +G ++ G ++ + + G++ + +ID+ + G
Sbjct: 186 LEGSQLRPNEFTMSSVLSACARLGALQHG-KWVHAYIDKTGMKIDVVLGTSLIDMYAKCG 244
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
++ A+ + + E + W +++ A +++G E EC
Sbjct: 245 SIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSE--EC 281
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 143/321 (44%), Positives = 219/321 (68%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ D+N AR +F+ M + ++S+ +I GYA+ QPNEA++LFR +Q N++P
Sbjct: 170 TLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEP 229
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ ML+ + +CA LGA++LG+WIH Y+++ G + V +N ALIDM+AK G + A+ +F
Sbjct: 230 TDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIF 289
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
E M+ + W+ MI A HG G +A+ MF M+R V+P+EITF+ +L AC H GLVE
Sbjct: 290 EGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVE 349
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR YF M YGI P I+ YGCM+DLLGRAG+L EA + ++ +A +W +LL+A
Sbjct: 350 QGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSA 409
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ +G+VE+ + ++ + +L+ + G+Y ILSN+YA +GRW + +RK+M+D GV K+P
Sbjct: 410 CSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVP 469
Query: 314 GCSYIEVSKRVHEFVAGDTSH 334
GCS +EV+ VHEF +GD H
Sbjct: 470 GCSSVEVNNVVHEFFSGDGVH 490
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 123/235 (52%), Gaps = 2/235 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
+++A LF+ + +K++I + + GYA+ + P A +LF + + PD+ + L A
Sbjct: 80 MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA A+ G +H + + GLN + + LI+MYA+ + A VF+ M+ ++++
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSY 199
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
+I G A EAL +F ++ + ++P ++T ++++ +C +G ++LG+ +K
Sbjct: 200 NAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKK 259
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ G + ++ +ID+ + G L +A + M A W +++ A +GD
Sbjct: 260 K-GFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQA-WSAMIVAFATHGD 312
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 229/351 (65%), Gaps = 2/351 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YA +G L++AR+LF+ + K+ + W +I GY Q +PNEA+ LFRRM V+
Sbjct: 457 TAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVE 516
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ ++ LSA AQLG VE G+W+H+Y++ + V + ALIDMY K G +G A+
Sbjct: 517 PDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVD 576
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + +K ++ W MI G A+HG R+AL+MF + + P +ITFI +L+AC H G+
Sbjct: 577 VFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGM 636
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR +F M+ YGI+PKIE YGCM+DLLGRAG ++EA L++ M +A +W SLL
Sbjct: 637 VEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLL 696
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+ G++K
Sbjct: 697 AACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQK 756
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 361
PGCS IE+ + V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 757 EPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTEL 807
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA G L+ + AL + I +T+ I ++ A+ L M + + P
Sbjct: 332 AYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHT 391
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM- 136
+ A+L AC L G +H Y + L + AL+ MYA++G A +F++M
Sbjct: 392 LSASLPACRGLSP---GRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDML 448
Query: 137 -------------------------------KNKSVITWTTMIAGLALHGLGREALDMFS 165
K + W MI G HG EAL +F
Sbjct: 449 PDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFR 508
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
RM + V+P+E+T + +LSA +G VE G+ + +K+ ++ + +ID+ +
Sbjct: 509 RMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKC 568
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
G L +A + + + + +W +++ ++GD
Sbjct: 569 GSLGDAVDVFHGIG-DKDIVVWNAMINGYAMHGD 601
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
+L + ++ Y K G L +A +F + +K+++ W +I GYA +A+ +F +
Sbjct: 552 QLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQ 611
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+ + + P +I + L+AC+ G VE G E+ + +YG++ + ++D+ ++G
Sbjct: 612 SREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAG 671
Query: 125 KIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGREALD 162
I +A + ++MK + W +++A LH LG++ D
Sbjct: 672 LIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIAD 713
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 210/323 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G + AR LF LM KN++SW ++I+G A EA+ +FRRMQ +K
Sbjct: 277 NALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLK 336
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++ L++CA LG +ELG+W+H+YI++ + + NAL+DMYAK G I +A V
Sbjct: 337 PDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMV 396
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K V ++T MI G A+HG AL +FS M R V+P+ +T + +LSAC H GL+
Sbjct: 397 FQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLL 456
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR+F M Y ++P+ E YGCM+DLLGRAG + EAE +MP +A++WGSLL
Sbjct: 457 EEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLG 516
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ VELGE +Q LI++EP G Y ++SNIY+ RW ++ K RK M+ +KK
Sbjct: 517 ACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKT 576
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP 335
PGCS IEV VHEF G+ SHP
Sbjct: 577 PGCSSIEVDGMVHEFRKGEKSHP 599
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G + +F+ ++ISWTTLI Y++M P+EAI F RM N
Sbjct: 177 NTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCT 233
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKAL 130
D + ++ LSAC+QLG LG+ I Y++ + +++ V L NAL+DMY K G+ A
Sbjct: 234 ADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLAR 293
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
Q+F M K++++W +MI+GLA GL +EAL MF RM+ +KP+ +T + +L++C ++G
Sbjct: 294 QLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLG 353
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRM 238
+ELG+ + + + K + Y ++D+ + G + +A + + M
Sbjct: 354 DLELGKWVHSYIDKNHM---KADGYVANALVDMYAKCGSIDQAFMVFQAM 400
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+L+R+M + + PD + L AC+Q A IH + + GL++ + + N L+
Sbjct: 123 FSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRF 182
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
YA SG I +VF+ + +I+WTT+I + G EA+ F RM + +T
Sbjct: 183 YAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMN---CTADRMTL 239
Query: 180 IAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ +LSAC +G LG++ M + + + ++D+ + G A +L M
Sbjct: 240 VVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLM 299
Query: 239 PFEANAAIWGSLLA 252
P + N W S+++
Sbjct: 300 PVK-NLVSWNSMIS 312
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 236/359 (65%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD +A +FELM E+++++W ++I G+A +PNEA+TLFR M VE V+
Sbjct: 157 NSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVE 216
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ LSA A+LGA+ELG +H Y+ + GL+ + N+L+D+YAK G I +A +V
Sbjct: 217 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRV 276
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++ ++WT++I GLA++G G EAL++F ME + P+EITF+ +L AC H G++
Sbjct: 277 FSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGML 336
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK GI P+IE YGCM+DLL RAG +++A + ++ MP + NA IW +LL
Sbjct: 337 DEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 396
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G + LGE A HL+ LEP +SG+Y +LSN+YA RW++ IR+ M GVKK
Sbjct: 397 ACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKT 456
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
PG S +E+ RV+EF GD SHP +Y +L KI +K + H N + + E +
Sbjct: 457 PGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEE 515
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ A +F ++ NV +W T+I GYA+ D P+ A +R+M V V+PD L A
Sbjct: 68 MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA 127
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
++ V GE IH+ + G ++V + N+L+ +YA G A +VFE MK + ++ W
Sbjct: 128 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAW 187
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
+MI G AL+G EAL +F M V+P+ T +++LSA +G +ELGRR ++
Sbjct: 188 NSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRR-VHVYLL 246
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+ G+ ++DL + G ++EA+++ M E NA W SL+ + G GE
Sbjct: 247 KVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS-ERNAVSWTSLIVGLAVNG---FGE 302
Query: 265 CALQHLIKLE 274
AL+ ++E
Sbjct: 303 EALELFKEME 312
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 223/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV+GY K GD+ AR LF+ M KN++SWT +++GYA +AI F +M+ +
Sbjct: 77 WSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGL 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ +++ L++CA+ G + LG+ +H IE+ V ++NAL+DMYAK G++ +AL
Sbjct: 137 KPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALS 196
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M K +++W M+ GLA+HG G +AL +FS M + +P+++T +A+L AC H G
Sbjct: 197 VFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGF 256
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G RYFN M+ YGI P IE YGCM+DLLGR G L+EA +L++ MP E N IWG+LL
Sbjct: 257 VDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLL 316
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ V L E L L KLEP + GNY++LSNI+A G W+ +R M++ G++K
Sbjct: 317 GACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQK 376
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S IEV VHEF D SHP D++YQ++ ++ +K
Sbjct: 377 PSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLK 417
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 130/245 (53%), Gaps = 27/245 (11%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL-G 89
LF++M E++V+SW ++I G ++ + +EA LF DE+ M A+S L G
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLF----------DEMPMKDAVSWNTILDG 52
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNN-----ALIDMYAKSGKIGKALQVFENMKNKSVITW 144
V+ GE + +GL +P N ++ Y K+G + A +F+ M K++++W
Sbjct: 53 YVKAGE----MNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSW 108
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMK 203
T +++G A+ GL ++A+ F +ME A +KP++ T I+IL++C GL+ LG+R + +I +
Sbjct: 109 TIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIER 168
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
RY + ++D+ + G + A + M + + W +L ++G G
Sbjct: 169 IRYKCSVNVSN--ALVDMYAKCGQVDRALSVFNGMS-KKDLVSWNCMLQGLAMHGH---G 222
Query: 264 ECALQ 268
E ALQ
Sbjct: 223 EKALQ 227
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 230/351 (65%), Gaps = 1/351 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M++GYAK+G + +AR +F+ M E++++ W+ +I+GYA+ DQP EA+ LF M + PD
Sbjct: 294 MLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPD 353
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+I ML+ +SAC+ +GA+ WIH Y+++ G + +NNALIDMYAK G + KA +VFE
Sbjct: 354 QITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFE 413
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
NM K+VI+W++MI A+HG A+ +F RM+ ++PN +TFI +L AC H GLVE
Sbjct: 414 NMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEE 473
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G + F+ M + +GI P E YGCM+DL RA +L++A +L+ MPF N IWGSL++A
Sbjct: 474 GEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSAC 533
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G+ ELGE A + L++LEP + G +LSNIYA RWN+ G IRK M G+ K
Sbjct: 534 QVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKA 593
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
S IE++ +VH F+ D H D +Y+ L ++ ++K + + SG+L
Sbjct: 594 SSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGY-KPSTSGIL 643
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 33/278 (11%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A YA + +AR LF+ M + ++W +I GY Q ++A+ LF M+ ++KPD
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM--------------- 119
+ + LSAC G + G IH +++ G L ALI+M
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYD 281
Query: 120 ----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
YAK G + A +F+ M + ++ W+ MI+G A +EAL +
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M + R P++IT ++++SAC HVG + + + R G + +ID+
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYA 400
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G L +A ++ MP N W S++ A ++G+ +
Sbjct: 401 KCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNAD 437
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G+L AR +FE M KNVISW+++I +A + AI LFRRM+ N++
Sbjct: 393 NALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIE 452
Query: 73 PDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L AC G VE GE + + I ++G++ ++D+Y ++ + KA++
Sbjct: 453 PNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIE 512
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ E M +VI W ++++ +H G L F+ ++P+ + +LS
Sbjct: 513 LIETMPFAPNVIIWGSLMSACQVH--GEAELGEFAAKRLLELEPDHDGALVVLS 564
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 56 PNEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
P + I L+ ++ N D + + L A +++ A G IH + G +
Sbjct: 101 PEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQT 160
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
LI MYA +I A +F+ M + + W +I G +G +AL +F M + +KP
Sbjct: 161 GLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKP 220
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
+ + +LSAC H G + GR +K Y I+ ++ +I++ G + A K
Sbjct: 221 DSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQT--ALINMYANCGAMDLARK 278
Query: 234 L 234
+
Sbjct: 279 I 279
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 224/332 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV GYA+ AR +F+ M EK+V+SW+ +I+GYA +QPNEA++LF MQ ++
Sbjct: 241 TAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIR 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ ML+ +SACA LG+++ +WIH +I+ GLN I+ + NALIDM+AK G I AL +
Sbjct: 301 PDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNI 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+VITWT+MI A+HG G+ AL +F +M V+PNE+TF+ +L ACCH GLV
Sbjct: 361 FNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLV 420
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR F+ M +YGIEPK E YGCM+DLLGRA +QEA L+ M N +WGSLLA
Sbjct: 421 HEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLA 480
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GD++LG A + +++L+P++ G +LS IY N++ ++R VM+ GV K
Sbjct: 481 ACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKE 540
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S++++++ HEF AG +P+ D+++Q L
Sbjct: 541 TGLSWMDLNEPFHEFTAGGEKYPENDKIFQKL 572
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 138/289 (47%), Gaps = 33/289 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YA G + +AR +F+ M ++V+SW ++ Y Q EA+ F +M+ V
Sbjct: 109 TALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVL 168
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------- 119
D++ + LSAC + + G+ IH+Y+ + L++ALI++
Sbjct: 169 SDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKL 228
Query: 120 ------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
YA++ K A +F+ M K V++W+ MI+G A EAL
Sbjct: 229 YNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEAL 288
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F+ M+ ++P+E+T ++++SAC ++G ++ + +K+ G+ + +ID+
Sbjct: 289 SLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNN-GLNKILHICNALIDM 347
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ G + A + MP + N W S++ A ++GD + C + +
Sbjct: 348 FAKCGGINLALNIFNEMP-QKNVITWTSMITAFAMHGDGKSALCLFEQM 395
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
L+++L+ N ++ +AK G +N A +F M +KNVI+WT++I +A A+ LF
Sbjct: 334 LNKILH-ICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLF 392
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAK 122
+M+ E V+P+E+ L L AC G V G + + ++QYG+ ++D+ +
Sbjct: 393 EQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGR 452
Query: 123 SGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
+ + +A+ + E+M +V W +++A +HG + L F+ + ++ PN
Sbjct: 453 AKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLK--LGAFAAKKILQLDPNHDGASV 510
Query: 182 ILS 184
+LS
Sbjct: 511 LLS 513
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 59 AITLFRRMQVENVKPDEI-AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
A RR + P + A+L + + C GA G H + G + AL+
Sbjct: 55 ACACLRRTGLPPPGPRALPALLRSAARCVGAGAYVRGA--HALAFRVGSLDDGFVRTALV 112
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
YA G +G A +VF+ M + V++W M+ +EAL F++M+ + V +++
Sbjct: 113 GAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQL 172
Query: 178 TFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+LSAC H+ + G+ + M S I + +I+L ++ AEKL
Sbjct: 173 ILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSS--ALINLYASCASMEMAEKLYN 230
Query: 237 RMP 239
MP
Sbjct: 231 GMP 233
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 154/348 (44%), Positives = 227/348 (65%), Gaps = 7/348 (2%)
Query: 12 WNTMVAGYAKVGD-------LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
W +++GY VG A ++F+ M EK+++SW+++I GYA P EA+ LF
Sbjct: 177 WTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFF 236
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+M E +PD AM+ L ACA+LGA+ELG W N +++ L ALIDMYAK G
Sbjct: 237 KMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCG 296
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
++ A +VF M+ K ++ W I+GLA+ G + A +F +ME++ ++P+ TF+ +L
Sbjct: 297 RMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLC 356
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ GR+YFN M+ + + P+IE YGCM+DLLGRAG+L EA +L++ MP EANA
Sbjct: 357 ACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANA 416
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
+WG+LL ++ D +L E L+ LI LEP NSGNY +LSNIY+ +W ++ KIR +M
Sbjct: 417 IVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIM 476
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ G+KK+PG S+IEV VHEF+ GDTSHP +++Y L ++ +K
Sbjct: 477 SERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLK 524
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G+ N + +F E N+ + T+I G D E+I ++ M+ E + PD L
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA+L +LG +H + + G + +N +L+ +Y K G I A +VF+++ K+V
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVA 175
Query: 143 TWTTMIAGLALHGLGREALDMFSR--------MERARV---------------------- 172
WT +I+G G REA+DMF R +E+ V
Sbjct: 176 AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235
Query: 173 --------KPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLG 223
+P+ + +L AC +G +ELG N+M ++ + P + +ID+
Sbjct: 236 FKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGT--ALIDMYA 293
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + A ++ R M + + +W + ++ + G V+
Sbjct: 294 KCGRMDSAWEVFRGMR-KKDIVVWNAAISGLAMSGHVK 330
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + + GL+ L N ++ G + ++F K ++ + TMI GL L+
Sbjct: 29 VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDS 88
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+E+++++ M + + P+ TF +L AC + +LG + ++ + G E
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLV-VKAGCESDAFVNT 147
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
++ L G+ G++ A K+ +P E N A W ++++ G + +G+C
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIIS-----GYIGVGKC 190
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/338 (46%), Positives = 219/338 (64%), Gaps = 6/338 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A L E ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 243 KIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 302
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV----PLNNALIDMYAKSGK 125
P+++ ML+ L ACA LGA+++G WIH YI++ +V L +LIDMYAK G
Sbjct: 303 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGD 362
Query: 126 IGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I A QV ++ N+S+ TW MI G A+HG A D+FSRM + ++P++ITF+ +LS
Sbjct: 363 IDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 422
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H G+++LGR F M+ Y I PK+E YGCMIDLLG +G +EAE+++ MP E +
Sbjct: 423 ACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDG 482
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
IW SLL A I+G++ELGE + LIK+EP N G+Y +LSNIYA G+WNE KIR ++
Sbjct: 483 VIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLL 542
Query: 305 RDMGV-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
D G+ KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 543 NDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 145/250 (58%), Gaps = 3/250 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + +A+ +F+ + K+V+SW +I+GYA+ +A+ LF+ M NV
Sbjct: 144 YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNV 203
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE M +SACAQ G++ELG +H++I +G + + + NALID+Y+K G++ A +
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+ E + NK VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323
Query: 192 VELGRR-YFNIMKSRYG--IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+++GR + I K G + +ID+ + G + A ++ F + + W
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383
Query: 249 SLLAASNIYG 258
+++ ++G
Sbjct: 384 AMIFGFAMHG 393
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N + W + G+A P A+ L+ M + P+ L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN------ 138
CA+ + G+ IH ++ + G + + ++ +LI MYA++G++ A +VF+ +
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 139 -------------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
K V++W MI+G A G ++AL++F M + VK
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T ++SAC G +ELGR+ + + +G ++ +IDL + G ++ A +
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWIND-HGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 234 LLRRMPFEANAAIWGSLLAA 253
LL + + W +L+
Sbjct: 264 LLEGLS-NKDVISWNTLIGG 282
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 225/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ G+ K D+ AR +F+ M +N +SWT +I GY Q + P + LF+ M+ E
Sbjct: 172 WTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGK 231
Query: 72 K-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P I ++A LS CA +GA +LG +H Y+ + L+ V +NNAL+DMYAKSG + AL
Sbjct: 232 DWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLAL 291
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + V +WTTMI+GLALHG G AL+ FS M ++ V PNE+T +++LSAC H G
Sbjct: 292 KIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAG 351
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR F M +GI+PKI+ YGCM+DLLGRAG L+EA++L+ MP + ++ IW SL
Sbjct: 352 LVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSL 411
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++G++ L E A + +I+LEP + G Y +L NIY RW ++ K RK MRD VK
Sbjct: 412 LSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVK 471
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS++EV+ VHEF+A D H +Y +L I QMK
Sbjct: 472 KKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 513
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
L K NT Y ++G +A+ +F + +++SWT LI+ Y QP +A ++F
Sbjct: 38 HLACKLLNT----YTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSH 93
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
+ ++PD ++ A+SAC + G +H + ++ L + + NALIDMY++SG
Sbjct: 94 LFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGA 153
Query: 126 IGKALQVFENMKNKSV-------------------------------ITWTTMIAGLALH 154
I A VF+ M+ K V ++WT MI G
Sbjct: 154 IEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQG 213
Query: 155 GLGREALDMFSRMERARVK--PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+ L++F M RA K P IT +A+LS C +G +LG + ++ ++ +
Sbjct: 214 EVPIPGLELFQEM-RAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYV-NKTNLDLDV 271
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++D+ ++G L A K+ + MP + + W ++++ ++G
Sbjct: 272 TVNNALMDMYAKSGALVLALKIFQEMP-KRDVFSWTTMISGLALHG 316
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFSRMERARVKP 174
L++ Y + G A +VF +++N +++WT +I+ L LH +A +FS + + ++P
Sbjct: 43 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLIS-LYLHTSQPCKAFSIFSHLFHSGLRP 101
Query: 175 NEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
+ + +SAC H + GR + + G +P + +ID+ R+G ++ A
Sbjct: 102 DSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGN--ALIDMYSRSGAIEVACS 159
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + M + + + W SLL D+E
Sbjct: 160 VFKTMEIK-DVSSWTSLLNGFIKCNDIE 186
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 228/355 (64%), Gaps = 7/355 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN++V YAK G +++AR LF+ M E+NVISW+ LI GY + EA+ LFR MQ+
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 71 ----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
V+P+E M LSAC +LGA+E G+W+H YI++Y + + L ALIDMYAK G +
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 127 GKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILS 184
+A +VF + K V ++ MI LA++GL E +FS M + + PN +TF+ IL
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + MP E +
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E IR M
Sbjct: 371 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEM 430
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G+ K+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++ +
Sbjct: 431 EVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----- 109
Q + I+++ RM+ V PD L + + LG+ H I +GL+
Sbjct: 42 QRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRT 101
Query: 110 --------------------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
+P N++++ YAK+G I A ++F+ M ++VI+
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 144 WTTMIAGLALHGLGREALDMFSRME-----RARVKPNEITFIAILSACCHVGLVELGRRY 198
W+ +I G + G +EALD+F M+ A V+PNE T +LSAC +G +E G ++
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KW 220
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +Y +E I +ID+ + G L+ A+++ + + + + +++ +YG
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 224/348 (64%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K L AR LF+ + +++++SWT++I+G Q QP +++ LF MQ+ V+
Sbjct: 242 NALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVE 301
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + + LSACA LGA++ G W+ YIE+ G+ + + AL+DMYAK G I AL +
Sbjct: 302 PDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHI 361
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N+++ TW ++ GLA+HG G EAL F M A ++PNE+TF+AIL+ACCH GLV
Sbjct: 362 FNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLV 421
Query: 193 ELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
GR YF M S+ + P++E YGCMIDLL RAG L EA K +R MP + IWG+LL
Sbjct: 422 AEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALL 481
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A G+VEL + L HL++L+ +SG Y +LSNIYA RW++ ++R++M+D G++K
Sbjct: 482 SACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRK 541
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IEV HEF+ GDT+H + ++ +L + Q+ H
Sbjct: 542 FPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGHFST 589
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 142/258 (55%), Gaps = 8/258 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+ G A +F+ M ++V+SWT LI+GY + +EAI LF +M +V
Sbjct: 144 NSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKM---DVV 200
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L AC ++G + +G+ +H + + + + NAL+DMY K + +A ++
Sbjct: 201 PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKL 260
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++ +++WT++I+GL +++L++F M+ + V+P+ I ++LSAC +G +
Sbjct: 261 FDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGAL 320
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+ R GIE I ++D+ + G ++ A + +P N W +LL
Sbjct: 321 DYG-RWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP-NRNIFTWNALLG 378
Query: 253 ASNIYGDVELGECALQHL 270
++G G AL+H
Sbjct: 379 GLAMHGH---GHEALKHF 393
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
Query: 32 FELMTEKNV----ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
F+ + + ++ + + TLIA YA P A ++ R+ PD L AC +
Sbjct: 58 FDFLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTK 117
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
V+ GE +H + G + + N+L+ Y+ GK G A +VF+ M + V++WT +
Sbjct: 118 FLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGL 177
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR-Y 206
I+G GL EA+++F +M+ V PN TF+++L AC +G + +G+ ++ R +
Sbjct: 178 ISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAF 234
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GI + ++D+ + L EA KL +P + + W S+++
Sbjct: 235 GIGLVVGN--ALVDMYVKCECLCEARKLFDELP-DRDIVSWTSIISG 278
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/342 (47%), Positives = 221/342 (64%), Gaps = 2/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
W M+ GY+ G+L++AR+LF+ M EKN+ SW +I+GY Q QP EA+ LF MQ +
Sbjct: 393 WTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTS 452
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PDE+ +++ L A A LGA++LG W+H ++ + L+ + ALIDMYAK G+I K+
Sbjct: 453 LEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSR 512
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+NM K +W +I A++G +EAL +F M PNEIT I +LSAC H G
Sbjct: 513 GVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSG 572
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+R+F M+ +G+ PKIE YGCM+DLLGRAG LQEAEKL+ MP+EAN I S
Sbjct: 573 LVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSF 631
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A DV E L+ IK+E N GNY +L N+YA RW E+ +++ +MR GVK
Sbjct: 632 LFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVK 691
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K GCS IEV RV EFVAGD HP ++ ++ +L ++ MK
Sbjct: 692 KEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 733
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 11/245 (4%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G ++ AR LF+ M +++ +SWT LI GY + + A LF +M ++ D
Sbjct: 303 LVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKD 358
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
A + A +LG + + + + + + + +I Y+ +G + A +F+
Sbjct: 359 SAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWT----IMIYGYSSNGNLDSARSLFD 414
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVE 193
M K++ +W MI+G + EAL +F M+ ++P+E+T +++L A +G ++
Sbjct: 415 AMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALD 474
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
LG ++ R ++ +ID+ + G + ++ + MP E A W +L+ A
Sbjct: 475 LGGWVHRFVR-RKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMP-EKETASWNALINA 532
Query: 254 SNIYG 258
I G
Sbjct: 533 FAING 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 19 YAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEI 76
Y + + +AR +F+ ++ ++I Y M Q +E+ L+R ++ + PD
Sbjct: 204 YDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSF 263
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+CA A+ G+ IH+++ G + AL+DMYAK GK+ A ++F+ M
Sbjct: 264 TFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEM 323
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
++S ++WT +I G G A +F +M ++ + F ++ A +G + R
Sbjct: 324 IDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSAR 379
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA--- 253
+ F+ M R + I YG G L A L MP E N W ++++
Sbjct: 380 KLFDEMPERSVVSWTIMIYG-----YSSNGNLDSARSLFDAMP-EKNLFSWNAMISGYXQ 433
Query: 254 -SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
Y ++L +Q LEP ++L I A LG + G + + +R + +
Sbjct: 434 NKQPYEALKLFH-EMQSTTSLEPDEVTIVSVLPAI-ADLGALDLGGWVHRFVRRKKLDRA 491
Query: 313 P--GCSYIEVSKRVHEFV 328
G + I++ + E V
Sbjct: 492 TNVGTALIDMYAKCGEIV 509
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 225/330 (68%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ Y K G +++ R +F+ M ++V+ W+ +IAGYAQ + NEA+ LF M+ +KP+
Sbjct: 47 MLEMYVKCGAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPN 106
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ +++ LSACAQLG+VE GE I +Y+E GL + V + +AL+ MY+K G I KA Q+F+
Sbjct: 107 DVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFD 166
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + +TW +MI GLA++G +A+ +++RM+ VKPN ITF+ +L+AC H G VEL
Sbjct: 167 KLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVEL 226
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +F M+S + I P IE + C++DL R+G L +A + + RM E N IWG+LL+AS
Sbjct: 227 GLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSAS 286
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+ +VEL E A + L++LEP NSGNY ILSNIYA RW E+ K+RK+M+D V+K
Sbjct: 287 RIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAA 346
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
S++EV RVH+F+ GDTSHP D +Y +
Sbjct: 347 YSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 376
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PBEI + LS CA+LG +E+G I + L + + ++ A+++MY K G +
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M + V+ W+ MIAG A +G EAL++F M+ A++KPN++T +++LSAC +G
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS 122
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R + ++SR G+ + ++ + + G + +A ++ ++P N W S++
Sbjct: 123 VETGERIGSYVESR-GLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT-WNSMI 180
Query: 252 AASNIYGDVELGECALQHL--IKLEPHN 277
I G E + I+++P+N
Sbjct: 181 MGLAINGFAEDAIALYNRMKEIEVKPNN 208
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 231/352 (65%), Gaps = 13/352 (3%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNAR-------------ALFELMTEKNVISWTTLIAGYAQ 52
R+ N ++ ++K GD++ AR LF+ M EK+V+ W +I G Q
Sbjct: 214 RMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQ 273
Query: 53 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 112
+ +A+ LF+ MQ N PDEI M+ LSAC+QLGA+++G WIH YIE++ L+ V L
Sbjct: 274 AKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVAL 333
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+L+DMYAK G I +AL VF ++ ++ +T+T +I GLALHG A+ F+ M A +
Sbjct: 334 GTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 393
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
P+EITFI +LSACCH G+++ GR YF+ MKSR+ + P+++ Y M+DLLGRAG L+EA+
Sbjct: 394 APDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD 453
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
KL+ MP EA+AA+WG+LL ++G+V+LGE A + L++L+P +SG Y +L +Y
Sbjct: 454 KLMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEAN 513
Query: 293 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
W ++ + R++M + GV+K+PGCS IEV+ V EF+ D S P+ +++Y L
Sbjct: 514 MWEDAKRARRMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCL 565
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 143/269 (53%), Gaps = 21/269 (7%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L+ N + +A G++ NAR +F+ ++++SW LI GY ++ + +AI +++ M
Sbjct: 114 LVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVM 173
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ E VKPD++ M+ +S+CA LG + G+ + Y++ GL +PL NAL+DM++K G I
Sbjct: 174 ESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDI 233
Query: 127 GKALQVFEN-------------MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
+A ++F+N M+ K V+ W MI G ++AL +F M+ +
Sbjct: 234 HEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTD 293
Query: 174 PNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
P+EIT I LSAC +G +++G RY ++ + + ++D+ + G + E
Sbjct: 294 PDEITMIHCLSACSQLGALDVGIWIHRYIE----KHSLSLNVALGTSLVDMYAKCGNISE 349
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGD 259
A + + N+ + +++ ++GD
Sbjct: 350 ALCVFHGIQTR-NSLTYTAIIGGLALHGD 377
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDEIAMLAA 81
LN + + + N SW I G+++ + P +A+ +++M +PD
Sbjct: 28 LNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVL 87
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
CA L LG I ++ + L + ++NA I M+A G++ A +VF+ + +
Sbjct: 88 FKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDL 147
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
++W +I G G G +A++++ ME VKP+++T I ++S+C +G + G+ ++
Sbjct: 148 VSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEY 207
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+K+ G+ I ++D+ + G + EA ++
Sbjct: 208 VKAN-GLRMTIPLANALMDMFSKCGDIHEARRIF 240
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/342 (47%), Positives = 221/342 (64%), Gaps = 2/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
W M+ GY+ G+L++AR+LF+ M EKN+ SW +I+GY Q QP EA+ LF MQ +
Sbjct: 219 WTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTS 278
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PDE+ +++ L A A LGA++LG W+H ++ + L+ + ALIDMYAK G+I K+
Sbjct: 279 LEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSR 338
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+NM K +W +I A++G +EAL +F M PNEIT I +LSAC H G
Sbjct: 339 GVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSG 398
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+R+F M+ +G+ PKIE YGCM+DLLGRAG LQEAEKL+ MP+EAN I S
Sbjct: 399 LVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSF 457
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A DV E L+ IK+E N GNY +L N+YA RW E+ +++ +MR GVK
Sbjct: 458 LFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVK 517
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K GCS IEV RV EFVAGD HP ++ ++ +L ++ MK
Sbjct: 518 KEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 559
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G ++ AR LF+ M +++ +SWT LI GY + + A LF +M ++
Sbjct: 127 TALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IE 182
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D A + A +LG + + + + + + + +I Y+ +G + A +
Sbjct: 183 KDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWT----IMIYGYSSNGNLDSARSL 238
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGL 191
F+ M K++ +W MI+G + EAL +F M+ ++P+E+T +++L A +G
Sbjct: 239 FDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGA 298
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG ++ R ++ +ID+ + G + ++ + MP E A W +L+
Sbjct: 299 LDLGGWVHRFVR-RKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMP-EKETASWNALI 356
Query: 252 AASNIYG 258
A I G
Sbjct: 357 NAFAING 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 19 YAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEI 76
Y + + +AR +F+ ++ ++I Y M Q +E+ L+R ++ + PD
Sbjct: 30 YDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSF 89
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+CA A+ G+ IH+++ G + AL+DMYAK GK+ A ++F+ M
Sbjct: 90 TFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEM 149
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
++S ++WT +I G G A +F +M ++ + F ++ A +G + R
Sbjct: 150 IDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSAR 205
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA--- 253
+ F+ M R + I YG G L A L MP E N W ++++
Sbjct: 206 KLFDEMPERSVVSWTIMIYG-----YSSNGNLDSARSLFDAMP-EKNLFSWNAMISGYRQ 259
Query: 254 -SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
Y ++L +Q LEP ++L I A LG + G + + +R + +
Sbjct: 260 NKQPYEALKLFH-EMQSTTSLEPDEVTIVSVLPAI-ADLGALDLGGWVHRFVRRKKLDRA 317
Query: 313 P--GCSYIEVSKRVHEFV 328
G + I++ + E V
Sbjct: 318 TNVGTALIDMYAKCGEIV 335
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 232/343 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA G+++ AR +F M +++ SW+++++ Y + + +A+ L+R M+ V
Sbjct: 140 WNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACV 199
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD M++ LSAC+ +GA+ +G +H ++E G+ V L ALIDMYAK G I +++
Sbjct: 200 NPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVR 259
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +M K V+TW++MI GLA HG G +AL +FSRM ++PNE+TFI +L +C H+GL
Sbjct: 260 VFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G++YF+ M +G+ PK++ YGCM+DLLGR+G+++EA++L+R MPFE +A IW +LL
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALL 379
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A IY +VE+ E A+ L L+PH G+Y +LSNIYA W ++R+ +R +++
Sbjct: 380 GACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQR 439
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE +HEF++GD SHP +Y++L ++ +++ A
Sbjct: 440 IPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQA 482
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K ++ YAK GD+ N+ +F M K+V++W+++I G A ++A++LF RM E
Sbjct: 239 KLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSE 298
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++P+E+ + L +C LG V G ++ + +G+ V ++D+ +SG I +
Sbjct: 299 GLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEE 358
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A Q+ +M + W ++ ++
Sbjct: 359 AKQLIRDMPFEPDAVIWRALLGACRIY 385
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGRE------- 159
V L N ++ Y G++ +A +VF+ M+ + +++W TMI G A++G L RE
Sbjct: 106 VFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDD 165
Query: 160 ---------------------ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
AL+++ M A V P+ T +++LSAC +G + +G
Sbjct: 166 RDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEV 225
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++S G+E ++ +ID+ + G ++ + ++ MP + + W S++
Sbjct: 226 HQFVESN-GVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK-DVLTWSSMI 276
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 224/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ G+ K D+ AR +F+ M +N +SWT +I GY Q + P + LF+ M+ E
Sbjct: 423 WTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGK 482
Query: 72 K-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P I ++A LS CA +GA +LG +H Y+ + L+ V +NNAL+DMYAKSG + AL
Sbjct: 483 DWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLAL 542
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + V +WTTMI+GLALHG G AL+ FS M ++ PNE+T +++LSAC H G
Sbjct: 543 KIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAG 602
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR F M +GI+PKI+ YGCM+DLLGRAG L+EA++L+ MP + ++ IW SL
Sbjct: 603 LVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSL 662
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++G++ L E A + +I+LEP + G Y +L NIY RW ++ K RK MRD VK
Sbjct: 663 LSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVK 722
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS++EV+ VHEF+A D H +Y +L I QMK
Sbjct: 723 KKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 764
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 36/273 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y ++G +A+ +F + +++SWT LI+ Y QP +A ++F + ++PD +
Sbjct: 298 YTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCV 357
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ A+SAC + G +H + ++ L + + NALIDMY++SG I A VF+ M+
Sbjct: 358 VGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEI 417
Query: 139 KSV-------------------------------ITWTTMIAGLALHGLGREALDMFSRM 167
K V ++WT MI G + L++F M
Sbjct: 418 KDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM 477
Query: 168 ERARVK--PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
RA K P IT +A+LS C +G +LG + ++ ++ + ++D+ ++
Sbjct: 478 -RAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYV-NKTNLDLDVTVNNALMDMYAKS 535
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G L A K+ + MP + + W ++++ ++G
Sbjct: 536 GALVLALKIFQEMP-KRDVFSWTTMISGLALHG 567
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFSRMERARVKP 174
L++ Y + G A +VF +++N +++WT +I+ L LH +A +FS + + ++P
Sbjct: 294 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLIS-LYLHTSQPCKAFSIFSHLFHSGLRP 352
Query: 175 NEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
+ + +SAC H + GR + + G +P + +ID+ R+G ++ A
Sbjct: 353 DSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGN--ALIDMYSRSGAIEVACS 410
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + M + + + W SLL D+E
Sbjct: 411 VFKTMEIK-DVSSWTSLLNGFIKCNDIE 437
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 231/344 (67%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ GY ++GD AR LF+ M +++V+SW T+I+GY+ +A+ +FR M+ +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++P+ + +++ L A ++LG++ELGEW+H Y E G+ L +ALIDMY+K G I KA+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE + ++VITW+ MI G A+HG +A+D F +M +A V+P+++ +I +L+AC H G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GRRYF+ M S G+EP+IE YGCM+DLLGR+G L EAE+ + MP + + IW +L
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + G+VE+G+ L+ + PH+SG Y LSN+YA G W+E ++R M++ ++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K PGCS I++ +HEFV D SHP + +L +I+ +++ A
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 50/283 (17%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--AITLFRRMQV-ENVKPDEIAMLA 80
DL+ A +F M ++N SW T+I G+++ D+ AITLF M E V+P+ +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI-- 109
L ACA+ G ++ G+ IH +YG N I
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 110 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
+ L N +ID Y + G A +F+ M+ +SV++W TMI+G +L+G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
++A+++F M++ ++PN +T +++L A +G +ELG + ++ GI
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +++A + R+P E N W +++ I+G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 230/341 (67%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKV-GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
NTMV Y+ G +N+AR +F+ M + + ++W+ +I GYA++ + EA+ LFR MQ+ V
Sbjct: 171 NTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEV 230
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDEI M++ LSAC LGA+ELG+WI YIE++ ++ V ++NALIDM+AK G I KAL+
Sbjct: 231 CPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALK 290
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K++++WT++I G+A+HG G+EA +F M + V P+++ FI +LSAC H GL
Sbjct: 291 LFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGL 350
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR YF M +Y + PKIE YGCM+D+ R G ++EA + +R MP E N I +L+
Sbjct: 351 VERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLV 410
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +G+ +LGE + L+K EP + NY +LSNIYA W + KIR+VM G+KK
Sbjct: 411 SACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKK 470
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG + IE+ ++EFVAGD SH +Y+++ ++ +MK
Sbjct: 471 VPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMK 511
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 43 WTTLIAGYAQMDQP-NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
+ TLI YAQ ++A+ L+ M + + P++ L ACA L + LG+ +H +
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158
Query: 102 EQYGLNTIVPLNNALIDMYA-KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
++G + + + N ++ MY+ +G I A +VF+ M +TW+ MI G A G EA
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F M+ A V P+EIT +++LSAC +G +ELG ++ R+ I +E +ID
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELG-KWIEAYIERHEIHKPVEVSNALID 277
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ + G + +A KL R M E W S++ ++G + C + +
Sbjct: 278 MFAKCGDISKALKLFRAMN-EKTIVSWTSVIVGMAMHGRGQEATCLFEEM 326
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 222/336 (66%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ YAK GD+ +A LF+ + K++++WT ++ GYAQ +P EA+ F++MQ +
Sbjct: 212 WTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
+ DE+ + +SACAQLGAV+ WI + E+ +G + V + +ALIDMY+K G +A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE MK ++V ++++MI G A+HG AL +F M + ++PN++TFI ILSAC H
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR+ F M+ +G+ P + Y CM+DLLGRAG L+EA L++ MP E N +WG+
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G+ ++ + A L KLEP+ GNY +LSNIYA GRW E K+RKV+R+ G
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 310 KKMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQIL 344
KK PGCS+ E + +H+F AGDT+HP + Q L
Sbjct: 512 KKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQAL 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
+F + N WT +I GYA +E+ + RM+ + V P A AC
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 91 VELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT------ 143
++LG+ +H I G + + + N++ID+Y K G +G A +VF+ M + V++
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 144 -------------------------WTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
WT M+ G A +G +EAL+ F +M+ ++ +E+T
Sbjct: 218 AYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
++SAC +G V+ +I +S +G + +ID+ + G EA K+
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337
Query: 238 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 285
M E N + S++ ++G ++K E P+ ILS
Sbjct: 338 MK-ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSG-KIGK-ALQVFENMKNKSVITWTTMIAGLALH 154
+H +I + GL+ + LI M K +G L VF + + WT MI G AL
Sbjct: 61 VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
GL E+ + ++RM R V P TF A+ AC ++LG++ G +
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
MIDL + G+L A K+ M E + W L+ A YGD+E L
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYAKYGDMESASGLFD---DLP 236
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ + + YA GR E+ + + M+D+G++
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 221/348 (63%), Gaps = 7/348 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-- 69
+ M+ YAK G L AR LFE M K+V+ W +I GYAQ PNEA+ FR+M +
Sbjct: 186 YTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMG 245
Query: 70 -----NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
V+P+EI ++A LS+C Q+GA+E G+W+H+Y+E G+ V + AL+DMY K G
Sbjct: 246 GNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCG 305
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ A +VF+ M+ K V+ W +MI G +HG EAL +F M VKP++ITF+A+L+
Sbjct: 306 SLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLT 365
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV G F+ MK YG+EPK+E YGCM++LLGRAG +QEA L+R M E +
Sbjct: 366 ACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDP 425
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
+WG+LL A I+ +V LGE + L+ +SG Y +LSN+YA W K+R +M
Sbjct: 426 VLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMM 485
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ GV+K PGCS IEV RVHEFVAGD HP +Y +L K+NG +K
Sbjct: 486 KGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLK 533
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 44/278 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA +G L+++ LF NV WT +I +A D + A++ + +M ++P+ +
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L AC + +H++ ++GL++ + ++ L+D YA+ G + A ++F+ M
Sbjct: 125 SSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 139 KS-------------------------------VITWTTMIAGLALHGLGREALDMFSR- 166
+S V+ W MI G A HG EAL F +
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 167 ------MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+V+PNEIT +A+LS+C VG +E G+ + +++ GI+ + ++D
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENN-GIKVNVRVGTALVD 299
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G L++A K+ M + + W S++ I+G
Sbjct: 300 MYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIHG 336
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + + GL+ LN L YA G + ++ +F N +V WT +I A L
Sbjct: 42 IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
AL +S+M ++PN T ++L AC R + ++G+ +
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKAC-----TLHPARAVHSHAIKFGLSSHLYVST 156
Query: 217 CMIDLLGRAGYLQEAEKLLRRMP 239
++D R G + A+KL MP
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMP 179
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 221/321 (68%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++ +A++G + A ALF M +K +++WT +++GY + A+ FR MQ E
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLGA+ELG WI+ Y +++G+ T + NAL++MYAK G I +ALQ
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F+ M +K VI+W+T+I GLA HG EA+ +F+ ME+ +V+PN ITF+ +LSAC + G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G +F+ M YG+EP +E YGC++DLLGR+G ++ A L+R MP A+A +WGSL
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +GDV+ A + L++LEP + GN +L+N+YA RW++ RK +R ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS IEV V EFVAG+
Sbjct: 488 KTPGCSLIEVGNVVREFVAGE 508
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------DEIA 77
+ +A +F + + N+ +I YAQ Q +A+ ++ RM P D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
L AC A+ELG+ +H ++ + G ++ + N+LI+MY ++G + A +VF+ M+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 138 -------------------------------NKSVITWTTMIAGLALHGLGREALDMFSR 166
+K+++TWT M++G G A+D F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M+ +P++++ +A+L AC +G +ELGR + K R+G+ ++++ + G
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCK-RHGMLTSTHICNALMEMYAKCG 300
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +A +L M + + W +++ +G
Sbjct: 301 CIDQALQLFDGMA-DKDVISWSTVIGGLAAHG 331
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 187
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 188 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 247 WGSLLAA 253
W L++A
Sbjct: 188 WNMLISA 194
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 220/340 (64%), Gaps = 4/340 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K G++ AR LF+ M +K+VI W T+I GY + EA+ LF M ENV
Sbjct: 298 NALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT 357
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKIGK 128
P+++ LA L ACA LGA++LG+W+H YI++ G V L ++I MYAK G +
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A QVF +M ++S+ +W MI+GLA++G AL +F M +P++ITF+ +LSAC
Sbjct: 418 AEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQ 477
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G VELG RYF+ M YGI PK++ YGCMIDLL R+G EA+ L+ M E + AIWG
Sbjct: 478 AGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWG 537
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLL A I+G VE GE + L +LEP NSG Y +LSNIYA GRW++ KIR + D G
Sbjct: 538 SLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKG 597
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
+KK+PGC+ IE+ VHEF+ GD HP + ++++L +++
Sbjct: 598 MKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 148/253 (58%), Gaps = 4/253 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY G +++AR LF+ + K+V+SW +IAGY Q + EA+ F RMQ +V
Sbjct: 196 FTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADV 255
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P++ M++ LSAC L ++ELG+WI +++ G + L NAL+DMY+K G+IG A +
Sbjct: 256 SPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARK 315
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M++K VI W TMI G L EAL +F M R V PN++TF+A+L AC +G
Sbjct: 316 LFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGA 375
Query: 192 VELGR---RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
++LG+ Y + G + + +I + + G ++ AE++ R M + A+ W
Sbjct: 376 LDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WN 434
Query: 249 SLLAASNIYGDVE 261
++++ + G E
Sbjct: 435 AMISGLAMNGHAE 447
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 24 DLNNARALFELMTEK--NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 81
DL+ A +LF + + N+ W TLI ++ P ++ LF +M + P+ +
Sbjct: 74 DLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSL 133
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------------- 122
+CA+ A + +H + + L+ ++ +LI MY++
Sbjct: 134 FKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDA 193
Query: 123 ------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 170
G + A ++F+ + K V++W MIAG G EAL F+RM+ A
Sbjct: 194 VSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA 253
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
V PN+ T +++LSAC H+ +ELG+ + ++ R G ++ ++D+ + G +
Sbjct: 254 DVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDR-GFGKNLQLVNALVDMYSKCGEIGT 312
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
A KL M + + +W +++ Y + L E AL
Sbjct: 313 ARKLFDGME-DKDVILWNTMIGG---YCHLSLYEEAL 345
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +++ YAK G + A +F M +++ SW +I+G A A+ LF M E
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKI 126
+PD+I + LSAC Q G VELG H Y + YG++ + +ID+ A+SGK
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELG---HRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 127 GKALQVFENMK-NKSVITWTTMIAGLALHG 155
+A + NM+ W +++ +HG
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 240/360 (66%), Gaps = 4/360 (1%)
Query: 13 NTMVAGYAKV----GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
NT+V Y G + AR +F+ M + + +SW+ +I GY ++ + ++AI LFR MQ+
Sbjct: 49 NTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQI 108
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ V PDEI M++ LSAC LGA+ELG+W+ +Y+E+ + V L+NALIDM+AK G + K
Sbjct: 109 KGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDK 168
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +F +M+ +++++WT++I GLA+HG G EA+ +F M R+ V P+++ FI +LSAC H
Sbjct: 169 ATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSH 228
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLV+ G+RYF+ M+ + I PKIE YGCM+D+L RAG ++EA K ++ MP + N +W
Sbjct: 229 SGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWR 288
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L+ A +G+++LGE + LI+ EP + NY +LSNIYA + W + +IR+ M G
Sbjct: 289 TLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKG 348
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+KK+PG + IE+ ++EFVAGD SH +Y+++ ++ +MK A ++ +L+ D
Sbjct: 349 MKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDID 408
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY----AKSGKIGK 128
P++ L ACA +G + LG+ +H + ++G V + N L+ MY G I
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +VF+ M ++W+ MI G G +A+++F M+ V P+EIT +++LSAC
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G +ELG ++ + ++ +E +ID+ + G + +A L R M E N W
Sbjct: 128 LGALELG-KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-ERNIVSWT 185
Query: 249 SLLAASNIYG 258
S++ ++G
Sbjct: 186 SVIGGLAMHG 195
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 232/333 (69%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++G+ ++G + ARA+FE + +K + SWT +++GYA++ A+ FRRMQ+ ++
Sbjct: 160 WNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDI 219
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ DEI++++ L ACAQLGA+ELG+WIH Y ++ G + + NALI++YAK G + + +
Sbjct: 220 ELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRR 279
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + VI+W+TMI GLA HG REA+++F M++A+V+PN ITF+ +LSAC H GL
Sbjct: 280 LFHKMNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGL 339
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G YF M+ IEP +E YGC+++LLG +G L +A +L+++MP + ++ IWG L
Sbjct: 340 LNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLS 399
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +G++E+ A++HL++LEP ++GNY LSN+YA LG+W+ ++RK+M + K
Sbjct: 400 SSCRSHGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNK 459
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV V E+ +GD S P +Y++L
Sbjct: 460 TPGCSSIEVDNMVQEYASGDDSKPFSKAIYRVL 492
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 38/272 (13%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVK-PDEIA 77
G+ A LF+ + + N + +I Y AIT+ ++M EN PD+
Sbjct: 34 GETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFT 93
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-------------- 123
+ CA L LG+ +H + ++G + + N+L++MY K
Sbjct: 94 FPFVVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMT 153
Query: 124 -----------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
G++ +A +FE +++K++ +WT +++G A G AL+ F R
Sbjct: 154 ERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRR 213
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M+ ++ +EI+ +++L AC +G +ELG ++ +I + G I +I++ + G
Sbjct: 214 MQMVDIELDEISLVSVLPACAQLGALELG-KWIHIYADKAGFLRDICVCNALIEVYAKRG 272
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ E +L +M E + W +++ +G
Sbjct: 273 SMDEGRRLFHKMN-ERDVISWSTMIVGLANHG 303
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 232/342 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV A+ GD+ AR LFE M EK+ I+W +I+GYAQ+ + EA+ LF MQ+E VK
Sbjct: 186 TAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVK 245
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ ++M++ LSAC QLGA++ G W H+YIE+ + V L L+D+YAK G + KA++V
Sbjct: 246 VNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEV 305
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M+ K+V TW++ + GLA++G G + L +FS M++ V PN +TF+++L C VG V
Sbjct: 306 FWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 365
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+++F+ M++ +GIEP+++ YGC++DL RAG L++A ++++MP +A+AA+W SLL
Sbjct: 366 DEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLH 425
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS +Y ++ELG A + +++LE N G Y +LSNIYA W+ +R+ M+ GV+K
Sbjct: 426 ASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQ 485
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS +EV+ VHEF GD SHP ++ + + I+ +++ A
Sbjct: 486 PGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLA 527
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 205/343 (59%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y K GDL ++ LFE ++ KN++SW T+I + Q E + F +
Sbjct: 673 KVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWV 732
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+KPD+ LA L C +G V L + IH I G N + AL+D+YAK G++ +
Sbjct: 733 GLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDS 792
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF + + + WT M+A A HG GR+A+ F M + P+ +TF +L+AC H
Sbjct: 793 STVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHS 852
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR YF M RY IEP+++ Y CM+DL+GR+G LQ+A L++ MP E ++ +WG+
Sbjct: 853 GLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGA 912
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +Y D +LG A + L +LEP + NY +LSNIY+ G W ++ +IR +M+ G+
Sbjct: 913 LLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGL 972
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ G SYIE ++H+FV GD SHP+ +++ + L +I +MK
Sbjct: 973 VRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 1015
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 61 TLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
L R M+ E +P+E+ L+ +SAC G E G IH + + G+ V + NAL+++
Sbjct: 622 VLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNL 681
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y K+G + + ++FE++ K++++W TMI +GL E L F+ +KP++ TF
Sbjct: 682 YGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATF 741
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+A+L C +G+V L + ++ G ++DL + G L+++ + +
Sbjct: 742 LAVLRVCEDIGVVRLSQGIHGLIMF-CGFNANTCITTALLDLYAKLGRLEDSSTVFLEIT 800
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHL 270
++ W ++LAA +G G A++H
Sbjct: 801 -SPDSMAWTAMLAAYATHG---YGRDAIKHF 827
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 38/317 (11%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPDEIAMLAAL 82
L+ A + + + + + ++I + + P ++ + R+ +KPD + +
Sbjct: 64 LDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLV 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY---------------------- 120
AC LG E G +H + G + + LI +Y
Sbjct: 124 QACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFV 183
Query: 121 ---------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
A+ G + A ++FE M K I W MI+G A G REAL++F M+
Sbjct: 184 CRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEG 243
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
VK N ++ I++LSAC +G ++ GR + ++ R I+ + ++DL + G + +A
Sbjct: 244 VKVNGVSMISVLSACTQLGALDQGRWAHSYIE-RNKIKITVRLGTTLVDLYAKCGDMDKA 302
Query: 232 EKLLRRMPFEANAAIWGSLL--AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 289
++ M E N W S L A N +G+ L +L + P+ ++L +
Sbjct: 303 MEVFWGME-EKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGC-S 360
Query: 290 ILGRWNESGKIRKVMRD 306
++G +E K MR+
Sbjct: 361 VVGFVDEGQKHFDSMRN 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
++ + T+V YAK GD++ A +F M EKNV +W++ + G A + + LF
Sbjct: 280 KITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSL 339
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSG 124
M+ + V P+ + ++ L C+ +G V+ G+ + + ++G+ + L+D+YA++G
Sbjct: 340 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAG 399
Query: 125 KIGKALQVFENMKNKS-VITWTTMI 148
++ A+ + + M K+ W++++
Sbjct: 400 RLEDAVSIIQQMPMKAHAAVWSSLL 424
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 233/358 (65%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ G ++GD+ +A+ LF+ M ++V+SW +I+GYAQ EAI LF+ MQ N
Sbjct: 206 LWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSN 265
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+ + +++ L A A++GA+ELG+WIH Y + + L +AL+DMY+K G I KAL
Sbjct: 266 IDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKAL 325
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
QVFE + ++ ITW+ +I A+HG +A+ F M +A V PN++ +I ILSAC H G
Sbjct: 326 QVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAG 385
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR +F+ M G++P+IE YGCM+DLLGRAG+L+EAE+L+R MP E + IW +L
Sbjct: 386 LVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKAL 445
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ ++++GE + L++L PH+SG+Y LSN+YA LG W ++R M+ M ++
Sbjct: 446 LGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIR 505
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K PGCS+IE+ +HEF+ D SH + +L +++ +++ + N L +D
Sbjct: 506 KDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTD 563
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 53/289 (18%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN---EAITLFRRMQVE-NVKPDEIAML 79
D++ ARA+F M E N W T++ A+ + + EA+ LF M + VKP+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI- 109
+ L ACA+ + G+ IH I ++G N +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 110 -----------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
V L N +ID + G I A +F+ M +SV++W MI+G A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G EA+++F M+ + + PN +T +++L A +G +ELG ++ ++ + +E
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKVEIDD 305
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++D+ + G + +A ++ +P + NA W +++ A ++G E
Sbjct: 306 VLGSALVDMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 221/321 (68%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++ +A++G + A ALF M +K +++WT +++GY + A+ FR MQ E
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLGA+ELG WI+ Y +++G+ T + NAL++MYAK G I +ALQ
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F+ M +K VI+W+T+I GLA HG EA+ +F+ ME+ +V+PN ITF+ +LSAC + G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G +F+ M YG+EP +E YGC++DLLGR+G ++ A L+R MP A+A +WGSL
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +GDV+ A + L++LEP + GN +L+N+YA RW++ RK +R ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS IEV V EFVAG+
Sbjct: 488 KTPGCSLIEVGNVVREFVAGE 508
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------DEIA 77
+ +A +F + + N+ +I YAQ Q +A+ ++ RM P D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
L AC A+ELG+ +H ++ + G ++ + N+LI+MY ++G + A +VF+ M+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 138 -------------------------------NKSVITWTTMIAGLALHGLGREALDMFSR 166
+K+++TWT M++G G A+D F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M+ +P++++ +A+L AC +G +ELGR + K R+G+ ++++ + G
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCK-RHGMLTSTHICNALMEMYAKCG 300
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +A +L M + + W +++ +G
Sbjct: 301 CIDQALQLFDGMA-DKDVISWSTVIGGLAAHG 331
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 187
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 188 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 247 WGSLLAA 253
W L++A
Sbjct: 188 WNMLISA 194
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/363 (43%), Positives = 238/363 (65%), Gaps = 9/363 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+TM+ Y +A +FELM EK++++W ++I G+A +PNEA+TL++RM E V+
Sbjct: 50 DTMITAY-----FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVE 104
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ LSACA+L + LG H Y+ + GLN + NNAL+D+YAK G I +A ++
Sbjct: 105 PDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKI 164
Query: 133 FENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ M ++V++WT++I GLA++G G+EAL+ F MER + P+EITF+ +L AC H G+
Sbjct: 165 FDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGI 224
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G YF MK +Y I P+IE YGCM+DLLGRAG L+EA ++ MP + NA IW +LL
Sbjct: 225 VNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLL 284
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G + LG A L++LEP +SG+Y +LSN+YA RW++ ++R+ M GV+K
Sbjct: 285 GACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRK 344
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA---EHLQNEFSGVLESD 368
PG S +E+ VHEFV GD +HP + +Y++L ++ ++K A H N + + E +
Sbjct: 345 TPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEE 404
Query: 369 VAS 371
S
Sbjct: 405 KES 407
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 234/358 (65%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ G ++GD+ +A+ LF+ M +++V+SW +I+GYAQ EAI LF+ MQ N
Sbjct: 206 LWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSN 265
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+ + +++ L A A++GA+ELG+WIH Y + + L +AL+DMY+K G I +AL
Sbjct: 266 IDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEAL 325
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
QVFE + ++ ITW+ +I A+HG +A+ F M +A V PN++ +I ILSAC H G
Sbjct: 326 QVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAG 385
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR +F+ M G++P+IE YGCM+DLLGRAG+L+EAE+L+R MP E + IW +L
Sbjct: 386 LVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKAL 445
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ ++++GE + L++L PH+SG+Y LSN+YA LG W ++R M+ M ++
Sbjct: 446 LGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIR 505
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K PGCS+IE+ +HEF+ D SH + +L +++ +++ + N L +D
Sbjct: 506 KDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTD 563
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 53/289 (18%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN---EAITLFRRMQVE-NVKPDEIAML 79
D++ ARA+F M E N W T++ A+ + + EA+ LF M + VKP+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI- 109
+ L ACA+ + G+ IH I ++G N +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 110 -----------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
V L N +ID + G I A +F+ M +SV++W MI+G A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G EA+++F M+ + + PN +T +++L A +G +ELG ++ ++ + IE
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKIEIDD 305
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++D+ + G + EA ++ +P + NA W +++ A ++G E
Sbjct: 306 VLGSALVDMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 232/357 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+AG + L ARALF+ ++V+ WT +++ YAQ + ++A LF +M+ V
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P ++ +++ LS CA GA++LG+W+H+YI++ + LN AL+DMYAK G I A +
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 415
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F ++ + W +I G A+HG G EALD+F+ MER VKPN+ITFI +L AC H GL
Sbjct: 416 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 475
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G++ F M +G+ P+IE YGCM+DLLGRAG L EA ++++ MP + N +WG+L+
Sbjct: 476 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 535
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++ + +LGE A L+++EP N G ++SNIYA RW+++ +RK M+ +G+KK
Sbjct: 536 AACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKK 595
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S IEV+ VHEF+ GD SHP R+ ++L ++ ++ A ++ + + +L D
Sbjct: 596 EPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 652
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 40/296 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + + AR +F+ M E++V+SW+T+I ++ + + A+ L R M V+
Sbjct: 163 NALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 222
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI--VPLNNALIDMYAKSGKIGKAL 130
P E+AM++ ++ A + +G+ +H Y+ + N VP AL+DMYAK G +G A
Sbjct: 223 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 282
Query: 131 QVFENMKNKSVITWTTMIAGL-------------------------------ALHGLGRE 159
Q+F + K+V++WT MIAG A +
Sbjct: 283 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 342
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
A ++F +M + V+P ++T +++LS C G ++LG+ + I K R ++ + +
Sbjct: 343 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT--AL 400
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+D+ + G + A +L + +W +++ ++G GE AL ++E
Sbjct: 401 VDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHG---YGEEALDIFAEME 452
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W +I Y + +QP A+ ++ +++ + + D + L AC Q+ +LG+ IH ++
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ GL+ V + NAL+ MY + + A VF+ M + V++W+TMI L+ + AL+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 221
+ M +V+P+E+ +++++ + +G+ + ++++ + ++D+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+L A +L + + W +++A
Sbjct: 272 YAKCGHLGLARQLFNGLT-QKTVVSWTAMIA 301
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 229/354 (64%), Gaps = 8/354 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YA +G L++AR LF+ + K+ I W +I GY Q +PNEA+ LFRRM + +
Sbjct: 189 TAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAE 248
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKIGK 128
PDE+ ++ LSA AQLG VE G+W+H+Y++ + V LN AL+DMY K G +
Sbjct: 249 PDEVTVVLVLSAVAQLGTVESGKWLHSYVKN---SRCVQLNVRVATALVDMYCKCGSLED 305
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A+ VF + NK ++ W MI G A+HG R+AL+MF ++ + P +ITFI +L+AC H
Sbjct: 306 AVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSH 365
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE GR +F M+ YGI+PKIE YGCM+DLLGRAG ++EA L++ + +A +W
Sbjct: 366 SGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWV 425
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLLAA ++ ++ LG+ L+ NSG Y +LSNIYA +G+W E ++R +M+ G
Sbjct: 426 SLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASG 485
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 361
++K PGCS IE+ ++V+EFVAGD SHP D +Y +L K+N +K H+ Q E
Sbjct: 486 IQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTEL 539
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 222/336 (66%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ YAK GD+ +A LF+ + K++++WT ++ GYAQ +P EA+ F++MQ +
Sbjct: 212 WTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
+ DE+ + +SACAQLGAV+ WI + E+ +G + V + +ALIDMY+K G +A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE MK ++V ++++MI G A+HG AL +F M + ++PN++TFI ILSAC H
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR+ F M+ +G+ P + Y CM+DLLGRAG L+EA L++ MP E N +WG+
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G+ ++ + A L KLEP+ GNY +LSNIYA GRW E K+RKV+R+ G
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 310 KKMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQIL 344
KK PGCS+ E + +H+F AGDT+HP + Q L
Sbjct: 512 KKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQAL 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
+F + N WT +I GYA +E+ + RM+ + V P A AC
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 91 VELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT------ 143
++LG+ +H I G + + + N++ID+Y K G +G A +VF+ M + V++
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 144 -------------------------WTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
WT M+ G A +G +EAL+ F +M+ ++ +E+T
Sbjct: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
++SAC +G V+ +I +S +G + +ID+ + G EA K+
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337
Query: 238 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 285
M E N + S++ ++G ++K E P+ ILS
Sbjct: 338 MK-ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSG-KIGK-ALQVFENMKNKSVITWTTMIAGLALH 154
+H +I + GL+ + LI M K +G L VF + + WT MI G AL
Sbjct: 61 VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
GL E+ + ++RM R V P TF A+ AC ++LG++ G +
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE-----LGECALQH 269
MIDL + G+L A K+ M E + W L+ A YGD+E + L+
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYAKYGDMESASGLFDDLPLKD 239
Query: 270 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
++ +G YA GR E+ + + M+D+G++
Sbjct: 240 MVAWTAMVTG--------YAQNGRPKEALEYFQKMQDVGME 272
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 150/344 (43%), Positives = 233/344 (67%), Gaps = 1/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNT+++GY G ++ AR +F+ M EKN++SW+T+I+GYA+ ++ +AI LFR+MQ E
Sbjct: 196 WNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGG 255
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+++ +++ LSACA LGA++LG+WIH +I + + + L NAL DMYAK G + +A
Sbjct: 256 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 315
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M + VI+W+ +I GLA++G EA + F+ M ++PN+I+F+ +L+AC H G
Sbjct: 316 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 375
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G YF++M YGI PKIE YGC++DLL RAG L +AE L+ MP + N +WG+L
Sbjct: 376 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 435
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L IY D E GE + +++L+ ++SG+ L+N+YA +GR +++ R MRD
Sbjct: 436 LGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSM 495
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K PGCS+IE++ V+EF GD+SHP R+Y ++ ++ +MK A
Sbjct: 496 KTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVA 539
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 37/271 (13%)
Query: 23 GDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--ENVKPDEIAML 79
G+L ++ +F ++ N+ ++ L+ ++Q + + I+ F V PDE
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L ACA L V G+ +H ++ +YG + + + N+L+D+Y K G A ++F+ M +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 140 SVITWTTMIAGLALHGLGR-------------------------------EALDMFSRME 168
V++W T+I+G G+ +A+++F +M+
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQ 251
Query: 169 R-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ PN++T +++LSAC H+G ++LG+ ++ R IE + + D+ + G
Sbjct: 252 HEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIR-RNKIEVGLFLGNALADMYAKCGC 310
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ EA+ + M E + W ++ +YG
Sbjct: 311 VLEAKGVFHEM-HERDVISWSIIIMGLAMYG 340
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 231/342 (67%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 86
+A+ +F+ K+ ++W+ +I GYA+ A+TLFR MQV V PDEI M++ LSACA
Sbjct: 285 SAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACA 344
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
LGA+ELG+W+ +YIE+ + V L NALIDM+AK G + +A++VF MK +++++WT+
Sbjct: 345 DLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTS 404
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
MI GLA+HG G EA+ +F M V P+++ FI +LSAC H GLV+ G YFN M++ +
Sbjct: 405 MIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMF 464
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
I PKIE YGCM+D+L RAG + EA + +R MP E N IW S++ A + G+++LGE
Sbjct: 465 SIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESV 524
Query: 267 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 326
+ LI+ EP + NY +LSNIYA L RW + K+R++M G++K+PG + IE++ ++E
Sbjct: 525 AKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYE 584
Query: 327 FVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
FVAGD SH + +Y+++ ++ ++K A ++ +L+ D
Sbjct: 585 FVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDID 626
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 8/222 (3%)
Query: 43 WTTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
+ TLI +AQ A+ + M+ V P++ L ACA + +ELG +H +
Sbjct: 194 FNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASM 253
Query: 102 EQYGLNTIVPLNNALIDMY---AKSGKIG--KALQVFENMKNKSVITWTTMIAGLALHGL 156
++G + N L+ MY + G G A +VF+ K +TW+ MI G A G
Sbjct: 254 VKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGN 313
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A+ +F M+ V P+EIT +++LSAC +G +ELG ++ R I +E
Sbjct: 314 SARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELG-KWLESYIERKNIMRSVELCN 372
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G + A K+ R M + W S++ ++G
Sbjct: 373 ALIDMFAKCGDVDRAVKVFREMKVRTIVS-WTSMIVGLAMHG 413
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 228/353 (64%), Gaps = 6/353 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YAK+G L++AR LF+ M K+ I W +I GY Q +PNEA+ LFR M V
Sbjct: 200 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 259
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGKA 129
PDE+A++ ALSA AQLG E G W+H+Y++ + LN V ALIDMY K G + A
Sbjct: 260 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCKCGSLEDA 317
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VF ++ +K ++ W MI G A+HG R+AL+MFS++ + P +ITFI +L+AC H
Sbjct: 318 VSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHS 377
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G ++F M+ Y I PKIE YGCM+DLLGRAG ++EA L++ M + +W S
Sbjct: 378 GLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVS 437
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+ G+
Sbjct: 438 LLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGI 497
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 361
+K PGCS IEV ++V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 498 QKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTEL 550
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 109 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
+VP+ A++ YAK G + A ++F+ M +K I W MI G HG EAL +F M
Sbjct: 196 VVPVT-AMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWML 254
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
R+ V P+E+ I LSA +G E GR + +K+ ++ +ID+ + G L
Sbjct: 255 RSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSL 314
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++A + + + + +W +++ ++GD
Sbjct: 315 EDAVSVFNSIG-DKDIVVWNAMINGYAMHGD 344
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 228/353 (64%), Gaps = 6/353 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YAK+G L++AR LF+ M K+ I W +I GY Q +PNEA+ LFR M V
Sbjct: 199 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 258
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGKA 129
PDE+A++ ALSA AQLG E G W+H+Y++ + LN V ALIDMY K G + A
Sbjct: 259 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCKCGSLEDA 316
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VF ++ +K ++ W MI G A+HG R+AL+MFS++ + P +ITFI +L+AC H
Sbjct: 317 VSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHS 376
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G ++F M+ Y I PKIE YGCM+DLLGRAG ++EA L++ M + +W S
Sbjct: 377 GLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVS 436
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+ G+
Sbjct: 437 LLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGI 496
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 361
+K PGCS IEV ++V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 497 QKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTEL 549
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 109 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
+VP+ A++ YAK G + A ++F+ M +K I W MI G HG EAL +F M
Sbjct: 195 VVPVT-AMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWML 253
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
R+ V P+E+ I LSA +G E GR + +K+ ++ +ID+ + G L
Sbjct: 254 RSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSL 313
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++A + + + + +W +++ ++GD
Sbjct: 314 EDAVSVFNSIG-DKDIVVWNAMINGYAMHGD 343
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 227/347 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y K G++ +ARA+F+ M K+V++WT +I+ YAQ + + A LF +M+ V+
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ M++ LS CA GA+++G+W H YI++ G+ V L ALIDMYAK G I A ++
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + TW M+AG +HG G +AL +F+ ME VKPN+ITFI L AC H GLV
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ F M +G+ PK+E YGCM+DLLGRAG L EA K++ MP N AIWG++LA
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ + +GE A + L+ LEP N G ++SNIYA RWN+ +RK ++D G+KK
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IEV+ VH+F GDT+HP +++ ++L +++ ++K A +L +
Sbjct: 571 PGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPD 617
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 154/284 (54%), Gaps = 27/284 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTT----------------------LIAGY 50
N ++ Y++ G L +AR LF+ M+E++V+SW+T +IAGY
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGY 207
Query: 51 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 110
+ + E LF RM ENV P++I ML+ + +C +GAV+LG+ +H YI + G +
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267
Query: 111 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 170
L AL+DMY K G+I A +F++MKNK V+TWT MI+ A A +F +M
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
V+PNE+T +++LS C G +++G ++F+ + G+E + +ID+ + G +
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
A++L + + W ++A ++G GE AL+ ++E
Sbjct: 387 AQRLFSE-AIDRDICTWNVMMAGYGMHG---YGEKALKLFTEME 426
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 118/242 (48%), Gaps = 29/242 (11%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
P A+ + M+ +++ D + + L AC+Q+ +G+ IH + + GL + V + N
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG--LALHGLGREAL----------- 161
AL+ MY++ G + A +F+ M + V++W+TMI +G + ++
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208
Query: 162 ---------DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPK 211
+F RM V PN+IT ++++ +C VG V+LG+R + I+++ +G+
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 271
+ ++D+ G+ G ++ A + M + W ++++A Y + A Q +
Sbjct: 269 LAT--ALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA---YAQANCIDYAFQLFV 322
Query: 272 KL 273
++
Sbjct: 323 QM 324
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 220/321 (68%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++ +A++G + A ALF M +K +++WT +++GY + A+ FR MQ E
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+++++A L ACAQLG +ELG WI+ Y +++G+ T + NAL++MYAK G I +ALQ
Sbjct: 248 EPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F+ M +K VI+W+T+I GLA HG EA+ +F+ ME+ +V+PN ITF+ +LSAC + G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G +F+ M YG+EP +E YGC++DLLGR+G ++ A L+R MP A+A +WGSL
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +GDV+ A + L++LEP + GN +L+N+YA RW++ RK +R ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS IEV V EFVAG+
Sbjct: 488 KTPGCSLIEVGNVVREFVAGE 508
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------DEIA 77
+ +A +F + + N+ +I YAQ Q +A+ ++ RM P D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
L AC A+ELG+ +H ++ + G ++ + N+LI+MY ++G + A +VF+ M+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 138 -------------------------------NKSVITWTTMIAGLALHGLGREALDMFSR 166
+K+++TWT M++G G A+D F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M+ +P++++ +A+L AC +G +ELGR + K R+G+ ++++ + G
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCK-RHGMLTSTHICNALMEMYAKCG 300
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +A +L M + + W +++ +G
Sbjct: 301 CIDQALQLFDGMA-DKDVISWSTVIGGLAAHG 331
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 187
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 188 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 247 WGSLLAA 253
W L++A
Sbjct: 188 WNMLISA 194
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 232/354 (65%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K D+ NARALF+ ++V+ WT +++ YAQ + ++A LF +M+ V+P
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ +++ LS CA GA++LG+W+H+YI++ + LN AL+DMYAK G I A ++F
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++ + W +I G A+HG G EALD+F+ MER VKPN+ITFI +L AC H GLV
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ F M +G+ P+IE YGCM+DLLGRAG L EA ++++ MP + N +WG+L+AA
Sbjct: 519 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++ + +LGE A L+++EP N G ++SNIYA RW+++ +RK M+ +G+KK PG
Sbjct: 579 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPG 638
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
S IEV+ VHEF+ GD SHP R+ ++L ++ ++ A ++ + + +L D
Sbjct: 639 HSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 692
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 142/257 (55%), Gaps = 7/257 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G L AR LF +T+K V+SWT +IAG + ++ E LF RMQ EN+ P+EI M
Sbjct: 242 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM 301
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L+ + C GA++LG+ +H YI + G + + L AL+DMY K I A +F++ +N
Sbjct: 302 LSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQN 361
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V+ WT M++ A +A ++F +M + V+P ++T +++LS C G ++LG+
Sbjct: 362 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 421
Query: 199 FN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ I K R ++ + ++D+ + G + A +L + +W +++ ++
Sbjct: 422 HSYIDKERVEVDCILNT--ALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMH 478
Query: 258 GDVELGECALQHLIKLE 274
G GE AL ++E
Sbjct: 479 G---YGEEALDIFAEME 492
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 129/243 (53%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + + AR +F+ M E++V+SW+T+I ++ + + A+ L R M V+
Sbjct: 133 NALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 192
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI--VPLNNALIDMYAKSGKIGKAL 130
P E+AM++ ++ A + +G+ +H Y+ + N VP AL+DMYAK G +G A
Sbjct: 193 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 252
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
Q+F + K+V++WT MIAG E +F RM+ + PNEIT ++++ C G
Sbjct: 253 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTG 312
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++LG++ + R G + ++D+ G+ ++ A L + IW ++
Sbjct: 313 ALQLGKQLHAYIL-RNGFSVSLALATALVDMYGKCSDIRNARALFDSTQ-NRDVMIWTAM 370
Query: 251 LAA 253
L+A
Sbjct: 371 LSA 373
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L AC Q+ +LG+ IH ++ + GL+ V + NAL+ MY + + A VF+ M +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-Y 198
V++W+TMI L+ + AL++ M +V+P+E+ +++++ + +G+ +
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++++ + ++D+ + G+L A +L + + W +++A
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAG 272
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 232/342 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV A+ GD+ AR LFE M E++ I+W +I+GYAQ+ + EA+ +F MQ+E VK
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ +AM++ LSAC QLGA++ G W H+YIE+ + V L L+D+YAK G + KA++V
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M+ K+V TW++ + GLA++G G + L++FS M++ V PN +TF+++L C VG V
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+R+F+ M++ +GIEP++E YGC++DL RAG L++A ++++MP + +AA+W SLL
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS +Y ++ELG A + +++LE N G Y +LSNIYA W+ +R+ M+ GV+K
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS +EV+ VHEF GD SHP + ++ + I+ +++ A
Sbjct: 478 PGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLA 519
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 35/260 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPDEIAMLAAL 82
L+ A + + + + + ++I + + P ++ +RR+ ++KPD + +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY---------------------- 120
AC L E G +H + G + + LI +Y
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 121 ---------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
A+ G + A ++FE M + I W MI+G A G REAL++F M+
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
VK N + I++LSAC +G ++ GR + ++ R I+ + ++DL + G +++A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIE-RNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 232 EKLLRRMPFEANAAIWGSLL 251
++ M E N W S L
Sbjct: 295 MEVFWGME-EKNVYTWSSAL 313
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
++ + T+V YAK GD+ A +F M EKNV +W++ + G A + + LF
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSL 331
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSG 124
M+ + V P+ + ++ L C+ +G V+ G+ + + ++G+ + L+D+YA++G
Sbjct: 332 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAG 391
Query: 125 KIGKALQVFENMKNKS-VITWTTMI 148
++ A+ + + M K W++++
Sbjct: 392 RLEDAVSIIQQMPMKPHAAVWSSLL 416
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 208/300 (69%), Gaps = 1/300 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K GDL+ AR LFE + EK++ISW +I GY+ M+ EA+ LFR+MQ NV+
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQ 131
P+++ ++ L ACA LGA++LG+WIH YI++ L T L +LIDMYAK G I A Q
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF MK KS+ +W MI+GLA+HG AL++F +M +P++ITF+ +LSAC H GL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VELGR+ F+ M Y I PK++ YGCMIDLLGRAG EAE L++ M + + AIWGSLL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++G+VELGE A +HL +LEP N G Y +LSNIYA GRW++ +IR + D G+KK
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 154/252 (61%), Gaps = 1/252 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY G L++AR LFE + ++ +SW +IAGYAQ + EA+ F+ M+ NV
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E M+ LSACAQ G++ELG W+ ++IE +GL + + L NALIDMY+K G + KA
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K +I+W MI G + +EAL +F +M+++ V+PN++TF++IL AC ++G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG+ + ++ + +ID+ + G ++ A+++ M ++ + W +++
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS-WNAMI 439
Query: 252 AASNIYGDVELG 263
+ ++G +
Sbjct: 440 SGLAMHGHANMA 451
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 38/265 (14%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LS+L+ + G+L+ A LFE + + N W T+I G + P AI
Sbjct: 65 FALSKLIE------FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAID 118
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ RM + V+P+ L +CA++GA + G+ IH ++ + GL + ++ +LI+MYA
Sbjct: 119 FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYA 178
Query: 122 KSGKIG-------------------------------KALQVFENMKNKSVITWTTMIAG 150
++G++G A ++FE + + ++W MIAG
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG 238
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
A G EAL F M+RA V PNE T + +LSAC G +ELG + ++ +G+
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED-HGLGS 297
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLL 235
+ +ID+ + G L +A L
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLF 322
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +++ YAK G++ A+ +F M K++ SW +I+G A N A+ LFR+M+ E
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+PD+I + LSAC+ G VELG + + +E Y ++ + +ID+ ++G +A
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 130 LQVFENMKNKSV-ITWTTMIAGLALHG 155
+ +NM+ K W +++ +HG
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHG 549
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 223/340 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L AR LF + ++V++WT ++ GYAQ+ +EAI LFRRMQ + +K
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ +AL++C+ ++ G+ IH + G + V L +AL+ MYAK G + A V
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++V+ WT MI G A HG REAL+ F +M++ +KP+++TF ++LSAC HVGLV
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR++F M YGI+P +E Y C +DLLGRAG+L+EAE ++ MPF+ ++WG+LL+
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ DVE GE A ++++KL+P + G Y LSNIYA GR+ ++ K+R+VM V K
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV +VH F D SHP+ +Y L K+ Q+K
Sbjct: 637 PGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIK 676
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 168/309 (54%), Gaps = 18/309 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK GD++ A+ +F+ + EKNV++WT LIAGYAQ Q + A+ L +MQ V
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I + L C A+E G+ +H YI Q G + + NALI MY K G + +A ++
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKL 355
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ ++ V+TWT M+ G A G EA+D+F RM++ +KP+++TF + L++C +
Sbjct: 356 FGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFL 415
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G+ + ++ + Y ++ ++ ++ + + G + +A + +M E N W ++
Sbjct: 416 QEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAM- 471
Query: 252 AASNIYGDVELGEC--ALQHLIKL-----EPHNSGNYAILSNIYAILGRWNESGK-IRKV 303
I G + G C AL++ ++ +P ++LS + G E K R +
Sbjct: 472 ----ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHV-GLVEEGRKHFRSM 526
Query: 304 MRDMGVKKM 312
D G+K M
Sbjct: 527 YLDYGIKPM 535
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ YAK G L +AR +F+ + ++N++SWT +I + +Q EA + M++ K
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ++ L+A +++G+ +H I + GL + +L+ MYAK G I KA +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K+V+TWT +IAG A G AL++ +M++A V PN+IT+ +IL C +
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ I++S YG E I +I + + G L+EA KL +P + W +++
Sbjct: 315 EHGKKVHRYIIQSGYGRE--IWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMV 371
Query: 252 AA 253
Sbjct: 372 TG 373
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 116/219 (52%), Gaps = 7/219 (3%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
EA+ + M ++ + L CA+L ++E G +H I + G+ L N L
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 137
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
+ MYAK G + A +VF+ ++++++++WT MI EA + M+ A KP++
Sbjct: 138 LSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDK 197
Query: 177 ITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF+++L+A + L+++G++ + I K+ +EP++ ++ + + G + +A+ +
Sbjct: 198 VTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGT--SLVGMYAKCGDISKAQVIF 255
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
++P E N W L+A G V++ AL+ L K++
Sbjct: 256 DKLP-EKNVVTWTLLIAGYAQQGQVDV---ALELLEKMQ 290
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 224/350 (64%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G AR LF M EKN+ W +I G+ + EA++LF MQ+ VK D++ M
Sbjct: 283 YCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 342
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L AC LGA+ELG+W+H YIE+ + V L AL+DMYAK G I A++VF+ M
Sbjct: 343 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 402
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V+TWT +I GLA+ G G +AL++F M+ + VKP+ ITF+ +L+AC H GLV G Y
Sbjct: 403 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 462
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
FN M ++YGI+P IE YGCM+D+LGRAG + EAE L++ MP + + LL+A I+G
Sbjct: 463 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 522
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
++ + E A Q LI+L+P N G Y +LSNIY+ + W + K+R++M + +KK PGCS I
Sbjct: 523 NLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAI 582
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
EV VHEFV GD SHP +Y+ L + ++K A ++ ++ + + D
Sbjct: 583 EVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMD 632
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 144/246 (58%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y+ G L +AR +F+ M K+V+SW T+I YAQ D P+EAI LFRRM++ +VK
Sbjct: 176 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVK 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI ++ L+ACA+ +E + +H YI++ G+ L +AL+D+Y K G A +
Sbjct: 236 PNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDL 295
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K++ W MI G EAL +F+ M+ + VK +++T ++L AC H+G +
Sbjct: 296 FNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGAL 355
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELG ++ ++ + IE + ++D+ + G ++ A ++ + MP E + W +L+
Sbjct: 356 ELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALIV 413
Query: 253 ASNIYG 258
+ G
Sbjct: 414 GLAMCG 419
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F + + ++I GY + P +AI ++ M ++ + PD +
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+C G + G+ +H + + G + + N L++MY+ G + A +VF+ M NKSV+
Sbjct: 148 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W TMI A L EA+ +F RME A VKPNEIT + +L+AC +E ++ +
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
GI ++D+ + G A L +MP E N W ++
Sbjct: 265 -DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMI 311
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G + +A +F+ M EK+V++WT LI G A Q +A+ LF MQ+ VK
Sbjct: 378 TALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 437
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I + L+AC+ G V G + ++ +YG+ + ++DM ++G+I +A
Sbjct: 438 PDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAED 497
Query: 132 VFENM 136
+ +NM
Sbjct: 498 LIQNM 502
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 241/358 (67%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y +G+ A +F+ + + ++W+ +IAG+ ++ + A+ LFR MQV
Sbjct: 164 NTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMG 223
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PDEI M++ LSACA LGA+ELG+W+ +Y+E+ + V L NALIDM+AK G + KA+
Sbjct: 224 VCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAI 283
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F M ++++++WT++IAGLA+HG G +A+ +F M + P+++ FI +LSAC H G
Sbjct: 284 KLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSG 343
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR YF M+ + I PK+E YGCM+DLL R G+++EA + +++MPFE N IW ++
Sbjct: 344 LVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTI 403
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ A + G+++LGE + LIK EP + NY +LSNIYA L +W + K+R++M G+K
Sbjct: 404 ITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMK 463
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PG + IEV+ ++EFVAGD SH + +Y+++ ++ ++K A ++ +L+ D
Sbjct: 464 KVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDID 521
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 43 WTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
+ TLI Y+Q D + + +R M V P++ L CA +G++ LG+ +H +
Sbjct: 92 FNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCV 151
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIG--KALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
++G V + N LI MY G+ G A +VF++ +TW+ MIAG G
Sbjct: 152 VKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSR 211
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
A+D+F M+ V P+EIT +++LSAC +G +ELG ++ + I +E +I
Sbjct: 212 AVDLFREMQVMGVCPDEITMVSVLSACADLGALELG-KWVESYVEKKNIPKSVELCNALI 270
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
D+ + G + +A KL R+M + W S++A ++G
Sbjct: 271 DMFAKCGNVDKAIKLFRQMDSRTIVS-WTSVIAGLAMHG 308
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 224/332 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+AGY + GD +AR LF+ M E+N+++W+T+I+GYA+ + +A+ F +Q E V
Sbjct: 186 WTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGV 245
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E M+ +S+CA LGA+ +GE H Y+ + L+ + L A++DMYA+ G + KA+
Sbjct: 246 VANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVM 305
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + K V+ WT +IAGLA+HG +AL FS M + P +ITF A+L+AC H G+
Sbjct: 306 VFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGM 365
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G F MK +G+EP++E YGCM+DLLGRAG L++AEK + +MP + NA IW +LL
Sbjct: 366 VERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VE+GE + L++++P SG+Y +LSNIYA +W + +R++M+D GV+K
Sbjct: 426 GACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRK 485
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 343
PG S IE+ +VHEF GD +HP+ +++ +I
Sbjct: 486 PPGYSLIEIDGKVHEFTIGDKTHPEIEKIERI 517
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 35/255 (13%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
N+ + LI G + + P + + + + PD I + ACAQL +G H
Sbjct: 81 NLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTH 140
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
++G + N+L+ MYA G I A VF+ M V++WT MIAG G +
Sbjct: 141 GQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAK 200
Query: 159 EALDMFSRM-ER------------AR------------------VKPNEITFIAILSACC 187
A ++F RM ER AR V NE + ++S+C
Sbjct: 201 SARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCA 260
Query: 188 HVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H+G + +G + +M+++ + + ++D+ R G +++A + ++P E +
Sbjct: 261 HLGALAMGEKAHEYVMRNKLSLNLILGT--AVVDMYARCGNVEKAVMVFEQLP-EKDVLC 317
Query: 247 WGSLLAASNIYGDVE 261
W +L+A ++G E
Sbjct: 318 WTALIAGLAMHGYAE 332
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 232/360 (64%), Gaps = 4/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV+GY K GDL AR +F M E+N++SW+ ++ + + EA+ +F RM E
Sbjct: 148 WNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEF 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY---GLNTIVPLNNALIDMYAKSGKIGK 128
+PD + +++ L ACA LGAVE G W+H Y+E G + L AL+DMY K G +
Sbjct: 208 RPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMED 267
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A QVF+ + + V+ W MI GLA++G G AL++F RM + PNE TFIA+L AC H
Sbjct: 268 AWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTH 327
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V+ G+R F M+ YGI+P+ E YGC+ DLLGRAG ++EAE LL MP E +A+ WG
Sbjct: 328 TGRVDEGKRVFKSMQD-YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWG 386
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L+++ ++ D+ +GE + LI+LEP++ G Y +L N+YA+ GRW E+ IR++M D G
Sbjct: 387 ALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRG 446
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
KK G S+IE++ VHEF++GDT HP ++Y +L I +++ ++++ +++ D
Sbjct: 447 AKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMD 506
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 232/360 (64%), Gaps = 4/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV+GY K GDL AR +F M E+N++SW+ ++ + + EA+ +F RM E
Sbjct: 148 WNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEF 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY---GLNTIVPLNNALIDMYAKSGKIGK 128
+PD + +++ L ACA LGAVE G W+H Y+E G + L AL+DMY K G +
Sbjct: 208 RPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMED 267
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A QVF+ + + V+ W MI GLA++G G AL++F RM + PNE TFIA+L AC H
Sbjct: 268 AWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTH 327
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V+ G+R F M+ YGI+P+ E YGC+ DLLGRAG ++EAE LL MP E +A+ WG
Sbjct: 328 TGRVDEGKRVFKSMQD-YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWG 386
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L+++ ++ D+ +GE + LI+LEP++ G Y +L N+YA+ GRW E+ IR++M D G
Sbjct: 387 ALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRG 446
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
KK G S+IE++ VHEF++GDT HP ++Y +L I +++ ++++ +++ D
Sbjct: 447 AKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMD 506
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 232/351 (66%), Gaps = 9/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++AGY + GD++ AR +F+ M E+NV+SWTT+IAG AQ+ + +A+ LF M+ V
Sbjct: 188 WNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNT--IVPLNNALIDMYAKSGKIG 127
K D++A++AALSACA+LG ++LG WIH+YI++ + N +V LNN+LI MYA G I
Sbjct: 248 KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID 307
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV---KPNEITFIAILS 184
KA +VF M+ +S I+WT+MI G A G EAL +F M+R +P+ ITFI +L
Sbjct: 308 KAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLC 367
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H G V+ GR +F M ++GI P+IE YGCM+DLL RAG+L EA +L+ MP + N
Sbjct: 368 ACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND 427
Query: 245 AIWGSLLAASNIYGDVELGECALQHL-IKLEPHNSGNY-AILSNIYAILGRWNESGKIRK 302
A+WG+LL I+ + EL Q L ++L+P + Y +LSN+YA RW + +R+
Sbjct: 428 AVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQ 487
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
M ++GV+K G S+++++ VH+FVAGD +H +Y++L KI Q K
Sbjct: 488 KMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 538
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 38/284 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ Y G+L NA +FE + + W +I G++Q + P++ + L+ RM +P+
Sbjct: 56 LLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPN 115
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA------------- 121
E + CA+ + GE +H + G T V + +L+++YA
Sbjct: 116 EFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARR 175
Query: 122 ---------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ G + A ++F+ M ++V++WTTMIAG A G ++A
Sbjct: 176 VFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 235
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY--GIEP-KIEQYGC 217
L +F M RA VK +++ +A LSAC +G ++LG + + R G +P +
Sbjct: 236 LHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNS 295
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+I + G + +A K+ M + + W S++ G E
Sbjct: 296 LIHMYASCGVIDKAYKVFIGMQQRSTIS-WTSMITGFAKQGHAE 338
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
LL N+++ YA G ++ A +F M +++ ISWT++I G+A+ EA+ +F+ M
Sbjct: 288 LLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM 347
Query: 67 Q---VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAK 122
Q + +PD I + L AC+ G V+ G + +++G+ + ++D+ ++
Sbjct: 348 QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSR 407
Query: 123 SGKIGKALQVFENMKNK-SVITWTTMIAGLALH 154
+G + +A ++ E+M K + W ++ G +H
Sbjct: 408 AGFLDEAHRLIESMPMKPNDAVWGALLGGCRIH 440
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 66 MQVENVKPDEIAMLAAL-----SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
M VE P + L AL S ++ + IH I G + L L+ Y
Sbjct: 1 MLVEEASPANLTGLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFY 60
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
SG + A +VFE ++N S W MI G + + +++++RM A +PNE T+
Sbjct: 61 ITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYS 120
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP- 239
++ C L+ G + + + G + +++L AG K R
Sbjct: 121 FLIGGCARSRLLREGEQVHGRVVAN-GYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDE 179
Query: 240 -FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
+ N W SLLA GDV + A + ++ N ++ + A +GR ++
Sbjct: 180 IVDRNIVSWNSLLAGYVRCGDV---DGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQAL 236
Query: 299 KIRKVMRDMGVK 310
+ MR GVK
Sbjct: 237 HLFHEMRRAGVK 248
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 226/342 (66%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V GY+K+G ++ AR+LF+LM E++V+SW ++I+ Y Q + EA+ LF+ M + V
Sbjct: 226 WNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGV 285
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D I + + LSACAQ+GA+++G WIH Y+++ L V L+ AL+DMYAK G I A
Sbjct: 286 SADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFG 345
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M K++ +W M++GLA+HG G AL++F +ME V PN+ITF+A+LSAC H+G
Sbjct: 346 VFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGS 405
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G + FN M + I PK+E YGCM+D+L R G + EA++++R MP E N IWG+LL
Sbjct: 406 VEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALL 465
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-K 310
A ++G +GE + ++ KL + G Y +LSNI+A +WNE K RK+M+ MGV K
Sbjct: 466 NACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEK 525
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K+PG S IE+ VH+F A D H + + ++ ++N ++
Sbjct: 526 KIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLE 567
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 42 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
SWTT+I G+ + P +A+ + M+ V+ ++ L L A + + G +H +
Sbjct: 93 SWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKL 152
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+ G V NALI MY K G I A +F+ M N +V+TW TMI G G A
Sbjct: 153 VKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERAR 212
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M V ++ A++ +G V++ R F++M R + +G MI
Sbjct: 213 RLFGEMPERNVG----SWNAVVGGYSKLGHVDIARSLFDLMPER-----DVVSWGSMISA 263
Query: 222 LGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASNIYGDVELG 263
+ G EA +L + M A++ I S+L+A G +++G
Sbjct: 264 YVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMG 308
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 6/178 (3%)
Query: 117 IDMYAKSGK-IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
++ YA S + I A VF + +WTTMI G +AL+ + M + V+ N
Sbjct: 66 VESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELN 125
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ TF+ +L A + GR + + G + +I + + G + +A L
Sbjct: 126 KFTFLFVLKAYGLRPSYQEGRIVHGKL-VKVGFCYDVFTRNALIHMYLKCGSITDAHLLF 184
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 293
MP N W +++ GD E A + ++ N G++ + Y+ LG
Sbjct: 185 DEMP-NHNVVTWNTMITGCFGCGDTER---ARRLFGEMPERNVGSWNAVVGGYSKLGH 238
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 224/338 (66%), Gaps = 2/338 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G+ + AR LF+ + EK+VISW T+I GY+ + EA+ LF M NVK
Sbjct: 302 NALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVK 361
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 131
P+++ L L ACA LGA++LG+W+H YI++ N+ L +LIDMYAK G I A +
Sbjct: 362 PNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAER 421
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VF +M ++++ +W M++G A+HG AL +FS M + +P++ITF+ +LSAC G
Sbjct: 422 VFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAG 481
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+LG +YF M YGI PK++ YGCMIDLL RA +EAE L++ M E + AIWGSL
Sbjct: 482 LVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSL 541
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +G VE GE + L +LEP N+G + +LSNIYA GRW++ +IR + D G+K
Sbjct: 542 LSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMK 601
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
K+PGC+ IE+ VHEF+ GD HP+ + +Y++L +++
Sbjct: 602 KVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVD 639
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 1/250 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY G L++AR LF+ + K+V+SW +I+GY Q + EAI F MQ NV
Sbjct: 200 FTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P++ M+ LSAC + ELG+WI +++ G + + L NALIDMY K G+ A +
Sbjct: 260 LPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARE 319
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ ++ K VI+W TMI G + L EAL +F M R+ VKPN++TF+ IL AC +G
Sbjct: 320 LFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGA 379
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG+ + + +ID+ + G ++ AE++ R M N A W ++L
Sbjct: 380 LDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM-HSRNLASWNAML 438
Query: 252 AASNIYGDVE 261
+ ++G E
Sbjct: 439 SGFAMHGHAE 448
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFE---LMTEKNVISWTTLIAGYAQMDQPN 57
+F S+L++ + GDL+ A +LFE + NV W +LI GY+ P
Sbjct: 60 VFVQSKLIH------FCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPL 113
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
++ LF RM V+P+ +C + A G+ +H + + L+ ++ ++I
Sbjct: 114 SSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVI 173
Query: 118 DMYAKSGK-------------------------------IGKALQVFENMKNKSVITWTT 146
MYA G+ + A ++F+ + K V++W
Sbjct: 174 HMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNA 233
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
MI+G G EA+ F M+ A V PN+ T + +LSAC H ELG+ + ++
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDN- 292
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G ++ +ID+ + G A +L + E + W +++
Sbjct: 293 GFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWNTMIGG 338
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYA--KSGKIGKALQVFENMKNK---SVITWTTMIAGL 151
IH+ I + GLN V + + LI A SG + AL +FE + +V W ++I G
Sbjct: 47 IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGY 106
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+L +L +FSRM V+PN TF + +C G++
Sbjct: 107 SLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQ 152
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 212/318 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
TMV GYAK G + A ++F M K+V+SW+ +IAGYA+ +P EA+ LF MQ VK
Sbjct: 80 TTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVK 139
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDEI ML+ +SACA +GA+E IH+++E + + I+P+ NALIDM++K G + AL V
Sbjct: 140 PDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLALDV 199
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+V+TWT++I A+HG GR AL +F M+ ++PN +TF+ +L ACCH GLV
Sbjct: 200 FNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLV 259
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR F IM +Y IEP E YGCM+DLLGRA L +A L++ M N IWGSLLA
Sbjct: 260 EEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLA 319
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GD+ELG A + +++L+P++ G +LSNIYA G WN+ ++R VM G K
Sbjct: 320 ACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEVRGVMEVQGTWKK 379
Query: 313 PGCSYIEVSKRVHEFVAG 330
GCS++E++ VH+F G
Sbjct: 380 KGCSWMELNGSVHQFAVG 397
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 35/226 (15%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA---- 121
M+ V PD++ + LS CA + G+ IH+Y+ ++ AL++MYA
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 60
Query: 122 ---------------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
K+GK+ A +F M K V++W+ MIAG A
Sbjct: 61 MEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAES 120
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
EAL++F M+R+ VKP+EIT ++++SAC +VG +E R + +++ KI
Sbjct: 121 SKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMC--KILP 178
Query: 215 YG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
G +ID+ + G L A + MP + N W S++ AS ++GD
Sbjct: 179 IGNALIDMFSKCGSLTLALDVFNAMP-QKNVVTWTSIITASAMHGD 223
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 232/355 (65%), Gaps = 2/355 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y +++AR +F+ + ++N++SW LI GY + I +FR MQ+ KP
Sbjct: 183 LVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPV 242
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ M+ L ACA LGA+ G WI +YI+ L V + ALIDMYAK G + +A ++F+
Sbjct: 243 EVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFK 302
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ K+V TW +I+G A++G G AL FSRM + KP+E+TF+ +L ACCH GLV
Sbjct: 303 AMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNE 362
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR YF MK +G+ P+IE YGCM+DLLGRAG+L EA++L++ M + + IW LL A
Sbjct: 363 GRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGAC 422
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+G+++LGE A++ L++LEP+N NY +L+N+YA RW++ G++R++M V+K+PG
Sbjct: 423 RIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPG 482
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
CS IE+ V+EFV + P F+ +Y++L +N ++K A ++ + +G+ D+
Sbjct: 483 CSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVAD--TGMASYDI 535
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 11/232 (4%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
++I Y ++ ++ ++ +M + PD L + AQL ELG+ IH I Q
Sbjct: 112 SMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQM 171
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
G + V ++ AL++MY + A QVF+ + ++++++W +I G + + R+ +D+F
Sbjct: 172 GFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVF 231
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYGCMIDL 221
M+ A KP E+T + +L AC H+G + GR Y + + R + +ID+
Sbjct: 232 REMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTA----LIDM 287
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ G + EAEK+ + M + N W L++ + G GE ALQ ++
Sbjct: 288 YAKCGVVDEAEKIFKAMRVK-NVYTWNVLISGYAMNGR---GESALQAFSRM 335
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/360 (43%), Positives = 227/360 (63%), Gaps = 13/360 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT++AGYAKVG+L A LF + ++++SW +LI+GYAQ LF RM ENV
Sbjct: 233 WNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENV 292
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD++ ++ +SA A++GA++ G WIH + +ALIDMY K G I +A
Sbjct: 293 KPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFV 352
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + K V TWTTMI G A HG G +AL++FS M+ A KPN++TF+++L+AC H GL
Sbjct: 353 IFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKPNDVTFVSVLAACSHSGL 411
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G + F+ MK RY IEP +E YGC++DLL R+G L +A ++ +MP E + +IWG++L
Sbjct: 412 VDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVL 471
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++EL E AL L+KLEP G Y +LSN+YA GRW+ S IR+VM GVKK
Sbjct: 472 SACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKK 531
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVAS 371
+ GCS + V VH+F A + HP + + IL + +M+ LE+DV S
Sbjct: 532 IAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR------------LEADVPS 579
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 136/279 (48%), Gaps = 37/279 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y G AR LF+ M+++NV+S+ T+I G+A++ + LF M+ ++
Sbjct: 102 NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLE 161
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ ML L C QLG +LG+ +H IE+ ++ + L NAL+DMY K ++ A +V
Sbjct: 162 PDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKV 221
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALD------------------------------ 162
F+ K ++W T+IAG A G A D
Sbjct: 222 FDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVK 281
Query: 163 -MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMI 219
+F+RM VKP+++T + ++SA +G ++ GR + + KIE + +I
Sbjct: 282 CLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLA---VKMLTKIEAFSGSALI 338
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
D+ + G ++ A + ++P E + W +++ +G
Sbjct: 339 DMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG 376
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITL 62
+SRLL+ + + +L A LF T N+ + T+I G+ ++ +A T+
Sbjct: 1 MSRLLF------FSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTI 52
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYA 121
+R M PD L L + V+ IH + +GL + L N+LI Y
Sbjct: 53 YRSMLQNGTYPDRQTFLYLLQTTKFVAEVK---QIHCHALVFGLLSKEEYLRNSLIKRYV 109
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
+G A Q+F+ M +++V+++ TMI G A G L++F M ++P++ T +
Sbjct: 110 DNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLG 169
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+L C +G +LG+ ++ G + Y ++D+ + L+ A K+ P E
Sbjct: 170 LLLLCGQLGETKLGKSVHAQIEKSIG-SSNLILYNALLDMYVKCNELKLARKVFDG-PME 227
Query: 242 ANAAIWGSLLAASNIYGDVELG 263
+ W +++A G++EL
Sbjct: 228 KDTVSWNTIIAGYAKVGELELA 249
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV YAK GDL +A LF+ M +N +SW+ +IA Y+Q +QP EA+ LF+ M E V
Sbjct: 312 WTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGV 371
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P +++ LSACAQLG ++LG WI+ NY+ V L NA ID+YAK G A
Sbjct: 372 EPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAAS 431
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F M ++V++W +MI A+HG E L +F +++ + P+EITF+ +LSAC H G
Sbjct: 432 KLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSG 491
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GRRYF MK YGIEPK E Y CMIDLLG+ G L+EA ++ + MP E + A WG+L
Sbjct: 492 LVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGAL 551
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +YG+VE+GE A L++L P +SG Y ++S IYA +W++ +R +MR+ GVK
Sbjct: 552 LNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVK 611
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PGCS IEV + HEF+ D SH + +Y L I +K+
Sbjct: 612 KNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFHLKW 654
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N +V YA L +AR LF+ M +++V+SWTTL+ GYA+ +EA +F RM V +
Sbjct: 180 NALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGL 239
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------ 119
+P+E+ ++A +SA Q+G + G ++ Y+ G+ V L NALIDM
Sbjct: 240 QPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASARE 299
Query: 120 -------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
YAK G + A ++F++M ++ ++W+ MIA + EA
Sbjct: 300 VFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEA 359
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK----IEQYG 216
+ +F M V+P +++LSAC +G ++LGR ++ Y I K +
Sbjct: 360 VRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYD----NYVISGKAVLTVNLGN 415
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
ID+ + G A KL M E N W S++ A ++G E
Sbjct: 416 AFIDVYAKCGDFDAASKLFAEMA-ERNVVSWNSMIMAHAVHGQSE 459
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 42/297 (14%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA---QLGAVELGE 95
N T++ + + P+ A LFRR+ E++ D ++ A+ A A + + GE
Sbjct: 101 NAYMLATMMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGE 160
Query: 96 WIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+H ++G + V + NAL+ YA + A +F+ M ++ V++WTT++ G A
Sbjct: 161 GVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARR 220
Query: 155 GLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 212
GL EA +F RM A ++PNE+T +A++SA +GL+ GR Y + G +
Sbjct: 221 GLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNL 280
Query: 213 E--------QYGC---------------------MIDLLGRAGYLQEAEKLLRRMPFEAN 243
E ++GC M++ + G L+ A +L MP N
Sbjct: 281 ENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMP-RRN 339
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAI----LGRW 294
A W ++AA + E + +I+ +EP N+G ++LS + LGRW
Sbjct: 340 AVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRW 396
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 232/351 (66%), Gaps = 9/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++AGY + GD++ AR +F+ M E+NV+SWTT+IAG AQ+ + +A+ LF M+ V
Sbjct: 102 WNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV 161
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNT--IVPLNNALIDMYAKSGKIG 127
K D++A++AALSACA+LG ++LG WIH+YI++ + N +V LNN+LI MYA G I
Sbjct: 162 KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID 221
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV---KPNEITFIAILS 184
KA +VF M+ +S I+WT+MI G A G EAL +F M+R +P+ ITFI +L
Sbjct: 222 KAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLC 281
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H G V+ GR +F M ++GI P+IE YGCM+DLL RAG+L EA +L+ MP + N
Sbjct: 282 ACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND 341
Query: 245 AIWGSLLAASNIYGDVELGECALQHL-IKLEPHNSGNY-AILSNIYAILGRWNESGKIRK 302
A+WG+LL I+ + EL Q L ++L+P + Y +LSN+YA RW + +R+
Sbjct: 342 AVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQ 401
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
M ++GV+K G S+++++ VH+FVAGD +H +Y++L KI Q K
Sbjct: 402 KMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 452
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 38/253 (15%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
+I G++Q + P++ + L+ RM +P+E + CA+ + GE +H + G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 106 LNTIVPLNNALIDMYA----------------------------------KSGKIGKALQ 131
T V + +L+++YA + G + A +
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M ++V++WTTMIAG A G ++AL +F M RA VK +++ +A LSAC +G
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 192 VELGRRYFNIMKSRY--GIEP-KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
++LG + + R G +P + +I + G + +A K+ M + + W
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS-WT 239
Query: 249 SLLAASNIYGDVE 261
S++ G E
Sbjct: 240 SMITGFAKQGHAE 252
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
LL N+++ YA G ++ A +F M +++ ISWT++I G+A+ EA+ +F+ M
Sbjct: 202 LLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM 261
Query: 67 Q---VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAK 122
Q + +PD I + L AC+ G V+ G + +++G+ + ++D+ ++
Sbjct: 262 QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSR 321
Query: 123 SGKIGKALQVFENMKNK-SVITWTTMIAGLALH 154
+G + +A ++ E+M K + W ++ G +H
Sbjct: 322 AGFLDEAHRLIESMPMKPNDAVWGALLGGCRIH 354
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K GDL++AR +F+ M +K+V++W +I GYAQ +EAI LF M+ V
Sbjct: 266 SALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVN 325
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I ++ LSACA +GA++ G+W+ Y + GL + ++ ALIDMYAK G + AL+V
Sbjct: 326 PDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRV 385
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
FE+M K+ ++W MI+ LA HG +E+L +F RM E V+PN+I+FI +LSAC H G
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR+ F++M S +G+ PKIE + CM+DLL RAG++ EA + +MP + + + G+L
Sbjct: 446 LVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGAL 505
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +V++ E + L+++EP NSGNY I S I+A + RW++S ++R +MR GV
Sbjct: 506 LGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVT 565
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS+IE+ +VHEF AGD H + Q++ +N +MK
Sbjct: 566 KTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMK 607
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 147/246 (59%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y++ G+L AR +F+ ++EK+++SW ++I+GY++M +A+ LF M+ +
Sbjct: 165 HSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFE 224
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ +++ L AC LG + LG WI ++ + ++ + +ALI MY K G + A +V
Sbjct: 225 PDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRV 284
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K V+TW MI G A +G+ EA+ +FS M + V P++IT + +LSAC +G +
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGAL 344
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G ++ + S G++ I +ID+ + G L +A ++ MP + N W ++++
Sbjct: 345 DFG-KWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMP-QKNEVSWNAMIS 402
Query: 253 ASNIYG 258
A +G
Sbjct: 403 ALAFHG 408
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP-NEAITLFRRMQVENV 71
N ++ + + D NNA LF + N ++ +I G Q N I + +M+ +
Sbjct: 63 NFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGI 122
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ ACA L + G+ H+ + + GL + ++LI MY++ G++G A +
Sbjct: 123 RPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARR 182
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + K +++W +MI+G + G +A+ +F M A +P+E+T ++IL AC +G
Sbjct: 183 VFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGD 242
Query: 192 VELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+ LG + E + + +I + G+ G L A ++ RM + + W +
Sbjct: 243 LGLGSWIEGFVVEN---EMDLNSFVGSALIGMYGKCGDLSSARRVFDRM-VKKDVVTWNA 298
Query: 250 LLAA 253
++
Sbjct: 299 MITG 302
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 234/357 (65%), Gaps = 2/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK D+ A +F+ +T++N+++W+T+I+GYA++ NEA+ LFR MQ V
Sbjct: 200 TALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVV 259
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M++ +SACA GA++ G+W+H YI + + T + L+ AL++MYAK G I +A +V
Sbjct: 260 PDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEV 319
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K W++MI GLA++GL +AL+ F RME A+VKPN +TFI +LSAC H GLV
Sbjct: 320 FDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLV 379
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRRY++ M +GI P +E YGCM+DLL RA +++A L+ MP N IW +LL
Sbjct: 380 SEGRRYWSSML-EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLV 438
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+++ E Q L++LEPHN+ NY +LSN+YA + +W + ++RK M+ MG+K +
Sbjct: 439 GCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAV 498
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PGCS IEV VHEFV GD SHP+ + +IL I+ ++ H Q S VL + V
Sbjct: 499 PGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGH-QPGISDVLHNVV 554
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 142/254 (55%), Gaps = 7/254 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVK-PDEIAMLA 80
GD++ AR LF + N+ SW ++I G +Q P+ E + LFR+M P+ M
Sbjct: 107 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 166
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
L AC+ + A+E G+ +H + + G + + AL++ YAK I A +VF+ + +++
Sbjct: 167 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 226
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++ W+TMI+G A GL EAL +F M++A V P+E+T ++++SAC G ++ G ++ +
Sbjct: 227 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTG-KWVH 285
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
++ IE +E ++++ + G ++ A+++ MP + A W S++ I G
Sbjct: 286 AYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKA-WSSMIVGLAING-- 342
Query: 261 ELGECALQHLIKLE 274
L E AL+ ++E
Sbjct: 343 -LAEDALEEFFRME 355
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 220/334 (65%), Gaps = 3/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
W TM+ GY + D++ AR LF+ M E+N++SW T+I GY Q QP E ITLF+ MQ +
Sbjct: 210 WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGITLFQEMQATTS 269
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD++ +L+ L A + GA+ LGEW H ++++ L+ V + A++DMY+K G+I KA
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K V +W MI G AL+G R ALD+F M KP+EIT +A+++AC H G
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGG 388
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR++F++M+ G+ KIE YGCM+DLLGRAG L+EAE L+ MPFE N I S
Sbjct: 389 LVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF 447
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A Y D+E E L+ ++LEP N GNY +L N+YA RW++ G ++ VMR K
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAK 507
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K GCS IE++ V EF++GDT+HP ++ +L
Sbjct: 508 KEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 27/332 (8%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F +V + VG + AR LF+ +++ ++I Y + Q ++ L+R ++ E
Sbjct: 13 FTKFLVISASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE 71
Query: 70 NV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +C+ V G +H+ I ++G + ++ ++DMYAK GK+G
Sbjct: 72 TCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGC 131
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A F+ M ++S ++WT +I+G G A +F +M + + + + A++
Sbjct: 132 ARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVK 188
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + RR F+ M + I + MI + A KL MP E N W
Sbjct: 189 SGDMTSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWN 242
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI-------LGRWNESGKIR 301
+++ + G Q + + + ILS + AI LG W R
Sbjct: 243 TMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 302 KVMRDMGVKKMPG-------CSYIEVSKRVHE 326
K + D VK C IE +KR+ +
Sbjct: 303 KKL-DKKVKVCTAILDMYSKCGEIEKAKRIFD 333
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 228/355 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L AR +F M K+ +SW+T+I G+A N+A FR ++ E +
Sbjct: 206 WNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGM 265
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+++ LSACAQ GA E G +H ++E+ G I+ +NNALID Y+K G + A
Sbjct: 266 RPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARL 325
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+NM +S ++WT MIAG+A+HG G EA+ +F+ ME + +KP+ ITFI+IL AC H GL
Sbjct: 326 VFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGL 385
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+LG YF+ M + YGIEP IE YGCM+DL GRAG LQ+A + +MP N +W +LL
Sbjct: 386 VDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLL 445
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +I+G++ L + L +L+P NSG++ +LSNIYA+ G+W + +R+ M +KK
Sbjct: 446 GACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKK 505
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
PG S IEV++ ++ FVAG+ + +Q L +I +++ E VL
Sbjct: 506 TPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLH 560
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 46/279 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T+++ YA+ L AR +F+ M E N+++W ++A + + +A +FR M + N
Sbjct: 145 TTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRN-- 202
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
L W N ++ Y K+G++ A +V
Sbjct: 203 --------------------LTSW-----------------NIMLAGYTKAGELQLAREV 225
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K ++W+TMI G A +G +A F + R ++PNE++ +LSAC G
Sbjct: 226 FMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAF 285
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR ++ + G I +ID + G L A + M +A W +++A
Sbjct: 286 EFGRILHGFVE-KSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIA 343
Query: 253 ASNIYGDVELGECALQHLIKLEPHN--SGNYAILSNIYA 289
++G GE A++ ++E N + +S +YA
Sbjct: 344 GMAMHG---YGEEAIRLFNEMEESNIKPDSITFISILYA 379
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 50/274 (18%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--GKIGKALQV 132
E+ LA S C L V+ I I + LN+ ++ L+ A + + A ++
Sbjct: 5 ELHCLALFSKCKSLRTVK---QIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRL 61
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-PNEITFIAILSA------ 185
F +++N V + T+I GL+ AL +F M R V P+ +F +L A
Sbjct: 62 FLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRA 121
Query: 186 --------CCHVG---------------------LVELGRRYFNIMKSRYGIEPKIEQYG 216
C VG + R+ F+ M IEP I +
Sbjct: 122 LTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-----IEPNIVAWN 176
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
++ R +++AE++ R MP N W +LA G+++L A + +K+
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIR-NLTSWNIMLAGYTKAGELQL---AREVFMKMPLK 232
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +++ + +A G +N++ + +R G++
Sbjct: 233 DDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMR 266
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 220/337 (65%), Gaps = 2/337 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G+L A LFE + K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF ++ +KS+ +W MI G A+HG + D+FSRM + ++P++ITF+ +LSAC
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VELGE ++LIK+EP N G+Y +LSNIYA GRWNE K R ++ D
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 602 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 146/248 (58%), Gaps = 2/248 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G + NA+ LF+ + K+V+SW +I+GYA+ EA+ LF+ M NV
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ +SACAQ G++ELG +H +I+ +G + + + NALID+Y+K G++ A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K G+ +ID+ + G ++ A ++ + + + W ++
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAM 441
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 442 IFGFAMHG 449
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++F+ + E N++ W T+ G+A P A+ L+ M + P+ L +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN------ 138
CA+ A + G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 139 -------------------------KSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
K V++W MI+G A G +EAL++F M + V+
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T + ++SAC G +ELGR+ ++ +G ++ +IDL + G L+ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L R+P++ + W +L+
Sbjct: 323 LFERLPYK-DVISWNTLIGG 341
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 234/357 (65%), Gaps = 2/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK D+ A +F+ +T++N+++W+T+I+GYA++ NEA+ LFR MQ V
Sbjct: 131 TALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVV 190
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M++ +SACA GA++ G+W+H YI + + T + L+ AL++MYAK G I +A +V
Sbjct: 191 PDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEV 250
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K W++MI GLA++GL +AL+ F RME A+VKPN +TFI +LSAC H GLV
Sbjct: 251 FDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLV 310
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRRY++ M +GI P +E YGCM+DLL RA +++A L+ MP N IW +LL
Sbjct: 311 SEGRRYWSSML-EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLV 369
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+++ E Q L++LEPHN+ NY +LSN+YA + +W + ++RK M+ MG+K +
Sbjct: 370 GCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAV 429
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PGCS IEV VHEFV GD SHP+ + +IL I+ ++ H Q S VL + V
Sbjct: 430 PGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGH-QPGISDVLHNVV 485
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 142/254 (55%), Gaps = 7/254 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVK-PDEIAMLA 80
GD++ AR LF + N+ SW ++I G +Q P+ E + LFR+M P+ M
Sbjct: 38 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
L AC+ + A+E G+ +H + + G + + AL++ YAK I A +VF+ + +++
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++ W+TMI+G A GL EAL +F M++A V P+E+T ++++SAC G ++ G ++ +
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTG-KWVH 216
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
++ IE +E ++++ + G ++ A+++ MP + A W S++ I G
Sbjct: 217 AYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKA-WSSMIVGLAING-- 273
Query: 261 ELGECALQHLIKLE 274
L E AL+ ++E
Sbjct: 274 -LAEDALEEFFRME 286
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 227/340 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y+ +G L +A +FE+M+ ++ ++W ++I G+A PNEA+TL+R M E V+
Sbjct: 175 NSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE 234
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ LSAC +LGA+ LGE +H Y+ + GL +NAL+D+Y+K G A +V
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ +SV++WT++I GLA++GLG EAL +F +ER +KP+EITF+ +L AC H G++
Sbjct: 295 FDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK YGI P+IE +GCM+DLL RAG + +A +R MP NA IW +LL
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G +ELGE A + +LE +SG++ +LSN+YA RW + +RK+M GVKK
Sbjct: 415 ACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKT 474
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S +E+ RV+EF+ GD SHP + Y +L KI +K
Sbjct: 475 PGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 6/248 (2%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACA 86
A +F + N+ +W T+I G+A+ + P+ A+ LF +M ++ PD A A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
+L V LGE IH+ + + G +++ + N+L+ MY+ G + A QVFE M + + W +
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
+I G AL+G+ EAL ++ M V+P+ T +++LSAC +G + LG R M +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYM-VKV 266
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
G+ ++DL + G ++A+K+ M E + W SL+ + G LG A
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLIVGLAVNG---LGNEA 322
Query: 267 LQHLIKLE 274
L+ +LE
Sbjct: 323 LKLFGELE 330
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 97 IHNYIEQYGLNTIVP-LNNALI-DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH + ++G+ P N LI + + S + A Q+F ++ ++ TW TMI G A
Sbjct: 54 IHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAES 113
Query: 155 GLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
A+++FS+M A + P+ TF + A + V LG +++ R G +
Sbjct: 114 ENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVV-VRNGFDSLRF 172
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + G L A ++ M + A W S++
Sbjct: 173 VQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVA-WNSVI 209
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/360 (43%), Positives = 227/360 (63%), Gaps = 13/360 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT++AGYAKVG+L A LF + ++++SW +LI+GYAQ LF RM ENV
Sbjct: 298 WNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENV 357
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD++ ++ +SA A++GA++ G WIH + +ALIDMY K G I +A
Sbjct: 358 KPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFV 417
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + K V TWTTMI G A HG G +AL++FS M+ A KPN++TF+++L+AC H GL
Sbjct: 418 IFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKPNDVTFVSVLAACSHSGL 476
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G + F+ MK RY IEP +E YGC++DLL R+G L +A ++ +MP E + +IWG++L
Sbjct: 477 VDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVL 536
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++EL E AL L+KLEP G Y +LSN+YA GRW+ S IR+VM GVKK
Sbjct: 537 SACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKK 596
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVAS 371
+ GCS + V VH+F A + HP + + IL + +M+ LE+DV S
Sbjct: 597 IAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR------------LEADVPS 644
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 136/279 (48%), Gaps = 37/279 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y G AR LF+ M+++NV+S+ T+I G+A++ + LF M+ ++
Sbjct: 167 NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLE 226
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ ML L C QLG +LG+ +H IE+ ++ + L NAL+DMY K ++ A +V
Sbjct: 227 PDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKV 286
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALD------------------------------ 162
F+ K ++W T+IAG A G A D
Sbjct: 287 FDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVK 346
Query: 163 -MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMI 219
+F+RM VKP+++T + ++SA +G ++ GR + + KIE + +I
Sbjct: 347 CLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLA---VKMLTKIEAFSGSALI 403
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
D+ + G ++ A + ++P E + W +++ +G
Sbjct: 404 DMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG 441
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAI 60
F +SRLL+ + + +L A LF T N+ + T+I G+ ++ +A
Sbjct: 64 FPMSRLLF------FSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAF 115
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDM 119
T++R M PD L L + V+ IH + +GL + L N+LI
Sbjct: 116 TIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK---QIHCHALVFGLLSKEEYLRNSLIKR 172
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y +G A Q+F+ M +++V+++ TMI G A G L++F M ++P++ T
Sbjct: 173 YVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTM 232
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ +L C +G +LG+ ++ G + Y ++D+ + L+ A K+ P
Sbjct: 233 LGLLLLCGQLGETKLGKSVHAQIEKSIG-SSNLILYNALLDMYVKCNELKLARKVFDG-P 290
Query: 240 FEANAAIWGSLLAASNIYGDVELG 263
E + W +++A G++EL
Sbjct: 291 MEKDTVSWNTIIAGYAKVGELELA 314
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 225/332 (67%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G ++A LF M ++V+SW +++A YAQ +PNEA+ LF +M+ VKP E +++ L
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
SACA LGA++ G +H YI + + AL+DMYAK GKI A QVF M++K V+
Sbjct: 222 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 281
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W T+IAG+A+HG +EA +F M+ A V+PN+ITF+A+LSAC H G+V+ G++ + M
Sbjct: 282 AWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 341
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
S YGIEPK+E YGC+IDLL RAG L+EA +L+ MP E N G+LL I+G+ EL
Sbjct: 342 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFEL 401
Query: 263 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 322
GE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+ K+PG S IE+
Sbjct: 402 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 461
Query: 323 RVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 462 MVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 493
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G ++ A +F M K+V++W T+IAG A EA LF+ M+ V+
Sbjct: 253 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVE 312
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P++I +A LSAC+ G V+ G+ + + + YG+ V +ID+ A++G + +A++
Sbjct: 313 PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAME 372
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ M + ++ G +HG
Sbjct: 373 LIGTMPMEPNPCALGALLGGCRIHG 397
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 233/350 (66%), Gaps = 6/350 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
WN M++ Y +VGDL++AR LF M +NV++W ++IAGYAQ Q AI LF+ M +
Sbjct: 172 WNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 231
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PDE+ M++ +SAC LGA+ELG W+ ++ + + + +NA+I MY++ G + A
Sbjct: 232 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 291
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M + V+++ T+I+G A HG G EA+++ S M+ ++P+ +TFI +L+AC H G
Sbjct: 292 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 351
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E GR+ F +K +P I+ Y CM+DLLGR G L++A++ + RMP E +A ++GSL
Sbjct: 352 LLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 406
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L AS I+ VELGE A L +LEP NSGN+ +LSNIYA GRW + +IR+ M+ GVK
Sbjct: 407 LNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVK 466
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
K G S++E ++H+F+ D SH D +YQ+L ++ +M+ A ++ ++
Sbjct: 467 KTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 516
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GY K A+ LF++M E+NVI+WT ++ GYA++ A F M +V
Sbjct: 77 WNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A LS AQ G E E + + E G NA+I Y + G + A +
Sbjct: 137 ----VSWNAMLSGYAQNGLAE--EALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARK 190
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHVG 190
+F M ++V+TW +MIAG A +G A+++F M A ++ P+E+T ++++SAC H+G
Sbjct: 191 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 250
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ELG + I+ I + MI + R G +++A+++ + M
Sbjct: 251 ALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 297
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 50 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 109
Y+ + + + ++ +MQ V+PD + L A G + H ++ + G +
Sbjct: 5 YSHLQDHAKVVLMYEQMQGCGVRPDAF-VYPILIKSAGTGGIGF----HAHVLKLGHGSD 59
Query: 110 VPLNNALIDMYAK---------SG-----KIGKALQVFENMKNKSVITWTTMIAGLALHG 155
+ NA+IDMYA+ SG G+A +F+ M ++VITWT M+ G A
Sbjct: 60 AFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVK 119
Query: 156 LGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
A F M ER+ V N A+LS GL E R F+ M Y
Sbjct: 120 DLEAARRYFDCMPERSVVSWN-----AMLSGYAQNGLAEEALRLFDEMLGAY---RNSVT 171
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ MI R G L A KL MP N W S++A
Sbjct: 172 WNAMISAYMRVGDLDSARKLFNTMPGR-NVVTWNSMIAG 209
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 226/345 (65%), Gaps = 3/345 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
W TM+ GY D+++AR LF+ M E+N++SW T+I GY Q QP EAI LF+ MQ +
Sbjct: 210 WTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTS 269
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD++ +L+ L A + GA+ LGEW H ++++ L+ V + A++DMY+K G+I KA
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K V +W MI G AL+G ALD+F M + KP+EIT +A++SAC H G
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE-KPDEITMLAVISACNHGG 388
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR++F +M+ ++G+ KIE YGCM+DLLGRAG L++AE L+ MPF+ N I S
Sbjct: 389 LVEEGRKWFQMMR-KFGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPNGIILSSF 447
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A Y D+E E L+ ++LEP N GNY +L N+YA RW++ G ++ +MR K
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNMMRKNEAK 507
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
K GCS IE++ V EF++GDT+HP ++ +L K+ MK E
Sbjct: 508 KEVGCSLIEINYIVSEFISGDTTHPHRQSIHLVLEKLLVHMKEEE 552
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 137/335 (40%), Gaps = 33/335 (9%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F +V + VG + AR LF+ + + ++I Y + N++ +R ++ E
Sbjct: 13 FTKFLVISASAVG-IGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLRKE 71
Query: 70 N-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ PD +C V G +H+ I + G + ++ ++DMYAK GK+G
Sbjct: 72 TCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGC 131
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A VF+ M +S ++WT +I G G A +F +M + + + + + A++
Sbjct: 132 ARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVK---DVVIYNAMMDGFVK 188
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + RR F+ M + I + MI + + A KL MP E N W
Sbjct: 189 SGDMTSARRLFDEMTHKTVI-----TWTTMIHGYCNSNDIDSARKLFDAMP-ERNLVSWN 242
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI-------LGRW------- 294
+++ + Q + + + ILS + AI LG W
Sbjct: 243 TMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 295 ---NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 326
++ K+ + DM K C IE +KR+ +
Sbjct: 303 KNLDKKVKVCTAILDMYSK----CGEIEKAKRIFD 333
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 226/344 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y+K G ++A +F M +N++SW LIAGY Q ++ EA+ +F+ M +E ++
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIE 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + +AL+ACAQLG+++ G W+H Y+++ L L AL+DMY+K G + +AL V
Sbjct: 304 PNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K V WT MI GLA+ G +L++FS+M R+RV+PN +TF+ +LSAC H GLV
Sbjct: 364 FEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G F +M Y +EP ++ YGCM+DLLGRAG L+EA K + MP E +WG+L +
Sbjct: 424 DEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFS 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ ELGE HLIKL+PH+SG Y +L+N+Y+ +W + +R++M+ GV K
Sbjct: 484 GCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKS 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
PGCS+IEV+ +HEF+A D SH + +Y +L ++ Q+K A +
Sbjct: 544 PGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATY 587
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 5/249 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V+ +A G ++ +R LF +K+V+SWT LI G + + EA+ F M+ V+
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+ +++ L A A L V G W+H Y+E + V + +AL+DMY+K G A++
Sbjct: 202 VDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M +++++W +IAG +EAL +F M ++PN+ T + L+AC +G
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321
Query: 192 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ GR + +S+ G+ K+ ++D+ + G + EA + ++P + W ++
Sbjct: 322 LDQGRWLHEYVDRSKLGLNSKLGT--ALVDMYSKCGCVDEALLVFEKLP-AKDVYPWTAM 378
Query: 251 LAASNIYGD 259
+ + GD
Sbjct: 379 INGLAMRGD 387
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
DL LF+ + + W T+I G++ QP + + R++ V PD L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A ++L E + +I ++GL+ + N+L+ +A G + + ++F K V++
Sbjct: 113 AFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVS 171
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
WT +I G +G EAL+ F M + V+ +E+T +++L A + V GR
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + ++D+ + GY +A K+ MP N WG+L+A
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP-TRNLVSWGALIAG 280
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y+K G ++ A +FE + K+V WT +I G A ++ LF +M
Sbjct: 342 KLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRS 401
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V+P+ + L LSACA G V+ G E I Y L V ++D+ ++G++ +
Sbjct: 402 RVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEE 461
Query: 129 ALQVFENMKNKSVI-TWTTMIAGLALH 154
A++ E+M + W + +G +H
Sbjct: 462 AIKFIESMPMEPTPGVWGALFSGCMIH 488
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 231/351 (65%), Gaps = 9/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++AGY + GD++ AR +F+ M E+NV+SWTT+IAG AQ+ + +A+ LF M+ V
Sbjct: 204 WNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV 263
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNT--IVPLNNALIDMYAKSGKIG 127
K D++A++AALSACA+LG ++LG WIH+YI++ + N +V LNN+LI MYA G I
Sbjct: 264 KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID 323
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV---KPNEITFIAILS 184
KA +VF M+ +S I+WT+MI G A G EAL +F M+R +P+ ITFI +L
Sbjct: 324 KAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLC 383
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H G V+ GR +F M ++GI P+IE YGCM+DLL RAG+L EA +L MP + N
Sbjct: 384 ACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPND 443
Query: 245 AIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNY-AILSNIYAILGRWNESGKIRK 302
A+WG+LL I+ + EL Q L+ +L+P + Y +LSN+YA RW + +R+
Sbjct: 444 AVWGALLGGCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQ 503
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
M ++GV+K G S+++++ VH+FVAGD +H +Y++L KI Q K
Sbjct: 504 KMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 554
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 38/284 (13%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ Y G+L NA +FE + + W +I G++Q + P++ + L+ RM +P+
Sbjct: 72 LLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPN 131
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA------------- 121
E + CA+ + GE +H + G T V + +L+++YA
Sbjct: 132 EFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARR 191
Query: 122 ---------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ G + A ++F+ M ++V++WTTMIAG A G ++A
Sbjct: 192 VFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 251
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY--GIEP-KIEQYGC 217
L +F M RA VK +++ +A LSAC +G ++LG + + R G +P +
Sbjct: 252 LHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNS 311
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+I + G + +A K+ M + + W S++ G E
Sbjct: 312 LIHMYASCGVIDKAYKVFIGMQQRSTIS-WTSMITGFAKQGHAE 354
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
LL N+++ YA G ++ A +F M +++ ISWT++I G+A+ EA+ +F+ M
Sbjct: 304 LLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM 363
Query: 67 Q---VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAK 122
Q + +PD I + L AC+ G V+ G + +++G+ + ++D+ ++
Sbjct: 364 QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSR 423
Query: 123 SGKIGKALQVFENMKNK-SVITWTTMIAGLALH 154
+G + +A ++ E+M K + W ++ G +H
Sbjct: 424 AGFLDEAHRLXESMPMKPNDAVWGALLGGCRIH 456
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH I G + L L+ Y SG + A +VFE ++N S W MI G +
Sbjct: 53 IHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSET 112
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+ +++++RM A +PNE T+ ++ C L+ G + + + G +
Sbjct: 113 PHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVAN-GYCTNVFVRT 171
Query: 217 CMIDLLGRAGYLQEAEKLLRRMP--FEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+++L AG K R + N W SLLA GDV + A + ++
Sbjct: 172 SLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDV---DGARRIFDEMP 228
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
N ++ + A +GR ++ + MR GVK
Sbjct: 229 ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 264
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 220/343 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ Y K GDL +A +F M+ +NV+SW +IAGYAQ + L M+VE
Sbjct: 455 WASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGF 514
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + +++ L AC L A+E G+ +H + GL + + +LI MY+K G++ +A
Sbjct: 515 QPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEART 574
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + N+ + W M+AG HG+G EA+D+F RM + RV PNEITF A++SAC GL
Sbjct: 575 VFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGL 634
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F IM+ + ++P + YGCM+DLLGRAG LQEAE+ ++RMP E + ++W +LL
Sbjct: 635 VQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALL 694
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +V+L E A H+++LEP N+ Y LSNIYA GRW++S K+RKVM D G+KK
Sbjct: 695 GACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKK 754
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
G S IE+ R+H FVA D +HP+ D ++ L + +MK A
Sbjct: 755 DRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEA 797
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 142/251 (56%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+K GD+ + +F MT ++V++W+++IA YA + P +A F RM+ N++
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I L+ L AC +E IH ++ G+ T V + ALI MY+K G+I A ++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK ++V++WT +I A H EA +++ +M +A + PN +TF+++L++C +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRR + + R G+E + +I + + +Q+A + RM + + W +++A
Sbjct: 297 NRGRRIHSHISER-GLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWSAMIA 354
Query: 253 --ASNIYGDVE 261
A + Y D E
Sbjct: 355 GYAQSGYQDKE 365
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 16/307 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ Y+K G+++ A +F+ M E+NV+SWT +I AQ + NEA L+ +M +
Sbjct: 218 TALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGIS 277
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + ++ L++C A+ G IH++I + GL T V + NALI MY K I A +
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337
Query: 133 FENMKNKSVITWTTMIAGLALHGL-GREALD----MFSRMERARVKPNEITFIAILSACC 187
F+ M + VI+W+ MIAG A G +E+LD + RM R V PN++TF++IL AC
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
G +E GR+ + S+ G E + ++ + G + EAE++ +M N W
Sbjct: 398 VHGALEQGRQ-IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAW 455
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL GD+ E ++ N ++ ++ YA +SG I KV +
Sbjct: 456 ASLLTMYIKCGDLTSAEKVFS---EMSTRNVVSWNLMIAGYA------QSGDIAKVFELL 506
Query: 308 GVKKMPG 314
K+ G
Sbjct: 507 SSMKVEG 513
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 2/170 (1%)
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA+L E G+ +H +++ GL + L N+LI+ Y+K G + QVF M + V+TW
Sbjct: 88 CAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTW 147
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++MIA A + +A D F RM+ A ++PN ITF++IL AC + ++E R ++K+
Sbjct: 148 SSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKA 207
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+E + +I + + G + A ++ ++M E N W +++ A+
Sbjct: 208 S-GMETDVAVATALITMYSKCGEISLACEIFQKMK-ERNVVSWTAIIQAN 255
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 219/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G+ + G + A +F+ M E+ VISWT LI G+ +M EA+ FR+MQV V
Sbjct: 82 WNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKV 141
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++ LSACA LGA+ LG W+H Y + GL V + N+LID+Y++ G I A Q
Sbjct: 142 EPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQ 201
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M +++++W ++I GLA +G EAL+ F M++ KPN+++F L+AC H GL
Sbjct: 202 VFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGL 261
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +YF+IM+ + I P+IE YGC++DL RAG L++A +++ MP + N + GSLL
Sbjct: 262 VDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLL 321
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA GDVEL E + +L+ L+P NY +LSNIYA +GRW+ + K R M+ +G++K
Sbjct: 322 AACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRWDGACKQRMTMKALGIQK 381
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IE+ +HEFVAGD SH + +Y +L
Sbjct: 382 KPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSML 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 45/242 (18%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAV--ELGEWIHNYIEQYGLNTI-VPLNNALIDMYAK 122
M++ + P+ + + LS CA L + LG +H Y + GL+T + + AL+DMYAK
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 123 -------------------------------SGKIGKALQVFENMKNKSVITWTTMIAGL 151
+GKI +A++VF+ M + VI+WT +I G
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGI 208
GL EAL+ F +M+ ++V+P+ +T + +LSAC ++G + LG RY + G+
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRY----ALKKGL 176
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
++ +IDL R G ++ A ++ +M E W S++ G E AL+
Sbjct: 177 RDNVKICNSLIDLYSRCGAIELARQVFEKMG-ERTLVSWNSIIGGLAANG---FTEEALE 232
Query: 269 HL 270
H
Sbjct: 233 HF 234
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 53/203 (26%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y++ G + AR +FE M E+ ++SW ++I G A EA+ F MQ +
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-------EWIHNY---IEQYGLNTIVPLNNALIDM 119
KP++++ AL+AC+ G V+ G E +H IE YG ++D+
Sbjct: 241 GFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYG---------CIVDL 291
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y+++G++ A+ V +NM +KPNE+
Sbjct: 292 YSRAGRLEDAMSVVQNMP----------------------------------MKPNEVVV 317
Query: 180 IAILSACCHVGLVELGRRYFNIM 202
++L+AC G VEL R N +
Sbjct: 318 GSLLAACRTRGDVELAERLMNYL 340
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 221/333 (66%), Gaps = 3/333 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++++GY+K G ++ A +F+LM +KN SW ++A Y Q ++ +EA LF RM+ EN
Sbjct: 191 WTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENN 250
Query: 72 KP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
D+ LSAC LGA++ G+WIH YI++ G+ L A++DMY K G + KAL
Sbjct: 251 NVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKAL 310
Query: 131 QVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
QVF ++ + + +W MI GLA+HG G A+ +F MER RV P++ITF+ +L+AC H
Sbjct: 311 QVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAH 370
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE GR YF+ M YGIEP++E +GCM+DLLGRAG + EA KL+ MP + + G
Sbjct: 371 SGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLG 430
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL A + ++ELGE + +I+LEP+NSG Y +L+N+YA G+W ++ K+RK+M D G
Sbjct: 431 TLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRG 490
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
VKK PG S IE+ VHEF+AG+ +HP L+
Sbjct: 491 VKKAPGFSMIELQGTVHEFIAGERNHPQAKELH 523
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGY--AQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
L A LF+ + + + + T+I G+ +Q+ N + L+ M +V P+ + L
Sbjct: 73 LTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLL 132
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC + ++ G IH ++ ++G N+LI MY + +A +VF + + +
Sbjct: 133 IACRK---IQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSV 189
Query: 143 TWTTMIAGLALHGLGREALDMFSRM----------------------------ERARVKP 174
+WT++I+G + GL EA +F M +R + +
Sbjct: 190 SWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAEN 249
Query: 175 NEI--TFIA--ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
N + F+A +LSAC +G ++ G+ +K R GIE + ++D+ + G L++
Sbjct: 250 NNVLDKFVATTMLSACTGLGALDQGKWIHEYIK-RNGIELDSKLTTAIVDMYCKCGCLEK 308
Query: 231 AEKLLRRMPFEAN-AAIWGSLLAASNIYGDVELGECALQHLIKLE 274
A ++ +P + W ++ ++G+ GE A+Q ++E
Sbjct: 309 ALQVFHSLPLPCRWISSWNCMIGGLAMHGN---GEAAIQLFKEME 350
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 229/343 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA GD+ AR +F+ +++ SW+++I+ YA+ EA+ L+R M+V V
Sbjct: 150 WNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGV 209
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I+M++ LSAC+ +GA+ +G +H ++E + + L AL+DMYAK G I +L+
Sbjct: 210 APDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLK 269
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M K V+TW++MI GLA HGLG +AL +FS M ++PNEITFI +L AC HVGL
Sbjct: 270 VFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGL 329
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G++YF+ M +G+ P++E YGCM+DLLGRAG+++EA +L+R M F+ + IW +LL
Sbjct: 330 VNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLL 389
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VE+ E A+ L L+P G+Y +LSNIYA W ++RK +R +++
Sbjct: 390 GACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQR 449
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE VHEFV+GD SHP + +Y++L ++ +++ A
Sbjct: 450 VPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQA 492
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V YAK GD+ N+ +F M K+V++W+++I G A ++A++LF M +
Sbjct: 249 KLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQ 308
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++P+EI + L AC +G V G ++ + + +G+ + ++D+ ++G + +
Sbjct: 309 GLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEE 368
Query: 129 ALQVFENMKNK-SVITWTTMIAGLALH 154
A+++ +M K I W T++ +H
Sbjct: 369 AMELIRSMTFKPDPIIWRTLLGACRIH 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------- 155
V L N ++ Y G++ +A +VF+ M + +++W TMI G A+ G
Sbjct: 116 VFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRD 175
Query: 156 -----------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+EAL+++ M A V P+ I+ +++LSAC +G + +G
Sbjct: 176 RDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEV 235
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++S +E ++ ++D+ + G ++ + K+ MP + + W S++
Sbjct: 236 HRFVESNR-VEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMI 286
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 230/356 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y+ G + +AR +F+ MT+++++++ +I GYA + EA+ LF R+Q E +K
Sbjct: 586 NTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 645
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + L+ACA G++E + IH+ + + G + L NAL+ YAK G AL V
Sbjct: 646 PDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLV 705
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++VI+W +I G A HG G++ L +F RM+ +KP+ +TF+++LSAC H GL+
Sbjct: 706 FDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLL 765
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRRYF M +GI P IE YGCM+DLLGRAG L E E L++ MPF+AN IWG+LL
Sbjct: 766 EEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLG 825
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+V + E A + +KL+P N+ Y LS++YA G W+ + K+RK+M GV K
Sbjct: 826 ACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 885
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S+IEV ++H FVA D SHP+ +++Y L K+ MK ++ + S + + D
Sbjct: 886 PGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVD 941
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 135/241 (56%), Gaps = 7/241 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YA+ G + +AR LF M K++ISWT +I G A+ EA+ +F+ MQ +K
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L+AC+ A++ G IH + + GL T + N L++MY+ G + A QV
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++ + MI G A H LG+EAL +F R++ +KP+++T+I +L+AC + G +
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIW 247
E + + ++K Y + + ++ + G +A +K+++R NA I
Sbjct: 665 EWAKEIHSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIG 722
Query: 248 G 248
G
Sbjct: 723 G 723
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 128/225 (56%), Gaps = 3/225 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G + R +FE + +++I+W T+I G A+ EA ++ +MQ E + P+
Sbjct: 386 LVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPN 445
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+I + L+AC A+ G IH+ + + G + + NALI MYA+ G I A +F
Sbjct: 446 KITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFN 505
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K +I+WT MI GLA GLG EAL +F M++A +KPN +T+ +IL+AC ++
Sbjct: 506 KMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW 565
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
GRR + ++++ G+ ++++ G +++A ++ RM
Sbjct: 566 GRRIHQQVIEA--GLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 5 SRLLYKF--WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
+RLL+ N ++ YAK G ++ AR +F+ M K+V+SWT +I GYA A +
Sbjct: 273 ARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEI 332
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
F++MQ E V P+ I + L+A + A++ G+ +H++I G + + + AL+ MYAK
Sbjct: 333 FQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAK 392
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G QVFE + N+ +I W TMI GLA G EA +++ +M+R + PN+IT++ +
Sbjct: 393 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVIL 452
Query: 183 LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC + + GR + ++K + + ++ +I + R G +++A L +M
Sbjct: 453 LNACVNPTALHWGREIHSRVVKDGFMFDISVQN--ALISMYARCGSIKDARLLFNKM 507
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 9/243 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++ Y + G + AR ++ + TE+ V SW ++ GY Q EA+ L R MQ
Sbjct: 180 NALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHG 239
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ + LS+C A+E G IH + L V + N +++MYAK G I +A
Sbjct: 240 LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAR 299
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M+ KSV++WT +I G A G A ++F +M++ V PN IT+I +L+A
Sbjct: 300 EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAA 245
++ G+ + +I+ + G E + ++ + + G ++ EKL+ R N
Sbjct: 360 ALKWGKTVHSHILNA--GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 417
Query: 246 IWG 248
I G
Sbjct: 418 IGG 420
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 228/340 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NTMV+G + G ++ A +F+ M + +SWT LI G+ + + +EAI FR M +++V
Sbjct: 141 YNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSV 200
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++A +SACA++GA+ LG W+H + + GL V + N+LIDMYA+ G++ A Q
Sbjct: 201 EPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQ 260
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +++ ++V++W +MI GLA +GL EA+++F M R KP+ +T +L+AC H GL
Sbjct: 261 VFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGL 320
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G RY+++M + YGI ++E YGC++DLLGRAG L EA ++ MP N + G+LL
Sbjct: 321 TEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALL 380
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GD+++ E +QHL +L+P NY +LSNIYA +G+W+ +GK+R +M+ GVKK
Sbjct: 381 AGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKK 440
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PG S +E+ VHEFV+ D SHP + + Q+L + +M
Sbjct: 441 RPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEM 480
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 38 KNVISWTTLIAGYA-QMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGE 95
++V+SWT+ IA A Q D A +L + P+++ +L LSACA + L
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLAR 89
Query: 96 WIHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 151
+ + L + P L+ L Y S ALQ+F+ M +SV+T+ TM++GL
Sbjct: 90 PLALTLHARALK-LFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGL 148
Query: 152 ALHGL-----------------------------GR--EALDMFSRMERARVKPNEITFI 180
+GL GR EA+D F M V+P+ +T I
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLI 208
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
A++SAC VG + LG + + + R G+E + +ID+ R G ++ A ++
Sbjct: 209 AVVSACAEVGALGLG-MWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVF 262
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 217/336 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ Y K G A+ +F+ + ++++SWT +I G Q D P +++ LF M+ +
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + + LSACA LG ++ G W+H YI Q G+ + + A++DMYAK G I AL++
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M ++ TW ++ GLA+HGL EAL++F M + VKPNEITF+AIL+ACCH GLV
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR+YF+ M Y + PK+E YGCMIDL RAG L+EA +L R MP + + IWG LL
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLN 480
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A G++EL ++++L+ +SG + +LSNI AI RW+ ++R++M+D GV+K
Sbjct: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PG S IEV + HEFV GD SH + +Y++L IN
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLIN 576
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 139/250 (55%), Gaps = 8/250 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y GD + A +F+ M ++V+SW +LI+G+ + +EAI++F RM VE
Sbjct: 144 NSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMDVE--- 200
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P +++ L+ACA+ G + G+ IH IE+ + +N + L NA++DMY K+G +A
Sbjct: 201 PSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLV--LGNAMLDMYVKNGCFYEAKN 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + + +++WT MI GL +++L++FS M + P+ I ++LSAC +G
Sbjct: 259 IFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGT 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G + R GI+ I ++D+ + G ++ A K+ M + N W +LL
Sbjct: 319 LDFGTWVHEYINQR-GIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMS-QRNTFTWNALL 376
Query: 252 AASNIYGDVE 261
++G V
Sbjct: 377 CGLAMHGLVH 386
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
+ +LI GY + P A++++RRM + PD L AC+ G +H +
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ GL + N+LI Y G A +VF+ M + V++W ++I+G G EA+
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+F RM+ V+P+ T +++L+AC G + G+ +++ R+ + + M+D+
Sbjct: 193 VFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AMLDMY 247
Query: 223 GRAGYLQEAEKLLRRMP 239
+ G EA+ + +P
Sbjct: 248 VKNGCFYEAKNIFDELP 264
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 33/139 (23%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ G A G + +EA+ LF M + V
Sbjct: 372 WNALLCGLAMHGLV-------------------------------HEALNLFEVMIISGV 400
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP+EI LA L+AC G V+ G ++ N + Y L + +ID++ ++G + +A+
Sbjct: 401 KPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAV 460
Query: 131 QVFENMKNK-SVITWTTMI 148
++ M K V+ W ++
Sbjct: 461 ELARTMPMKPDVLIWGLLL 479
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WNT++ GYA +GD+ +F+ M E+NV SW LI GYAQ + +E + F+RM E +
Sbjct: 124 WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
V P++ M LSACA+LGA + G+W+H Y E G N + V + NALIDMY K G I A
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++VF+ +K + +I+W TMI GLA HG G EAL++F M+ + + P+++TF+ +L AC H+
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YFN M + + I P+IE GC++DLL RAG+L +A + + +MP +A+A IW +
Sbjct: 304 GLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 363
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS +Y V++GE AL+ LIKLEP N N+ +LSNIY GR++++ +++ MRD G
Sbjct: 364 LLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGF 423
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK G S+IE + +F + HP + L +IL
Sbjct: 424 KKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL 458
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 40/227 (17%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +M+ GY DL +AR F+L E++++ W T+I+GY +M EA +LF +M +
Sbjct: 61 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRD 120
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V W N +++ YA G +
Sbjct: 121 VMS----------------------W-----------------NTVLEGYANIGDMEACE 141
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHV 189
+VF++M ++V +W +I G A +G E L F RM + V PN+ T +LSAC +
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
G + G+ ++ + + +ID+ G+ G ++ A ++ +
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WNT++ GYA +GD+ +F+ M E+NV SW LI GYAQ + +E + F+RM E +
Sbjct: 71 WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 130
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
V P++ M LSACA+LGA + G+W+H Y E G N + V + NALIDMY K G I A
Sbjct: 131 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 190
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++VF+ +K + +I+W TMI GLA HG G EAL++F M+ + + P+++TF+ +L AC H+
Sbjct: 191 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 250
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YFN M + + I P+IE GC++DLL RAG+L +A + + +MP +A+A IW +
Sbjct: 251 GLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 310
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS +Y V++GE AL+ LIKLEP N N+ +LSNIY GR++++ +++ MRD G
Sbjct: 311 LLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGF 370
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK G S+IE + +F + HP + L +IL
Sbjct: 371 KKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL 405
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 40/227 (17%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +M+ GY DL +AR F+L E++++ W T+I+GY +M EA +LF +M +
Sbjct: 8 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRD 67
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V W N +++ YA G +
Sbjct: 68 VM----------------------SW-----------------NTVLEGYANIGDMEACE 88
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHV 189
+VF++M ++V +W +I G A +G E L F RM + V PN+ T +LSAC +
Sbjct: 89 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 148
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
G + G+ ++ + + +ID+ G+ G ++ A ++ +
Sbjct: 149 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 195
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 214/334 (64%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G++ A LF+ ++ K+VISW TLI GY M+ EA+ LF+ M
Sbjct: 232 KIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 291
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I
Sbjct: 292 GETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 351
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M +KS+ +W MI G A+HG + D+FSRM + ++P++ITF+ +LSAC
Sbjct: 352 AAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS 411
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M E + IW
Sbjct: 412 HSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIW 471
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++G+VEL E Q+LIK+EP N +Y +LSNIYA GRW + +IR ++
Sbjct: 472 CSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGK 531
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
+KK+PGCS IEV V EFV GD HP +Y
Sbjct: 532 CMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 156/277 (56%), Gaps = 4/277 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA GD+ +A+ LF+ + K+V+SW +I+GYA+ EA+ LF M NV
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE + LSACA G++ELG +H++++ +G ++ + + NALID+Y+K G++ A
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + K VI+W T+I G L +EAL +F M R+ PN++T +++L AC H+G
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K G+ +ID+ + G ++ A ++ M + + W ++
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAM 371
Query: 251 LAASNIYG--DVELGECALQHLIKLEPHNSGNYAILS 285
+ ++G D + I +EP + +LS
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 33/260 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A ++FE + E N + W T+I G+A P ++TL+ M + P+ L +
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------------------- 119
CA+ G+ IH + + G + + ++ +LI M
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 120 ------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
YA G I A ++F+ + K V++W MI+G A G +EAL++F M + V+
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+E T++ +LSAC H G +ELGR+ + + +G + ++ +IDL + G ++ A
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDD-HGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + + ++ + W +L+
Sbjct: 253 LFQGLSYK-DVISWNTLIGG 271
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 233/350 (66%), Gaps = 6/350 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
WN M++ Y +VG+L++AR LF M +NV++W ++IAGYAQ Q AI LF+ M +
Sbjct: 330 WNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 389
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PDE+ M++ +SAC LGA+ELG W+ ++ + + + +NA+I MY++ G + A
Sbjct: 390 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 449
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M + V+++ T+I+G A HG G EA+++ S M+ ++P+ +TFI +L+AC H G
Sbjct: 450 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 509
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E GR+ F +K +P I+ Y CM+DLLGR G L++A++ + RMP E +A ++GSL
Sbjct: 510 LLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 564
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L AS I+ VELGE A L +LEP NSGN+ +LSNIYA GRW + +IR+ M+ GVK
Sbjct: 565 LNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVK 624
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
K G S++E ++H+F+ D SH D +YQ+L ++ +M+ A ++ ++
Sbjct: 625 KTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 674
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 34/260 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W MV GYAKV DL AR F+ M E++V+SW +++GYAQ E + LF M +
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGI 256
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE + +SAC+ G L + + Q + + AL+DMYAK G IG A +
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARR 316
Query: 132 VFE--------------------------------NMKNKSVITWTTMIAGLALHGLGRE 159
+F+ M ++V+TW +MIAG A +G
Sbjct: 317 IFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAM 376
Query: 160 ALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
A+++F M A ++ P+E+T ++++SAC H+G +ELG + I+ I + M
Sbjct: 377 AIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKLSISGHNAM 435
Query: 219 IDLLGRAGYLQEAEKLLRRM 238
I + R G +++A+++ + M
Sbjct: 436 IFMYSRCGSMEDAKRVFQEM 455
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 23/287 (8%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
LF NV +T+++ Y+ + + + +F MQ V+PD + + G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGG- 114
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--KSVITWTTMI 148
+G H ++ + G + + NA+IDMYA+ G IG A +VF+ + + + V W M+
Sbjct: 115 --IG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+G +A +F M + N IT+ A+++ V +E RRYF+ M R
Sbjct: 171 SGYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYAKVKDLEAARRYFDCMPER--- 223
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGEC 265
+ + M+ + G +E +L M E + W ++++A + GD L
Sbjct: 224 --SVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281
Query: 266 ALQHLIKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ L + + N L ++YA G G R++ ++G +
Sbjct: 282 LVRTLHQKQIQLNCFVRTALLDMYAKCG---SIGAARRIFDELGAYR 325
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 214/334 (64%), Gaps = 2/334 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ Y+K G + A LFE ++ K+V+SW TLI GY M+ EA+ LF+ M
Sbjct: 234 KIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIG 127
P+++ +++ L ACA LGA+++G WIH YI++ + L +LIDMYAK G I
Sbjct: 294 GESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIE 353
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A QVF +M +KS+ +W MI G A+HG D+FSRM + ++P++ITF+ +LSAC
Sbjct: 354 AAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS 413
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G ++LGR F M Y I PK+E YGCMIDLLG +G +EA+++++ MP E + IW
Sbjct: 414 HSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIW 473
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A +G++EL E ++L+K+EP N G+Y +LSNIYA G W+E K+R ++
Sbjct: 474 CSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGK 533
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 534 GMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 147/253 (58%), Gaps = 2/253 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GYA G++ +A+ +F+ + K+V+SW +I+GYA+ EA+ LF+ M NV
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE M+ LSACAQ +VELG +H++I+ +G + + + NALID+Y+K G++ A
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + K V++W T+I G L +EAL +F M R+ PN++T ++IL AC H+G
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++GR + I K + +ID+ + G ++ A ++ M + + W ++
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAM 373
Query: 251 LAASNIYGDVELG 263
+ ++G G
Sbjct: 374 IFGFAMHGRANAG 386
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 33/257 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F + E N + W T++ GYA P A+ L+ M + P+ L +CA+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE------------- 134
A E G+ IH ++ + G + ++ +LI MYA++G++ A +VF+
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 135 --------NMKN----------KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
N+++ K V++W MI+G A G +EAL++F M + V+P+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T + +LSAC VELGR+ + + +G ++ +IDL + G ++ A L
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDD-HGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 237 RMPFEANAAIWGSLLAA 253
+ + + W +L+
Sbjct: 258 GLSCK-DVVSWNTLIGG 273
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 224/347 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV+GY+K G L++AR +F+ K+++ WTT+I+ YA+ D P EA+ +F M +K
Sbjct: 285 TAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIK 344
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ML+ +SAC LG ++ +W+H Y GL +++P++NALI+MYAK G + A V
Sbjct: 345 PDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDV 404
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M ++V++W++MI A+HG ++L +F++M++ V+PNE+TF+ +L C H GLV
Sbjct: 405 FEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLV 464
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G++ F M Y I PKIE YGCM+DL GRA L+EA +++ MP N IWGSL++
Sbjct: 465 EEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMS 524
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G++ELGE A + ++KLEP + G ++SNIYA RW+ IR +M V K
Sbjct: 525 ACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKE 584
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S I+++ + HEF+ GD H + +Y L ++ ++K A ++ +
Sbjct: 585 KGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPD 631
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 40/293 (13%)
Query: 2 FTLSRLLYKFWNT-MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
F ++ L F T ++ YA G +N AR +F+ M++++V++W T+I Y + +EA
Sbjct: 141 FKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAF 200
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LF M+ NV PDE+ + +SAC + G + I++++ + + L AL+ MY
Sbjct: 201 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMY 260
Query: 121 A-------------------------------KSGKIGKALQVFENMKNKSVITWTTMIA 149
A K+G++ A +F+ + K ++ WTTMI+
Sbjct: 261 AGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMIS 320
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR---RYFNIMKSRY 206
A +EAL +F M + +KP+ +T ++++SAC ++G ++ + RY ++
Sbjct: 321 AYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHL----N 376
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
G+E + +I++ + G L A + +MP N W S++ A ++G+
Sbjct: 377 GLESVLPIDNALINMYAKCGGLDAARDVFEKMP-TRNVVSWSSMINAFAMHGE 428
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
I + +L+ ++ +P I ++R++ + D I+ L A +++ A+ G +H +
Sbjct: 80 IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ + + L+DMYA G+I A VF+ M + V+TW TMI GL EA
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F M+ + V P+E+ I+SAC G + R ++ + + ++
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEN-DVRMDTHLLTALVT 258
Query: 221 LLGRAGYLQEAEKLLRRM 238
+ AG + A + R+M
Sbjct: 259 MYAGAGCMDMAMEFFRKM 276
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 208/311 (66%), Gaps = 10/311 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V+G+ K ++ AR +F+ M E++V SW+T+I+GYAQ DQ A+ LF +M +
Sbjct: 602 WNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGI 661
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIG 127
KP+E+ M++ SA A LG ++ G W H YI N +PLN+ ALIDMYAK G I
Sbjct: 662 KPNEVTMVSVFSAIATLGTLKEGRWAHEYI----CNESIPLNDNLRAALIDMYAKCGSIN 717
Query: 128 KALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
ALQ F +++K SV W +I GLA HG LD+FS M+R +KPN ITFI +LSA
Sbjct: 718 SALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSA 777
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
CCH GLVE GRR F IMKS Y +EP I+ YGCM+DLLGRAG L+EAE+++R MP +A+
Sbjct: 778 CCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIV 837
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IWG+LLAA +GDV +GE A + L L P + G +LSNIYA GRW + +R+ ++
Sbjct: 838 IWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQ 897
Query: 306 DMGVKKMPGCS 316
+ +++MPGCS
Sbjct: 898 NQRMERMPGCS 908
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 31/216 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAK G ++ AR LFE + +K+VISW T+I GY M++ +EA+ ++R M +
Sbjct: 470 WNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGL 529
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-------TIVPLN----------- 113
+EI ++ +SAC +L A+ G +H + + G + TI+
Sbjct: 530 ALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACL 589
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
NAL+ + K+ + +A ++F++M + V +W+TMI+G A R A
Sbjct: 590 QFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIA 649
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
L++F +M + +KPNE+T +++ SA +G ++ GR
Sbjct: 650 LELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGR 685
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 31/205 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N MV GYAK G L+NAR LF++M +K +S+TT+I G Q + EA+ +F+ M+ + V
Sbjct: 339 NIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVV 398
Query: 73 PDEIAMLAALSACAQLGAVELGEWIH----------------NYIEQYGLNTIV------ 110
P+++ ++ + AC+ G + IH N + Y L + V
Sbjct: 399 PNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRL 458
Query: 111 -----PLN----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+N N +++ YAK+G + A ++FE + +K VI+W TMI G L EAL
Sbjct: 459 FDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEAL 518
Query: 162 DMFSRMERARVKPNEITFIAILSAC 186
M+ M R+ + NEI + ++SAC
Sbjct: 519 VMYRAMLRSGLALNEILVVNLVSAC 543
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHN 99
+S+++ + P I +F ++ +N E+A+++AL C+ + G +H+
Sbjct: 237 VSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCS---SSSQGRQLHS 293
Query: 100 YIEQYGLNTIVPLNNALIDMYAK-------------------------------SGKIGK 128
+ + GL++ + N+LI+MYAK +G++
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A ++F+ M +K +++TTMI GL + REAL++F M V PN++T + ++ AC H
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSH 413
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + L R + + + +E + ++ + EA +L RMP E N W
Sbjct: 414 FGEI-LNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMP-EVNLVSWN 471
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L N Y L + A + ++ + ++ + + Y ++ R +E+ + + M G
Sbjct: 472 VML---NGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSG 528
Query: 309 V 309
+
Sbjct: 529 L 529
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 231/358 (64%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ G L +AR +F+ M +++ ++W+ +I GY + ++A+ LFR MQ
Sbjct: 166 NTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANG 225
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+ DE+ ++ L+A LGA+EL W+ ++E+ G+ V L NALID AK G + A+
Sbjct: 226 VQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAV 285
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ +SV++WT++I LA+ G G+EA+ +F M+ A V P+++ FI +L+AC H G
Sbjct: 286 AVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAG 345
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ G YF+ MK YGIEPKIE YGCM+D+ GRAG ++ A + +R MP + N IW SL
Sbjct: 346 MVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSL 405
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
++A +G +ELGE + L+ P + NY +LSN++A+ RW E +IR+ M G+K
Sbjct: 406 VSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIK 465
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PGCS +E+ VHEF+AGD SHP + +Y+++ ++ +++ H+ +L+ D
Sbjct: 466 KVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLD 523
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVELGRRY------FNIMKSR 205
+H L A F M R V PN+ TF +L AC + G ++G + F +
Sbjct: 103 IHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQ 162
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
Y I Y C G+L +A + RMP E +A W +++
Sbjct: 163 YVSNTLIHMYSCF-----GGGFLGDARNVFDRMPKE-SAVTWSAMI 202
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 219/334 (65%), Gaps = 3/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
W TM+ GY + D++ AR LF+ M E+N++SW T+I GY Q QP E I LF+ MQ +
Sbjct: 210 WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS 269
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD++ +L+ L A + GA+ LGEW H ++++ L+ V + A++DMY+K G+I KA
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K V +W MI G AL+G R ALD+F M KP+EIT +A+++AC H G
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGG 388
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR++F++M+ G+ KIE YGCM+DLLGRAG L+EAE L+ MPFE N I S
Sbjct: 389 LVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF 447
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A Y D+E E L+ ++LEP N GNY +L N+YA RW++ G ++ VMR K
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAK 507
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K GCS IE++ V EF++GDT+HP ++ +L
Sbjct: 508 KEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 27/332 (8%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F +V + VG + AR LF+ +++ ++I Y + Q ++ L+R ++ E
Sbjct: 13 FTKFLVISASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE 71
Query: 70 NV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +C+ V G +H+ I ++G + ++ ++DMYAK GK+G
Sbjct: 72 TCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGC 131
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A F+ M ++S ++WT +I+G G A +F +M + + + + A++
Sbjct: 132 ARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVK 188
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + RR F+ M + I + MI + A KL MP E N W
Sbjct: 189 SGDMTSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWN 242
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI-------LGRWNESGKIR 301
+++ + G Q + + + ILS + AI LG W R
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 302 KVMRDMGVKKMPG-------CSYIEVSKRVHE 326
K + D VK C IE +KR+ +
Sbjct: 303 KKL-DKKVKVCTAILDMYSKCGEIEKAKRIFD 333
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 218/337 (64%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+ YAK GDL NA LF+ + +NV+SW+ ++A Y+ + P+EAI +F M V
Sbjct: 302 WTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGV 361
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P + +++ LSACAQL ++++G W+++ YI + + L+NA IDM+AK G +G A
Sbjct: 362 EPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAAS 421
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F NM++K+V++W TMI LHG EAL +F + + P+E T+I +LSAC H G
Sbjct: 422 RLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGG 481
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR +F MK YGIEP+ E Y CMIDLLG+ G LQEA ++ R MP A+ A WG+L
Sbjct: 482 LVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGAL 541
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++G+VE+G+CA L L+P +SG Y ++S IYA +W + +R VMRD VK
Sbjct: 542 LNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVK 601
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K PGCS IEV + HEF+ D SH + +Y L I
Sbjct: 602 KNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 33/281 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
N +V Y L +AR LF+ M +++V+SWTTLI GYA+ P+EA +F RM V E+V
Sbjct: 170 NALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESV 229
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ ++AA SA Q+G + LG +H I + G V L NAL+DM+ K G + A +
Sbjct: 230 WPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKE 289
Query: 132 VFENM-------------------------------KNKSVITWTTMIAGLALHGLGREA 160
VF+ M N++V++W+ M+A + + EA
Sbjct: 290 VFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEA 349
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F+ M A V+P + T +++LSAC + +++G ++ + +E ID
Sbjct: 350 IRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFID 409
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G + A +L M + N W +++ A ++G E
Sbjct: 410 MFAKCGDVGAASRLFSNME-DKNVVSWNTMIMAHGLHGQPE 449
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 7/240 (2%)
Query: 25 LNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
L +A A+ TE N T++ G+ + +P A+TLFRR+ + + D ++ A+
Sbjct: 81 LAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVK 140
Query: 84 ACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
A A + E IH + G + V NAL+ MY S + A ++F+ M ++ V+
Sbjct: 141 AAATSSSPT--EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVV 198
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNI 201
+WTT+I G A GL EA +F RM A V PNE+T +A SA +GL+ LGR
Sbjct: 199 SWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQC 258
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + ++D+ G+ G + A+++ MP + + W S+++A GD+E
Sbjct: 259 IVESGG-RMSVNLENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLE 316
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 223/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMVA YA+VG ++ A +FE M EKN++SW +LI+G Q +A+ F M E
Sbjct: 391 WNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQ 450
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ LS+CA L A+++G+ +H + + G T + ++NALI MYAK G I A
Sbjct: 451 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAEL 510
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ + V++W ++IA AL+G GREAL +F +ME V P+E+TF+ ILSAC HVGL
Sbjct: 511 LFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGL 570
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G + F M Y IEP E Y CM+DLLGRAG L+EA +L+R M ANA IWG+LL
Sbjct: 571 IDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL 630
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G++EL + A + L++ EPH + NY +LSN+ A GRW+E ++R++M++ G +K
Sbjct: 631 GACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEK 690
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IE+ RVH F++ D +HP L IL + M+
Sbjct: 691 QPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMR 731
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 140/294 (47%), Gaps = 24/294 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M++ +AK G +++AR LF+ M ++N++SW ++IA Y D+ EA LF +M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR--- 106
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + ++ + G + + N + Y N + NA++ YAK+ + +A ++
Sbjct: 107 -DLYSWTLMITCYTRNGELAKARNLFNLLP-YKWNPVCC--NAMVAGYAKNRQFDEARRL 162
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K +++W +M+ G +G R L F M V +++ ++ VG +
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDL 218
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+F + + P + M+ R G + EA +L +MP N W +++A
Sbjct: 219 NSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIA 272
Query: 253 A--SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
A N + D A+ +++ NS ++ + N Y +G+ +E+ ++ M
Sbjct: 273 AYVQNCHVDE-----AISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQM 321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 32/253 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV G+ +VGDLN++ FE + N +SW T++ G+A+ + EA LF +M + NV
Sbjct: 205 WNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNV 264
Query: 72 KPDEIAMLAALSACAQLGAVELG---------EW---IHNYI------EQYGLNTIVPLN 113
+ A + C A+ L W I+ Y+ E L +P
Sbjct: 265 VAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYR 324
Query: 114 N-----ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
N A+I Y ++ ++ A Q+F + + V+ W TMIAG + G EAL +F +M
Sbjct: 325 NVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM- 383
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
VK + +++ ++++ VG ++ + F MK E I + +I L + G
Sbjct: 384 ---VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK-----EKNIVSWNSLISGLTQNGSY 435
Query: 229 QEAEKLLRRMPFE 241
+A K M E
Sbjct: 436 LDALKSFMLMGHE 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 146/330 (44%), Gaps = 36/330 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY + G++ FE M E++V+SW ++ G+ ++ N + F ++
Sbjct: 174 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP---- 229
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ ++ + L A+ G + +Q + +V NA+I Y ++ + +A+
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEAR---RLFDQMPIRNVVAW-NAMIAAYVQNCHVDEAIS 285
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K+ I+WTT+I G G EA + ++M V A++S
Sbjct: 286 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ----TAMISGYVQNKR 341
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ R+ FN + R + + MI + G + EA L ++M + + W +++
Sbjct: 342 MDDARQIFNQISIR-----DVVCWNTMIAGYSQCGRMDEALHLFKQM-VKKDIVSWNTMV 395
Query: 252 AASNIYGDVELGECALQHLIKLEPHN-------------SGNYAILSNIYAILGRWNESG 298
A+ Y V + A++ +++ N +G+Y + ++G +E
Sbjct: 396 AS---YAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMG--HEGQ 450
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 328
K + G+ + ++V K++H+ V
Sbjct: 451 KPDQSTFACGLSSCAHLAALQVGKQLHQLV 480
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+A Y + AR LF+ M +++ SWT +I Y + + +A LF + +
Sbjct: 80 WNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWN 139
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
AM+A + Q + +V N+ L Y ++G++ LQ
Sbjct: 140 PVCCNAMVAGYAKNRQFDEAR------RLFDAMPAKDLVSWNSMLTG-YTRNGEMRLGLQ 192
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M + V++W M+ G G + + F ++ PN ++++ +L G
Sbjct: 193 FFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWVTMLCGFARFGK 248
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ RR F+ M R + + MI + ++ EA L MP E N+ W ++
Sbjct: 249 IAEARRLFDQMPIR-----NVVAWNAMIAAYVQNCHVDEAISLFMEMP-EKNSISWTTV- 301
Query: 252 AASNIYGDVELGE 264
I G V +G+
Sbjct: 302 ----INGYVRMGK 310
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+N I KSG+I +A++VF++M +K+ +T +MI+ A +G +A +F M + +
Sbjct: 18 HNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI 77
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+++ ++++A H VE R+ F+ M +R + + MI R G L +A
Sbjct: 78 ----VSWNSMIAAYLHNDRVEEARQLFDKMPTR-----DLYSWTLMITCYTRNGELAKAR 128
Query: 233 KLLRRMPFEANAAIWGSLLA 252
L +P++ N +++A
Sbjct: 129 NLFNLLPYKWNPVCCNAMVA 148
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 86 AQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
QLG + ++ E I + NT+ +N++I +AK+G+I A Q+F+ M +++++W
Sbjct: 23 TQLGKSGQIDEAIKVFQHMTHKNTVT--HNSMISAFAKNGRISDARQLFDGMPQRNIVSW 80
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV--GLVELGRRYFNIM 202
+MIA + EA +F +M P + L C+ G + R FN++
Sbjct: 81 NSMIAAYLHNDRVEEARQLFDKM------PTRDLYSWTLMITCYTRNGELAKARNLFNLL 134
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
Y P M+ + EA +L MP + + W S+L G++ L
Sbjct: 135 P--YKWNPVC--CNAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRL 189
Query: 263 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 297
G LQ ++ + ++ ++ + + +G N S
Sbjct: 190 G---LQFFEEMAERDVVSWNLMVDGFVEVGDLNSS 221
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 231/358 (64%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ G L +AR +F+ M +++ ++W+ +I GY + ++A+ LFR MQ
Sbjct: 166 NTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANG 225
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+ DE+ ++ L+A LGA+EL W+ ++E+ G+ V L NALID AK G + A+
Sbjct: 226 VQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAV 285
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ +SV++WT++I LA+ G G+EA+ +F M+ A V P+++ FI +L+AC H G
Sbjct: 286 AVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAG 345
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ G YF+ MK YGIEPKIE YGCM+D+ GRAG ++ A + +R MP + N IW SL
Sbjct: 346 MVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSL 405
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
++A +G +ELGE + L+ P + NY +LSN++A+ RW E +IR+ M G+K
Sbjct: 406 VSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIK 465
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PGCS +E+ VHEF+AGD SHP + +Y+++ ++ +++ H+ +L+ D
Sbjct: 466 KVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLD 523
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVELGRRY------FNIMKSR 205
+H L A F M R V PN+ TF +L AC + G ++G + F +
Sbjct: 103 IHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQ 162
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
Y I Y C G+L +A + RMP E +A W +++
Sbjct: 163 YVSNTLIHMYSCF-----GGGFLGDARNVFDRMPKE-SAVTWSAMI 202
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 218/337 (64%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+ YAK GDL NA LF+ + +NV+SW+ ++A Y+ + P+EAI +F M V
Sbjct: 302 WTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGV 361
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P + +++ LSACAQL ++++G W+++ YI + + L+NA IDM+AK G +G A
Sbjct: 362 EPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAAS 421
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F NM++K+V++W TMI LHG EAL +F + + P+E T+I +LSAC H G
Sbjct: 422 RLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGG 481
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR +F MK YGIEP+ E Y CMIDLLG+ G LQEA ++ R MP A+ A WG+L
Sbjct: 482 LVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGAL 541
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++G+VE+G+CA L L+P +SG Y ++S IYA +W + +R VMRD VK
Sbjct: 542 LNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVK 601
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K PGCS IEV + HEF+ D SH + +Y L I
Sbjct: 602 KNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 33/281 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
N +V Y L +AR LF+ M +++V+SWTTLI GYA+ P+EA +F RM V E+V
Sbjct: 170 NALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESV 229
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ ++AA SA Q+G + LG +H I + G V L NAL+DM+ K G + A +
Sbjct: 230 WPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKE 289
Query: 132 VFENM-------------------------------KNKSVITWTTMIAGLALHGLGREA 160
VF+ M N++V++W+ M+A + + EA
Sbjct: 290 VFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEA 349
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F+ M A V+P + T +++LSAC + +++G ++ + +E ID
Sbjct: 350 IRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFID 409
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G + A +L M + N W +++ A ++G E
Sbjct: 410 MFAKCGDVGAASRLFSNME-DKNVVSWNTMIMAHGLHGQPE 449
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 7/240 (2%)
Query: 25 LNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
L +A A+ TE N T++ G+ + +P A+TLFRR+ + + D ++ A+
Sbjct: 81 LAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVK 140
Query: 84 ACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
A A + E IH + G + V NAL+ MY S + A ++F+ M ++ V+
Sbjct: 141 AAATSSSPT--EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVV 198
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNI 201
+WTT+I G A GL EA +F RM A V PNE+T +A SA +GL+ LGR
Sbjct: 199 SWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQC 258
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + ++D+ G+ G + A+++ MP + + W S+++A GD+E
Sbjct: 259 IVESGG-RMSVNLENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLE 316
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 226/333 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ G AK G+++ +R LF+ M +N +SW ++I+GY + + EA+ LF +MQ E +
Sbjct: 194 WNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERI 253
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP E M++ L+A A+LGA++ GEWIH+YI + V + ++IDMY K G IG+A Q
Sbjct: 254 KPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQ 313
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE K + +W TMI GLA++G EA+ +FSR+E + ++P+++TF+ +L+AC + GL
Sbjct: 314 VFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGL 373
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ + YF++M Y IEP I+ Y CM+D LGRAG L+EAE+L+R MP +A IW SLL
Sbjct: 374 VDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLL 433
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +G+VEL + A +H++ L+ ++S Y +LSNIYA ++ E+ + R M++ ++K
Sbjct: 434 SACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEK 493
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV+ +HEFVAG HP +Y +L
Sbjct: 494 EPGCSLIEVNGEIHEFVAGGRLHPQAQEVYSLL 526
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 34/261 (13%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAA 81
GD+N A +F + N+ SW T+I G++Q P+ AI+LF M V +V+P + +
Sbjct: 72 GDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSV 131
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
A AQLG G +H + + GL + N +I MYA G + + + F + +
Sbjct: 132 FKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDI 191
Query: 142 ITWTTMIAGLA-------------------------------LHGLGREALDMFSRMERA 170
+ W +MI GLA +G REALD+F +M+
Sbjct: 192 VAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEE 251
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
R+KP+E T +++L+A +G ++ G + ++ + E + +ID+ + G + E
Sbjct: 252 RIKPSEFTMVSLLNASARLGALKQGEWIHDYIR-KNNFELNVIVTASIIDMYCKCGSIGE 310
Query: 231 AEKLLRRMPFEANAAIWGSLL 251
A ++ P + ++ W +++
Sbjct: 311 AFQVFEMAPLKGLSS-WNTMI 330
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 224/344 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y+K G ++A +F M +N++SW LIAGY Q ++ EA+ +F+ M +E ++
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIE 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + +AL+ACAQLG+++ G W+H Y+++ L L AL+DMY+K G + +AL V
Sbjct: 304 PNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K V WT MI GLA+ G +L++FS+M R+RV+PN +TF+ +LSAC H GLV
Sbjct: 364 FEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G F +M Y +EP ++ YGCM+DLLGRAG L+EA K + MP E +WG+L +
Sbjct: 424 DEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFS 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ ELGE HLIKL+PH+SG Y +L+N+Y+ +W + +R++M+ GV K
Sbjct: 484 GCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKS 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
P CS+IEV+ +HEF+A D SH + +Y +L + Q+K A +
Sbjct: 544 PACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATY 587
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 5/249 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V+ +A G ++ +R LF +K+V+SWT LI G + + EA+ F M+ V+
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+ +++ L A A L V G W+H Y+E + V + +AL+DMY+K G A++
Sbjct: 202 VDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M +++++W +IAG +EAL +F M ++PN+ T + L+AC +G
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321
Query: 192 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ GR + +S+ G+ K+ ++D+ + G + EA + ++P + W ++
Sbjct: 322 LDQGRWLHEYVDRSKLGLNSKLGT--ALVDMYSKCGCVDEALLVFEKLP-AKDVYPWTAM 378
Query: 251 LAASNIYGD 259
+ + GD
Sbjct: 379 INGLAMRGD 387
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
DL LF+ + + W T++ ++ QP + + R++ V PD L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A ++L E + +I ++GL+ + N+L+ +A G + + ++F K V++
Sbjct: 113 AFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVS 171
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
WT +I G +G EAL+ F M + V+ +E+T +++L A + V GR
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + ++D+ + GY +A K+ MP N WG+L+A
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP-TRNLVSWGALIAG 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y+K G ++ A +FE + K+V WT +I G A ++ LF +M
Sbjct: 342 KLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRS 401
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V+P+ + L LSACA G V+ G E I Y L V ++D+ ++G++ +
Sbjct: 402 RVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEE 461
Query: 129 ALQVFENMKNKSVI-TWTTMIAGLALH 154
A++ E+M + W + +G +H
Sbjct: 462 AIKFIESMPMEPTPGVWGALFSGCMIH 488
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 216/328 (65%), Gaps = 2/328 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GY VG L AR +F KNV+SW +I GY+ + +E + LF MQ V
Sbjct: 208 WNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV 267
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +++ LSACA +GA+ GEW+H YI++ G++ + AL+DMY+K G I KAL+
Sbjct: 268 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 327
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + K + TW ++I+GL+ HG G+ AL +FS M KPNE+TF+ +LSAC GL
Sbjct: 328 VFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGL 387
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GR FN+M +GI+P IE YGCM+DLLGR G L+EAE+L+++MP + + +W SLL
Sbjct: 388 LDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLL 447
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G+VEL E Q L++L P S ++ LSN+YA +GRW + ++R+ MR GV+K
Sbjct: 448 GACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRK 507
Query: 312 MPGCSYIEVSKRVHEFVAGD--TSHPDF 337
PGCS IEV V+EF+AG+ S DF
Sbjct: 508 DPGCSMIEVDGTVYEFLAGEGLVSGKDF 535
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F + N W T+I YA P A+T+F +M +V PD+ AL +C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
VE G IH ++ + GL + + N LI +YA G I A + + M + V++W +
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
++ A GL A +F M V+ ++ ++S VGL+E RR F +
Sbjct: 181 LSAYAERGLMELACHLFDEMTERNVE----SWNFMISGYVGVGLLEEARRVFGETPVK-- 234
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ + MI AG E L M
Sbjct: 235 ---NVVSWNAMITGYSHAGRFSEVLVLFEDM 262
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G + +AR L + M E++V+SW L++ YA+ A LF M NV+
Sbjct: 147 NTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVE 206
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
W N +I Y G + +A +V
Sbjct: 207 ----------------------SW-----------------NFMISGYVGVGLLEEARRV 227
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F K+V++W MI G + G E L +F M+ A VKP+ T +++LSAC HVG +
Sbjct: 228 FGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGAL 287
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + + + GI ++D+ + G +++A ++ + + W S+++
Sbjct: 288 SQG-EWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC-LRKDISTWNSIIS 345
Query: 253 ASNIYGDVELGECALQ 268
+ +G G+ ALQ
Sbjct: 346 GLSTHGS---GQHALQ 358
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 221/337 (65%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L AR LF M K+ +SW+T+I G+A EA FR +Q +
Sbjct: 206 WNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGM 265
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+++ ALSACA GA+E G+ +H +IE+ G +V +NNAL+D Y+K G +G A
Sbjct: 266 RPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARL 325
Query: 132 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M K S+++WT+MIAGLA+HG G EA+ +F ME + ++P+ I FI+IL AC H G
Sbjct: 326 VFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAG 385
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E G YF MK Y IEP IE YGCM+DL GRAG L +A + + MP A IW +L
Sbjct: 386 LIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTL 445
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +I+G+V+L E + L +L+P+NSG++ +LSNIYA+ G+W + +R+ M D +
Sbjct: 446 LGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMN 505
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K PG S IEV K ++ FVAG+ + + Y+ L +I
Sbjct: 506 KTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEI 542
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 20/293 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALS 83
L+ AR LF +V TLI G A+ D P ++ F M+ P D + L
Sbjct: 55 LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A A ++E G +H +GL+T + + L+ MY++ G + A +VFE M +V+
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++ G + A MF+RM N ++ +L+ G +EL R+ F M
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFR----NLTSWNVMLAGYTKAGELELARKLFLEMP 230
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIYGDV 260
+ + + MI G+ EA R + N L+A G +
Sbjct: 231 VKDDV-----SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAI 285
Query: 261 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
E G+ L I+ SG ++S A+L +++ G + M + ++MP
Sbjct: 286 EFGK-ILHGFIE----KSGFLWMVSVNNALLDTYSKCGNVG--MARLVFERMP 331
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 225/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ GYAK G + AR LF+ M EKN +SW+ +I GYAQ+ EA+ LF MQ+
Sbjct: 182 WTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGF 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ A++ AL+ACA LGA++ G WIH Y+++ + L ALIDMYAK G + A +
Sbjct: 242 RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACR 301
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++ V +T++I+GLA HG A++MF+RM+ V PNE+TFI +LSAC VGL
Sbjct: 302 VFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGL 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R F M + YGIEP ++ YGC++DLLGRAG L++A++++R MP E ++ + G+LL
Sbjct: 362 VEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALL 421
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDVELG+ ++ L + + G + +LSN+YA +W + K+RK M + VKK
Sbjct: 422 NACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKK 481
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PGCS IEV V EFVAGD SH D + +L I+ +K
Sbjct: 482 VPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLK 522
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 32/247 (12%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD+++A LF + + W T++ + +P ++L++ M P+ L
Sbjct: 61 GDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLL 120
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACAQL + G +H + G + N L+ +YA + A ++F+ N+ V+
Sbjct: 121 QACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVV 180
Query: 143 TWT-------------------------------TMIAGLALHGLGREALDMFSRMERAR 171
TWT MI G A GL REAL++F+ M+ A
Sbjct: 181 TWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAG 240
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+PN + L+AC +G ++ GR + + +I +ID+ + G ++ A
Sbjct: 241 FRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVETA 299
Query: 232 EKLLRRM 238
++ M
Sbjct: 300 CRVFDEM 306
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 229/344 (66%), Gaps = 2/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L A+ +F+ + EK+++SWT++I+G Q + P EA+ LF+ MQ ++
Sbjct: 171 NALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIE 230
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + + LSACA+LGA++ G W+H +I++ + + + A++DMYAK G I ++Q+
Sbjct: 231 PDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQI 290
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +K+V+TW ++ GLA+HG + L++F M R ++PNE+TF+AIL+ACCH GLV
Sbjct: 291 FNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLV 350
Query: 193 ELGRRYFNIMK-SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
GR+YFN MK +Y + P++E YGCM+DLL RA L EA +L + MP + I G+LL
Sbjct: 351 NEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALL 410
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A G+ EL + L ++L+ H+SG Y +LSNI+AI RW++ +IR++M++ G+KK
Sbjct: 411 SACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKK 470
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG + IE+ + HEF+ GDT HP D+ ++L KI F E
Sbjct: 471 PPGSTVIELDGKAHEFIVGDTRHPQ-DKRIRLLLKILSDQIFLE 513
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y+ +A +F+ M ++V+SWT +I+GY + +EA+ LF RM VE
Sbjct: 73 NSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVE--- 129
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L AC + G + +G+ IH + + ++NAL+DMY K G + A QV
Sbjct: 130 PNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQV 189
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +++WT++I+GL +EAL++F M+ + ++P+ I ++LSAC +G +
Sbjct: 190 FDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGAL 249
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+ + R I+ I+ M+D+ + G ++ + ++ MP + N W +LL
Sbjct: 250 DYG-RWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWNALLN 307
Query: 253 ASNIYG 258
++G
Sbjct: 308 GLAMHG 313
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 7/212 (3%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
+ L++GYA D+P A ++RR+ + PD A L +CA+ + G +H I
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ G + + N+L+ Y+ + G A +VF+ M + V++WT +I+G GL EA+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDL 221
+F RM+ V+PN TF+++L AC G + +G+ + KS +G+ +E ++D+
Sbjct: 122 LFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGV--GLEVSNALMDM 176
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ G L A+++ + E + W S+++
Sbjct: 177 YVKCGCLPGAKQVFDELA-EKDIVSWTSIISG 207
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 225/355 (63%), Gaps = 18/355 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN++V YAK G +++AR LF+ M E+NVISW+ LI GY + EA+ LFR MQ+
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 71 ----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
V+P+E M LSAC +LGA+E G+W+H YI++Y + + L ALIDMYAK G +
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 127 GKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILS 184
+A +VF + K V ++ MI LA++GL E +FS M + + PN +TF+ IL
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + MP E +
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E
Sbjct: 371 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME-------- 422
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G+ K+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++ +
Sbjct: 423 ---GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 474
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----- 109
Q + I+++ RM+ V PD L + + LG+ H I +GL+
Sbjct: 42 QRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRT 101
Query: 110 --------------------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
+P N++++ YAK+G I A ++F+ M ++VI+
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 144 WTTMIAGLALHGLGREALDMFSRME-----RARVKPNEITFIAILSACCHVGLVELGRRY 198
W+ +I G + G +EALD+F M+ A V+PNE T +LSAC +G +E G ++
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KW 220
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +Y +E I +ID+ + G L+ A+++ + + + + +++ +YG
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 225/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ GYAK G + AR LF+ M EKN +SW+ +I GYAQ+ EA+ LF MQ+
Sbjct: 157 WTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGF 216
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ A++ AL+ACA LGA++ G WIH Y+++ + L ALIDMYAK G + A +
Sbjct: 217 RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACR 276
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++ V +T++I+GLA HG A++MF+RM+ V PNE+TFI +LSAC VGL
Sbjct: 277 VFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGL 336
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R F M + YGIEP ++ YGC++DLLGRAG L++A++++R MP E ++ + G+LL
Sbjct: 337 VEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALL 396
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDVELG+ ++ L + + G + +LSN+YA +W + K+RK M + VKK
Sbjct: 397 NACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKK 456
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PGCS IEV V EFVAGD SH D + +L I+ +K
Sbjct: 457 VPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLK 497
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 32/247 (12%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD+++A LF + + W T++ + +P ++L++ M P+ L
Sbjct: 36 GDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLL 95
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACAQL + G +H + G + N L+ +YA + A ++F+ N+ V+
Sbjct: 96 QACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVV 155
Query: 143 TWT-------------------------------TMIAGLALHGLGREALDMFSRMERAR 171
TWT MI G A GL REAL++F+ M+ A
Sbjct: 156 TWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAG 215
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+PN + L+AC +G ++ GR + + +I +ID+ + G ++ A
Sbjct: 216 FRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVETA 274
Query: 232 EKLLRRM 238
++ M
Sbjct: 275 CRVFDEM 281
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 233/356 (65%), Gaps = 1/356 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y +++ AR +F+ + E V+++ +I GYA+ +PNEA++LFR +Q N+KP
Sbjct: 161 TLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKP 220
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ ML+ LS+CA LGA++LG+W+H Y+++ G N V ++ ALIDMYAK G + A+ VF
Sbjct: 221 TDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVF 280
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
ENM + W+ MI A+HG G +A+ +F M +A +P+EITF+ +L AC H GLVE
Sbjct: 281 ENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVE 340
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G YF M+ +YG+ P I+ YGCM+DLLGRAG L+EA + + +P +W +LL+A
Sbjct: 341 EGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSA 400
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+G+VELG+ ++ + +L+ + G+Y ILSN+ A GRW + +RK+M + GV K+P
Sbjct: 401 CGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIP 460
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
GCS +EV+ VHEF +GD H +L+Q L ++ ++K ++ N S V +D+
Sbjct: 461 GCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNT-SLVFHADM 515
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
+L KF N + + +A LF+ + + +++ + T+ GYA+ D P A TLF ++
Sbjct: 54 VLTKFIN-FCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQI 112
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ PD+ + L ACA A+E G +H + GL+ V + LI+MY ++
Sbjct: 113 LFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEM 172
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A +VF+ + V+T+ MI G A EAL +F ++ +KP ++T +++LS+C
Sbjct: 173 DCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSC 232
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+G ++LG+ +K + G ++ +ID+ + G L +A + M A
Sbjct: 233 ALLGALDLGKWMHEYVK-KNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQA- 290
Query: 247 WGSLLAASNIYG 258
W +++ A I+G
Sbjct: 291 WSAMIMAYAIHG 302
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 225/340 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y+ G +A +FE+M+ ++ ++W ++I G+A PNEA+TL+R M E V+
Sbjct: 175 NSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE 234
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ LSAC +LGA+ LGE +H Y+ + GL +NAL+D+Y+K G A +V
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ +SV++WT++I GLA++GLG EAL +F +ER +KP+EITF+ +L AC H G++
Sbjct: 295 FDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK YGI P+IE +GCM+DLL RAG + +A +R MP NA IW +LL
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G +ELGE A + +LE +SG++ +LSN+YA RW + +RK+M GVKK
Sbjct: 415 ACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKT 474
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S +E+ RV+EF+ GD SHP + Y +L KI +K
Sbjct: 475 PGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 129/248 (52%), Gaps = 6/248 (2%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACA 86
A +F + N+ +W T+I G+A+ + P+ A+ LF +M ++ PD A A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
+L V LGE IH+ + + G +++ + N+L+ MY+ G A QVFE M + + W +
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
+I G AL+G+ EAL ++ M V+P+ T +++LSAC +G + LG R M +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYM-VKV 266
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
G+ ++DL + G ++A+K+ M E + W SL+ + G LG A
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLIVGLAVNG---LGNEA 322
Query: 267 LQHLIKLE 274
L+ +LE
Sbjct: 323 LKLFGELE 330
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 97 IHNYIEQYGLNTIVP-LNNALI-DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH + ++G+ P N LI + + S + A Q+F ++ ++ TW TMI G A
Sbjct: 54 IHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAES 113
Query: 155 GLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
A+++FS+M A + P+ TF + A + V LG +++ R G +
Sbjct: 114 ENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVV-VRNGFDSLRF 172
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + G+ + A ++ M + A W S++
Sbjct: 173 VQNSLVHMYSVFGFAESAYQVFEIMSYRDRVA-WNSVI 209
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 231/356 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V GY + G+L AR F+ M ++ ISWT +I GY + NE++ +FR MQ +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE M++ L+ACA LG++E+GEWI YI++ + V + NALIDMY K G KA +
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +M + TWT M+ GLA +G G+EA+ +F +M+ ++P++IT++ +LSAC H G+
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ R++F M+S + IEP + YGCM+D+LGRAG ++EA ++LR+MP N+ +WG+LL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++ D + E A + +++LEP N YA+L NIYA RW + ++R+ + D+ +KK
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 367
PG S IEV+ HEFVAGD SH + +Y L ++ + FA +L + + E+
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEA 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 11/308 (3%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T + L+ FW + + G+ ++ A LF + E +V+ W +I G++++D E + L
Sbjct: 67 TFQKKLFVFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRL 121
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ M E V PD L+ + G A+ G+ +H ++ ++GL + + + NAL+ MY+
Sbjct: 122 YLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYS 181
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G + A VF+ + V +W MI+G E++++ MER V P +T +
Sbjct: 182 LCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+LSAC V +L +R + S EP + +++ G + A ++ R M
Sbjct: 242 VLSACSKVKDKDLCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-A 299
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
+ W S++ G+++L A + ++ + ++ I+ + Y G +NES +I
Sbjct: 300 RDVISWTSIVKGYVERGNLKL---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 302 KVMRDMGV 309
+ M+ G+
Sbjct: 357 REMQSAGM 364
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 238/359 (66%), Gaps = 1/359 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ GY ++GDL +R LF+ M K+V+SW +I+G AQ EAI +F MQ+ +
Sbjct: 192 LWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGD 251
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P+ + +++ L A ++LGA+ELG+W+H + E+ + L +ALIDMY+K G I KA+
Sbjct: 252 VPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAV 311
Query: 131 QVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVFE ++NK + ITW+ +I GLA+HG R+ALD F RM++A V P+++ +I +LSAC H
Sbjct: 312 QVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHA 371
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR + M + G+ P+IE YGCM+DLLGRAG L+EAE+L+ MP + + I +
Sbjct: 372 GLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKA 431
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++G++E+GE + L+ PH+SG+Y LSN++A G W K+R M+++ +
Sbjct: 432 LLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDI 491
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+K PGCS+IE+ +HEF+ D SHP + ++ +L +++ +++ + N +L D
Sbjct: 492 RKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMD 550
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 44/291 (15%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-------EAITLFRRMQVEN-VKPDE 75
++ AR F + N SW T+I A D + EA+ F M + V+P++
Sbjct: 64 EIKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNK 123
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGL--------NTI------------------ 109
L ACA+L +E G+ +H ++ + GL N +
Sbjct: 124 FTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQ 183
Query: 110 ------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
V L N +ID Y + G + + ++F++M NKSV++W MI+G A +G +EA++M
Sbjct: 184 TRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEM 243
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M+ V PN +T +++L A +G +ELG ++ ++ + IE +ID+
Sbjct: 244 FHDMQLGDVPPNYVTLVSVLPAVSRLGAIELG-KWVHLFAEKNEIEIDDVLGSALIDMYS 302
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ G + +A ++ + + N W +++ ++G AL H +++
Sbjct: 303 KCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGR---ARDALDHFWRMQ 350
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 217/339 (64%), Gaps = 2/339 (0%)
Query: 12 WNTMVA-GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ YAK G + +AR +F+ M E+NV+ WT++I+GY Q+ + +A+ LFR MQ+
Sbjct: 267 WNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISG 326
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VK D+ + +S+C Q+GA++LG ++H Y + +GL + + N+LIDMY+K G I KA
Sbjct: 327 VKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAH 386
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHV 189
++F + + +WT MI G A++GL EALD+F++ME V PNEITF+ +L++C H
Sbjct: 387 EIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHG 446
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G +F+ M YGI P+IE YGCM+DLLGRA L EAE+ + MP + AIW S
Sbjct: 447 GLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRS 506
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A G+V L E + + +LEP G +LSN+YA RW + K+R M V
Sbjct: 507 LLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRV 566
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
K PGCS IEV+ HEF++GD +H + + +Y IL IN
Sbjct: 567 SKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNILLGIN 605
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 126/238 (52%), Gaps = 12/238 (5%)
Query: 3 TLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
RLL K +NTM+A Y + G++ A LFE+M E+N + ++ GY+ + A
Sbjct: 161 VFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSA 220
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID- 118
+F ++ N + + A +S A+ G+V+ + + + Q + T N +I
Sbjct: 221 KHVF---EMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATW----NVMIGV 273
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MYAK G + A +VF+ M ++V+ WT+MI+G G ++A+ +F M+ + VK ++ T
Sbjct: 274 MYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDAT 333
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
++S+C +G ++LG RY + +G+ I +ID+ + G +++A ++ R
Sbjct: 334 IATVVSSCGQMGALDLG-RYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFR 390
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 58 EAITLFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 115
+A+ L+ +M V+P + + L A A+ + GE +H ++ + G T +
Sbjct: 85 DAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATT 144
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-------- 167
L+D+YA+ G++ A +VF+ + K + TMIA G A ++F M
Sbjct: 145 LVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHTL 204
Query: 168 --------------------ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
E A N + A++S G V+ R F+ M+ R
Sbjct: 205 MEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMRQR-- 262
Query: 208 IEPKIEQYGCMIDLL-GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + MI ++ + G +++A K+ MP E N W S+++ G
Sbjct: 263 ---DVATWNVMIGVMYAKCGLVEDARKVFDAMP-ERNVVCWTSMISGYTQVG 310
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 241/360 (66%), Gaps = 4/360 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M + +K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H G+
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +LL
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GVKK
Sbjct: 400 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 459
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E +
Sbjct: 460 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 519
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWI 97
NV W TLI GYA++ A +L+R M+V V+PD + A + V LGE I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H+ + + G +++ + N+L+ +YA G + A +VF+ M K ++ W ++I G A +G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL +++ M +KP+ T +++LSAC +G + LG+R ++ + G+ +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR-VHVYMIKVGLTRNLHSSNV 262
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++DL R G ++EA+ L M + N+ W SL+ + G
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 302
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 226/335 (67%), Gaps = 4/335 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G AK G+++ +R LF+ M +N +SW ++I+GY + + EA+ LF RMQ E +
Sbjct: 166 WNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGI 225
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKA 129
KP E M++ L+ACA LGA+ GEWIH+YI + LN+IV A+IDMY+K G I KA
Sbjct: 226 KPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVI--TAIIDMYSKCGSIDKA 283
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
LQVF++ K + W ++I GLA+ G G EA+ +FS++E + +KP+ ++FI +L+AC H
Sbjct: 284 LQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHA 343
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ + YF +M Y IEP I+ Y CM+D+LGRAG L+EAE+L++ MP +A IWGS
Sbjct: 344 GMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGS 403
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL++ YG++E+ + A + + +L+P+ S ++ +LSN+YA + E+ + R +++ +
Sbjct: 404 LLSSCREYGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQM 463
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PGCS IEV+ VHEFVAG HP +Y L
Sbjct: 464 DKEPGCSLIEVNGEVHEFVAGGRLHPRSKDIYHAL 498
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 40/292 (13%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIA 77
+ GD+N A +F + N+ W T+I G++Q P+ AI+LF M + +P +
Sbjct: 40 SPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLT 99
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ A AQLG G +H + + GL + N +++MY G +G+A ++F+
Sbjct: 100 YPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGAT 159
Query: 138 NKSVITWTTMIAGLALHG-----------------------------LGR--EALDMFSR 166
V+TW TMI GLA G GR EA+++FSR
Sbjct: 160 GFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSR 219
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 225
M+ +KP+E T +++L+AC +G + G + I+K+ + + + +ID+ +
Sbjct: 220 MQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIV--ITAIIDMYSKC 277
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 277
G + +A ++ + P + + W SL+ + G G A++ KLE N
Sbjct: 278 GSIDKALQVFKSAP-KKGLSCWNSLILGLAMSGR---GNEAVRLFSKLESSN 325
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 227/344 (65%), Gaps = 2/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN+M+AGYA+ GDL A LF LM +NV SWT +I+GYAQ Q +A+++F M+ E
Sbjct: 151 WNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETE 210
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++P+E+ + + L ACA LGA+E+GE I Y G + ++NAL++MYA+ G+I KA
Sbjct: 211 MRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAW 270
Query: 131 QVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VFE + + ++ +W +MI GLA+HG EA+++F +M R P+++TF+ +L AC H
Sbjct: 271 GVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHG 330
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V G+ +F M+ + I PK+E YGCM+DLLGRAG L+EA L+ RMP E ++ +WG+
Sbjct: 331 GMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGT 390
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G VEL E A L +LEP N GNY ILSNIYA GRW+ ++RK+M+ +
Sbjct: 391 LLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKI 450
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K G S+IE +H+F+ D SH D +Y +L +++ +MK
Sbjct: 451 TKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKL 494
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 33/279 (11%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ ++ + A LF+ + + V + LI Y+ ++ +L+ +M ++ P+
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------ 122
E + SACA L + + G +H + + G V AL+DMYAK
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 123 -------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
G + AL++F M ++V +WT MI+G A +G +AL M
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 164 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
F M E ++PNE+T ++L AC ++G +E+G R + G + ++++
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGER-IEVYARGNGYFKNLYVSNALLEMY 260
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
R G + +A + + N W S++ ++G +
Sbjct: 261 ARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCD 299
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
I+ Y L + LI + I A ++F+ + +V + +I + HG +
Sbjct: 7 IQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQC 66
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
++++M PNE +F + SAC + + GR + + +KS +G + + ++
Sbjct: 67 FSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCD--VFALTALV 124
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP-HNS 278
D+ + G L A K M + W S++A GD+ E AL+ L +L P N
Sbjct: 125 DMYAKLGLLSLARKQFDEMTVR-DVPTWNSMIAGYARCGDL---EGALE-LFRLMPARNV 179
Query: 279 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKK---------MPGCS---YIEVSKRVHE 326
++ + + YA G++ ++ + +M + + +P C+ +EV +R+
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 327 FVAGD 331
+ G+
Sbjct: 240 YARGN 244
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 226/343 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA G++ AR +F+ +++ SW+++I+ YA+ + EA+ L+R M ++
Sbjct: 57 WNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASI 116
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I +++ +SAC+ LGA+ +G +H ++E + + L ALIDMYAK G I A +
Sbjct: 117 IPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQR 176
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K V TW++MI GLA HGLG E+L +FS+M +KPN +TF+ +L AC HVGL
Sbjct: 177 VFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGL 236
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G++YF M +GIEP +E YGCM+DLLGR+G+++EA +L+R M FE + IW +LL
Sbjct: 237 VSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VE+ E A+ L L+P G+Y +LSNIYA W ++RK +R +++
Sbjct: 297 GACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQR 356
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE +++HEFV+GD HP +Y++L ++ ++K A
Sbjct: 357 IPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQA 399
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K ++ YAK GD+ +A+ +F+ M EK+V +W+++I G A +E+++LF +M E
Sbjct: 156 KLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISE 215
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+KP+ + + L AC +G V G ++ + E +G+ V ++D+ +SG + +
Sbjct: 216 GMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEE 275
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A Q+ +M I W ++ +H
Sbjct: 276 ARQLIRSMTFEPDTIIWRALLGACRIH 302
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 33/173 (19%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------- 155
V L N ++ Y ++ +A +VF+ M + +++W TMI G A+ G
Sbjct: 23 VFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTED 82
Query: 156 -----------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+EAL+++ M A + P+ IT ++++SAC +G + +G
Sbjct: 83 RDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEV 142
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++S IE ++ +ID+ + G ++ A+++ RMP E + W S++
Sbjct: 143 HRFVESNR-IELDLKLGTALIDMYAKCGDIESAQRVFDRMP-EKDVQTWSSMI 193
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 213/337 (63%), Gaps = 2/337 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++ Y L AR +F+ M ++N +SW +IA Y Q ++ +EA LF RM++EN
Sbjct: 133 NNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLEN 192
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D+ + LSAC LGA+E G+WIH YIE+ G+ L +IDMY K G + KA
Sbjct: 193 VVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS 252
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF + K + +W MI GLA+HG G A+++F MER V P+ ITF+ +LSAC H G
Sbjct: 253 EVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSG 312
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ YF M G++P +E +GCM+DLLGRAG L+EA KL+ MP +A + G+L
Sbjct: 313 LVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGAL 372
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ A I+G+ ELGE + +I+LEPHNSG Y +L+N+YA GRW + K+RK+M D GVK
Sbjct: 373 VGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVK 432
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K PG S IE V EF+AG +HP +Y L +I
Sbjct: 433 KAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEI 469
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 48 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 107
+GY + I ++ RM ++V P++ + AC A+E G+ IH ++ ++G
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFS 165
N LI MY + +A +VF+NM ++++ ++W MIA EA +F
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
RM V ++ ++LSAC +G +E G ++ + + GIE + +ID+ +
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKC 245
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
G L++A ++ +P + + W ++ ++G GE A++ ++E
Sbjct: 246 GCLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEME 290
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y K G L A +F + +K + SW +I G A + AI LF+ M+ E
Sbjct: 233 KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 292
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGK 128
V PD I + LSACA G VE G+ Y+ E GL + ++D+ ++G + +
Sbjct: 293 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 352
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG 155
A ++ M N ++ +HG
Sbjct: 353 ARKLINEMPVNPDAGVLGALVGACRIHG 380
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 228/348 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V GY + G+L AR F+ M ++ ISWT +I GY + NE++ +FR MQ +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE M++ L+ACA LG++E+GEWI YI++ + V + NALIDMY K G KA +
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +M + TWT M+ GLA +G G+EA+ +F +M+ ++P++IT++ +LSAC H G+
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ R++F M+S + IEP + YGCM+D+LGRAG ++EA ++LR+MP N+ +WG+LL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++ D + E A + +++LEP N YA+L NIYA RW + ++R+ + D+ +KK
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IEV+ HEFVAGD SH + +Y L ++ + FA +L +
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPD 652
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 11/308 (3%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T + L+ FW + + G+ ++ A LF + E +V+ W +I G++++D E + L
Sbjct: 67 TFQKKLFVFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRL 121
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ M E V PD L+ + G A+ G+ +H ++ ++GL + + + NAL+ MY+
Sbjct: 122 YLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYS 181
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G + A VF+ + V +W MI+G E++++ MER V P +T +
Sbjct: 182 LCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+LSAC V +L +R + S EP + +++ G + A ++ R M
Sbjct: 242 VLSACSKVKDKDLCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-A 299
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
+ W S++ G+++L A + ++ + ++ I+ + Y G +NES +I
Sbjct: 300 RDVISWTSIVKGYVERGNLKL---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 302 KVMRDMGV 309
+ M+ G+
Sbjct: 357 REMQSAGM 364
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 219/334 (65%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W M++GYA GDL +A +F M KNV+SW +I+GY + ++A+ +F M +
Sbjct: 237 WTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGE 296
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD+ +++ LSACA LG++E G+WI++YI++ L+ +PL NALIDM+AK G + A
Sbjct: 297 CRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAK 356
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +M + +ITWTTM++GLA++G REA+++F +M KP+++ FIA+LSAC H G
Sbjct: 357 EVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGG 416
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+R F+ M +GI+P+IE YGCM+DLLGRAG L+EA + RM + NA IW +L
Sbjct: 417 LVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATL 476
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L I+G+ +L + + ++ EP N ++SN+ A GRW + R MR ++
Sbjct: 477 LFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRME 536
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS I+V RVHEF+A DT H +Y+ L
Sbjct: 537 KVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRAL 570
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 10/228 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++ Y G++ +A L + M E+N+++W +++ G ++ A ++F +M + N
Sbjct: 144 WNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRN- 202
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
E++ + +S ++G V + I Q T+V A+I YA +G + A
Sbjct: 203 ---EVSWNSMISGYVRIGDVRAAQSI---FYQMPEKTVVSW-TAMISGYATNGDLKSAEN 255
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
+F +M K+V++W MI+G + +AL +F M +P++ T I+ILSAC H+G
Sbjct: 256 IFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLG 315
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+E G ++ N + + I +ID+ + G ++ A+++ M
Sbjct: 316 SLEHG-KWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHM 362
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
EA+ ++ RM+ V+ + L A+E G IH I + G + V + N+L+
Sbjct: 57 EALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLL 116
Query: 118 DMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPN 175
YA S +G A +VFE M + VI+W +MI+ G + A+ + +M ER N
Sbjct: 117 GFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPER-----N 171
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+T+ +++ G +EL F M R + + MI R G ++ A+ +
Sbjct: 172 IVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEV-----SWNSMISGYVRIGDVRAAQSIF 226
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+MP E W ++++ GD++ E H+
Sbjct: 227 YQMP-EKTVVSWTAMISGYATNGDLKSAENIFNHM 260
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 222/344 (64%), Gaps = 11/344 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WNT+++GYA G++ + LFE M +NV SW LI GY + EA+ F+RM V
Sbjct: 253 WNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVE 312
Query: 69 --------ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
V P++ ++A L+AC++LG +E+G+W+H Y E G + + NALIDMY
Sbjct: 313 GEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMY 372
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
AK G I KAL VF+ + K +ITW T+I GLA+HG +AL +F RM+RA +P+ +TF+
Sbjct: 373 AKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFV 432
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
ILSAC H+GLV G +F M Y I P+IE YGCM+DLLGRAG + +A ++R+MP
Sbjct: 433 GILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPM 492
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E +A IW +LL A +Y +VE+ E ALQ LI+LEP+N GN+ ++SNIY LGR + ++
Sbjct: 493 EPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARL 552
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ MRD G +K+PGCS I + + EF + D HP+ D +Y+ L
Sbjct: 553 KVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSIYRAL 596
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 117/260 (45%), Gaps = 52/260 (20%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +VA + D+ +AR LF+L +++V+ W +++GY ++ A LF RM
Sbjct: 191 WTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRM----- 245
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD M W N ++ YA +G++ ++
Sbjct: 246 -PDRDVM----------------SW-----------------NTVLSGYATNGEVESFVK 271
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-----------ERARVKPNEITFI 180
+FE M ++V +W +I G +GL +EAL+ F RM V PN+ T +
Sbjct: 272 LFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVV 331
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
A+L+AC +G +E+G ++ ++ G + + +ID+ + G +++A + +
Sbjct: 332 AVLTACSRLGDLEMG-KWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDV 390
Query: 241 EANAAIWGSLLAASNIYGDV 260
+ + W +++ ++G V
Sbjct: 391 K-DIITWNTIINGLAMHGHV 409
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+ + A++G + AR +F+ + N +W + GYAQ + + + LF RM P
Sbjct: 59 SFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASP 118
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--IGKALQ 131
+ + +CA A + GE +H + + G + + ALI MY+ G + A +
Sbjct: 119 NCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYK 178
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE--ITFIAILSACCHV 189
VF M++K+V WT ++A H R DM S + P + + ++S +
Sbjct: 179 VFAEMRDKNVFAWTAIVAA---HVACR---DMVSARRLFDLAPQRDVVLWNVVVSGYIEL 232
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + R F+ M R + + ++ G ++ KL MP N W
Sbjct: 233 GDMVAARELFDRMPDR-----DVMSWNTVLSGYATNGEVESFVKLFEEMPVR-NVYSWNG 286
Query: 250 LLAA 253
L+
Sbjct: 287 LIGG 290
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
I++L C +L I I +GL + + I A+ G I +A +VF+
Sbjct: 26 ISLLRTCGTCVRL------HQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDK 79
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+ TW M G A + + +F+RM RA PN TF ++ +C + G
Sbjct: 80 TAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEG 139
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG--YLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ R G + +I + G ++ +A K+ M + N W +++AA
Sbjct: 140 EEVHCVVAKR-GFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMR-DKNVFAWTAIVAA 197
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 228/332 (68%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K D+ +A+ +F + EK+V+SWT++++G A+ E++ LFR+MQ+ ++
Sbjct: 50 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIE 109
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDEI ++ LSACAQ GA++ G++IH I+++ +N + L AL+DMYAK G I ALQV
Sbjct: 110 PDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQV 169
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M+ ++V TW MI GLA+HG G +A+ +F +ME ++ P+++TFIA+L AC H GLV
Sbjct: 170 FRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLV 229
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G F MK+++ IEP++E YGC++DLL RA + +A + MP +AN+ +W +LL
Sbjct: 230 DEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLG 289
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A G +L E + +I+LEP + G Y +LSN+YA + +W+ + K+RK M++ G++K
Sbjct: 290 ACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKT 349
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H+FVAGD SH +++Y ++
Sbjct: 350 PGCSWIELNGMIHQFVAGDRSHLQTEQIYAMI 381
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 123/195 (63%), Gaps = 2/195 (1%)
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+++N++PDE+ M++ + ACAQLG +E G+ +H+Y ++ GL+ + +NNA++DMY K I
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A +VF ++ K V++WT+M++GLA G +E+L +F +M+ +++P+EIT + +LSAC
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
G ++ G +Y +++ ++ I + ++D+ + G + A ++ RRM N
Sbjct: 123 AQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFT 180
Query: 247 WGSLLAASNIYGDVE 261
W +++ ++G E
Sbjct: 181 WNAMIGGLAMHGHGE 195
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 244/366 (66%), Gaps = 5/366 (1%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L+Y N+++ YA GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M
Sbjct: 155 LIY-VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ +KPD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSA 185
+A +F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H G+V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IW +LL A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFS 362
GVKK+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N +
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 363 GVLESD 368
V E +
Sbjct: 514 DVEEEE 519
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWI 97
NV W TLI GYA++ A +L+R M+V V+PD + A + V LGE I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H+ + + G +++ + N+L+ +YA G + A +VF+ M K ++ W ++I G A +G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL +++ M +KP+ T +++LSAC +G + LG+R ++ + G+ +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR-VHVYMIKVGLTRNLHSSNV 262
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++DL R G ++EA+ L M + N+ W SL+ + G
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 302
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 224/348 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GD N A+ LF+ M E+++++W ++I GY + Q +A+ LF M E++
Sbjct: 245 WNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDI 304
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +L A+SA + + ++ G W+H+YI + G T L LI+MY+K G + AL+
Sbjct: 305 SPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALR 364
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K + WT++I GL +HGL + L++F M R +KP+ ITFI +L+AC H G
Sbjct: 365 VFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGF 424
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E RYF +M YGI+P IE YGC+ID+L RAG+L+EA+ + RMP +AN IW SLL
Sbjct: 425 AEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLL 484
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ S +G++ +GE A QHLI L P +G Y ILSN+YA G W + ++R++M+ G+KK
Sbjct: 485 SGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKK 544
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IE +HEF+ GD SHP + +Y LC++ ++ A H+ +
Sbjct: 545 DPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPD 592
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 125/241 (51%), Gaps = 13/241 (5%)
Query: 15 MVAGYA--KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++A YA ++ +L A +LF+ + E ++SW LI Y + + N+AI LF ++ + V
Sbjct: 53 LLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV- 111
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L CA+LGA++ G+ IH + + G + ++L+ MY+K G+I +V
Sbjct: 112 PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKV 171
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K V++W ++I G A G AL+MF M + + ++ ++ G +
Sbjct: 172 FDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKL 227
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E R F+ M R + + MI+ +AG A++L +MP E + W S++
Sbjct: 228 EAARDVFDRMPIRNSV-----SWNAMINGYMKAGDSNTAKELFDQMP-ERSLVTWNSMIT 281
Query: 253 A 253
Sbjct: 282 G 282
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 126/250 (50%), Gaps = 12/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V+ Y+K G++ R +F+ M +K+V+SW +LI GYA+ + A+ +F M +
Sbjct: 153 SSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP----E 208
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + ++ G +E + ++ + V NA+I+ Y K+G A ++
Sbjct: 209 KDSFSWTILIDGLSKSGKLEAAR---DVFDRMPIRNSVSW-NAMINGYMKAGDSNTAKEL 264
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +S++TW +MI G + +AL +F M R + PN T + +SA G+V
Sbjct: 265 FDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAA--SGMV 322
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG R+ + + G + +I++ + G ++ A ++ R +P + W S++
Sbjct: 323 SLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIP-KKKLGHWTSVI 381
Query: 252 AASNIYGDVE 261
++G VE
Sbjct: 382 VGLGMHGLVE 391
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 241/360 (66%), Gaps = 4/360 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M + +K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GVKK
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E +
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
+ V LGE IH+ + + G +++ + N+L+ +YA G + A +VF+ M K ++ W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I G A +G EAL +++ M +KP+ T +++LSAC +G + LG+R ++ + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR-VHVYMIKVG 119
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + ++DL R G ++EA+ L M + N+ W SL+ + G
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 229/344 (66%), Gaps = 3/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ Y ++GD+ AR LF+ + K++++WT ++ GYAQ P +A+ +FRR++ E V
Sbjct: 179 WTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGV 238
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
+ DE+ ++ +SACAQLGA + WI + E +G+ V + +ALIDMY+K G + +A
Sbjct: 239 EIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEA 298
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ M+ ++V ++++MI G A+HG R A+ +F M VKPN +TF+ +L+AC H
Sbjct: 299 YDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHA 358
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G++ F M+ YG+ P E Y CM DLL RAGYL++A +L+ MP E++ A+WG+
Sbjct: 359 GLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGA 418
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS+++G+ ++ E A + L +LEP N GNY +LSN YA GRW++ K+RK++R+ +
Sbjct: 419 LLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNL 478
Query: 310 KKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KK PG S++E +H+FVAGD SHP + + + L + ++K
Sbjct: 479 KKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLK 522
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 34/263 (12%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 88
R LF + N +WT LI YA ++A++ + M+ V P A SACA +
Sbjct: 63 RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAV 122
Query: 89 GAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI----- 142
LG +H + G ++ + +NNA+IDMY K G + A VF+ M + VI
Sbjct: 123 RHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGL 182
Query: 143 --------------------------TWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
TWT M+ G A + + +AL++F R+ V+ +E
Sbjct: 183 IVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDE 242
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+T + ++SAC +G + +I +S +G+ + +ID+ + G ++EA +
Sbjct: 243 VTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVF 302
Query: 236 RRMPFEANAAIWGSLLAASNIYG 258
+ M E N + S++ I+G
Sbjct: 303 KGMR-ERNVFSYSSMIVGFAIHG 324
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + + WT +I AL G +AL +S M + RV P TF A+ SAC V
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG + G + +ID+ + G L+ A + MP E + W L+
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMP-ERDVISWTGLI 183
Query: 252 AASNIYGDVE 261
A GD+
Sbjct: 184 VAYTRIGDMR 193
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 229/343 (66%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
M+ Y++ G + A LF+ + K+ + WT +I G + + N+A+ LFR MQ+ENV
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+E + LSAC+ LGA+ELG W+H+++E + + NALI+MY++ G I +A +VF
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF 313
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
M++K VI++ TMI+GLA+HG EA++ F M +PN++T +A+L+AC H GL++
Sbjct: 314 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLD 373
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+G FN MK + +EP+IE YGC++DLLGR G L+EA + + +P E + + G+LL+A
Sbjct: 374 IGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSA 433
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
I+G++ELGE + L + E +SG Y +LSN+YA G+W ES +IR+ MRD G++K P
Sbjct: 434 CKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEP 493
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
GCS IEV ++HEF+ GD +HP + +YQ L ++N ++F E+
Sbjct: 494 GCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKEN 536
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+ + ++ A +F ++ NV +T +I G+ + + ++L+ RM +V PD +
Sbjct: 72 STLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVIT 131
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK-------------- 125
+ L AC +++ IH + + G + + ++++Y KSG+
Sbjct: 132 SVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR 187
Query: 126 -----------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
I +AL++F+++K K + WT MI GL + +AL++F M+
Sbjct: 188 DHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
V NE T + +LSAC +G +ELGR + ++++ +E +I++ R G +
Sbjct: 248 MENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR-MELSNFVGNALINMYSRCGDI 306
Query: 229 QEAEKLLRRM 238
EA ++ R M
Sbjct: 307 NEARRVFRVM 316
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 221/336 (65%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++ Y K G++ +A LF+ + K++++WT +++G+AQ +P EAI F +MQ V
Sbjct: 216 WTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGV 275
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIE--QYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ DEI ++ +SACAQLGA + +WI + E ++G V + +ALIDMY+K G +G A
Sbjct: 276 ETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDA 335
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF+ MK ++V ++++MI G A+HG +A+ +F M + +KPN +TFI +L+AC H
Sbjct: 336 YRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHA 395
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+VE G + F +M+ YGI+P + Y CM+DLLGRAG LQEA +L++ MP E + +WG+
Sbjct: 396 GMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGA 455
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+ ++ A HL +LEP+ GNY +L+NIYA GRWN+ +RK+MR G+
Sbjct: 456 LLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGL 515
Query: 310 KKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQIL 344
+K P S+IE K VHEF +GD +HP + Q L
Sbjct: 516 RKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQAL 551
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 34/278 (12%)
Query: 30 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 89
++F + N + LI GY ++ E+ + M+ E V P A AC
Sbjct: 101 SIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKM 160
Query: 90 AVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT----- 143
V LG IH I G + + N++IDMY K G + +VF+ M N+ VI+
Sbjct: 161 DVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELI 220
Query: 144 --------------------------WTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
WT M++G A + REA+ F +M+ V+ +EI
Sbjct: 221 SAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEI 280
Query: 178 TFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T I ++SAC +G + ++ KS +G + + +ID+ + G + +A ++ +
Sbjct: 281 TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
M E N + S++ ++G V ++K E
Sbjct: 341 GMK-ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTE 377
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L +F + + + +I G + +E+ + +S M + V P TF A+ AC
Sbjct: 100 LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAK 159
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
V LGR+ G + MID+ + G+L+ K+ MP + W
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMP-NRDVISWTE 218
Query: 250 LLAASNIYGDVE 261
L++A G++E
Sbjct: 219 LISAYVKSGNME 230
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 228/356 (64%), Gaps = 1/356 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y D++ AR +F+ + E V+++ +I A+ +PNEA+ LFR +Q +KP
Sbjct: 175 TLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKP 234
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ ML ALS+CA LGA++LG WIH Y+++ G + V +N ALIDMYAK G + A+ VF
Sbjct: 235 TDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVF 294
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
++M + W+ MI A HG G +A+ M M++A+V+P+EITF+ IL AC H GLVE
Sbjct: 295 KDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVE 354
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G YF+ M YGI P I+ YGCMIDLLGRAG L+EA K + +P + +W +LL++
Sbjct: 355 EGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS 414
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ +G+VE+ + +Q + +L+ + G+Y ILSN+ A GRW++ +RK+M D G K+P
Sbjct: 415 CSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVP 474
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
GCS IEV+ VHEF +GD H L+ L ++ ++K A ++ + S V +D+
Sbjct: 475 GCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDT-SLVFYADI 529
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 81
+ +++A +F+ + + +++ + T+ GYA+ D P AI L ++ + PD+ +
Sbjct: 82 IASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSL 141
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L ACA+L A+E G+ +H + G+ + + LI+MY + A +VF+ + V
Sbjct: 142 LKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCV 201
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+ + +I A + EAL +F ++ + +KP ++T + LS+C +G ++LGR
Sbjct: 202 VAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEY 261
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+K + G + ++ +ID+ + G L +A + + MP A W +++ A +G
Sbjct: 262 VK-KNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQA-WSAMIVAYATHG 316
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 233/342 (68%), Gaps = 4/342 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
T++ YAK+GDL+ A+ LF+ M + ++ SW LIAG+AQ +P +AI F+RM+V+ N+
Sbjct: 142 TTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNL 201
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + + AL AC+QLGA++ GE +H YI + LN+ V + N +IDMYAK G + KA
Sbjct: 202 RPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYW 261
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFENM+ +KS+ITW TMI A+HG G +ALD+F ++ R+ + P+ ++++A+L AC H G
Sbjct: 262 VFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAG 321
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G + FN M R G+EP I+ YG M+DLLGRAG L+EA ++ +PF N +W +L
Sbjct: 322 LVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTL 379
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A YGDVE+ E A + L+++ + G++ +LSN+YA RW++ G++R MR VK
Sbjct: 380 LGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVK 439
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PG SYIE+ ++++FV GD SH +Y L +IN ++K
Sbjct: 440 KTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIK 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIA 77
+ GDL+ A +F + + W +I G A P A+ +R M N + D +
Sbjct: 46 SSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALT 105
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
AL ACA+ A +H+ + ++G N V L L+D YAK G + A ++F+ M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMP 165
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGR 196
+ +W +IAG A +A+ F RM+ ++PN +T L AC +G ++ G
Sbjct: 166 QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 197 RYFNIMKSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+Y +E K ++ +ID+ + G + +A + M + + W +++
Sbjct: 226 SV-----HKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIM 280
Query: 253 ASNIYGD 259
A ++GD
Sbjct: 281 AFAMHGD 287
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 227/354 (64%), Gaps = 7/354 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M++ YAK+G L++AR LF+ + K+++ W ++ GY Q +P+EA+ LFR+M V+
Sbjct: 192 TAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVE 251
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKIGK 128
PDE++++ ALSA AQLG E G W+H+++ G V LN AL+DMY K G + +
Sbjct: 252 PDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEE 311
Query: 129 ALQVFENMK---NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
A+ VF ++ ++ V+ W MI G A+HG REAL+ F ++ + P +ITFI +L+A
Sbjct: 312 AVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNA 371
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H GLV+ GR F M+ YGI PK+E YGCM+DLLGRAG ++EA L++ M + +AA
Sbjct: 372 CSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAA 431
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+W SLL A ++ ++ LG+ +L+ NSG Y +LSN+YA G+W E G++R +MR
Sbjct: 432 MWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMR 491
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GV+K PGCS +EV +RV EFVAGD SHP +Y L ++N + H+ +
Sbjct: 492 ASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPH 545
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--ENVKPDEI 76
YA G L+ A AL + + +T+ I ++ A+ L M + + P
Sbjct: 66 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAH 125
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY---------------- 120
+ A+L AC G + +G +H Y + L+ + AL+ MY
Sbjct: 126 TLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGM 182
Query: 121 ----------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
AK G++ A +F+ + K ++ W M+ G HG EAL +F
Sbjct: 183 RPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLF 242
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-----KSRYGIEPKIEQYGCMI 219
+M R+ V+P+E++ + LSA +G E GR + + ++R + ++ ++
Sbjct: 243 RQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGT--ALV 300
Query: 220 DLLGRAGYLQEAEKLLRRM 238
D+ + G L+EA + R +
Sbjct: 301 DMYYKCGSLEEAVAVFRDL 319
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 231/357 (64%), Gaps = 9/357 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G + A +FE MT+K+VISWT+L+ G EA+ LF M++ +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + A LSACA+L +E G+ +H + GL + + ++N+L+ MYAK G I A +V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M+ + VITWT +I G A +G GRE+L+ ++ M + VKP+ ITFI +L AC H GLV
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR YF M+ YGI+P E Y CMIDLLGR+G L EA++LL +M + +A +W +LLA
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+VELGE A +L +LEP N+ Y +LSN+Y+ G+W E+ K R++M+ GV K
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ------ILCKING---QMKFAEHLQNE 360
PGCS+IE+S +VH F++ D SHP +Y IL K G M FA H +E
Sbjct: 306 PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
+NNAL+DMYAK G A VFE M +K VI+WT+++ G +G EAL +F M
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 172 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
+ P++I A+LSAC + ++E G++ + N +KS G ++ ++ + + G +++
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIED 121
Query: 231 AEKLLRRMPFEANAAIWGSLL 251
A K+ M + + W +L+
Sbjct: 122 ANKVFDSMEIQ-DVITWTALI 141
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 226/357 (63%), Gaps = 2/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YAK G L ++ +F MT ++++SW+T+IAGY+Q +EA L M++E K
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPK 416
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P E A+ + LSAC + +E G+ +H Y+ GL + +ALI+MY K G I +A ++
Sbjct: 417 PTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +N +++WT MI G A HG RE +D+F ++ R ++P+ +TFI +LSAC H GLV
Sbjct: 477 FDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLV 536
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG RYFN M +Y I P E YGCMIDLL RAG L +AE ++ MPF + +W +LL
Sbjct: 537 DLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLR 596
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GDVE G + +++LEP+ +G + L+NIYA G+W E+ IRK+M+ GV K
Sbjct: 597 ACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKE 656
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PG S+I+V V FVAGD SHP + +Y +L + + + A+ +Q +G L D+
Sbjct: 657 PGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQE--TGFLPYDL 711
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 140/265 (52%), Gaps = 12/265 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N + K G L NAR +F+ M++K+ ISWTTLI+GY + +EA+ LF+ M+VE+ +
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D + A AC V GE +H Y + GL V + +AL+DMY K+GKI + +
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++V++WT +I GL G +EAL FS M R+RV+ + TF L AC G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ GR + MK + + + + + + G L+ L +M + W ++
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTI 289
Query: 251 LAASNIYGDVELG--ECALQHLIKL 273
+ V++G ECA+Q I++
Sbjct: 290 ITTL-----VQMGQEECAVQAFIRM 309
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 121/223 (54%), Gaps = 1/223 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+ Y K G L LFE M+ ++V+SWTT+I QM Q A+ F RM+ +V
Sbjct: 256 NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVS 315
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A +S CA L +E GE +H I GL + + N+++ MYAK G++ + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + +++W+T+IAG + G EA ++ S M KP E ++LSAC ++ ++
Sbjct: 376 FHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E G++ + S G+E +I++ + G ++EA ++
Sbjct: 436 EHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G + R +F M +NV+SWT +I G + EA+ F M V+ D
Sbjct: 161 YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL ACA GA+ G IH + G + + N L MY K GK+ L +FE M
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V++WTT+I L G A+ F RM + V PNE TF A++S C ++ +E G +
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++ G+ + ++ + + G L + + M + W +++A + G
Sbjct: 341 HALIL-HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYSQGG 398
Query: 259 DV 260
V
Sbjct: 399 HV 400
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 81 ALSACAQLGAVE-----LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
A + C L +E L + IH +I Q T +P +N + K+G +G A ++F+
Sbjct: 20 ASTECIDLQVLERSNDNLSQNIH-FISQ----TDLPESNKQLKELVKTGHLGNARRMFDK 74
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERA---RVKPNEITFIAILS--ACCHVG 190
M K I+WTT+I+G EAL +F M R+ P FI L+ AC
Sbjct: 75 MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNS 130
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G + + G+ + ++D+ + G + E ++ MP N W ++
Sbjct: 131 DVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAI 188
Query: 251 L 251
+
Sbjct: 189 I 189
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 222/329 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV+GYA+ + AR++F+ M EK+V+SW+ +I+GY +QPNEA++LF MQ ++
Sbjct: 321 TAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIR 380
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DEI ML+ +SACA LG+++ +WIH +I+ GLN ++ + NALIDM+AK G I AL V
Sbjct: 381 SDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNV 440
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+VITWT+MI+ A+HG G+ +L +F +M+ +PNE+TF+++L ACCH GLV
Sbjct: 441 FNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLV 500
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR F+ M +YGIEPK E YGCM+DLLGRA +QEA L+ M E N IWGSLLA
Sbjct: 501 HEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSLLA 560
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GD++LG A + +++L+P++ G +L IY N + ++R VM+ V K
Sbjct: 561 ACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSKE 620
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
G S++E+++ HEF AG HP+ +++
Sbjct: 621 TGLSWMELNEPFHEFAAGGEKHPESGKIF 649
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 34/281 (12%)
Query: 11 FWNTMVAG-YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F T +AG YA G + + R +F+ M ++V+SW ++ Y Q EA+ LF +M+
Sbjct: 186 FVGTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNS 245
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM---------- 119
V PD++ + L AC + + +G+ IH+Y+ + +++ALI +
Sbjct: 246 GVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMA 305
Query: 120 ---------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
YA++ K+ A +F+ M K V++W+ MI+G
Sbjct: 306 EKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPN 365
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
EAL +F+ M+ ++ +EIT ++++SAC ++G ++ + +K+ G+ + +
Sbjct: 366 EALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNS-GLNKVLHICNAL 424
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
ID+ + G + A + MP + N W S+++A ++GD
Sbjct: 425 IDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMHGD 464
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 234/362 (64%), Gaps = 5/362 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGYAK G+L AR +F M ++ +SW+T+I G+A +EA FR + E +
Sbjct: 203 WNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEI 262
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ +E+++ LSACAQ GA E G+ +H ++E+ G + +NNALID Y+K G + A
Sbjct: 263 RTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARL 322
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+NM +S+++WT++IAGLA+HG G EA+ +F ME + V+P+ ITFI++L AC H G
Sbjct: 323 VFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSG 382
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G F+ MK+ YGIEP IE YGCM+DL GRA LQ+A + + MP NA IW +L
Sbjct: 383 LVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTL 442
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +I+G++E+ E L +++P NSG++ +LSN+YA+ G+W + IR+ M + +K
Sbjct: 443 LGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMK 502
Query: 311 KMPGCSYIEVSKRVHEFVAG----DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K PG S IE+ K ++ FVAG + + ++L +I+ ++ + +A L++ + E
Sbjct: 503 KTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEE 562
Query: 367 SD 368
+
Sbjct: 563 EE 564
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALS 83
L+ A LF + TLI + P ++ F +++ + + PD AL
Sbjct: 52 LHYALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALK 111
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A A + G +H+ ++G + + + LI MYA+ G G A +VF+ M +V+T
Sbjct: 112 AVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVT 171
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++ G A D+F M N ++ +L+ G + L RR F M
Sbjct: 172 WNAVLTAAFRCGDVEGAQDVFGCMPVR----NLTSWNGMLAGYAKAGELGLARRVFYEMP 227
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR---RMPFEANAAIWGSLLAASNIYGDV 260
R + + MI G EA R R N +L+A G
Sbjct: 228 LRDEV-----SWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAF 282
Query: 261 ELGE 264
E G+
Sbjct: 283 EFGK 286
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 216/321 (67%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA D++ A+ +F+ + E V+S+ +I GYA+ +PNEA++LFR++Q +KP
Sbjct: 167 TLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKP 226
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+++ +L+ LS+CA LGA++LG+WIH Y+++ GL+ V +N ALIDMYAK G + A+ VF
Sbjct: 227 NDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVF 286
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
E+M + W+ MI A+HG G++ + MF M RA+V+P+EITF+ +L AC H GLV+
Sbjct: 287 ESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVD 346
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G RYF M YGI P I+ YGCM+DLLGRAG L EA K + +P + +W +LL++
Sbjct: 347 EGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS 406
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ +G++EL + + +++L+ + G+Y ILSN+ A G+W + +RK+M G K+P
Sbjct: 407 CSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIP 466
Query: 314 GCSYIEVSKRVHEFVAGDTSH 334
GCS IEV VHEF +GD H
Sbjct: 467 GCSSIEVDNVVHEFFSGDGVH 487
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
++L K N+ ++ A LFE + + +++ + ++ GY++ + P +AI+LF +
Sbjct: 59 QILTKLINSCTQN-PTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIK 117
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
N+ PD+ + L AC A + G+ +H + GLN + LI+MYA
Sbjct: 118 ALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCND 177
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A +VF+ + V+++ +I G A EAL +F +++ ++KPN++T +++LS+
Sbjct: 178 VDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSS 237
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C +G ++LG+ +K + G++ ++ +ID+ + G L A + M A
Sbjct: 238 CALLGALDLGKWIHEYVK-KNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQA 296
Query: 246 IWGSLLAASNIYG 258
W +++ A ++G
Sbjct: 297 -WSAMIVAYAMHG 308
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ M+ YA G Q + +++F M V
Sbjct: 297 WSAMIVAYAMHG-------------------------------QGQDVMSMFEEMARAKV 325
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDEI L L AC+ G V+ G + ++ E YG+ + ++D+ ++G + +A
Sbjct: 326 QPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAY 385
Query: 131 QVFENMKNKSV-ITWTTMIAGLALHG 155
+ + + K I W T+++ + HG
Sbjct: 386 KFIDELPIKPTPILWRTLLSSCSSHG 411
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 212/315 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV GYAK G + AR++F M EK+V+SW+ +I+ YA+ +QP+E + LF +MQ V
Sbjct: 164 TAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVS 223
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDEI ML+ +SACA +G+++ WIH+ + +G I+ + NALIDM++K G + AL +
Sbjct: 224 PDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNM 283
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+VITWT+MIA A+HG G AL +F +M+ V+PN +TF+ +L ACCH GLV
Sbjct: 284 FNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLV 343
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR F M Y IEPK E YGCM+DL+GRA +QEA L+ M N AIWGSLLA
Sbjct: 344 YEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLA 403
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GD+ELGE A + +++L+P++ G Y +LSNI+A G WN + K+R +M+ GV K
Sbjct: 404 ACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHGVSKE 463
Query: 313 PGCSYIEVSKRVHEF 327
G S++E++ VH F
Sbjct: 464 TGYSWLELNCTVHGF 478
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 133/278 (47%), Gaps = 33/278 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YA + AR +F+ M E+++++W ++ Y E + L +M+ V
Sbjct: 32 TALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVV 91
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------- 119
PD++ + LS C + G+ IH+YI+ + L++ALI+M
Sbjct: 92 PDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKI 151
Query: 120 ------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
YAK+GKI A +F +M K V++W+ MI+ A + E L
Sbjct: 152 YSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVL 211
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F++M+ V P+EIT ++++SAC ++G ++ R +I+ +G + +ID+
Sbjct: 212 NLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIV-GNHGFYKILSICNALIDM 270
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ G L A + MP N W S++AA ++GD
Sbjct: 271 FSKCGSLTLALNMFNAMP-RKNVITWTSMIAAFAMHGD 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
+ AL+ YA ++ +A +VF+ M + ++ W M+ RE L + ++M+R+R
Sbjct: 30 VGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSR 89
Query: 172 VKPNEITFIAILSACCHVGLVELGR 196
V P+++ +LS C H + G+
Sbjct: 90 VVPDQVILATVLSTCGHTRHLRSGK 114
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 224/347 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ + GD++ AR LF+ M +++ ++W ++ GY ++ + EA+ LF MQ V
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVA 253
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E+ +++ L+ACAQ+GA+E G W+H+Y+ G+ V L AL+DMY+K G + +++V
Sbjct: 254 VSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEV 313
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M+ +++ TWT+ ++GLA++G+G E L++F RME A ++PN +TF+A+L C GLV
Sbjct: 314 FETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLV 373
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR F+ MK ++ +EP +E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 374 EEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLN 433
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ +V+LG+ A+ L ++E N + +LSNIYA W K+R +M+ GVKKM
Sbjct: 434 ASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKM 493
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IEV +VHEF G SHP + + +L +++ +++ + N
Sbjct: 494 PGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAAN 540
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 218/334 (65%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WN M+ GYA G++ +F+ M E+NV SW LI GY + +E + F+RM VE +
Sbjct: 241 WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGH 300
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P++ ++A LSAC++LGA+++G+W+H Y E G + + N LIDMYAK G I A+
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAV 360
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K +I+W T+I GLA+HG +AL MF RM+ +P+ +TF+ ILSAC H+G
Sbjct: 361 VVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMG 420
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G YF M Y I P+IE YGCM+DLLGRAG L +A +R+MP E +A IW +L
Sbjct: 421 LVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAAL 480
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +Y +VE+ E ALQ LI+LEP+N N+ ++SNIY LGR + +++ MRD G +
Sbjct: 481 LGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFR 540
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS IE + V EF + D H + + +Y++L
Sbjct: 541 KLPGCSVIECNDSVVEFYSLDERHSETESIYRVL 574
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 41/221 (18%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ GY GD+ + R LF+L E++V+ W+ LI+GY + A LF +M
Sbjct: 179 WTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKM----- 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ M W NA+++ YA +G++ +
Sbjct: 234 -PNRDTM----------------SW-----------------NAMLNGYAVNGEVEMFEK 259
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VF+ M ++V +W +I G +GL E L+ F RM V PN+ T +A+LSAC +G
Sbjct: 260 VFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLG 319
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+++G ++ ++ G + + +ID+ + G ++ A
Sbjct: 320 ALDMG-KWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENA 359
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
+++AR LF+ + + N +W + GY Q + + LF + P+ + +
Sbjct: 60 IHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKS 119
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C +L V GE +H ++G + + +LIDMY+K G + A +VF M ++V+ W
Sbjct: 120 CGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVW 179
Query: 145 TTMIAGLALHG---LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
T +I G L G GR D+ ER + + + ++S + R F+
Sbjct: 180 TAIINGYILCGDVVSGRRLFDLAP--ER-----DVVMWSVLISGYIESKNMAAARELFDK 232
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
M +R + + M++ G ++ EK+ MP E N W L+
Sbjct: 233 MPNRDTM-----SWNAMLNGYAVNGEVEMFEKVFDEMP-ERNVFSWNGLIGG 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
I ++ +I A ++F+ + + TW M G +G R+ + +F + R PN
Sbjct: 50 FITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPN 109
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
TF I+ +C + V G + +++G + +ID+ + G +++A K+
Sbjct: 110 CFTFPMIIKSCGKLEGVREGEE-VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVF 168
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 275
M E N +W +++ + GDV G + L L P
Sbjct: 169 GEM-HERNVVVWTAIINGYILCGDVVSG----RRLFDLAP 203
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 224/341 (65%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K G L AR LF + ++V++WT ++ GYAQ+ +EAI LFRRMQ + +K
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + L++C+ ++ G+ IH + G N V L +AL+ MYAK G + A V
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 133 FENMKNKSVITWTTMIAGL-ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++V+ WT +I G A HG REAL+ F +M++ +KP+++TF ++LSAC HVGL
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR++F M YGI+P +E Y C +DLLGRAG+L+EAE ++ MPF ++WG+LL
Sbjct: 468 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ DVE GE A ++++KL+P + G Y LS+IYA GR+ ++ K+R+VM V K
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV +VH F D SHP+ +++Y L K+ Q+K
Sbjct: 588 EPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIK 628
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 142/242 (58%), Gaps = 4/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK GD++ AR +F+ + EKNV++WT LIAGYAQ Q + A+ L MQ V
Sbjct: 187 TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVA 246
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I + L C A+E G+ +H YI Q G + + N+LI MY K G + +A ++
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ ++ V+TWT M+ G A G EA+++F RM++ +KP+++TF ++L++C +
Sbjct: 307 FSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFL 366
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G+R + ++ + Y ++ ++ ++ + + G + +A + +M E N W +++
Sbjct: 367 QEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAII 423
Query: 252 AA 253
Sbjct: 424 TG 425
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 136/242 (56%), Gaps = 4/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ YAK G L +AR +F+ + ++N++SWT +I + ++ EA + M++ K
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ++ L+A ++LG+ +H I + GL + +L+ MYAK G I KA +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K+V+TWT +IAG A G AL++ M++A V PN+ITF +IL C +
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ I++S YG E + +I + + G L+EA KL +P + W +++
Sbjct: 266 EHGKKVHRYIIQSGYGRELWV--VNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMV 322
Query: 252 AA 253
Sbjct: 323 TG 324
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 123/248 (49%), Gaps = 20/248 (8%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
AG+ KV L N+R + L + + EA+ + M ++ +
Sbjct: 5 AGFRKVETLANSRDVSVL----------------CKTGRLKEALGIMNTMILQGTRVYSD 48
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
L CA+L ++E G +H I + G+ L N L+ MYAK G + A +VF+++
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+++++++WT MI EA + M+ A KP+++TF+++L+A + L++LG+
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 197 R-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ + I+++ +EP++ ++ + + G + +A + R+P E N W L+A
Sbjct: 169 KVHMEIVEAGLELEPRVGT--SLVGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYA 225
Query: 256 IYGDVELG 263
G V++
Sbjct: 226 QQGQVDVA 233
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 214/332 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK G + AR +F+ M EK+V+ W+ LI GYA P EA+ +F MQ ENV+
Sbjct: 242 TSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVR 301
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD AM+ SAC++LGA+ELG W ++ + L ALID YAK G + +A +V
Sbjct: 302 PDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEV 361
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ K + + +I+GLA+ G A +F +M + ++P+ TF+ +L C H GLV
Sbjct: 362 FKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLV 421
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF+ M S + + P IE YGCM+DL RAG L EA+ L+R MP EAN+ +WG+LL
Sbjct: 422 DDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++ D +L E L+ LI+LEP NSG+Y +LSNIY+ RW+E+ KIR + G++K+
Sbjct: 482 GCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKL 541
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS++EV VHEF+ GDTSHP ++Y+ L
Sbjct: 542 PGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKL 573
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 144/266 (54%), Gaps = 2/266 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K G L +AR +F+ + EKNV+SWT +I GY + EA+ LFR + ++PD
Sbjct: 143 LVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPD 202
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ L AC+++G + G WI Y+ + G V + +L+DMYAK G + +A +VF+
Sbjct: 203 SFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFD 262
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K V+ W+ +I G A +G+ +EALD+F M+R V+P+ + + SAC +G +EL
Sbjct: 263 GMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALEL 322
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +M + + +ID + G + +A+++ + M + ++ ++++
Sbjct: 323 GNWARGLMDGDEFLSNPVLGTA-LIDFYAKCGSVAQAKEVFKGMR-RKDCVVFNAVISGL 380
Query: 255 NIYGDVELGECALQHLIKLEPHNSGN 280
+ G V ++K+ GN
Sbjct: 381 AMCGHVGAAFGVFGQMVKVGMQPDGN 406
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A +F N+ + TLI G D +A++++ M+ PD L AC +
Sbjct: 54 ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR 113
Query: 88 LGA-VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
L +G +H+ + + G + V + L+ +Y+K+G + A +VF+ + K+V++WT
Sbjct: 114 LPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTA 173
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
+I G G EAL +F + ++P+ T + IL AC VG + GR M+
Sbjct: 174 IICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES- 232
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
G + ++D+ + G ++EA ++ M E + W +L+ Y + + A
Sbjct: 233 GSVGNVFVATSLVDMYAKCGSMEEARRVFDGM-VEKDVVCWSALIQG---YASNGMPKEA 288
Query: 267 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
L +++ N + + YA++G ++ ++
Sbjct: 289 LDVFFEMQREN-----VRPDCYAMVGVFSACSRL 317
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 33/251 (13%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H + + GL+ L N L+ A VF + ++ + T+I G+ +
Sbjct: 23 HCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAF 82
Query: 158 REALDMFSRMERARVKPNEITFIAILSACC------HVGLVELGRRYFNIMKSRYGIEPK 211
R+A+ +++ M + P+ TF +L AC HVGL + + + G +
Sbjct: 83 RDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLS------LHSLVIKTGFDWD 136
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA---SNIYGDVELGECALQ 268
+ ++ L + G+L +A K+ +P E N W +++ S +G+ LG
Sbjct: 137 VFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAIICGYIESGCFGEA-LGLFRGL 194
Query: 269 HLIKLEPHNSGNYAILSNIYAI-------LGRW-----NESGKIRKVMRDMGVKKM-PGC 315
+ L P ++ ++ +YA GRW ESG + V + M C
Sbjct: 195 LEMGLRPD---SFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 316 SYIEVSKRVHE 326
+E ++RV +
Sbjct: 252 GSMEEARRVFD 262
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 219/345 (63%), Gaps = 4/345 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN+MV G + G L+ A LF M +N+I+W ++I G AQ E++ LF MQ+
Sbjct: 195 WNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSD 254
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ VKPD+I + + LSACAQLGA++ G+W+H Y+ + G+ V + AL++MY K G + K
Sbjct: 255 DMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQK 314
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A ++FE M K WT MI+ ALHGLG +A + F ME+A VKPN +TF+ +LSAC H
Sbjct: 315 AFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAH 374
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE GR F++MK Y IEP++ Y CM+D+L RA E+E L+R MP + + +WG
Sbjct: 375 SGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWG 434
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL ++G+VELGE + HLI LEPHN Y +IYA G ++ + +IR +M++
Sbjct: 435 ALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKR 494
Query: 309 V-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ KK+PGCS IE++ V EF AG +S L +L ++ +MK
Sbjct: 495 IEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLVLNGLSNEMK 539
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 147/312 (47%), Gaps = 50/312 (16%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--- 58
+ ++RLLY V ++ G + A +F ++ ++ ++ +I Y M+ ++
Sbjct: 54 YLITRLLY------VCSFSYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHF 107
Query: 59 --AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
A+ L+++M +++ P+ + L C Q G+ IH + ++G V + N+L
Sbjct: 108 CKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSL 167
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTM----------------------------- 147
I +Y G + A +VF+ M V+TW +M
Sbjct: 168 ISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWN 227
Query: 148 --IAGLALHGLGREALDMFSRME---RARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
I GLA G +E+L++F M+ VKP++IT ++LSAC +G ++ G+ +
Sbjct: 228 SIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYL 287
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
+ R GIE + ++++ G+ G +Q+A ++ MP E +A+ W +++ ++G L
Sbjct: 288 R-RNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMP-EKDASAWTVMISVFALHG---L 342
Query: 263 GECALQHLIKLE 274
G A +++E
Sbjct: 343 GWKAFNCFLEME 354
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 228/340 (67%), Gaps = 8/340 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+AGY K G++ A+ +FE M++K+V++WT++I+ Y Q P +A+ LFR M +
Sbjct: 178 WNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGL 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKAL 130
+PD A+++ LSA A LG VE G+W+H Y+ + + +ALIDMY+K G I A
Sbjct: 238 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 297
Query: 131 QVFENMKNKSVI-TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF ++ ++ I W +MI+GLA+HGL REALD+F MER ++PNEITF+ +LS C H
Sbjct: 298 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 357
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+ YF M +Y I P+I+ YGCMIDL GRAG L++A +++ MPFEA+ W +
Sbjct: 358 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 417
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
+L+AS +G +E+G+ A I+L P +S +Y +LSNIYA GRW++ KIR +MR GV
Sbjct: 418 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 477
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY--QILCKI 347
KK+ GCS + V+ +VHEF+ G + D Y Q+L KI
Sbjct: 478 KKIAGCSSMLVNGKVHEFLLG----KELDSSYSGQVLAKI 513
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 43/307 (14%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT+SRL+ + G L+ A ++F + N + LI G++ P E++
Sbjct: 39 FTVSRLI-----AFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLI 93
Query: 62 LFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
L+ RM + E ++ + L AC +L A + G +H + + L + N+++ M
Sbjct: 94 LYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM 153
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG------------------------ 155
Y G+I A +VF+ M N+ V++W +MIAG G
Sbjct: 154 YIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMI 213
Query: 156 -------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+ALD+F M ++P+ +++LSA +G VE G ++ + S I
Sbjct: 214 SAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEG-KWLHAYVSMNKI 272
Query: 209 EPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
E G +ID+ + GY++ A + R + N W S+++ I+G L AL
Sbjct: 273 ELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LAREAL 329
Query: 268 QHLIKLE 274
+++E
Sbjct: 330 DIFVEME 336
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 216/337 (64%), Gaps = 1/337 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++++ YAK G + +AR +F+ M ++N + WT++I+GY Q+ Q EAI LFR MQ+ VK
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + +S+C Q+GA++LG ++H Y + +GL + + N+LIDMY+K G I KA +
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGL 191
F M + +WT +I G A +GL EALD+F++ME V PNEITF+ +L++C H GL
Sbjct: 355 FCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 414
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R+F+ M S YGI P+IE YGCM+DLLGRA L EAE+ ++ MP +A +W SLL
Sbjct: 415 VEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 474
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A G+V L E + + LEP+ G +LS +YA RW ++ K+R + K
Sbjct: 475 FACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTK 534
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PGCS+IEV VHEF AGD SH + + +Y L IN
Sbjct: 535 QPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLGIN 571
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 136/253 (53%), Gaps = 9/253 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ + AR++ + + + +SW T+IAGY PN+A+ F +M
Sbjct: 132 NTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQ 191
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D++ +L AL ACA+ +++G+ H + G + ++LI MYAK G++ A
Sbjct: 192 VMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDAR 251
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M +++ + WT+MI+G G +EA+ +F M+ A VK ++ T ++S+C +G
Sbjct: 252 RIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMG 311
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK----LLRRMPFEANAAI 246
++LG RY + +G+ I +ID+ + G +++A +++R F I
Sbjct: 312 ALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVII 370
Query: 247 WGSLLAASNIYGD 259
G AA+ + G+
Sbjct: 371 MG--FAANGLSGE 381
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D ++ AALS A++ +V +G +H + GL++ + N LI+MY+ A V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 134 ENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
++ ++W T+IAG GL +AL FS+M + +V +++T + L AC +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+++G+ ++ + G E +I + + G +++A ++ MP + NA W S++
Sbjct: 212 MKVGKLCHALLVTN-GFEINCYMGSSLISMYAKCGQVEDARRIFDGMP-DRNAVCWTSMI 269
Query: 252 AASNIYGDVELGE 264
+ G +LG+
Sbjct: 270 S-----GYTQLGQ 277
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 220/338 (65%), Gaps = 7/338 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV GYAK GDL +AR F+ KN + W+ +IAGY+Q ++P E++ LF M V
Sbjct: 427 WTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGV 486
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKIG 127
P E +++ LSAC QL + LG+WIH Y + + I+PL+ NA++DMYAK G I
Sbjct: 487 VPIEHTLVSVLSACGQLTCLNLGDWIHQY---FVVGKIIPLSVTLENAIVDMYAKCGSID 543
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A +VF M +++I+W TMIAG A +G ++A+++F +M +PN ITF+++L+AC
Sbjct: 544 AATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACS 603
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL+ GR YF+ M+ +YGI+P+ Y CM+DLLGR G L+EA KL+ MP + A W
Sbjct: 604 HGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAW 663
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LL A ++G+VEL + +L++L+P +SG Y +L+N A +W++ ++R +M+D
Sbjct: 664 GALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDK 723
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 345
GVKK+PG S IE+ EF+ D SHP + +Y++ C
Sbjct: 724 GVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKLEC 761
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 143/275 (52%), Gaps = 38/275 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA+ G L NAR +F+ ++K+V++WTT+I GYA D EA+ +F M + +V+
Sbjct: 296 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 355
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ ++A +SAC+ +G +E+G+ +H +E+ + + L+NAL+DMY K + A ++
Sbjct: 356 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 415
Query: 133 FENMKNKSVITWTT-------------------------------MIAGLALHGLGREAL 161
F+ M K V +WT+ MIAG + + +E+L
Sbjct: 416 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 475
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCM 218
+F M V P E T +++LSAC + + LG +YF + K I + +
Sbjct: 476 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKI---IPLSVTLENAI 532
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+D+ + G + A ++ MP E N W +++A
Sbjct: 533 VDMYAKCGSIDAATEVFSTMP-ERNLISWNTMIAG 566
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 2/242 (0%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A GDL+ A +F + + N W T+I GY +P A + F M V+ D + +
Sbjct: 202 AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFV 261
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
AL AC Q V GE ++ + + G + + + N LI YA+ G + A QVF+ +K
Sbjct: 262 FALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDK 321
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V+TWTTMI G A H EA+++F M + V+PNE+T IA++SAC +G +E+G+R
Sbjct: 322 DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVH 381
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++ + + + + ++D+ + L +A +L RM + + W S++ GD
Sbjct: 382 EKVEEK-NMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCGD 439
Query: 260 VE 261
+E
Sbjct: 440 LE 441
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 220/334 (65%), Gaps = 1/334 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA+ L A+ +F++M KN +SW LIAGYA+ Q ++A LF M ENVKP
Sbjct: 163 YARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTY 222
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L ACA +G++E G+W+H + ++G + + N L+DMYAKSG I A +VF+ +
Sbjct: 223 SSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAK 282
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V++W +M+ G + HGLG+ AL F M R R+ PN+ITF+ +L+AC H GL++ GR Y
Sbjct: 283 RDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHY 342
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F++MK +Y +EP+I Y M+DLLGRAG+L A + + MP + AA+WG+LL A ++
Sbjct: 343 FDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHK 401
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
++ELG A + + +L+ H G + +L NIYA+ GRWN++ K+RK+M++ GVKK P CS++
Sbjct: 402 NMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWV 461
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E+ VH FVA D +HP ++ + +I+ ++K
Sbjct: 462 EMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 153/258 (59%), Gaps = 7/258 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YAK GDL AR LF+ M+ ++V++WT LI GY+Q D+P +A+ L M +K
Sbjct: 54 NTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113
Query: 73 PDEIAMLAALSACAQLGAVEL--GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P++ + + L A + +G+ ++ G +H +YG ++ V ++ A++DMYA+ + +A
Sbjct: 114 PNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ 173
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M +K+ ++W +IAG A G G +A +FS M R VKP T+ ++L AC +G
Sbjct: 174 LIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMG 233
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E G ++ + + ++G + ++D+ ++G +++A+K+ R+ + + W S+
Sbjct: 234 SLEQG-KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSM 291
Query: 251 LAASNIYGDVELGECALQ 268
L + +G LG+ ALQ
Sbjct: 292 LTGYSQHG---LGKVALQ 306
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ L R+ N EI L C L + G+ IH + + + N L+++
Sbjct: 1 MELIRQQCKNNAGAREICH-TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
YAK G + A ++F+ M ++ V+TWT +I G + H ++AL + M R +KPN+ T
Sbjct: 60 YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119
Query: 180 IAILSACCHVGLVE-LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++L A VG + L R + + RYG + + ++D+ R +L+EA+ + M
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
N W +L+A G + C ++++
Sbjct: 180 -VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLR 212
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YAK G + +A+ +F+ + +++V+SW +++ GY+Q A+ F M +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I L L+AC+ G ++ G + +++Y + + ++D+ ++G + +A+Q
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 133 FENMKNK-SVITWTTMIAGLALH 154
M K + W ++ +H
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMH 400
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 225/337 (66%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L AR +F M K+ +SW+T+I G+A EA + FR +Q + +
Sbjct: 206 WNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGM 265
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E ++ LSACAQ GA+E G+ +H +IE+ GL IV +NNAL+D Y+K G + A
Sbjct: 266 RPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQL 325
Query: 132 VFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE + N +++++WT+M+A LA+HG G EA+ +F +ME + ++P+EI FI++L AC H G
Sbjct: 326 VFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAG 385
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G YF+ MK Y IEP IE YGCM+DL GRAG LQ+A + + +MP A IW +L
Sbjct: 386 LVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTL 445
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +++GDV+L E + L +L+P+NS ++ +LSN YA+ G+W ++ +R+ M + +
Sbjct: 446 LGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRIT 505
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K PG S IEV K ++ F+AG + + Y+ L +I
Sbjct: 506 KTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEI 542
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALS 83
L+ A LF +V TLI G + D+P +++ F M+ + P D + +
Sbjct: 55 LDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVK 114
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A A L +V +G +H +GL+T + + LI MY + G +G A +VF+ M + I
Sbjct: 115 AAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIA 174
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W M+ G + ++F M N +++ +L+ G +EL R F M
Sbjct: 175 WNAMVTACCRGGDMKGGRELFDLMPVR----NLMSWNVMLAGYTKAGELELAREMFLEMP 230
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR---RMPFEANAAIWGSLLAASNIYGDV 260
+ + + MI GY +EA R R N +L+A G +
Sbjct: 231 MKDDV-----SWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGAL 285
Query: 261 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E G+ L I+ SG I+S A+L +++ G +
Sbjct: 286 EFGK-ILHGFIE----KSGLAWIVSVNNALLDTYSKCGNV 320
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 229/342 (66%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV+GY K GDL AR +F+ M KN+++WT +++ AQ +EA LF +M+ +V
Sbjct: 136 WSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASV 195
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALIDM+ K G + +A
Sbjct: 196 ELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADY 255
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ K ++W ++I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 256 VFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMG 315
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ GRR+F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP+E N IWGSL
Sbjct: 316 FVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSL 375
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 376 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 435
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 436 KTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 477
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 112/265 (42%), Gaps = 60/265 (22%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+++ + G + NALID Y+K+G A +VF+ M + V++W T +A +
Sbjct: 27 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM----- 81
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
V+ E+ + R+ F+ M E +
Sbjct: 82 ---------------VREGELAGV---------------RKLFDEMP-----EKDTVSWN 106
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
++D +AG ++ A +L +RMP E N W ++++ GD+E+ K+
Sbjct: 107 TILDGYTKAGEVEAAFELFQRMP-ERNVVSWSTMVSGYCKKGDLEMARVIFD---KMPSK 162
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCS---YIEVSKRVH 325
N + I+ + A G +E+GK+ M++ V+ + C+ + + KR+H
Sbjct: 163 NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIH 222
Query: 326 EFVA----GDTSHPDFDRLYQILCK 346
+V G ++H + L + CK
Sbjct: 223 RYVRKRNLGRSTHV-CNALIDMFCK 246
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 224/346 (64%), Gaps = 2/346 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++++ YAK G + +AR +F M E+NV+ WT++I+GY Q+ + EA+ LFR MQ+ +K
Sbjct: 235 SSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMK 294
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + +S+CAQ+GA++LG ++H Y + +GL + + N+LIDMY+K G I KA ++
Sbjct: 295 VDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKAHEI 354
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F + + V +WT MI G ++GL EALD+F++ME +V PNE+TF+ +L++C H GL
Sbjct: 355 FCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGL 414
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M Y + P+IE YGCM+DLLGRA L EAE+ ++ MP + +W SLL
Sbjct: 415 VEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLL 474
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A G+V L E + +++LEP + +LSN+YA RW + ++R M + + K
Sbjct: 475 FACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMDNSRMSK 534
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS+IEV VHEF AGD SH + + +Y IL I+ ++ AE L
Sbjct: 535 QPGCSFIEVDGCVHEFFAGDESHLETEAIYNILLGIS-ELLVAESL 579
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK--NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N+++ Y+ AR + + + + +SW T+I+GY + PN+A+ F +M E
Sbjct: 132 NSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQ 191
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D++ +L AL A A+ G V++G H+ + G + ++LI MYAK G + A
Sbjct: 192 VTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDAR 251
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF M ++V+ WT+MI+G G +EA+++F M+ +K ++ T ++S+C +G
Sbjct: 252 KVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMG 311
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK----LLRRMPFEANAAI 246
++LG RY + +G+ ++ +ID+ + G + +A + L +R F A I
Sbjct: 312 ALDLG-RYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMI 370
Query: 247 WG 248
G
Sbjct: 371 MG 372
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D ++ A SA ++L +V +G +H+ + GL + + N+LI+MY+ A
Sbjct: 89 VTLDNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATAR 148
Query: 131 QVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
QV ++ + ++W T+I+G G+ +AL F +M + +V +++T + L A
Sbjct: 149 QVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAK 208
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V++GR +++ G +I + + G +++A K+ M E N W
Sbjct: 209 AGKVKVGRLCHSLVVVN-GAGINCYMGSSLISMYAKCGLVEDARKVFHGM-HERNVVCWT 266
Query: 249 SLLAA 253
S+++
Sbjct: 267 SMISG 271
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WNT++ GYA +GD+ +F+ M E+NV SW LI GYAQ + +E + F+RM E +
Sbjct: 121 WNTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 180
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
V P++ + LSACA+LGA + G+ +H Y E G N + V + NALIDMY K G I A
Sbjct: 181 VFPNDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIA 240
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++VF+ +K + +I+W TMI GLA HG G EALD+F M+ + P+++TF+ +L AC H+
Sbjct: 241 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHM 300
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YFN M + + I P+IE GC++DLL RAG+L +A + + +MP +A+A IW +
Sbjct: 301 GLVEDGLAYFNSMFTDFSITPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 360
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS +Y V+ GE AL+ LIKLEP N N+ +LSNIY GR++++ +++ MRD G
Sbjct: 361 LLGASKVYKKVDTGELALKELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGF 420
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK G S+IE + +F + HP + L +IL
Sbjct: 421 KKEAGISWIETDDGLVKFYSSGEKHPRTEELQRIL 455
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M+ GY DL +AR F+L E++++ W T++AGY +M EA +LF +M +V
Sbjct: 59 WTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCRDV 118
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N +++ YA G + +
Sbjct: 119 MS----------------------W-----------------NTVLEGYANIGDMEACER 139
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VF+ M ++V +W +I G A +G E L F RM + V PN+ T +LSAC +G
Sbjct: 140 VFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLG 199
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+ G+R ++ + + +ID+ G+ G ++ A ++ +
Sbjct: 200 AFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 245
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 223/347 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA G ++ A +F+ M E + SW+T+++GYAQ Q EA+ LFR MQ ENV
Sbjct: 146 NGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVS 205
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + C LGA++LG+W+H+Y+++ G+ V L AL+ MY+K G + AL+V
Sbjct: 206 SDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 265
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V W+TMIAG A+HG G +AL +F M+R++ PN +TF ++LSAC H GLV
Sbjct: 266 FQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLV 325
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G + F M + Y I P+I+ YGCM+DL RAG + A K ++ MP E N +W +LL
Sbjct: 326 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 385
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +G +LGE + ++KL+P + NY ++SN+YA LGRW+ ++R +M+D KK
Sbjct: 386 ACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQ 445
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S IE++ VH+F+ GD SHP+ +++Y +L ++ ++K H+ +
Sbjct: 446 HGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNS 492
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + A +F N+ W T+I GY+ D P AI L+R M + + P+ L
Sbjct: 55 GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC +L + G+ +H+ I + GL+ PL N LI +YA G + A +F+ M
Sbjct: 115 KACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSA 174
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W+TM++G A +G EAL +F M+ V + T +++ C +G ++LG+ + M
Sbjct: 175 SWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM 234
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
+ G++ + ++ + + G L A K+ + M E + W +++A I+G
Sbjct: 235 -DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTMIAGYAIHGH--- 289
Query: 263 GECALQ 268
GE ALQ
Sbjct: 290 GEKALQ 295
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 71 VKP--DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--SGKI 126
+KP D+ +++AA+ C ++G ++ I ++ + L L + LI+ A SG +
Sbjct: 1 MKPMLDQGSLVAAIKRCTRVGDLKA---IQAHMVRANLTQDTFLTSKLIESSAVTLSGHV 57
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A ++F + ++ W T+I G ++ A+ ++ M + PN TF +L AC
Sbjct: 58 AYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC 117
Query: 187 CH-VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C + L E + I+K G++ + +I L G + A + MP E ++A
Sbjct: 118 CKLLRLCEGQELHSQIVK--VGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPDSA 174
Query: 246 IWGSLLAA 253
W ++++
Sbjct: 175 SWSTMVSG 182
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/342 (45%), Positives = 232/342 (67%), Gaps = 4/342 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
T++ YAK+GDL+ A+ LF+ M + ++ SW LIAG+AQ +P +AI F+RM+V+ N+
Sbjct: 142 TTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNL 201
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + + AL AC+QLGA++ GE +H YI + L++ V + N +IDMYAK G + KA
Sbjct: 202 RPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYW 261
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFENM+ +KS+ITW TMI A+HG G +ALD+F ++ R+ + P+ ++++A+L AC H G
Sbjct: 262 VFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAG 321
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G + FN M R G+EP I+ YG M+DLLGRAG L+EA ++ +PF N +W +L
Sbjct: 322 LVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTL 379
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A YGDVE+ E A + L+++ + G + +LSN+YA RW++ G++R MR VK
Sbjct: 380 LGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVK 439
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PG SYIE+ ++++FV GD SH +Y L +IN ++K
Sbjct: 440 KTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIK 481
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIA 77
+ GDL+ A +F + + W +I G A P A+ +R M N + D +
Sbjct: 46 SSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALT 105
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
AL ACA+ A +H+ + ++G N V L L+D YAK G + A ++F+ M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMP 165
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGR 196
+ +W +IAG A +A+ F RM+ ++PN +T L AC +G ++ G
Sbjct: 166 QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 197 RYFNIMKSRYGIEPKIEQ----YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+Y +E K++ +ID+ + G + +A + M + + W +++
Sbjct: 226 SV-----HKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIM 280
Query: 253 ASNIYGD 259
A ++GD
Sbjct: 281 AFAMHGD 287
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 226/345 (65%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
MV+GY+K G L++A+ +F+ +K+++ WTT+I+ Y + D P EA+ +F M +KPD
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++M + +SACA LG ++ +W+H+ I GL + + +NNALI+MYAK G + VFE
Sbjct: 344 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE 403
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++V++W++MI L++HG +AL +F+RM++ V+PNE+TF+ +L C H GLVE
Sbjct: 404 KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 463
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ F M Y I PK+E YGCM+DL GRA L+EA +++ MP +N IWGSL++A
Sbjct: 464 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 523
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+G++ELG+ A + +++LEP + G ++SNIYA RW + IR+VM + V K G
Sbjct: 524 RIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKG 583
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
S I+ + + HEF+ GD H + +Y L ++ ++K A ++ +
Sbjct: 584 LSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 2 FTLSRLLYKFWNT-MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
F ++ L F T + YA G +N AR +F+ M+ ++V++W T+I Y + +EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LF M+ NV PDE+ + +SAC + G + I+ ++ + + L AL+ MY
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 121 A-------------------------------KSGKIGKALQVFENMKNKSVITWTTMIA 149
A K G++ A +F+ + K ++ WTTMI+
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
+EAL +F M + +KP+ ++ +++SAC ++G+++ + + + G+E
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLE 376
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++ +I++ + G L + +MP N W S++ A +++G+
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G L+ R +FE M +NV+SW+++I + + ++A++LF RM+ ENV+
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 73 PDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ + L C+ G VE G+ I + ++Y + + ++D++ ++ + +AL+
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 132 VFENMKNKS-VITWTTMIAGLALHG 155
V E+M S V+ W ++++ +HG
Sbjct: 503 VIESMPVASNVVIWGSLMSACRIHG 527
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
I + + ++ +P I ++R++ + D+ + L L A +++ A+ G +H
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ + +DMYA G+I A VF+ M ++ V+TW TMI GL EA
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F M+ + V P+E+ I+SAC G + R + + + ++
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVT 255
Query: 221 LLGRAGYLQEAEKLLRRM 238
+ AG + A + R+M
Sbjct: 256 MYAGAGCMDMAREFFRKM 273
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 224/349 (64%), Gaps = 5/349 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K GDL +AR +F+ M K+V++W +I GYAQ NEAI LF M+
Sbjct: 268 SALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPH 327
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + M+ LSAC+ +GA++LG+W+ + + GL V + +ALIDMYAK G + A++V
Sbjct: 328 PDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRV 387
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER--ARVKPNEITFIAILSACCHVG 190
FE+M +K+ ++W MI+ LA HG +EAL +F RM + V+PN+ITFI +LSAC H G
Sbjct: 388 FESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAG 447
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR+ F M +G+ PK+E Y CM+DL RAG L EA L+++MP + + + GSL
Sbjct: 448 LVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSL 507
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + ++GE +Q +++E NSGNY I S IYA + RW++S K+R +MR GV
Sbjct: 508 LGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVS 567
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
K PGCS+I++ VHEF AGD+ H +YQ+L N +MK ++ N
Sbjct: 568 KTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLL---NEEMKREGYIPN 613
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 147/249 (59%), Gaps = 2/249 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ G++ AR +F+ M +++++SW ++I+GY++M EAI LF M+ E +
Sbjct: 167 HSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFE 226
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ +++ L AC LG + LG W+ ++ + + + +ALIDMY K G + A +V
Sbjct: 227 PDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRV 286
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M NK V+TW +I G A +G EA+ +F+ M A P+ +T I +LSAC +G +
Sbjct: 287 FDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGAL 346
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG ++ S G++ + +ID+ + G L +A ++ MP + N W ++++
Sbjct: 347 DLG-KWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHK-NEVSWNAMIS 404
Query: 253 ASNIYGDVE 261
A +G +
Sbjct: 405 ALAFHGQAQ 413
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 126/246 (51%), Gaps = 11/246 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENV 71
N +++ + DL A +F +T+ N+ ++ ++ G A + + + L+ +++ +
Sbjct: 65 NFLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGL 124
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + AC + + G+ H + + GL+ +N++LI MYA+ G++G A +
Sbjct: 125 KANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARK 184
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++ +++W +MI+G + G +EA+ +F M +P+E+T +++L AC +G
Sbjct: 185 VFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGD 244
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCM----IDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ LGR + +E K+E M ID+ G+ G L A ++ MP + W
Sbjct: 245 LGLGRWV-----EGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMP-NKDVVTW 298
Query: 248 GSLLAA 253
+++
Sbjct: 299 NAIITG 304
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 241/360 (66%), Gaps = 4/360 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M ++ +K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIK 219
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ LSACA++GA+ LG+ H Y+ + GL + +N L+D+YA+ G++ +A +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F+ M +K+ ++WT++I GLA++GLG+EA+++F ME + + P EITF+ IL AC H G+
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGM 339
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M Y IEP+IE +GCM+DLL RAG +++A + + +MP + N IW +LL
Sbjct: 340 VKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GV+K
Sbjct: 400 GACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRK 459
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
+PG S +EV RVHEF+ GD SHP D +Y L ++ +++ + + N + V E +
Sbjct: 460 VPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEE 519
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 131/237 (55%), Gaps = 6/237 (2%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWI 97
NV W TLI GYA++ A++L+R M+ V+PD L A ++ V LGE I
Sbjct: 84 NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H+ + + G +++ + N+L+ +YA G + A +VF+ M K ++ W ++I G A +G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL +++ M+ +KP+ T +++LSAC +G + LG+R F++ + G+ +
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKR-FHVYMIKVGLTRNLHSSNV 262
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
++DL R G ++EA+ L M + N+ W SL+ + G LG+ A++ +E
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---LGKEAIELFKNME 315
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 211/333 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV GY+K GD++ AR LF+ M KN++ WT +I+GYA+ +AI L+ +M+ +
Sbjct: 248 WSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGL 307
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D+ +++ LSACA G + LG+ +H IE+ P++NALIDMYAK G + AL
Sbjct: 308 KFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALS 367
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K V++W +I GLA+HG G +AL +FSRM+ P+++TF+ +L AC H G
Sbjct: 368 IFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGF 427
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF+ M+ YG+ P++E YGCM+DLLGR G L+EA +L+ MP E NA IWG+LL
Sbjct: 428 VDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 487
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ L E L+K E +SGN ++LSNIYA G W+ IR M+ ++K
Sbjct: 488 GACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQK 547
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV VHEF D SHP DR+Y+ +
Sbjct: 548 PSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 580
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A ++ + A +F + + +V+ + TLI + + +P A ++F MQ V D
Sbjct: 55 LIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCAD 114
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--KIGKALQV 132
L AC+ V + E IH +E+ G + + N+LID Y K G + A +V
Sbjct: 115 NFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKV 174
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
FE M + ++W +MI GL G EA +F M ER V N IL G
Sbjct: 175 FEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWN-----TILDGYVKAGE 229
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ F M +R + + M+ +AG + A L +MP + N W ++
Sbjct: 230 MNAAFELFEKMPAR-----NVVSWSTMVLGYSKAGDMDMARILFDKMPVK-NLVPWTIMI 283
Query: 252 AA 253
+
Sbjct: 284 SG 285
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 229/342 (66%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV+GY K GDL AR +F+ M KN+++WT +++ AQ +EA LF +M+ +V
Sbjct: 259 WSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASV 318
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALIDM+ K G + +A
Sbjct: 319 ELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADY 378
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ K ++W ++I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 379 VFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMG 438
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ GRR+F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP+E N IWGSL
Sbjct: 439 FVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSL 498
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 499 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 558
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 559 KTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 600
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 113/265 (42%), Gaps = 60/265 (22%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+++ + G + NALID Y+K+G A +VF+ M + V++W T +A +
Sbjct: 150 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM----- 204
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
V+ E+ + R+ F+ M + + +
Sbjct: 205 ---------------VREGELAGV---------------RKLFDEMPEKDTV-----SWN 229
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
++D +AG ++ A +L +RMP E N W ++++ GD+E+ K+
Sbjct: 230 TILDGYTKAGEVEAAFELFQRMP-ERNVVSWSTMVSGYCKKGDLEMARVIFD---KMPSK 285
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCS---YIEVSKRVH 325
N + I+ + A G +E+GK+ M++ V+ + C+ + + KR+H
Sbjct: 286 NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIH 345
Query: 326 EFVA----GDTSHPDFDRLYQILCK 346
+V G ++H + L + CK
Sbjct: 346 RYVRKRNLGRSTHV-CNALIDMFCK 369
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 223/341 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T+V YAK G + AR++F+ M EK++++W+T+I GYA P E I LF +M EN+K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ +++ LS+CA LGA++LGEW + I+++ T + + NALIDMYAK G + + +V
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++ I+GLA +G + + +F + E+ + P+ TF+ +L C H GL+
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+FN + Y ++ +E YGCM+DL GRAG L +A +L+ MP NA +WG+LL+
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ D +L E L+ LI LEP N+GNY LSNIY++ GRW+E+ ++R +M G+KK+
Sbjct: 491 GCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKI 550
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PG S+IE+ +VHEF+A D SHP D++Y L + +M+
Sbjct: 551 PGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 138/240 (57%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y+ G LN+A LF+ + +++V++WT L +GY + EAI LF++M VK
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSAC +G ++ GEWI Y+E+ + + L+++YAK GK+ KA V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M K ++TW+TMI G A + +E +++F +M + +KP++ + + LS+C +G +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE----ANAAIWG 248
+LG +++ R+ + +ID+ + G + ++ + M + NAAI G
Sbjct: 330 DLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 16/277 (5%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
LF N+ + +LI G+ +E + LF ++ + L AC + +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
+LG +H+ + + G N V +L+ +Y+ SG++ A ++F+ + ++SV+TWT + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G REA+D+F +M VKP+ + +LSAC HVG ++ G I+K +E
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW---IVKYMEEMEM 243
Query: 211 KIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGD--VELGE 264
+ + +++L + G +++A + M E + W +++ ASN + +EL
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 265 CALQHLIKLEPHNSGNYAILSNIYAI----LGRWNES 297
LQ L+P LS+ ++ LG W S
Sbjct: 303 QMLQE--NLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 222/352 (63%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN ++AGY K G ++ A A+FE M +N++SWTT+I+GY+Q +A++LF M E+
Sbjct: 203 WNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS 262
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+P+ + +++ L ACAQL +E G IH + GLN+ + AL MYAK G + A
Sbjct: 263 GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDA 322
Query: 130 LQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
F+ N K++I W TMI A +G G +A+ F M +A ++P++ITF +LS C
Sbjct: 323 RNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCS 382
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV++G +YFN M + Y I P++E Y C+ DLLGRAG L EA KL+ MP A +IW
Sbjct: 383 HSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIW 442
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLLAA + ++E+ E A + L LEP N+GNY +LSN+YA GRW E K+R +++
Sbjct: 443 GSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 502
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G KK PGCS+IE++ + H F+ GDTSHP +Y L + +MK A + +
Sbjct: 503 GTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPD 554
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 41/249 (16%)
Query: 44 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 103
+ ++A YA + ++++F N D L + +L +V +G+ +H I +
Sbjct: 109 SKMVAFYASSGDIDSSVSVF------NGIGDYFTFPFVLKSSVELLSVWMGKCVHGLILR 162
Query: 104 YGLNTIVPLNNALIDMYAKSGKI---GK----------------------------ALQV 132
GL + + +LI +Y K G+I GK AL +
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 222
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
FE M +++++WTTMI+G + GL ++AL +F M E + V+PN +T +++L AC +
Sbjct: 223 FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 282
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGS 249
+E GR+ + + R G+ + + + G L +A ++ E N W +
Sbjct: 283 TLERGRQ-IHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNT 341
Query: 250 LLAASNIYG 258
++ A YG
Sbjct: 342 MITAYASYG 350
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 225/344 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NTM+ G + G + AR +F+ M E + +SWT LI G + + +EAI F M ++ V
Sbjct: 140 YNTMITGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGV 199
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++AA+SACA++GA+ LG W+H + + L + + N+LIDMYA+ G++ A Q
Sbjct: 200 EPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQ 259
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M+N++V++W +MI G A +G +A++ F M R +P+ +TF +L+AC H GL
Sbjct: 260 VFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGL 319
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RY+ M++ +GI ++E YGC++DLLGRAG L EA ++ MP N + G+LL
Sbjct: 320 TDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALL 379
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV++ E +QHL++ +P NY +LSNIYA G+W+ +GK+R +M+ GVKK
Sbjct: 380 AGCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKK 439
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S +E+ VHEFV GD SHP D ++ +L ++ +M E
Sbjct: 440 RPGRSAVEIDGDVHEFVCGDRSHPQADEVFDMLGLLSHEMAGRE 483
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 37/236 (15%)
Query: 39 NVISWTTLIAGYA-QMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGE- 95
+V+SWT IA A + D P A L + P+++ +L LSACA + L
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARP 89
Query: 96 --WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
+ + + + L L Y S ALQ+F +M +S++T+ TMI GL
Sbjct: 90 LALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMR 149
Query: 154 HGL-----------------------------GR--EALDMFSRMERARVKPNEITFIAI 182
+GL GR EA+D F M V+P+ +T +A
Sbjct: 150 NGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAA 209
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+SAC VG + LG + + + +R +E I +ID+ R G ++ A ++ M
Sbjct: 210 ISACAEVGALGLG-MWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSM 264
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 228/358 (63%), Gaps = 7/358 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + ++ A +LF M EKN ISWTT+I GY +M + +EA L +M N
Sbjct: 154 WNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN- 212
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ LS+CA L A+++G+ +H + + G T + ++NALI MYAK G I A
Sbjct: 213 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAEL 272
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ + V++W ++IA AL+G GREAL +F +ME V P+E+TF+ ILSAC HVGL
Sbjct: 273 LFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGL 332
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G + F M Y IEP E Y CM+DLLGRAG L+EA +L+R M ANA IWG+LL
Sbjct: 333 IDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL 392
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G++EL + A + L++ EPH + NY +LSN+ A GRW+E ++R++M++ G +K
Sbjct: 393 GACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEK 452
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PG S+IE+ RVH F++ D +HP L IL + H++N LE DV
Sbjct: 453 QPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTA------HMRNTGDMPLELDV 504
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY + G++ FE M E++V+SW ++ G+ ++ N + F ++
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP---- 116
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ ++ + L A+ G + +Q + +V NA+I Y ++ + +A+
Sbjct: 117 NPNTVSWVTMLCGFARFGKIAEAR---RLFDQMPIRNVVAW-NAMIAAYVQNCHVDEAIS 172
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K+ I+WTT+I G G EA + ++M R KP++ TF LS+C H+
Sbjct: 173 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY-RNKPDQSTFACGLSSCAHLAA 231
Query: 192 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+++G++ +MKS Y + + +I + + G + AE L + + + W SL
Sbjct: 232 LQVGKQLHQLVMKSGYATDLFVS--NALITMYAKCGSISSAELLFKDID-HFDVVSWNSL 288
Query: 251 LAASNIYGDVELGECALQHLIKLE 274
+AA + G+ G AL+ K+E
Sbjct: 289 IAAYALNGN---GREALKLFHKME 309
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 15 MVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
M+ Y + G+L AR LF L+ K N + ++AGYA+ Q +EA LF M +
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK---- 56
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D ++ + L+ + G + LG + E+ +V N ++D + + G + + + F
Sbjct: 57 DLVSWNSMLTGYTRNGEMRLGL---QFFEEMAERDVVSW-NLMVDGFVEVGDLNSSWEFF 112
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLV 192
E + N + ++W TM+ G A G EA +F +M R V N + IA CH V
Sbjct: 113 EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAM--IAAYVQNCH---V 167
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+ F M + I + +I+ R G L EA +LL +MP+
Sbjct: 168 DEAISLFMEMPEKNSIS-----WTTVINGYVRMGKLDEARQLLNQMPY 210
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 224/357 (62%), Gaps = 2/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YAK G L ++ +F MT ++++SW+T+IAGY Q +EA L M++E K
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPK 416
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P E A+ + LSAC + +E G+ +H Y+ GL + +ALI+MY K G I +A ++
Sbjct: 417 PTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +N +++WT MI G A HG RE +D+F ++ R ++P+ +TFI +LSAC H GLV
Sbjct: 477 FDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLV 536
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG YFN M +Y I P E YGCMIDLL RAG L +AE ++ MPF + +W +LL
Sbjct: 537 DLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLR 596
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GDVE G + +++LEP+ +G + L+NIYA G+W E+ IRK+M+ GV K
Sbjct: 597 ACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKE 656
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PG S+I+V V FVAGD SHP + +Y +L + + + A+ +Q +G L D+
Sbjct: 657 PGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQE--TGFLPYDL 711
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 140/265 (52%), Gaps = 12/265 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N + K G L NAR +F+ M++K+ ISWTTLI+GY + +EA+ LF+ M+VE+ +
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D + A AC V GE +H Y + GL V + +AL+DMY K+GKI + +
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++V++WT +I GL G +EAL FS M R+RV+ + TF L AC G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ GR + MK + + + + + + G L+ L +M + W ++
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTI 289
Query: 251 LAASNIYGDVELG--ECALQHLIKL 273
+ V++G ECA+Q I++
Sbjct: 290 ITTL-----VQMGQEECAVQAFIRM 309
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+ Y K G L LFE M+ ++V+SWTT+I QM Q A+ F RM+ +V
Sbjct: 256 NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVS 315
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A +S CA L +E GE +H I GL + + N+++ MYAK G++ + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + +++W+T+IAG G EA ++ S M KP E ++LSAC ++ ++
Sbjct: 376 FHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E G++ + S G+E +I++ + G ++EA ++
Sbjct: 436 EHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G + R +F M +NV+SWT +I G + EA+ F M V+ D
Sbjct: 161 YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL ACA GA+ G IH + G + + N L MY K GK+ L +FE M
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V++WTT+I L G A+ F RM + V PNE TF A++S C ++ +E G +
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
++ G+ + ++ + + G L + + M + W +++A
Sbjct: 341 HALIL-HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIA 392
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 81 ALSACAQLGAVE-----LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
A + C L +E L + IH +I Q T +P +N + K+G +G A ++F+
Sbjct: 20 ASTECIDLQVLERSNDNLSQNIH-FISQ----TDLPESNKQLKELVKTGHLGNARRMFDK 74
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERA---RVKPNEITFIAILS--ACCHVG 190
M K I+WTT+I+G EAL +F M R+ P FI L+ AC
Sbjct: 75 MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNS 130
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G + + G+ + ++D+ + G + E ++ MP N W ++
Sbjct: 131 DVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAI 188
Query: 251 L 251
+
Sbjct: 189 I 189
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 224/351 (63%), Gaps = 6/351 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YAK+G L++AR+LF+ + K++I W ++ GY Q +P+EA+ LFRRM V+
Sbjct: 197 TAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVE 256
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI---VPLNNALIDMYAKSGKIGKA 129
PDE++++ ALSA AQLG E G W+H+++ + + ALIDMY K G + A
Sbjct: 257 PDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDA 316
Query: 130 LQVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+ VF ++ ++ ++ W M+ G A+HG REAL F ++ + P +ITFI +L+AC
Sbjct: 317 VAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACS 376
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAI 246
H GLV+ GR F M YGIEPK+E YGCM+DLLGRAG ++EA +L++ M + +A +
Sbjct: 377 HSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVM 436
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W SLLAA ++ ++ELG+ HL+ NSG Y +LSN+YA G W E G++R +MR
Sbjct: 437 WASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRA 496
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
G++K PGCS +EV +RV EFVAGD SHP +Y L ++NG + H+
Sbjct: 497 SGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHV 547
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 38/248 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIA 77
YA G L+ A AL + + +T+ I ++ + A+ L M + + + P
Sbjct: 72 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHT 131
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------------ 119
+ A+L AC G + +G +H Y + L+ + AL+ M
Sbjct: 132 LSASLPAC---GGLAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQ 188
Query: 120 --------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
YAK G + A +F+ + +K +I W M+ G HG EAL +F
Sbjct: 189 PDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFR 248
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGR--RYFNIMKSRYGIEPKIEQYGCMIDLLG 223
RM R+ V+P+E++ + LSA +G E GR F S + +ID+
Sbjct: 249 RMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYY 308
Query: 224 RAGYLQEA 231
+ G L++A
Sbjct: 309 KCGSLEDA 316
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 222/352 (63%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN ++AGY K G ++ A A+FE M +N++SWTT+I+GY+Q +A++LF M E+
Sbjct: 240 WNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS 299
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+P+ + +++ L ACAQL +E G IH + GLN+ + AL MYAK G + A
Sbjct: 300 GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDA 359
Query: 130 LQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
F+ N K++I W TMI A +G G +A+ F M +A ++P++ITF +LS C
Sbjct: 360 RNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCS 419
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV++G +YFN M + Y I P++E Y C+ DLLGRAG L EA KL+ MP A +IW
Sbjct: 420 HSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIW 479
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLLAA + ++E+ E A + L LEP N+GNY +LSN+YA GRW E K+R +++
Sbjct: 480 GSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 539
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G KK PGCS+IE++ + H F+ GDTSHP +Y L + +MK A + +
Sbjct: 540 GTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPD 591
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
MVA YA GD++++ ++F + E + + + ++I YA+ + + M D
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGD 170
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLN--------------------------- 107
L + +L +V +G+ +H I + GL
Sbjct: 171 YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 230
Query: 108 --TIVPLN--NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
TI ++ NAL+ Y KSG I AL +FE M +++++WTTMI+G + GL ++AL +
Sbjct: 231 NMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 290
Query: 164 FSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
F M E + V+PN +T +++L AC + +E GR+ + + R G+ + +
Sbjct: 291 FDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQ-IHELACRMGLNSNASVLIALTAM 349
Query: 222 LGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAASNIYG 258
+ G L +A ++ E N W +++ A YG
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L ++LG +H ++ GL + + ++ YA SG I ++ VF + S + + +M
Sbjct: 83 LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I A +G + + M + TF +L + + V +G+ ++ R G
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLIL-RIG 201
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
++ + +I L G+ G + +A K+ M + + W +LLA G + + AL
Sbjct: 202 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLAGYTKSGCI---DAAL 257
Query: 268 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKI--RKVMRDMGVKK--------MPGC-- 315
++ N ++ + + Y+ G ++ + V D GV+ +P C
Sbjct: 258 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 317
Query: 316 -SYIEVSKRVHEF 327
S +E +++HE
Sbjct: 318 LSTLERGRQIHEL 330
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 217/334 (64%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GYA G++ +FE M +NV SW LI GY + EA+ F+RM V+ V
Sbjct: 90 WNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGV 149
Query: 72 K-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P++ ++A LSAC++LG +E+G+W+H Y + G + + NALIDMYAK G I KAL
Sbjct: 150 VVPNDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKAL 209
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ + K +ITW T+I LA+H +AL +F M+RA +P+ +TF+ ILSAC H+G
Sbjct: 210 DVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMG 269
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV G +F M Y I P+IE YGCM+DLLGRAG + +A ++R+MP E + IW +L
Sbjct: 270 LVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAAL 329
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A Y +VE+ E ALQ LI+LEP+N GN+ +LSNIY LGR + +++ MRD G +
Sbjct: 330 LGACRXYKNVEMAELALQRLIELEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFR 389
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS I + V EF + D HP+ D +Y+ L
Sbjct: 390 KVPGCSVIGCNDSVVEFYSLDERHPETDSIYRAL 423
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 41/221 (18%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +VA + D+ +AR LF+L + +V+ W +++GY ++ A LF RM
Sbjct: 28 WTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIELGDMVAARELFDRM----- 82
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD ++ W N ++ YA +G++ ++
Sbjct: 83 -PD----------------CDVMSW-----------------NTVLSGYANNGEVELFVK 108
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VFE M ++V +W +I G +GL +EAL+ F RM V PN+ T +A+LSAC +G
Sbjct: 109 VFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLG 168
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+E+G ++ ++ G + + +ID+ + G +++A
Sbjct: 169 DLEIG-KWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKA 208
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 229/342 (66%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV+GY K GDL AR +F+ M KN+++WT +++ AQ +EA LF +M+ +V
Sbjct: 566 WSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASV 625
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALIDM+ K G + +A
Sbjct: 626 ELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADY 685
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ K ++W ++I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 686 VFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMG 745
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ GRR+F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP+E N IWGSL
Sbjct: 746 FVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSL 805
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 806 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 865
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 866 KTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 907
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 55/243 (22%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+++ + G + NALID Y+K+G A +VF+ M + V++W T +A +
Sbjct: 457 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM----- 511
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
V+ E+ + R+ F+ M + + +
Sbjct: 512 ---------------VREGELAGV---------------RKLFDEMPEKDTV-----SWN 536
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
++D +AG ++ A +L +RMP E N W ++++ GD+E+ K+
Sbjct: 537 TILDGYTKAGEVEAAFELFQRMP-ERNVVSWSTMVSGYCKKGDLEMARVIFD---KMPSK 592
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCS---YIEVSKRVH 325
N + I+ + A G +E+GK+ M++ V+ + C+ + + KR+H
Sbjct: 593 NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIH 652
Query: 326 EFV 328
+V
Sbjct: 653 RYV 655
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 228/343 (66%), Gaps = 6/343 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIA 77
YAK GDL++AR LF M +NV++W ++IAGYAQ Q AI LF+ M + + PDE+
Sbjct: 305 YAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 364
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SAC LGA+ELG W+ ++ + + + +NA+I MY++ G + A +VF+ M
Sbjct: 365 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 424
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ V+++ T+I+G A HG G EA+++ S M+ ++P+ +TFI +L+AC H GL+E GR+
Sbjct: 425 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 484
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
F +K +P I+ Y CM+DLLGR G L++A++ + RMP E +A ++GSLL AS I+
Sbjct: 485 VFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIH 539
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
VELGE A L +LEP NSGN+ +LSNIYA GRW + +IR+ M+ GVKK G S+
Sbjct: 540 KQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSW 599
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
+E ++H+F+ D SH D +YQ+L ++ +M+ A ++ ++
Sbjct: 600 VEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 642
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 2/228 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W MV GYAKV DL AR F+ M E++V+SW +++GYAQ EA+ LF M +
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGI 256
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE + +SAC+ G L + + Q + + AL+DMYAK G + A +
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARK 316
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHVG 190
+F M ++V+TW +MIAG A +G A+++F M A ++ P+E+T ++++SAC H+G
Sbjct: 317 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 376
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ELG + + I+ I + MI + R G +++A+++ + M
Sbjct: 377 ALELGNWVVRFL-TENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 71/287 (24%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
LF NV +T+++ Y+ + + + ++ +MQ V+PD + L A G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAF-VYPILIKSAGTGG 114
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN--------------- 135
+ H ++ + G + + NA+IDMYA+ G IG A +VF+
Sbjct: 115 IGF----HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 136 ------------------MKNKSVITWTTMI----------------------------- 148
M ++VITWT M+
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 149 --AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
+G A +GL EAL +F M A ++P+E T++ ++SAC G L + +
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR 290
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
I+ ++D+ + G L A KL MP N W S++A
Sbjct: 291 -IQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIAG 335
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ Y++ G + +A+ +F+ M ++V+S+ TLI+G+A EAI L M+ ++
Sbjct: 401 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 460
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+AC+ G +E G + I+ ++ ++D+ + G++ A +
Sbjct: 461 PDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDAKRT 516
Query: 133 FENM 136
E M
Sbjct: 517 MERM 520
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 214/323 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K DLN+A +F+ M KNV++W +I+G A + EA+ FR MQ + VK
Sbjct: 252 NALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVK 311
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ ++ L++CA LG +E+G+W+H Y+ + + + NAL+DMYAK G I +A +V
Sbjct: 312 PDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRV 371
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+MK + V ++T MI GLALHG A +FS M R ++PNE+TF+ +L AC H GLV
Sbjct: 372 FESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLV 431
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++YF M +Y + P+ E YGCMIDLLGRAG ++EAE+++ +M + G+LL
Sbjct: 432 AEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLG 491
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+V++GE +Q L +L+P G Y +++N+Y+ + RW ++ KIRK M++ ++K
Sbjct: 492 ACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKT 551
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP 335
PGCS IEV VHEF GD SHP
Sbjct: 552 PGCSLIEVDGVVHEFRKGDKSHP 574
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 137/241 (56%), Gaps = 6/241 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y+ G +++ + +F+ ++++SWTTLI + + + A+ F M ++
Sbjct: 150 NTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLR 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGKALQ 131
D ++ LSAC+ LG + LG+ +H+YI Y + V + NAL+DMY K + A +
Sbjct: 210 ADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYK 269
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K+V+TW MI+GLA G REALD F M+ VKP+E+T + +L++C ++G+
Sbjct: 270 VFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGV 329
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIW 247
+E+G+ M+ + + K ++D+ + G + EA E + RR + A I+
Sbjct: 330 LEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIF 388
Query: 248 G 248
G
Sbjct: 389 G 389
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSG 124
M V ++PD + L A A + + G+ IH + G+ V ++N L+ +Y+ G
Sbjct: 101 MLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCG 160
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I +VF+ ++ +++WTT+I GL A++ F M R++ + T + +LS
Sbjct: 161 SIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLS 220
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++G + LG++ + ++ ++ + ++D+ + L A K+ MP + N
Sbjct: 221 ACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVK-NV 279
Query: 245 AIWGSLLAA 253
W ++++
Sbjct: 280 VTWNAMISG 288
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 221/340 (65%), Gaps = 2/340 (0%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L Y + ++ Y K GDL +AR +F+ M +K+ ++W +I GYAQ EAI LF+ M
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM 320
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
++ + PD+I ++ LSACA +GA++LG+ + Y + G V + AL+DMYAK G +
Sbjct: 321 RMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSL 380
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILS 184
A +VF M NK+ ++W MI+ LA HG +EAL +F M E V PN+ITF+ +LS
Sbjct: 381 DNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ GRR F++M S +G+ PKIE Y CM+DL RAG+L+EA + MP + +
Sbjct: 441 ACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDE 500
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
I G+LL A ++++ E ++ L++LEP NSGNY I S +YA L RW++S ++R +M
Sbjct: 501 VILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLM 560
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ GV K PGCS+I+++ ++HEF AGD H ++ ++QIL
Sbjct: 561 KQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQIL 600
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 147/249 (59%), Gaps = 2/249 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ G + +AR +F+ +++K+++SW ++I+GY++M EA+ LFR M +
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+++++ L AC +LG ++LG W+ ++ + + + +ALI MY K G + A ++
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++MK K +TW MI G A +G+ EA+ +F M + P++IT I ILSAC +G +
Sbjct: 286 FDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG++ I S G + + ++D+ + G L A ++ MP N W ++++
Sbjct: 346 DLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP-NKNEVSWNAMIS 403
Query: 253 ASNIYGDVE 261
A +G +
Sbjct: 404 ALAFHGQAQ 412
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENV 71
N+ + A + D A F + + S+ +I G + ++ + A+ + RM+ +
Sbjct: 64 NSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL 123
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ + AC+ L AVE G H + + GL+ ++++LI MYA+ GK+G A +
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + K +++W +MI+G + EA+ +F M A +PNE++ +++L AC +G
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD 243
Query: 192 VELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
++LG + +E K+ +I + G+ G L A ++ M + + W
Sbjct: 244 LKLG-----TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
Query: 248 GSLLAA 253
+++
Sbjct: 298 NAMITG 303
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 228/343 (66%), Gaps = 3/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y G +A +F+ + E+N++SW +++ G+A +PNE +T+FR +
Sbjct: 159 NSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEAD 218
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD +++ L+ACA++GA+ LG +H + + GL + NALID+YAK G + A
Sbjct: 219 LMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAW 278
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M ++V++WT++I GLA +G G++AL++F MER R+ P +IT + +L AC H
Sbjct: 279 KVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHC 338
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G RYFN M+ +YGI P IE GCM+DLLGRAG ++EA + MP E NA +W +
Sbjct: 339 GLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRT 398
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +ELGE A L++L+P +SG+Y +LSN+YA +GRW ++ +RK M GV
Sbjct: 399 LLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGV 458
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K PG S +E+ V+EFV GD SHP+ D++YQ L +I +++
Sbjct: 459 RKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLR 501
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 34 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 93
L+ + + S T++ A P A+ L RR PD L AC +L A+
Sbjct: 82 LLPDPDPFSLNTVLRIAASSAHPRIALALHRRRLA---PPDTHTYPPLLQACTRLLALRE 138
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK--NKSVITWTTMIAGL 151
GE +H + GL +V + N+L+ Y G A +VF+ + +++++W +++ G
Sbjct: 139 GESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGF 198
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
A +G E L +F A + P+ T +++L+AC +G + LGRR ++ S+ G+
Sbjct: 199 AANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRR-VHVFASKVGLVGN 257
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+IDL + G +++A K+ M W SL+ A N +G
Sbjct: 258 SHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFG 306
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 214/311 (68%), Gaps = 10/311 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++G+ + G + AR LF+ M E++V SW+++I+GY+Q +QP+ A+ LF M V
Sbjct: 385 WNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGV 444
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIG 127
+P+EI M++ SA A LG + G W H YI L+ +PLN+ ALIDMYAK G I
Sbjct: 445 QPNEITMVSVFSAIATLGTLMEGRWAHEYI----LSNSIPLNDNLNAALIDMYAKCGSIT 500
Query: 128 KALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
ALQ+F ++++ SV W +I GLA+HG +L +FS+++R R+KPN ITFI +LSA
Sbjct: 501 IALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSA 560
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
CCH GLV+ G +YF MK+ Y IEP I+ YGCMIDLLGRAG L+EA +++R+MP +A+
Sbjct: 561 CCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVV 620
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IWG+LLAA +G+VE+GE A ++L KL+ + +LSNIYA GRW+++ +R+ M+
Sbjct: 621 IWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQ 680
Query: 306 DMGVKKMPGCS 316
+KK PGCS
Sbjct: 681 SQRMKKSPGCS 691
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 35/308 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY+K G ++ AR LFE + K+V+SW T+I GY Q+++ EA+ ++R M V
Sbjct: 253 WNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGV 312
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-------TIVPLN----------- 113
P+E+ ++ +SAC + AV G+ H I + G + TI+
Sbjct: 313 GPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFL 372
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
NALI + ++G I +A Q+F+ M + V +W++MI+G + + A
Sbjct: 373 QFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLA 432
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L +F M V+PNEIT +++ SA +G + GR + S I +ID
Sbjct: 433 LQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSN-SIPLNDNLNAALID 491
Query: 221 LLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYG--DVELGECALQHLIKLEPHN 277
+ + G + A +L + ++ + W +++ ++G +V L + ++++P++
Sbjct: 492 MYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNS 551
Query: 278 SGNYAILS 285
+LS
Sbjct: 552 ITFIGVLS 559
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 65/317 (20%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+AGY K G L+NAR LFE M K +S+TT++ G AQ + EAI +F+ M+ V
Sbjct: 122 NIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVI 181
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ + + +SA + +G + +H + GL + + L+ MY +G A +
Sbjct: 182 PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVL 241
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSR-------------------------- 166
F+ + ++V+TW M+ G + GL A D+F R
Sbjct: 242 FDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEAL 301
Query: 167 -----MERARVKPNEITFIAILSACCHVGLVELGRRYFNI-------------------- 201
M R V PNE+ + ++SAC V G+++ I
Sbjct: 302 RMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFY 361
Query: 202 ----------MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G + + + +I R G +++A +L MP E + W S++
Sbjct: 362 AACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP-ERDVFSWSSMI 420
Query: 252 AASNIYGDVELGECALQ 268
+ Y E + ALQ
Sbjct: 421 SG---YSQNEQPDLALQ 434
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 36/266 (13%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM--------------- 119
E+ +++AL +C+ L A+ G+ IH+ + + GL + + + N+LI
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 120 ----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
Y KSG + A +FE M K +++TTM+ GLA + EA+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M A V PNE+T +++SA HVG + L R + + + G+E ++ +
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGI-LNCRMLHALSFKLGLEALNIVATNLVHMYC 230
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 283
L A L +P E N W +L + G V+L + ++ + ++
Sbjct: 231 VCSSLGNARVLFDEIP-ERNVVTWNVMLNGYSKSGLVDLARDLFE---RIPAKDVVSWGT 286
Query: 284 LSNIYAILGRWNESGKIRKVMRDMGV 309
+ + Y + R E+ ++ + M GV
Sbjct: 287 IIDGYVQIERLGEALRMYRSMLRTGV 312
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 212/334 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR +F+ M +K+ ++W ++ GYA P EA+ LF MQ E V+PD A+
Sbjct: 217 YVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAV 276
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG ++ L ALIDMYAK G +A VF+ M+
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRK 336
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +I W MI GL + G + A + +ME++ VK N+ TFI +L +C H GL++ GRRY
Sbjct: 337 KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 396
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGC++DLL RAG LQEA +L+ MP ANA I G+LL I+
Sbjct: 397 FHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR 456
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ EL E L LI+LEP NSGNY +LSNIY+ GRW ++ K+R M++ GV+K+P CS++
Sbjct: 457 NAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 516
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 517 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 550
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA+ G L+ A+ +F+ M + +SWT LI Y EA+ + R ++
Sbjct: 110 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA++ + GE + EQ G+ V + A +D+Y K G++ KA +V
Sbjct: 170 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 229
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K + W M+ G A +G REALD+F M+ V+P+ LSAC +G +
Sbjct: 230 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 289
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ ++ ++ + +ID+ + G EA + ++M + + +W +++
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQM-RKKDIIVWNAMIL 347
Query: 253 ASNIYG 258
+ G
Sbjct: 348 GLGMTG 353
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 73 PDEIAMLAALSACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + AL + ++L + GE +H + +T + +L+ +YA+ G + +A +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + S ++WT +I G REA+ + ++P+ T + +L+AC V
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G + + GI + +DL + G + +A ++ +M + +A WG+++
Sbjct: 188 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RDKDAVAWGAMV 245
Query: 252 A--ASN 255
ASN
Sbjct: 246 GGYASN 251
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 212/334 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR +F+ M +K+ ++W ++ GYA P EA+ LF MQ E V+PD A+
Sbjct: 264 YVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAV 323
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG ++ L ALIDMYAK G +A VF+ M+
Sbjct: 324 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRK 383
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +I W MI GL + G + A + +ME++ VK N+ TFI +L +C H GL++ GRRY
Sbjct: 384 KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 443
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGC++DLL RAG LQEA +L+ MP ANA I G+LL I+
Sbjct: 444 FHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR 503
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ EL E L LI+LEP NSGNY +LSNIY+ GRW ++ K+R M++ GV+K+P CS++
Sbjct: 504 NAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 563
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 564 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 597
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA+ G L+ A+ +F+ M + +SWT LI Y EA+ + R ++
Sbjct: 157 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 216
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA++ + GE + EQ G+ V + A +D+Y K G++ KA +V
Sbjct: 217 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 276
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K + W M+ G A +G REALD+F M+ V+P+ LSAC +G +
Sbjct: 277 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 336
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ ++ ++ + +ID+ + G EA + ++M + + +W +++
Sbjct: 337 DLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQM-RKKDIIVWNAMIL 394
Query: 253 ASNIYG 258
+ G
Sbjct: 395 GLGMTG 400
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 73 PDEIAMLAALSACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + AL + ++L + GE +H + +T + +L+ +YA+ G + +A +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + S ++WT +I G REA+ + ++P+ T + +L+AC V
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G + + GI + +DL + G + +A ++ +M + +A WG+++
Sbjct: 235 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RDKDAVAWGAMV 292
Query: 252 A--ASN 255
ASN
Sbjct: 293 GGYASN 298
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 220/341 (64%), Gaps = 5/341 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ G+ + R LF+ M +++ ISW+ +IAGY+Q EA+ F MQ +
Sbjct: 122 WNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCE 176
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + ALS C+ + A+ELG +H + + G T + NAL+ MY K G I +A
Sbjct: 177 RLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARD 236
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ + K V++W TMI G A HG G EAL +F M+ ++P++ T +++L+AC H GL
Sbjct: 237 AFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGL 296
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M YGI K+ Y CM+DLLGRAG L+EA+ L++ MPFE +AA WG+LL
Sbjct: 297 VDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALL 356
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+G+ ELGE A Q + ++EPHNSG Y +LS +YA GRW+++GK+R MR+ GVKK
Sbjct: 357 GASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKK 416
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG S++EV ++H F GDTSHP D++Y L +++ ++K
Sbjct: 417 VPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLK 457
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 19/277 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY + DL ARALFE M E++++SW +++GYAQ +EA +F +M ++N
Sbjct: 29 WNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKN- 87
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
I+ L+A Q G +E + + + T+V N + G + K
Sbjct: 88 ---GISWNGLLAAYVQNGRIEDAKRLFESKMDW---TLVSWNCLM------GGFVRKRRN 135
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+NM + I+W+ MIAG + +G EAL F M+R + N +F LS C ++
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ELGR+ + ++K+ Y + ++ + + G + EA + + E + W ++
Sbjct: 196 LELGRQLHCRLVKAGYQTGWYVGN--ALLAMYCKCGSIDEARDAFQEI-LEKDVVSWNTM 252
Query: 251 LA--ASNIYGDVELGECALQHLIKLEPHNSGNYAILS 285
+ A + +G+ L L + P ++ ++L+
Sbjct: 253 IHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLA 289
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 220/342 (64%), Gaps = 9/342 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
W M++GY ++G + NA LFE M E++V SW LIAGY Q EA++LFRRM
Sbjct: 225 WTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEA 284
Query: 69 ----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+ +P+++ + +LSAC G + LG+WIH Y+ + GL ++NAL+DMY K G
Sbjct: 285 GAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCG 344
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER--ARVKPNEITFIAI 182
+ +A +VF+ +S+ +W +MI LALHG + A+ +F M + VKP+E+TFI +
Sbjct: 345 CLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGL 404
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L+AC H GLVE G YF +M YGIEP+IE YGC++DLLGRAG +EA +++R M E
Sbjct: 405 LNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEP 464
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
+ IWGSLL I+G +L E +++ LI ++P+N G +L+NIY LG+W+E K+RK
Sbjct: 465 DEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRK 524
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
V+++ K PGCS+IE+ +VH+F + D +HP + +Y L
Sbjct: 525 VLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTL 566
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLA 80
+ +L+ AR +F+ + NV +T +I YA A+ L+R M + P+
Sbjct: 101 LSNLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPH 160
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM--------------------- 119
L +C Q+ +H + + G + AL+D
Sbjct: 161 VLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTER 220
Query: 120 -----------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
Y + G+IG A+ +FE M + V +W +IAG +GL EAL +F RM
Sbjct: 221 NVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMI 280
Query: 169 RARV-------KPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMID 220
+PN++T + LSAC H G++ LG+ + ++ G++ + ++D
Sbjct: 281 AVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSN--ALVD 338
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G+ G L+EA ++ R E + W S++ ++G +
Sbjct: 339 MYGKCGCLKEARRVFDRT-LERSLTSWNSMINCLALHGQSQ 378
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 220/323 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYAKVG++ AR +F+ M +KNVISW+ +I GYAQ EA+ LFR+M + +
Sbjct: 242 WNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGI 301
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD ++++ A+SAC+QLGA++ G WIH Y+++ + + + AL+DMY K G +A +
Sbjct: 302 KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARR 361
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +M ++V++W MI GL ++G G+EAL+ F++ME R+ +++ F+ +L AC H L
Sbjct: 362 IFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G FN MK Y +EPK+E YGC++DLLGRAG L + + +++ MP + NAA+WGSLL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V L E ++ L +L+ +SG Y ++SNIYA +G W +IRK+M++ +KK
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 312 MPGCSYIEVSKRVHEFVAGDTSH 334
G S IEV V EFV+G+ SH
Sbjct: 542 DIGRSVIEVDGNVEEFVSGEKSH 564
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 45/264 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA-QMDQPNEAITLFRRMQVEN 70
WN+M+ GY G++ NA+ +F+ M E++V+SW+ +I GY +M + N A F M
Sbjct: 179 WNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTR- 237
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+L W N++ID YAK G++ A
Sbjct: 238 ---------------------DLVSW-----------------NSMIDGYAKVGEMEVAR 259
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K+VI+W+ MI G A H +EAL++F +M +KP+ ++ + +SAC +G
Sbjct: 260 EIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLG 319
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ G R+ ++ R + I ++D+ + G EA ++ MP E N W +
Sbjct: 320 ALDQG-RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMP-ERNVVSWNVM 377
Query: 251 LAASNIYGDVELGECALQHLIKLE 274
+ + G G+ AL+ ++E
Sbjct: 378 IVGLGMNG---FGKEALECFTQME 398
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 18/251 (7%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SRLL +++V+ K ++N A +F + + N T++ Y + P A+
Sbjct: 44 FAASRLL----DSVVS---KTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALR 96
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ M+ + + D L AC + + G + + G V + N LI MY
Sbjct: 97 FYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYC 156
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFI 180
+ G+ G A VF+ K +++W +M+ G G A +MF M ER V + I
Sbjct: 157 RCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWS----I 212
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
I +G V R +F+ M +R + + MID + G ++ A ++ +M
Sbjct: 213 MIDGYGKKMGEVNRARVFFDSMPTR-----DLVSWNSMIDGYAKVGEMEVAREIFDKM-L 266
Query: 241 EANAAIWGSLL 251
+ N W ++
Sbjct: 267 QKNVISWSIMI 277
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/349 (43%), Positives = 222/349 (63%), Gaps = 4/349 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
W MV GYAK+G+++ AR LF+ M E++VIS ++AGY Q EA+ F M +
Sbjct: 287 WANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKE 346
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD +L LSA AQLG + G +H YIE G + L ALIDMYAK G I AL
Sbjct: 347 LFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNAL 406
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE++ +KS+ W +I GLA+HGLG A ++F ME+ VKP++ITFI +L+AC H G
Sbjct: 407 SVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAG 466
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G F +M+ + +EPK++ YGCM+D+LGRAG+++EA+K + +MP E N +W +L
Sbjct: 467 LVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTL 526
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A + + +GE +HLI ++ +N +Y +LSNIYA G WN+ +IR +M+ +K
Sbjct: 527 LSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLK 586
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI---LCKINGQMKFAEH 356
K+PGCS IE+ VHEF D SHP +Y + L +N ++ + +H
Sbjct: 587 KIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSALNSEVAYCKH 635
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQP-NEAITLFRRMQV 68
+N+M+ GY K G + +AR LF++M +KN+ISW ++I+GYA+ ++ A LF M
Sbjct: 191 FNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMP- 249
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
K D I+ + + C + G +E H+ Q +V N ++D YAK G+I
Sbjct: 250 ---KRDLISWNSMIDGCVKCGKMENA---HHLFNQMPKRDVVSWAN-MVDGYAKLGEIDI 302
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACC 187
A +F+ M + VI+ M+AG +G EAL+ F M R + P+ T + LSA
Sbjct: 303 ARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIA 362
Query: 188 HVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+G + G + I + + + K+ +ID+ + G + A + + + +
Sbjct: 363 QLGHFDEGVALHCYIEDNGFSLSEKLGV--ALIDMYAKCGSIDNALSVFEDID-DKSIDH 419
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLE 274
W +++ I+G LGE A + +++E
Sbjct: 420 WNAIIGGLAIHG---LGEVAFELFMEME 444
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 52/311 (16%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+ N W +I ++ + P EA +F M V D+ + L AC++LG ++ G
Sbjct: 84 QDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQ 143
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + + + + V L N L+ +Y + G +G A Q+F+ M + +++ +MI G HG+
Sbjct: 144 IHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGM 203
Query: 157 GREALDMFSRM---------------------ERARV---------KPNEITFIAILSAC 186
+ A ++F M E RV K + I++ +++ C
Sbjct: 204 VKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGC 263
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP----FEA 242
G +E FN M R + + M+D + G + A L MP
Sbjct: 264 VKCGKMENAHHLFNQMPKR-----DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISC 318
Query: 243 NAAIW-----GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 297
NA + G L+ A N + D+ + +L P N+ LS I A LG ++E
Sbjct: 319 NAMMAGYVQNGHLMEALNFFHDMLSRK-------ELFPDNATLLITLSAI-AQLGHFDEG 370
Query: 298 GKIRKVMRDMG 308
+ + D G
Sbjct: 371 VALHCYIEDNG 381
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 217/343 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G L+ ARA+F +M +K+ +SW ++A Y+Q+ E + LF+ M
Sbjct: 389 WNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGE 448
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A LS CA + A+E G +H+ + + G + NAL+ MY K G + +A
Sbjct: 449 WVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHS 508
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M+ + V++W TMIAG A HG G+EAL++F M + KP++IT + +L+AC H GL
Sbjct: 509 AFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGL 568
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL
Sbjct: 569 VEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W + K+R +M + GVKK
Sbjct: 629 GASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKK 688
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S+IEV +VH F GD+ HP+ + +Y L ++ +MK A
Sbjct: 689 VPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKA 731
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV+GYA+ GD+ AR LF++ ++V +WT +++GYAQ EA +F M +N
Sbjct: 296 WNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNA 355
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A ++A Q +E + + + + + + N ++ YA++G + +A
Sbjct: 356 ----VSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASW----NTMLTGYAQAGMLDEARA 407
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K ++W M+A + G E L +F M R N F +LS C +
Sbjct: 408 IFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAA 467
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAA 245
+E G + + ++K+ YG+ GC + + + G ++EA M E +
Sbjct: 468 LECGMQLHSRLIKAGYGV-------GCFVGNALLAMYFKCGSMEEAHSAFEEME-ERDVV 519
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK--- 302
W +++A +G G+ AL+ + ++ I + +L + SG + K
Sbjct: 520 SWNTMIAGYARHG---FGKEALEVFDTMRKTSTKPDDI--TLVGVLAACSHSGLVEKGIS 574
Query: 303 ----VMRDMGVKKMP 313
+ RD GV P
Sbjct: 575 YFYSMHRDFGVATKP 589
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 52/257 (20%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + G + AR LF+ TE + ISW L+AGY Q Q EA +F +M +V
Sbjct: 234 WNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDV 293
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N ++ YA+ G + +A +
Sbjct: 294 V----------------------SW-----------------NTMVSGYARRGDMAEARR 314
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + V TWT +++G A +G+ EA +F M N +++ A+++A +
Sbjct: 315 LFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRM 370
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E + F+ M R + + M+ +AG L EA + MP + +A W ++L
Sbjct: 371 MEEAKELFDAMPCR-----NVASWNTMLTGYAQAGMLDEARAIFGMMP-QKDAVSWAAML 424
Query: 252 AASNIYGDVELGECALQ 268
AA Y + E LQ
Sbjct: 425 AA---YSQIGFSEETLQ 438
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 132/302 (43%), Gaps = 21/302 (6%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
+ R +NTM+AGYA G L A + F + + S+ TL+ + L
Sbjct: 132 AMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRAL 191
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
F M V+ D ++ +S+ A G V L +Y + V N ++ Y +
Sbjct: 192 FDEMPVK----DSVSYNVMISSHANHGLVSLAR---HYFDLAPEKDAVSW-NGMLAAYVR 243
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
+G+I +A ++F++ I+W ++AG EA MF++M + V +++ +
Sbjct: 244 NGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDV----VSWNTM 299
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
+S G + RR F++ R + + ++ + G L+EA+++ MP +
Sbjct: 300 VSGYARRGDMAEARRLFDVAPIR-----DVFTWTAIVSGYAQNGMLEEAKRVFDAMP-DK 353
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
NA W +++AA Y + E A + + N ++ + YA G +E+ I
Sbjct: 354 NAVSWNAMMAA---YVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFG 410
Query: 303 VM 304
+M
Sbjct: 411 MM 412
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER---- 169
N I + ++G++ A ++F M +S T+ TM+AG A +G +AL F + R
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170
Query: 170 ---------------ARVKP--------NEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
A V+ + +++ ++S+ + GLV L R YF++ +
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKD 230
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + M+ R G +QEA +L E +A W +L+A
Sbjct: 231 AV-----SWNGMLAAYVRNGRIQEARELFDSRT-EWDAISWNALMA 270
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 221/342 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ GY K G + AR LF+ M E+N +SW+ +I GY M EA+ LF +Q+ +
Sbjct: 177 WTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGL 236
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ ++ AL+AC+ LG+++ G WIH Y+++ G L AL+DMYAK G I A
Sbjct: 237 RPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACS 296
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M +K +T++I+GLA HG +A+ +F RM+ +V PNE+TFI +LSAC +GL
Sbjct: 297 VFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGL 356
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R FN M YGIEP ++ YGCM+DLLGRAG L+EA++L+R MP E ++ + G+LL
Sbjct: 357 VDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALL 416
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ ++GDVELG+ ++ L++ + G + +LSN+YA +W+ K+RK M VKK
Sbjct: 417 NSCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKK 476
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
+PGCS IE+ V EF+AGD S+ + + +L I+ +KF
Sbjct: 477 VPGCSSIEIDGSVSEFIAGDMSYLRVEDVMLVLLGIDNHLKF 518
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 212/332 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K G++ A+ +F+ M E+NV +WT +I G AQ ++A + F +M E +
Sbjct: 663 NALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIV 722
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSACA GA+E + +HN+ GL + + + NAL+ MYAK G I A V
Sbjct: 723 PDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSV 782
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M + V +WT MI GLA HG G EALD F +M+ KPN +++A+L+AC H GLV
Sbjct: 783 FDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLV 842
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR F M YGIEP +E Y CM+DLLGRAG L+EAE + MP E + A WG+LL
Sbjct: 843 DEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLG 902
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A YG++E+ E A + +KL+P ++ Y +LSNIYA G+W + +R +M+ G++K
Sbjct: 903 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKE 962
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S+IEV R+H FV GDTSHP+ +Y L
Sbjct: 963 PGRSWIEVDNRIHSFVVGDTSHPESKEIYAQL 994
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 103/173 (59%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y K G + +A+ +F+ M E+NVISWT +I G A + EA LF +MQ E
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L+A A GA+E + +H++ GL + + NAL+ MYAKSG I A V
Sbjct: 318 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 377
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ M + + +WT MI GLA HG G+EA +F +M+R PN T+++IL+A
Sbjct: 378 FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNA 430
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 109/181 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L AR +F+ + +KN+ WTT+I GYA+ +A+ ++ +M+ E +
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ 216
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI L+ L AC ++ G+ IH +I Q G + V + AL++MY K G I A +
Sbjct: 217 PNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLI 276
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++VI+WT MI GLA +G G+EA +F +M+R PN T+++IL+A G +
Sbjct: 277 FDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 193 E 193
E
Sbjct: 337 E 337
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 2/230 (0%)
Query: 9 YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++ + + Y + G +++AR LF+ ++ ++V +W +I G AQ EA++LF +MQ
Sbjct: 559 FRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQR 618
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
E PD + LSA A+E + +H++ GL + + NAL+ Y+K G +
Sbjct: 619 EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDL-RVGNALVHTYSKCGNVKY 677
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A QVF++M ++V TWT MI GLA HG G +A F +M R + P+ T+++ILSAC
Sbjct: 678 AKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAS 737
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
G +E + N S G+ + ++ + + G + +A + M
Sbjct: 738 TGALEWVKEVHNHAVSA-GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM 786
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G +++AR +F+ MTE+++ SWT +I G AQ + EA +LF +MQ
Sbjct: 359 NALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL 418
Query: 73 PDEIAMLAAL--SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ L+ L SA A A+E + +H + E+ G + + + NALI MYAK G I A
Sbjct: 419 PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDAR 478
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
VF+ M ++ VI+W M+ GLA +G G EA +F +M++ + P+ T++++L+
Sbjct: 479 LVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNT 533
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G +++AR +F+ M +++VISW ++ G AQ +EA T+F +MQ E +
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLV 521
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L+ L+ A+E +H + + GL + + +A I MY + G I A +
Sbjct: 522 PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLL 581
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ + + V TW MI G A GREAL +F +M+R P+ TFI ILSA
Sbjct: 582 FDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
+A+ + + + + D + + L C + + L + +H I + G+ + + N L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
+Y + G++ A QVF+ + K++ WTTMI G A +G +A+ ++ +M + +PNEI
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 178 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T+++IL ACC ++ G++ + +I++S + + ++E ++++ + G +++A+ +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET--ALVNMYVKCGSIEDAQLIFD 278
Query: 237 RMPFEANAAIWGSLLAASNIYG 258
+M E N W ++ YG
Sbjct: 279 KM-VERNVISWTVMIGGLAHYG 299
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 224/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T+V+GY K GD+ AR +F+ M KN+++WT +++ AQ EA LF +M+ +V
Sbjct: 250 WSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASV 309
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D A+++ L+ACA+ G++ LG+ IH Y+ L + NALIDM+ K G I +A
Sbjct: 310 ELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADY 369
Query: 132 VFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ + K ++W T+I G A+HG G +ALD F++M+ P+ +T I +LSAC H+G
Sbjct: 370 VFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMG 429
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE GRRYF M+ YG+ P+IE YGCMIDLLGR G ++EA L++ MP++ N IWGSL
Sbjct: 430 FVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSL 489
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L KL+P N+GNYA+LS+IYA G+W++ K R M+ G +
Sbjct: 490 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQ 549
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S+IE+ + HEF GD HPD D++ +++ +++ K
Sbjct: 550 KSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHAK 591
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 142/351 (40%), Gaps = 67/351 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISW--TTLIAGYAQMDQPNEAITLFRRMQVEN 70
+ +++ YA L +R +F + ++ TL+ YA P EA+ +F M
Sbjct: 60 SKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHR- 118
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
D + A + G L +H+++ + G + NALID Y+K+G A
Sbjct: 119 ---DSFTYSFLIKALSSAGVAPL-RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDAS 174
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE M + V++W + +A + G
Sbjct: 175 KVFEEMPRRDVVSWNSAMAAMVRQ-----------------------------------G 199
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE RR F+ M +E + ++D +AG ++EA KL + MP E N W ++
Sbjct: 200 EVEGARRMFDEM-----LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMP-ERNVVSWSTV 253
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
++ GD+E+ K+ N + I+ + A G E+GK+ M++ V+
Sbjct: 254 VSGYCKKGDMEMARVIFD---KMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVE 310
Query: 311 K--------MPGCS---YIEVSKRVHEFVA----GDTSHPDFDRLYQILCK 346
+ C+ + + KR+H +V G ++H + L + CK
Sbjct: 311 LDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHV-CNALIDMFCK 360
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 230/343 (67%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T+V+ Y K GD+ AR +F+ M KN+++WT +++ AQ EA LF M +
Sbjct: 332 WSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAI 391
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D IA+++ L+ACA+ G++ LG+ IH ++ Q L+ + NAL+DM+ K G + +A
Sbjct: 392 ELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADY 451
Query: 132 VFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K +++W +I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 452 IFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMG 511
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GRR+F M++ YGI+P+IE YGCM+DLLGR G ++EA +++RMP+E N IWGSL
Sbjct: 512 LVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSL 571
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L L+P ++GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 572 LSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQ 631
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K G S+IE+++ HEF GD HP+ D++ ++ +++ +KF
Sbjct: 632 KTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKF 674
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 46/256 (17%)
Query: 49 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 108
YA P+ A+ +F + + + L A A L V H ++ + G
Sbjct: 178 AYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGA---HAHVVKLGSAE 234
Query: 109 IVPLNNALIDMYAKS-------------------------------GKIGKALQVFENMK 137
+ NALID Y+K+ G++ A +F+ M
Sbjct: 235 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 294
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K ++W TM+ G A G +A ++F RM V +++ ++SA C G +E+ R
Sbjct: 295 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNV----VSWSTVVSAYCKKGDMEMARV 350
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAAS 254
F+ M ++ + + M+ + G ++EA +L M E + S+LAA
Sbjct: 351 IFDKMPAK-----NLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAAC 405
Query: 255 NIYGDVELGECALQHL 270
G + LG+ +H+
Sbjct: 406 AESGSLALGKRIHRHV 421
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 230/343 (67%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T+V+ Y K GD+ AR +F+ M KN+++WT +++ AQ EA LF M +
Sbjct: 260 WSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAI 319
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D IA+++ L+ACA+ G++ LG+ IH ++ Q L+ + NAL+DM+ K G + +A
Sbjct: 320 ELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADY 379
Query: 132 VFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K +++W +I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 380 IFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMG 439
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GRR+F M++ YGI+P+IE YGCM+DLLGR G ++EA +++RMP+E N IWGSL
Sbjct: 440 LVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSL 499
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L L+P ++GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 500 LSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQ 559
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K G S+IE+++ HEF GD HP+ D++ ++ +++ +KF
Sbjct: 560 KTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKF 602
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 46/256 (17%)
Query: 49 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 108
YA P+ A+ +F + + + L A A L V H ++ + G
Sbjct: 106 AYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGA---HAHVVKLGSAE 162
Query: 109 IVPLNNALIDMYAKS-------------------------------GKIGKALQVFENMK 137
+ NALID Y+K+ G++ A +F+ M
Sbjct: 163 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 222
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K ++W TM+ G A G +A ++F RM N +++ ++SA C G +E+ R
Sbjct: 223 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMP----GRNVVSWSTVVSAYCKKGDMEMARV 278
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAAS 254
F+ M ++ + + M+ + G ++EA +L M E + S+LAA
Sbjct: 279 IFDKMPAK-----NLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAAC 333
Query: 255 NIYGDVELGECALQHL 270
G + LG+ +H+
Sbjct: 334 AESGSLALGKRIHRHV 349
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/322 (45%), Positives = 209/322 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y K G++ AR+LF+ M +N++SW +IA Y Q + A+ LFRRMQ E V
Sbjct: 268 NALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVD 327
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D I M++ +SACA LGA+ G W+H +++ GL V + NALIDMYAK G I A +V
Sbjct: 328 FDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREV 387
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + +SV++WT+MI A HG G +AL +FSRM+ VKPN TF A+ +AC H GLV
Sbjct: 388 FERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLV 447
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR++F M Y I P +E CM+DLLGRAG L EA + + +MP E + ++WG+LL
Sbjct: 448 EEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLG 507
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ I+ ++EL E + L L+P Y ++SNIYA GRW ++ ++RK+M + +KK+
Sbjct: 508 SCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKI 567
Query: 313 PGCSYIEVSKRVHEFVAGDTSH 334
PG S +EV++R H F++G S
Sbjct: 568 PGHSLVEVNRRFHTFLSGSRSQ 589
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 181/360 (50%), Gaps = 24/360 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++VA Y++ G+ +F M +N++SWT +IAGY Q E + +FR M +
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQ 226
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +++ L ACA L + LG+ IH Y + G++ V L NALI +Y K G + A +
Sbjct: 227 PNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSL 286
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +++++W MIA + G A+ +F RM+ +V + IT ++++SAC +G +
Sbjct: 287 FDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGAL 346
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR ++K R G+E + +ID+ + G + A ++ R+P + + W S++
Sbjct: 347 NTGRWMHELVK-RKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVS-WTSMIG 404
Query: 253 ASNIYGDVELGECALQHLIKLEPH----NSGNYAILSNIYAILGRWNESGK-IRKVMRDM 307
A +G GE AL+ +++ NS +A + G E K +MRD
Sbjct: 405 ACASHGH---GEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDY 461
Query: 308 GVKKMPGCSY----IEVSKR------VHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 355
+ MPG + +++ R +EF+ PD +L C+I+ ++ AE
Sbjct: 462 SI--MPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAE 519
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 2/229 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ AR +F+ M +++V W TLI GYA EA+ L+ M + PD + +
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRS 137
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA L A+ G+ +H I ++G ++ V + ++L+ MY++SG+ VF M +++++W
Sbjct: 138 CAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSW 197
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
T +IAG + +E L +F M + +PN +T +++L AC + + LG + +
Sbjct: 198 TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLG-KLIHGYGI 256
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ G++P + +I L G+ G ++ A L M + N W +++AA
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAA 304
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 231/356 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G+LN+A +FE M E++V+SWT++IAGYA+ + ++ LF M+ E++
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M L ACA L A+E G+ IH +I + G + + NAL+DMY K G +G A +
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 382
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +++WT MIAG +HG G EA+ F+ M + ++P+E++FI+IL AC H GL+
Sbjct: 383 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 442
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +FN+M++ IEPK E Y C++DLL RAG L +A K ++ MP E +A IWG+LL
Sbjct: 443 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLC 502
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
IY DV+L E +H+ +LEP N+G Y +L+NIYA +W E K+R+ + G++K
Sbjct: 503 GCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKN 562
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS+IE+ +VH FV GD+SHP +++ +L K +MK H ++++D
Sbjct: 563 PGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKAD 618
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 49/267 (18%)
Query: 11 FWNTMVAGYAKVGD------------------LNNARALFELMTEKNVISWTTLIAGYAQ 52
WN ++ GYAK+G+ + +AR LF+ + +++VISW ++I+GY
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228
Query: 53 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 112
+ + LF +M + + D M++ VEL L
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVS----------VEL-----------------TL 261
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
NN L+DMY+KSG + A+QVFE M +SV++WT+MIAG A GL ++ +F ME+ +
Sbjct: 262 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 173 KPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
PN IT IL AC + +E G+ + +I+++ + ++ + ++D+ + G L A
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLA 379
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYG 258
L +P E + W ++A ++G
Sbjct: 380 RLLFDMIP-EKDLVSWTVMIAGYGMHG 405
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 62 LFRRMQVENVKPDEIAML----AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
L R M++ N P L + L CA L +++ G IH+ I+ + L + L+
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--------ER 169
MY G + + ++F+ + N+ V W ++ G A G RE+L +F RM E
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 170 ARVKPNE------ITFIAILSACCHVGLVELGRRYFNIM---------KSRYGIEPKIEQ 214
AR +E I++ +++S GL E G F M + +E +
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNN 263
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
C++D+ ++G L A ++ M E + W S++A
Sbjct: 264 --CLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG 299
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 218/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR+LFE M E+NVISW+ +I G+ + + EA+ F+ M +
Sbjct: 248 WNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGI 307
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A + A+SACAQLGA+E G W+H+Y+E+ + + V + ALIDMY K G++ A+
Sbjct: 308 RPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAML 367
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M +SV+TW MI GL HG G +A+ +F RME RV ++++ +A+L+AC H GL
Sbjct: 368 IFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGL 427
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F+ MK +GI+PK+E YG ++DLLGRAG L +A + MP E +WGSLL
Sbjct: 428 VSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLL 487
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA + VEL E +++ L L +SG Y +LSNIYA G W + +IRK+M D G++K
Sbjct: 488 AACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRK 547
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV +HEFV G SH D +Y +L
Sbjct: 548 DIGRSVIEVDGEIHEFVNGGGSHLCTDEIYLML 580
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 30/264 (11%)
Query: 16 VAGYAKVGDLNNARALFELMTE---KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
V G A + D A+F + E ++ W T I +A +P A+ F RM+ V+
Sbjct: 57 VPGAAPLAD-----AVFARLPEPAARDPFPWNTAIRLHAP-GRPRAALLYFARMRSCGVR 110
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD A L AC G +H + GL + NALI Y + +V
Sbjct: 111 PDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKV 170
Query: 133 FENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F+ ++ +++W +M+AG G A ++F M + + ++ A++ G
Sbjct: 171 FDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMP----QRDAFSWGALIDGYGKQG 226
Query: 191 --LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
V+ R F+ M R + + MID R G + EA L MP E N W
Sbjct: 227 GAGVDRARELFDQMTER-----DLVCWNSMIDGYARHGRMDEARSLFEEMP-ERNVISWS 280
Query: 249 SLLAASNIYGDVELGEC--ALQHL 270
+ I G V GE AL+H
Sbjct: 281 IV-----IDGHVRCGEAKEALEHF 299
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 227/342 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ + +L + LF+ M +++V+SW ++I G+A++ Q EA+T F M+ V
Sbjct: 261 WNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + +L+ LSACA GA++ G WIH Y+++ +N L+++LIDMY+K G I KA+Q
Sbjct: 321 SPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQ 380
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + + TWT+++ GLA+HG G +AL FS+M+ A+V+P+++T + +LSAC H GL
Sbjct: 381 IFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF M+ +G+ PK+E YGCM+DLLGR G L+EA L+ MP EAN IWG+ L
Sbjct: 441 LDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFL 500
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ +VELGE A + L+ L+P + +LSN+YA +W+ S +RK ++ G+KK
Sbjct: 501 SACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKK 560
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PGCS IEV+ VH F+ GD SHP + + ++ KI M+
Sbjct: 561 SPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMRL 602
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 44/291 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y G + R +F+ M + ++ WT +I Y + P +A+ LFR M+ + PD +A+
Sbjct: 136 YVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAI 195
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+SAC LG + + + +H +IE+ G+ +++ LI Y + G + A + F+
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 139 KSVITWTT-------------------------------MIAGLALHGLGREALDMFSRM 167
K+++ W T MI G A G +EAL F M
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM 315
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
E + V PN +T ++ LSAC G ++ G + + + + +ID+ + G
Sbjct: 316 EFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGD 374
Query: 228 LQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ +A E+ RR F W S++ ++G GE AL + K++
Sbjct: 375 IDKAVQIFEESTRRDLF-----TWTSIVCGLAMHGR---GEKALHYFSKMK 417
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEW 96
NV W T+I + L MQ ++P+ + L A V+ GE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + + G ++ AL+ Y G +GK QVF+ M+ ++ WT +I
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQY 215
+AL++F M + P+ + ++SAC +G +LG + + + GIE
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLG--DLGVAKAMHCFIEKSGIEVDAFVS 230
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+I G G L A + + P + N +W +++ S + ++ELG+ Q +
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSM 284
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 232/356 (65%), Gaps = 1/356 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y + D++ AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ +N+KP
Sbjct: 171 TLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKP 230
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+EI +L+ LS+CA LG+++LG+WIH Y +++G V +N ALIDM+AK G + A+ +F
Sbjct: 231 NEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIF 290
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
ENM+ K W+ MI A HG ++ MF RM V+P+EITF+ +L+AC H GLVE
Sbjct: 291 ENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVE 350
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR YF+ M +GI P I+ YG M+DLLGRAG+L++A + + ++P +W LLAA
Sbjct: 351 EGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAA 410
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ + ++EL E + +++L+ + G+Y ILSN+YA +W +RKVM+D K+P
Sbjct: 411 CSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVP 470
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
GCS IEV+ VHEF +GD +L++ L ++ ++K A ++ + S V+ +D+
Sbjct: 471 GCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDT-SMVVHADM 525
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 2/234 (0%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ M+E +++ + ++ GY++ P E LF + +++ PD + L ACA
Sbjct: 84 ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
A+E G +H + G++ V + LI+MY + + A VF+ + V+ + M
Sbjct: 144 AKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAM 203
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I G A EAL +F M+ +KPNEIT +++LS+C +G ++LG ++ + ++G
Sbjct: 204 ITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLG-KWIHEYAKKHG 262
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ +ID+ + G L +A + M ++ A W +++ A +G E
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQA-WSAMIVAYANHGQAE 315
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 33/146 (22%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ M+ YA G N+ +FE RM+ ENV
Sbjct: 301 WSAMIVAYANHGQAENSMLMFE-------------------------------RMRSENV 329
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDEI L L+AC+ G VE G E+ + ++G+ + +++D+ ++G + A
Sbjct: 330 QPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAY 389
Query: 131 QVFENMK-NKSVITWTTMIAGLALHG 155
+ + + + + + W ++A + H
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHN 415
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 227/356 (63%), Gaps = 1/356 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + +A ++F M K+++SW T+I GY++ PNEA+ LF MQ N K
Sbjct: 391 NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY-NSK 449
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I M L ACA L A+E G+ IH +I + G + + NAL+DMY K G +G A +
Sbjct: 450 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 509
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +++WT MIAG +HG G EA+ F+ M + ++P+E++FI+IL AC H GL+
Sbjct: 510 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 569
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +FN+M++ IEPK E Y C++DLL RAG L +A K ++ MP E +A IWG+LL
Sbjct: 570 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLC 629
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
IY DV+L E +H+ +LEP N+G Y +L+NIYA +W E K+R+ + G++K
Sbjct: 630 GCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKN 689
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCS+IE+ +VH FV GD+SHP +++ +L K +MK H ++++D
Sbjct: 690 PGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKAD 745
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 150/295 (50%), Gaps = 23/295 (7%)
Query: 11 FWNTMVAGYAKVGD------------------LNNARALFELMTEKNVISWTTLIAGYAQ 52
WN ++ GYAK+G+ + +AR LF+ + +++VISW ++I+GY
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228
Query: 53 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 112
+ + LF +M + + D M++ ++ C+ G + LG +H Y + + L
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
NN L+DMY+KSG + A+QVFE M +SV++WT+MIAG A GL ++ +F ME+ +
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
P+ T IL AC GL+E G+ N +K ++ + ++D+ + G + +A
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKEN-KMQSDLFVSNALMDMYAKCGSMGDAH 407
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 287
+ M + + W +++ Y L AL ++++ ++ N ++ I
Sbjct: 408 SVFSEMQVK-DIVSWNTMIGG---YSKNSLPNEALNLFVEMQYNSKPNSITMACI 458
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 57/246 (23%)
Query: 62 LFRRMQVENVKPDEIAML----AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
L R M++ N P L + L CA L +++ G IH+ I+ + L + L+
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--------ER 169
MY G + + ++F+ + N+ V W ++ G A G RE+L +F RM E
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 170 ARVKPNEI-----------------------------------------TFIAILSACCH 188
AR +E+ T +++++ C +
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 189 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
G++ LGR +K+ +G E + C++D+ ++G L A ++ M E + W
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMG-ERSVVSW 320
Query: 248 GSLLAA 253
S++A
Sbjct: 321 TSMIAG 326
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 225/348 (64%), Gaps = 7/348 (2%)
Query: 12 WNTMVAGYAKVGDLNN---ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
WN+++AGY K GD+ A LF M EK+++SW+ LI+GY Q EA+ +F M
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI----DMYAKSG 124
++ DE+ +++ LSACA L V+ G+ IH + + G+ + V L NALI DMY K G
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCG 317
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ AL+VF M+ K V +W +I GLA++GL +LDMFS M+ V PNEITF+ +L
Sbjct: 318 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 377
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H+GLV+ GR +F M ++GIEP ++ YGCM+DLLGRAG L EAEKL+ MP +
Sbjct: 378 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 437
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
A WG+LL A +GD E+GE + LI+L+P + G + +LSNI+A G W + ++R +M
Sbjct: 438 ATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMM 497
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ GV K PGCS IE + VHEF+AGD +HP +++ +L ++ ++K
Sbjct: 498 KQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 545
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 46/298 (15%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SRLL ++ G L+ + +F+ + N W T++ Y Q + +A+
Sbjct: 62 FAASRLLKFSTDSPFIG------LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALL 115
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L++ M NV PD + ACA G+ IH+++ + G ++ V + N LI+MYA
Sbjct: 116 LYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYA 175
Query: 122 -------------------------------KSGKIGKALQ---VFENMKNKSVITWTTM 147
K G +G+ ++ +F M K +++W+ +
Sbjct: 176 VCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSAL 235
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I+G +G+ EAL MF M ++ +E+ +++LSAC H+ +V+ G+ ++ R G
Sbjct: 236 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV-IRMG 294
Query: 208 IEPKIEQYGCMI----DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
IE + +I D+ + G ++ A ++ M E + W +L+ + G VE
Sbjct: 295 IESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 351
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 216/334 (64%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G+++ AR +F+ M K+V++W ++ GYA P EA+ LF MQVE ++PD +
Sbjct: 222 YVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTV 281
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG + ++ + L ALIDMYAK G G+A VF+ M+N
Sbjct: 282 AGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRN 341
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +I W MI GL + G + A + +M+++ + N+ TFI +L +C H GLV+ GRRY
Sbjct: 342 RDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRY 401
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M Y I P+IE YG M+DLL RAG LQEA +L++ MP EANA +WG+LL I+
Sbjct: 402 FRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHR 461
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ +L E L+ LI+LEP NSGNY +LSNIY+ GRW ++ K+R M+ GV+K+P S++
Sbjct: 462 NADLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWV 521
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E+ +VHEF GD SHP D++Y L ++ +MK
Sbjct: 522 ELDGKVHEFHVGDKSHPLSDQIYAKLDELGMEMK 555
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 2/221 (0%)
Query: 19 YAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA+ G L++A+ F+ M + + +SWT LI Y + EAI + R V+PD
Sbjct: 120 YARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFT 179
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L+ACA++ + GE + E+ G+ V + A +D+Y K G++ KA VF+ MK
Sbjct: 180 AVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMK 239
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
NK V+ W M+ G A +G REAL++F M+ ++P+ T LSAC +G ++LGRR
Sbjct: 240 NKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRR 299
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+++ + + +ID+ + G EA + ++M
Sbjct: 300 VVGMLQWDEVLGNPVLGT-ALIDMYAKCGSTGEAWMVFQKM 339
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 216/337 (64%), Gaps = 2/337 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++++ YAK G + +AR +F+ M ++N + WT++I+GY Q+ Q EAI LFR MQ+ VK
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + +S+C Q+GA++LG ++H Y + +GL + + N+LIDMY+K G I KA +
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGL 191
F M + +WT +I G A +GL EALD+F++ME V PNEITF+ +L++C H GL
Sbjct: 355 FCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 413
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R+F+ M S YGI P+IE YGCM+DLLGRA L EAE+ ++ MP +A +W SLL
Sbjct: 414 VEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 473
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A G+V L E + + LEP+ G +LS +YA RW ++ K+R + K
Sbjct: 474 FACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTK 533
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PGCS+IEV VHEF AGD SH + + +Y L IN
Sbjct: 534 QPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLGIN 570
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 125/228 (54%), Gaps = 3/228 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ + AR++ + + + +SW T+IAGY PN+A+ F +M
Sbjct: 132 NTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQ 191
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D++ +L AL ACA+ +++G+ H + G + ++LI MYAK G++ A
Sbjct: 192 VMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDAR 251
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M +++ + WT+MI+G G +EA+ +F M+ A VK ++ T ++S+C +G
Sbjct: 252 RIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMG 311
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++LG RY + +G+ I +ID+ + G +++A + M
Sbjct: 312 ALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGM 358
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D ++ AALS A++ +V +G +H + GL++ + N LI+MY+ A V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 134 ENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
++ ++W T+IAG GL +AL FS+M + +V +++T + L AC +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+++G+ ++ + G E +I + + G +++A ++ MP + NA W S++
Sbjct: 212 MKVGKLCHALLVTN-GFEINCYMGSSLISMYAKCGQVEDARRIFDGMP-DRNAVCWTSMI 269
Query: 252 AASNIYGDVELGE 264
+ G +LG+
Sbjct: 270 S-----GYTQLGQ 277
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 221/340 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T+V YAK G + AR++F+ M EK++++W+T+I GYA P E I F +M EN+K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLK 310
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ +++ LS+CA LGA++LGEW + I+++ T + + NALIDMYAK G + + +V
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++ I+GLA +G + + +F + E+ + P+ TF+ +L C H GL+
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+FN + Y ++ +E YGCM+DL GRAG L +A +L+ MP NA +WG+LL+
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ D +L E L+ LI LEP N+GNY LSNIY++ GRW+E+ ++R +M G+KK+
Sbjct: 491 GCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKI 550
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IE+ VHEF+A D SHP D++Y L + +M+
Sbjct: 551 PGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 137/240 (57%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y+ G LN+A +FE + E++V++WT L +GY + EAI LF++M V+
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSAC +G ++ GEWI ++E+ + + L+++YAK GK+ KA V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M K ++TW+TMI G A + +E ++ F +M + +KP++ + + LS+C +G +
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE----ANAAIWG 248
+LG +++ R+ + +ID+ + G + ++ + M + NAAI G
Sbjct: 330 DLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
LF N+ + TLI G+ +E + LF ++ + L AC +
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
+LG +H+ + + G N V +L+ +Y+ SG++ A +VFE + +SV+TWT + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G REA+D+F +M V+P+ + +LSAC HVG ++ G I+K +E
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEW---IVKHMEEMEM 243
Query: 211 KIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECA 266
+ + +++L + G +++A + M E + W +++ ASN + E E
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMG-EKDIVTWSTMIQGYASNSFPK-EGIEFF 301
Query: 267 LQHLIK-LEPHNSGNYAILSNIYAI----LGRWNES 297
LQ L + L+P LS+ ++ LG W S
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 206/309 (66%)
Query: 47 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 106
+AG+ EA+ LF RMQ + V PD+ ++ L ACAQLG +E G+W+H Y++ +
Sbjct: 108 LAGFLLAGDGREALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANNI 167
Query: 107 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
V L AL+DMYAK G++ A++VF+ MK K+V+ WTTMI GLA+HG G EAL++FS+
Sbjct: 168 RITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQ 227
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
MER VKP++I FI L AC H GLV+ GR F+ M +YGI+PKIE YGCM+DLL R G
Sbjct: 228 MERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNG 287
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 286
L EA +++ +MP + +A IWG+L+A + +VEL E ++H I+LEP SG Y +L N
Sbjct: 288 LLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGN 347
Query: 287 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 346
IYA GR + +IR +MR+ GV K PGCS +E+ +H+F+ GD SHP + + +
Sbjct: 348 IYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDE 407
Query: 347 INGQMKFAE 355
I+ +++ E
Sbjct: 408 IDSRIRLEE 416
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
R+ +V YAK G++ A +F++M EKNV++WTT+I G A + +EA+ LF +
Sbjct: 168 RITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQ 227
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ VKPD+IA + AL AC G V+ G E + + +YG+ + ++D+ A++G
Sbjct: 228 MERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNG 287
Query: 125 KIGKALQVFENMKNK-SVITWTTMIAGLALH 154
+ +A ++ E M K + W ++AG H
Sbjct: 288 LLNEAREMVEKMPMKPDALIWGALMAGCRFH 318
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 234/366 (63%), Gaps = 27/366 (7%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++++ Y+ G++ +A +F+ + KN+ISWT++I+ Y +PN+A+ LFR+MQ+++V+P
Sbjct: 110 SLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQP 169
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D + + ALSACA LGA+++GEWIH YI GL+T + LNN+LI+MY+K G+IG A ++F
Sbjct: 170 DIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLF 229
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----ERAR------------VKPNEI 177
+ + K V TWT+MI G ALHG EAL +F+ M +RAR V PN++
Sbjct: 230 DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDV 289
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
TF+ +L AC H GLVE G+++F MK Y + P+I +GCM+DLL RAG L EA + + +
Sbjct: 290 TFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILK 349
Query: 238 MPFEANAAIWGSLLAASNIYGD--------VELGECALQHLIKLEPHNSGNYAILSNIYA 289
MP NA +W +LL A ++ GD +++ A + L++LEP + G+ I+SN+YA
Sbjct: 350 MPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNLYA 409
Query: 290 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 349
G W++ +R ++ ++ PGCS IEV + EFVA D HP ++Y+IL +
Sbjct: 410 AKGMWDKKMLVRNQIKQ---RRDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEILDHLTR 466
Query: 350 QMKFAE 355
M+ ++
Sbjct: 467 TMRASD 472
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 50 YAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 108
Y Q ++ + FR + +N D +++ AL AC ++ G+ +H + +G
Sbjct: 44 YLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEP 103
Query: 109 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
I+ L +LI MY+ +G + A +F+ + +K++I+WT++I+ + +AL +F +M+
Sbjct: 104 IIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQ 163
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
V+P+ +T LSAC +G +++G ++ R G++ + +I++ + G +
Sbjct: 164 MDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHR-GLDTDLCLNNSLINMYSKCGEI 222
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
A +L + + W S++ ++G E
Sbjct: 223 GTARRLFDGTQ-KKDVTTWTSMIVGHALHGQAE 254
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
N+++ Y+K G++ AR LF+ +K+V +WT++I G+A Q EA+ LF M+ N
Sbjct: 210 NSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 269
Query: 71 --------------VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNA 115
V P+++ + L AC+ G VE G + + E Y L +
Sbjct: 270 ARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 329
Query: 116 LIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++D+ ++G + +A + M + + W T++ +L G
Sbjct: 330 MVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQG 370
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 227/347 (65%), Gaps = 5/347 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M++GYAKVGD+ AR LF+ K+ W ++I+GY Q + E + +FR MQ +
Sbjct: 174 WTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGL 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE +++ L ACA LGA+E+G W+H Y++Q G V L+ LIDMYAK G + A +
Sbjct: 234 EPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKK 293
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + I W MI+G+A++G G AL +FS ME+A VKP++ITFIAI +AC + G+
Sbjct: 294 LFDGMSQRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGM 353
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN----AAIW 247
R N M + Y +EPK E YGC++DLLGRAG L+EA++L+ +MP ++ A W
Sbjct: 354 AHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAW 413
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+LL+A +G E+ E A Q L LE H+SG Y +LSN+YA G+ + +IRK+M +
Sbjct: 414 RALLSACCSHGQTEVAEDAAQRLFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENR 472
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
GV K PGCS ++++ VHEF+AG+ +H + ++++L K+N QM ++
Sbjct: 473 GVDKAPGCSSVKINGVVHEFIAGEETHLQMEEVHRVLEKMNKQMGYS 519
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LSRLL + G L +A LF+ + + T+I + + I
Sbjct: 38 FALSRLL------AFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIKAFVLKGKLINTIQ 91
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
++ +M + PD + L ACA L + LGE H + G + + N LI MY+
Sbjct: 92 IYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYS 151
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------------------- 155
G + A +F+ M + ++WT MI+G A G
Sbjct: 152 SFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISG 211
Query: 156 -----LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYG 207
+E L MF M+ ++P+E ++IL AC H+G +E+G RY + + G
Sbjct: 212 YVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWVHRYLD----QLG 267
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ +ID+ + G L A+KL M + + W ++++ + GD G+ AL
Sbjct: 268 HPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMS-QRDTICWNAMISGMAMNGD---GDNAL 323
Query: 268 QHLIKLE 274
+ ++E
Sbjct: 324 RLFSEME 330
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 219/347 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 331
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++V
Sbjct: 332 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 391
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV
Sbjct: 392 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 451
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 452 DEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 511
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+
Sbjct: 512 ASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKV 571
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 572 PGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 618
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL ++ Y+K G + A +F+ M E+NV +WT+ ++G A + + LF+R
Sbjct: 366 RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKR 425
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSG 124
M+ V+P+ + + L C+ G V+ G + ++ +G++ + ++D+Y ++G
Sbjct: 426 MESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAG 485
Query: 125 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
++ A+ M W ++ +H LG+ A+D +E
Sbjct: 486 RLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 533
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 222/336 (66%), Gaps = 12/336 (3%)
Query: 12 WNTMVA--GYAKVGD----------LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
WN M+A G+ + GD ++ A ++F ++ ++V+ W ++I+ AQ + A
Sbjct: 282 WNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNA 341
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ L R M + NV+ + + M++AL AC++L A+ G+ IH +I + GL+T + N+LIDM
Sbjct: 342 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 401
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y + G I K+ ++F+ M + +++W MI+ +HG G +A+++F + +KPN ITF
Sbjct: 402 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITF 461
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+LSAC H GL+E G +YF +MK+ Y ++P +EQY CM+DLL RAG E + + +MP
Sbjct: 462 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 521
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
FE NAA+WGSLL A I+ + +L E A ++L +LEP +SGNY +++NIY+ GRW ++ K
Sbjct: 522 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 581
Query: 300 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 335
IR +M++ GV K PGCS+IEV +++H FV GDTSHP
Sbjct: 582 IRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 617
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 155/333 (46%), Gaps = 27/333 (8%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y + G + +AR +F+ M+E+NV SWT ++ Y + E I LF M E V+PD
Sbjct: 55 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 114
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AC++L +G+ +++Y+ G + +++DM+ K G++ A + FE ++
Sbjct: 115 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 174
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V W M++G G ++AL++F +M VKPN IT + +SAC ++ L+ GR
Sbjct: 175 KDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 234
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI-- 256
++ + ++D + ++ A + M + + W ++LA +
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAVTGFTQ 293
Query: 257 YGDVELGECALQHLIKLE-------PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG- 308
YGD G+ AL+ ++ ++ + + ++I + + S ++R+M
Sbjct: 294 YGD---GKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL 350
Query: 309 ----------VKKMPGCSYIEV---SKRVHEFV 328
V +P CS + K +H+F+
Sbjct: 351 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 383
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 77/291 (26%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GY G+ +A+ +FR+M +E V
Sbjct: 180 WNIMVSGYTSKGEF-------------------------------KKALNVFRKMVLEGV 208
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKI---- 126
KP+ I + +A+SAC L + G IH Y I+ L++ + + N+L+D YAK +
Sbjct: 209 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 268
Query: 127 ----------------------------GK-----------ALQVFENMKNKSVITWTTM 147
GK A VF + + V+ W ++
Sbjct: 269 RKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSI 328
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I+ A G ALD+ M + V+ N +T ++ L AC + + G+ + R G
Sbjct: 329 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCG 387
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++ +ID+ GR G +Q++ ++ MP + + W +++ ++G
Sbjct: 388 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGMHG 437
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 73 PDEIAMLAA--LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PDE + A L C +L + LG +H + G++ L + L+++Y ++G + A
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M ++V +WT ++ G E + +F M V+P+ F + AC +
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+G+ ++ M S G E G ++D+ + G + A + + F+ + +W +
Sbjct: 126 NYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIM 183
Query: 251 LAASNIYGDVE 261
++ G+ +
Sbjct: 184 VSGYTSKGEFK 194
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 227/352 (64%), Gaps = 13/352 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ-------------MDQPNEA 59
N+++ YAK G L +R LF+ ++E ++ +W T++A YAQ D EA
Sbjct: 144 NSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEA 203
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ LF MQ+ +KP+E+ ++A +SAC+ LGA+ G W H Y+ + L + AL+DM
Sbjct: 204 LHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDM 263
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y+K G + A Q+F+ + ++ + MI G A+HG G +AL+++ M+ + P+ T
Sbjct: 264 YSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATI 323
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ + AC H GLVE G F MK +G+EPK+E YGC+IDLLGRAG L+EAE+ L+ MP
Sbjct: 324 VVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMP 383
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
+ NA +W SLL A+ ++G++E+GE AL+HLI+LEP SGNY +LSN+YA +GRWN+ +
Sbjct: 384 MKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKR 443
Query: 300 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
+R +M+D GV K+PG S +E++ +HEF+ GD +HP +Y + +IN ++
Sbjct: 444 VRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRL 495
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 16/184 (8%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQV-ENVKPDEIAMLAALSAC 85
A +F + + + TLI+ DQ + A +L+ + + ++P+ + AC
Sbjct: 55 AFTIFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKAC 114
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
A ++ G +H ++ ++ P + N+L++ YAK GK+ + +F+ + + TW
Sbjct: 115 ASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATW 174
Query: 145 TTMIAGLALHG-------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
TM+A A + EAL +F M+ +++KPNE+T +A++SAC ++G
Sbjct: 175 NTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGA 234
Query: 192 VELG 195
+ G
Sbjct: 235 LSQG 238
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 223/333 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT+++G + G + A +F+ M + +SWT LI G + + +EAI FR M ++ V
Sbjct: 84 YNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGV 143
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++A +SACA++GA+ LG W+H + + GL V + N+LIDMYA+ G++ A Q
Sbjct: 144 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 203
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ ++V++W +MI G A +G +A++ F M R KP+ +TF +L+AC H GL
Sbjct: 204 VFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGL 263
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RY+++M++ YGI ++E YGC++DLLGR+G L+EA +++ MP N + G+LL
Sbjct: 264 TDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALL 323
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV + E +QHL++L+P NY +LSNIYA +G+W+ +GK+R +M+ G++K
Sbjct: 324 AGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRK 383
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 384 RPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 416
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 43/229 (18%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGK 128
P+++ +L LSACA + L + + L + P L+ L+ Y S
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLK-LFPSHLLLSTCLVRFYFASRLPHL 68
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGL-----------------------------GR- 158
ALQ+F+ M +S +T+ T+I+GL +GL GR
Sbjct: 69 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 128
Query: 159 -EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA+D F M V+P+ +T IA++SAC VG + LG + + + R G+E +
Sbjct: 129 DEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG-MWVHRLVVRQGLERNVRIANS 187
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
+ID+ R G ++ A ++ M + W S+ I G G CA
Sbjct: 188 LIDMYARCGQVELARQVFSGM-RKRTVVSWNSM-----IVGFAANGRCA 230
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 219/343 (63%), Gaps = 3/343 (0%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FTLS +L + M Y K GD+ +AR++F+ K+++ W+ +I+ YAQ + +EA
Sbjct: 359 FTLSLVLATAFIDM---YGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFD 415
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F M ++P+E M++ L CA+ G++E+G+WIH+YI++ G+ + L + +DMYA
Sbjct: 416 IFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G I A ++F ++ + W MI+G A+HG G AL++F ME V PN+ITFI
Sbjct: 476 NCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIG 535
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
L AC H GL++ G+R F+ M +G PK+E YGCM+DLLGRAG L EA +L++ MP
Sbjct: 536 ALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
N A++GS LAA ++ +++LGE A + + LEPH SG ++SNIYA RW + IR
Sbjct: 596 PNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIR 655
Query: 302 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ M+D G+ K PG S IEV+ +HEF+ GD HPD ++Y+++
Sbjct: 656 RAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMI 698
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K +L AR +F+ +++ ++ISWT +IA Y + NE + LF +M E + P+EI M
Sbjct: 272 YVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITM 331
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L+ + C GA+ELG+ +H + + G + L A IDMY K G + A VF++ K+
Sbjct: 332 LSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKS 391
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K ++ W+ MI+ A + EA D+F M ++PNE T +++L C G +E+G ++
Sbjct: 392 KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KW 450
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + GI+ + +D+ G + A +L + + ++W ++++ ++G
Sbjct: 451 IHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEAT-DRDISMWNAMISGFAMHG 509
Query: 259 DVELGECALQHLIKLE 274
GE AL+ ++E
Sbjct: 510 H---GEAALELFEEME 522
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++VG L AR LF+ + K+V+SW+T+I Y + +EA+ L R M V VK
Sbjct: 163 NALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVK 222
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDMYAKSGKIGKAL 130
P EI M++ A+L ++LG+ +H Y+ + G + VPL ALIDMY K + A
Sbjct: 223 PSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYAR 282
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + S+I+WT MIA E + +F +M + PNEIT ++++ C G
Sbjct: 283 RVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAG 342
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ELG + + R G + ID+ G+ G ++ A + + +W ++
Sbjct: 343 ALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK-SKDLMMWSAM 400
Query: 251 LAA 253
+++
Sbjct: 401 ISS 403
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
LI Y + + P +A ++ M+ + + D + + L AC + + LG+ +H ++ + G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
+ V + NALI MY++ G + A +F+ ++NK V++W+TMI GL EALD+
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M RVKP+EI I+I + ++LG+ + +M++ + + +ID+ +
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
L A ++ + +A+ W +++AA
Sbjct: 275 CENLAYARRVFDGLS-KASIISWTAMIAA 302
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 234/345 (67%), Gaps = 1/345 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-E 69
WN M+ GY ++GD AR LF+ M +++V+SW T+I+GY+Q +A+ +FR M+ E
Sbjct: 203 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGE 262
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+++P+ + +++ L A ++LG++ELGEW+H Y E G+ L +ALIDMY+K G I KA
Sbjct: 263 DIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 322
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ VFE + ++VITW+ MI G A+HG +A+D F +M +A V+P+++ +I +L+AC H
Sbjct: 323 IMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHA 382
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GRRYF+ M S G+EP+IE YGCM+DLLGR G L EAE+ + MP + + IW +
Sbjct: 383 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKA 442
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +VE+G+ L+ + PH+SG Y LSN+YA G W+E ++R M++M +
Sbjct: 443 LLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDI 502
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+K PGCS+I++ +HEF+ D SHP + +L +I+ +++ A
Sbjct: 503 RKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLA 547
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 51/284 (17%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--AITLF-RRMQVENVKPDEIAMLA 80
DL+ A +F M ++N SW T+I G+++ D+ AITLF M E ++P+ +
Sbjct: 67 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI-- 109
L ACA+ G ++ G+ IH +YG N I
Sbjct: 127 VLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIER 186
Query: 110 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
V L N +ID Y + G A +F+ M+ +SV++W TMI+G + +G
Sbjct: 187 EMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNG 246
Query: 156 LGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
++A+++F M++ ++PN +T +++L A +G +ELG + ++ GI
Sbjct: 247 FFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVL 305
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +++A + R+P E N W +++ I+G
Sbjct: 306 GSALIDMYSKCGIIEKAIMVFERLPRE-NVITWSAMINGFAIHG 348
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
W+TMV GY+K GD+ AR +F+ M KNV++WT +IAGYA+ EA L +M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+K D A+++ L+AC + G + LG IH+ +++ L + + NAL+DMYAK G + KA
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF ++ K +++W TM+ GL +HG G+EA+++FSRM R ++P+++TFIA+L +C H
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL++ G YF M+ Y + P++E YGC++DLLGR G L+EA K+++ MP E N IWG+
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +V++ + L +L+KL+P + GNY++LSNIYA W IR M+ MGV
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+K G S +E+ +HEF D SHP D++YQ+L
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 43/249 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ G K G+L +AR LF+ M ++++ISW T++ GYA+ + ++A LF +M N
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNT 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W + ++ Y+K+G + A
Sbjct: 248 V----------------------SW-----------------STMVMGYSKAGDMEMARV 268
Query: 132 VFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F+ M K+V+TWT +IAG A GL +EA + +M + +K + I+IL+AC
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL+ LG R +I+K R + ++D+ + G L++A + +P + + W +
Sbjct: 329 GLLSLGMRIHSILK-RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNT 386
Query: 250 LLAASNIYG 258
+L ++G
Sbjct: 387 MLHGLGVHG 395
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N A +F + E NV +LI +AQ QP +A +F MQ + D L AC
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQVFENMKNKSVIT 143
+ + + + +HN+IE+ GL++ + + NALID Y++ G +G A+++FE M + ++
Sbjct: 128 SGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +M+ GL G R+A RR F+ M
Sbjct: 188 WNSMLGGLVKAGELRDA-----------------------------------RRLFDEMP 212
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
R I + M+D R + +A +L +MP E N W +++ + GD+E+
Sbjct: 213 QRDLI-----SWNTMLDGYARCREMSKAFELFEKMP-ERNTVSWSTMVMGYSKAGDMEMA 266
Query: 264 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ L N + I+ YA G E+ ++ M G+K
Sbjct: 267 RVMFDKM-PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L CA L V+ +H I + L+ + + LI + + A++VF ++
Sbjct: 23 LQDLPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE 79
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V ++I A + +A +FS M+R + + T+ +L AC + + +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYL--QEAEKLLRRMPFEANAAIWGSLLAASNI 256
N ++ + G+ I +ID R G L ++A KL +M E + W S+L
Sbjct: 140 HNHIE-KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG---- 193
Query: 257 YGDVELGE 264
G V+ GE
Sbjct: 194 -GLVKAGE 200
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 219/347 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 331
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++V
Sbjct: 332 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 391
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV
Sbjct: 392 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 451
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 452 DEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 511
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+
Sbjct: 512 ASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKV 571
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 572 PGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 618
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL ++ Y+K G + A +F+ M E+NV +WT+ ++G A + + LF+R
Sbjct: 366 RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKR 425
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSG 124
M+ V+P+ + + L C+ G V+ G + ++ +G++ + ++D+Y ++G
Sbjct: 426 MESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAG 485
Query: 125 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
++ A+ M W ++ +H LG+ A+D +E
Sbjct: 486 RLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 533
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 220/348 (63%), Gaps = 1/348 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY ++G+L A +LF M K++ISWTT+I GY++ + EAI +F +M E +
Sbjct: 976 WNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGI 1035
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL
Sbjct: 1036 IPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALL 1095
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF N+ K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GL
Sbjct: 1096 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGL 1155
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GRR + M Y I +E YGCM+ L +AG + EA +L+ M FE NA IWG+LL
Sbjct: 1156 VEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALL 1215
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+ ++E+ E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K
Sbjct: 1216 DGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1275
Query: 312 M-PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+ PG S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 1276 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYEQMGLAGYVQ 1323
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 18/257 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + + L+ A + M + NV + LI G+ P ++ + RM ++V
Sbjct: 816 NQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRMLRDSVS 875
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + A A A GE + +I ++G V + LI Y+ SG+I +A +V
Sbjct: 876 PSSYTYSSLVQASA--FASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKV 933
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP--NEITFIAILSACCHVG 190
F+ M + +TWTTM++ R+ LDM S A P NE T+ ++ +G
Sbjct: 934 FDEMPERDDVTWTTMVSAY------RQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLG 987
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIW 247
+EL FN M + I + MI+ R +EA + +M E +
Sbjct: 988 NLELAESLFNQMPVK-----DIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTM 1042
Query: 248 GSLLAASNIYGDVELGE 264
++++A G +E+G+
Sbjct: 1043 STVISACAHLGVLEIGK 1059
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 219/347 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 265 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 324
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++V
Sbjct: 325 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 384
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV
Sbjct: 385 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 444
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 445 DEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 504
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+
Sbjct: 505 ASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKV 564
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 565 PGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 611
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL ++ Y+K G + A +F+ M E+NV +WT+ ++G A + + LF+R
Sbjct: 359 RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKR 418
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSG 124
M+ V+P+ + + L C+ G V+ G + ++ +G++ + ++D+Y ++G
Sbjct: 419 MESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAG 478
Query: 125 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
++ A+ M W ++ +H LG+ A+D +E
Sbjct: 479 RLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 526
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 215/337 (63%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV GY+K GD++ AR LF+ KNV+ WTT+IAGYA+ EA L+ +M+ +
Sbjct: 253 WSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGM 312
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ +L+ L+ACA+ G + LG+ IH + ++ + NA IDMYAK G + A
Sbjct: 313 RPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFD 372
Query: 132 VFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M K V++W +MI G A+HG G +AL++FS M + +P+ TF+ +L AC H G
Sbjct: 373 VFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAG 432
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR+YF M+ YGI P++E YGCM+DLLGR G+L+EA LLR MP E NA I G+L
Sbjct: 433 LVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTL 492
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ DV+L + L KLEP + GNY++LSNIYA G W +R M++ G +
Sbjct: 493 LNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGE 552
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K G S IEV + VHEF D SHP D +YQ++ ++
Sbjct: 553 KPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRL 589
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 23/260 (8%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRRMQVENVKP 73
++A ++ L +A +F + NV + ++I +A F +MQ + P
Sbjct: 59 LIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFP 118
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQ 131
D L AC+ ++ L IH ++E+ G + + N+LID Y++ G G A+
Sbjct: 119 DNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMS 178
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M+ + V+TW +MI GL G + A +F M + +++ +L G
Sbjct: 179 LFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMP----DRDMVSWNTMLDGYAKAGE 234
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ F M R I + M+ + G + A L R P + N +W +++
Sbjct: 235 MDTAFELFERMPWR-----NIVSWSTMVCGYSKGGDMDMARMLFDRCPVK-NVVLWTTII 288
Query: 252 A----------ASNIYGDVE 261
A A+ +YG +E
Sbjct: 289 AGYAEKGLAREATELYGKME 308
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 220/340 (64%), Gaps = 2/340 (0%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L Y + ++ Y K GDL +AR +F+ M +K+ ++W +I GYAQ EAI LF+ M
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM 320
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
++ + PD+I ++ LSACA +GA++LG+ + Y + G V + AL+DMYAK G +
Sbjct: 321 RMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSL 380
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILS 184
A +VF M K+ ++W MI+ LA HG +EAL +F M E V PN+ITF+ +LS
Sbjct: 381 DNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ GRR F++M S +G+ PKIE Y CM+DL RAG+L+EA + MP + +
Sbjct: 441 ACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDE 500
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
I G+LL A ++++ E ++ L++LEP NSGNY I S +YA L RW++S ++R +M
Sbjct: 501 VILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLM 560
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ GV K PGCS+I+++ ++HEF AGD H ++ ++QIL
Sbjct: 561 KQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQIL 600
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 148/249 (59%), Gaps = 2/249 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ G + +AR +F+ +++K+++SW ++I+GY++M EA+ LFR M +
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+++++ L AC +LG ++LG W+ ++ + + + +ALI MY K G + A ++
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++MK K +TW MI G A +G+ EA+ +F M + P++IT I ILSAC +G +
Sbjct: 286 FDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG++ I S G + + ++D+ + G L A ++ MP + N W ++++
Sbjct: 346 DLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP-KKNEVSWNAMIS 403
Query: 253 ASNIYGDVE 261
A +G +
Sbjct: 404 ALAFHGQAQ 412
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENV 71
N+ + A + D A F + + S+ +I G + ++ + A+ + RM+ +
Sbjct: 64 NSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL 123
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ + AC+ L AVE G H + + GL+ ++++LI MYA+ GK+G A +
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + K +++W +MI+G + EA+ +F M A +PNE++ +++L AC +G
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD 243
Query: 192 VELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
++LG + +E K+ +I + G+ G L A ++ M + + W
Sbjct: 244 LKLG-----TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
Query: 248 GSLLAA 253
+++
Sbjct: 298 NAMITG 303
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 227/332 (68%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K D+ +A+ +F + EK+V+SWT++++G A+ EA+ LF++MQ+ ++
Sbjct: 252 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIE 311
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DEI ++ LSACAQ GA++ G++IH I+++ +N + L AL+DMYAK G I ALQV
Sbjct: 312 LDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQV 371
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M+ ++V TW +I GLA+HG G +A+ +F +ME ++ P+++TFIA+L AC H GLV
Sbjct: 372 FRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLV 431
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G F MK+++ IEP++E YGC++DLL RA + +A + MP +AN+ +W +LL
Sbjct: 432 DEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLG 491
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A G +L E + +I+LEP + G Y +LSN+YA + +W+ + K+RK M++ G++K
Sbjct: 492 ACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKT 551
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H+FVAGD SH +++Y ++
Sbjct: 552 PGCSWIELNGMIHQFVAGDRSHLQTEQIYAMI 583
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 146/250 (58%), Gaps = 3/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
N ++ Y G A +F+ T ++V++W +I + +A L M +++N+
Sbjct: 150 NALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNL 209
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+ M++ + ACAQLG +E G+++H+Y ++ GL+ + +NNA++DMY K I A +
Sbjct: 210 RPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQE 269
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K V++WT+M++GLA G +EAL +F +M+ +++ +EIT + +LSAC G
Sbjct: 270 VFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGA 329
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G +Y +++ ++ I + ++D+ + G + A ++ RRM N W +L+
Sbjct: 330 LDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALI 387
Query: 252 AASNIYGDVE 261
++G E
Sbjct: 388 GGLAMHGHGE 397
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 3/232 (1%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDLN AR LF M + T+I GYA+ P EA++L+ M V D L
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ACA+LGAV+LG H + + G + + + NALI Y G G A VF+ + V+
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178
Query: 143 TWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
TW MI GL +A D+ M + ++P+E+T ++++ AC +G +E G ++ +
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG-KFLHS 237
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G++ + ++D+ + ++ A+++ R+ E + W S+L+
Sbjct: 238 YSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR-EKDVLSWTSMLSG 288
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
+ SG + A ++F M+N TMI G A EA+ ++ M V + T+
Sbjct: 56 SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115
Query: 181 AILSACCHVGLVELGRRYF-NIMKSRYG 207
+L+AC +G V+LGRR+ ++K+ +G
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFG 143
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 223/333 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT+++G + G + A +F+ M + +SWT LI G + + +EAI FR M ++ V
Sbjct: 139 YNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGV 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++A +SACA++GA+ LG W+H + + GL V + N+LIDMYA+ G++ A Q
Sbjct: 199 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ ++V++W +MI G A +G +A++ F M R KP+ +TF +L+AC H GL
Sbjct: 259 VFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGL 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RY+++M++ YGI ++E YGC++DLLGR+G L+EA +++ MP N + G+LL
Sbjct: 319 TDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVTTMPMRPNEVVLGALL 378
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV + E +QHL++L+P NY +LSNIYA +G+W+ +GK+R +M+ G++K
Sbjct: 379 AGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRK 438
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 439 RPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 471
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSACAQLGAVELGEW 96
+V SWT+ IA A+ A M P +++ +L LSACA + L
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 88
Query: 97 IHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
+ + L + P L+ L+ Y S ALQ+F+ M +S +T+ T+I+GL
Sbjct: 89 LALSVHARVLK-LFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 147
Query: 153 LHGL-----------------------------GR--EALDMFSRMERARVKPNEITFIA 181
+GL GR EA++ F M V+P+ +T IA
Sbjct: 148 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIA 207
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
++SAC VG + LG + + + R G+E + +ID+ R G ++ A ++ M +
Sbjct: 208 VISACAEVGALGLG-MWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGM-RK 265
Query: 242 ANAAIWGSLLAASNIYGDVELGECA 266
W S+ I G G CA
Sbjct: 266 RTVVSWNSM-----IVGFAANGRCA 285
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 223/333 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT+++G + G + A +F+ M + +SWT LI G + + +EAI FR M ++ V
Sbjct: 173 YNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGV 232
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++A +SACA++GA+ LG W+H + + GL V + N+LIDMYA+ G++ A Q
Sbjct: 233 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 292
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ ++V++W +MI G A +G +A++ F M R KP+ +TF +L+AC H GL
Sbjct: 293 VFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGL 352
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RY+++M++ YGI ++E YGC++DLLGR+G L+EA +++ MP N + G+LL
Sbjct: 353 TDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALL 412
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV + E +QHL++L+P NY +LSNIYA +G+W+ +GK+R +M+ G++K
Sbjct: 413 AGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRK 472
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 473 RPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 505
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSACAQLGAVELGEW 96
+V SWT+ IA A+ A M P +++ +L LSACA + L
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 122
Query: 97 IHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
+ + L + P L+ L+ Y S ALQ+F+ M +S +T+ T+I+GL
Sbjct: 123 LALSVHARVLK-LFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 181
Query: 153 LHGL-----------------------------GR--EALDMFSRMERARVKPNEITFIA 181
+GL GR EA+D F M V+P+ +T IA
Sbjct: 182 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIA 241
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
++SAC VG + LG + + + R G+E + +ID+ R G ++ A ++ M +
Sbjct: 242 VISACAEVGALGLG-MWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGM-RK 299
Query: 242 ANAAIWGSLLAASNIYGDVELGECA 266
W S+ I G G CA
Sbjct: 300 RTVVSWNSM-----IVGFAANGRCA 319
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 223/344 (64%), Gaps = 5/344 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV+GYAK GD+ +A LF M EKN +SWT LI+GYA+ ++A+ LF +M + +V
Sbjct: 261 WTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHV 320
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
+PD+ + L ACA + +++ G+ IH Y+ + + NTIV +ALIDMY+K G +G
Sbjct: 321 RPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVV--SALIDMYSKCGSLGIG 378
Query: 130 LQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+VF+ M NK V+ W T+I+ LA HG G EA+ M M R+ KP++ITF+ IL+AC H
Sbjct: 379 RKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSH 438
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLV+ G +F M YGI P E Y C+IDLLGRAG +E L +MP++ + +W
Sbjct: 439 SGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWN 498
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL I+G +ELG A + LI+LEP +S Y +LS+IYA+LGRW K+R++M +
Sbjct: 499 ALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQ 558
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
VKK S++E+ +VH F D+SHP +++Y +L ++ GQM+
Sbjct: 559 VKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQME 602
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 148/297 (49%), Gaps = 36/297 (12%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
+R LY WN M++GYAK+G + AR LF+ M EK+V+SW T++ +AQ +EA+ +
Sbjct: 123 ARNLYS-WNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYS 181
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+ ++ + + L+ C +L V L +H I G + V L+++++D Y K G
Sbjct: 182 EFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCG 241
Query: 125 KIGKALQVFENMKNKSVITWTTM-------------------------------IAGLAL 153
+G A ++F+ M + V+ WTTM I+G A
Sbjct: 242 LMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYAR 301
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+G+G +AL++F++M V+P++ TF + L AC + ++ G++ + R +P
Sbjct: 302 NGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLL-RINFQPNTI 360
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ID+ + G L K+ M + + +W ++++A +G GE A+Q L
Sbjct: 361 VVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG---CGEEAIQML 414
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 47 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 106
I + ++ NEA++ + ++ D + + L CA A+ G+ +H +++ GL
Sbjct: 31 IVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGL 90
Query: 107 NTI-VPLNNALIDMYAKSGK-------------------------------IGKALQVFE 134
L+N LI+MYAK GK I A ++F+
Sbjct: 91 KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K V++W TM+ A G EAL +S + ++ N +F +L+ C + V L
Sbjct: 151 KMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGL 210
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
R+ + I+ + G + ++D + G + +A KL M + W ++++
Sbjct: 211 TRQVHGQILVA--GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSAR-DVLAWTTMVSG 267
Query: 254 SNIYGDVE 261
+GD++
Sbjct: 268 YAKWGDMK 275
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 219/340 (64%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YA+ G ++ A+ F+ M K+ +SW LI+G+A+ + A+ L +MQ +N +
Sbjct: 228 SALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + LSACA +GA+E G+W+H ++ + GL I + N L+DMYAK+G I A +V
Sbjct: 288 PTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRV 347
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + V++W TM+ G A HGLG+E LD F +M R ++PNEI+F+ +L+AC H GL+
Sbjct: 348 FDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLL 407
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF +MK +Y +EP + Y +DLLGR G L AE+ +R MP E AA+WG+LL
Sbjct: 408 DEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG 466
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++ELG A + +L+PH+SG +LSNIYA GRW + K+RK+M++ GVKK
Sbjct: 467 ACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQ 526
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++E+ VH FVA D +HP + +I+G++K
Sbjct: 527 PACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIK 566
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 141/247 (57%), Gaps = 4/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G L++AR +F+ M K++++WT LIAG++Q ++P +A+ LF +M +
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L A ++ G +H + +YG + V + +AL+DMYA+ G + A
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M KS ++W +I+G A G G AL + +M+R +P T+ ++LSAC +G +
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + +++KS G++ ++D+ +AG + +A+++ R+ + + W ++L
Sbjct: 307 EQGKWVHAHMIKS--GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTML 363
Query: 252 AASNIYG 258
+G
Sbjct: 364 TGCAQHG 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 6/213 (2%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSG 124
+Q ++ PD L C +LG VE G +H + ++ + L+ + L N +++MYAK G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ A ++F+ M K ++TWT +IAG + + R+AL +F +M R +PN T ++L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
A ++ G + + +YG + + ++D+ R G++ A+ MP ++
Sbjct: 198 ASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHN 277
+ W +L++ G+ GE AL L K++ N
Sbjct: 257 S-WNALISGHARKGE---GEHALHLLWKMQRKN 285
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 236/358 (65%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ G L +AR +FE M ++ ++W+ +I GY + ++A+ LFR MQV
Sbjct: 175 NTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSG 234
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDE+ ++ L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+
Sbjct: 235 VRPDEVTVIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAV 294
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ ++V++WT++I LA+ G G+EA+ +F M+ V P+++ FI +L+AC H G
Sbjct: 295 AVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAG 354
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ GR YF+ MK+ YGIEPKIE YGCM+D+ GRAG +++ + +R MP + N IW +L
Sbjct: 355 MVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTL 414
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+AA +G +ELGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+K
Sbjct: 415 VAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIK 474
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PGCS +E+ VHEF+AGD SHP + +Y+++ +++ +++ H+ +L+ D
Sbjct: 475 KVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATSEVLLDLD 532
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 13/101 (12%)
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHV-GLVELGRR------YFNIMKSRYGIEP 210
R A F M RA V PN+ TF +L +C + G ++G + F Y
Sbjct: 117 RRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYVSNT 176
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
I Y C AG+L +A + RMP E +A W +++
Sbjct: 177 LIHMYSCF-----GAGFLGDARNVFERMPRE-SAVTWSAMI 211
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 218/335 (65%), Gaps = 6/335 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V Y K G + AR +F+ M EK+++ W+ +I GYA P EAI LF M+ NV+
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVR 303
Query: 73 PDEIAMLAALSACAQLGAVELGEW---IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
PD AM+ ALS+CA LGA+ELG W + NY E++ N + L +LID YAK G + +A
Sbjct: 304 PDCYAMVGALSSCASLGALELGNWAKGLMNY-EEFLSNPV--LGTSLIDFYAKCGSMEEA 360
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L V++ MK K + + +I+GLA++G A +F +M + + PNE TF+ +L C H
Sbjct: 361 LGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHA 420
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ GR YFN M + + P IE YGCM+DLL RAG+L EA L++ MP +AN +WGS
Sbjct: 421 GLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGS 480
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL ++ + +L E L+ LI+LEP NSG+Y +LSNIY+ RW+E+ KIR + + G+
Sbjct: 481 LLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGM 540
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+K+PG S++EV VHEF+ GDTSHP ++Y+ L
Sbjct: 541 QKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKL 575
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 136/248 (54%), Gaps = 2/248 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y+K G L +A +F+ M KNV+SWT +I G + + EA+ LFR + ++
Sbjct: 143 TNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLR 202
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ L ACA+LG +E G WI + + GL+ V + +L+DMY K G + +A V
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFV 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K ++ W+ MI G A +GL REA+++F M + V+P+ + LS+C +G +
Sbjct: 263 FDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGAL 322
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELG +M + + +ID + G ++EA + + M E + ++ ++++
Sbjct: 323 ELGNWAKGLMNYEEFLSNPVLGTS-LIDFYAKCGSMEEALGVYKMMK-EKDRVVFNAVIS 380
Query: 253 ASNIYGDV 260
+YG V
Sbjct: 381 GLAMYGQV 388
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 95
T N + T+I G D+ N A+ L+ M + PD L ACA+L LG
Sbjct: 65 TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124
Query: 96 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
IH+ + + G + V + ++ Y+K G + A +VF++M K+V++WT MI G G
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
REA+D+F + + ++P+ + +L AC +G +E GR M+ G+ +
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMR-ECGLSRNVFVA 243
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASN 255
++D+ + G ++EA + M E + W +++ ASN
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQGYASN 284
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 214/323 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++ G+ + GDL+ AR LF M EKNV+SWTT+I G++Q +A+++F RM E V
Sbjct: 242 WNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGV 301
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+++ +++AL AC ++GA+++GE IHNY+ G + AL+DMYAK G I A +
Sbjct: 302 RPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASR 361
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF K K ++TW+ MI G A+HG +AL F +M+ A + P+E+ F+AIL+AC H G
Sbjct: 362 VFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGN 421
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +F M+ Y IEP ++ Y ++DLLGRAG L EA ++ MP + IWG+L
Sbjct: 422 VDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALF 481
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + ++E+ E + L++LEP + G+Y LSN+YA +GRW + ++R +M++ GV+K
Sbjct: 482 CACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEK 541
Query: 312 MPGCSYIEVSKRVHEFVAGDTSH 334
PG SYIEV +VH FVAGD +H
Sbjct: 542 DPGWSYIEVEGQVHSFVAGDHAH 564
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 49/265 (18%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+F+ SR++ + +++ + L+ A ++F N+ + LI G A+ + ++
Sbjct: 68 LFSNSRVVTQ----LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSV 123
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+ F M +++PD + + L + A L V LG +H + + GL + +L+DMY
Sbjct: 124 SHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMY 183
Query: 121 AKSGKIGKALQVFENM----KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
K G++G LQ+F+ K +S++ W +I G
Sbjct: 184 VKIGELGFGLQLFDESPQRNKAESILLWNVLING-------------------------- 217
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
CC VG + F M R + +I+ R G L A +L
Sbjct: 218 ---------CCKVGDLSKAASLFEAMPER-----NAGSWNSLINGFVRNGDLDRARELFV 263
Query: 237 RMPFEANAAIWGSLLAASNIYGDVE 261
+MP E N W +++ + GD E
Sbjct: 264 QMP-EKNVVSWTTMINGFSQNGDHE 287
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 55/301 (18%)
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
I ++ A + QL + ++HN + T LI + AL +F
Sbjct: 44 IPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVT------QLISSSCSLKSLDYALSIFRC 97
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA---------- 185
+ ++ + +I GLA + ++ F M R ++P+ +T +L +
Sbjct: 98 FDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLG 157
Query: 186 -CCHVGLVELGRR------------YFNIMKSRYGIE-----PK------IEQYGCMIDL 221
C H G+++LG Y I + +G++ P+ I + +I+
Sbjct: 158 RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING 217
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 281
+ G L +A L MP E NA W SL+ GD++ A + +++ N ++
Sbjct: 218 CCKVGDLSKAASLFEAMP-ERNAGSWNSLINGFVRNGDLDR---ARELFVQMPEKNVVSW 273
Query: 282 AILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSYI---EVSKRVHEFVAG 330
+ N ++ G ++ + M + GV+ + C+ I +V +R+H +++
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSS 333
Query: 331 D 331
+
Sbjct: 334 N 334
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 225/356 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y+ G + +AR +F+ M +++++++ +I GYA + EA+ LF R+Q E +K
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 527
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + L+ACA G++E IH + + G + + NAL+ YAK G A V
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIV 587
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M ++VI+W +I G A HG G++AL +F RM+ VKP+ +TF+++LSAC H GL+
Sbjct: 588 FEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLL 647
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRRYF M + I P IE YGCM+DLLGRAG L EAE L++ MPF+AN IWG+LL
Sbjct: 648 EEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLG 707
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+V + E A + +KL+ N+ Y LS++YA G W+ + K+RK+M GV K
Sbjct: 708 ACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 767
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S+I+V ++H FVA D SHP +++Y L ++ MK ++ + S + + D
Sbjct: 768 PGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVD 823
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 142/256 (55%), Gaps = 5/256 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y++ G + +AR +F+ M K+VISWT +I G A+ EA+T+++ MQ V+
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L+AC+ A+E G IH + + GL T + N L++MY+ G + A QV
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++ + MI G A H LG+EAL +F R++ +KP+++T+I +L+AC + G +
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E R +++ + G ++ + G +A + +M + N W +++
Sbjct: 547 EWAREIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIG 604
Query: 253 ASNIYGDVELGECALQ 268
S +G G+ ALQ
Sbjct: 605 GSAQHGR---GQDALQ 617
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 126/226 (55%), Gaps = 1/226 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G + R +FE + +++I+W T+I G A+ EA ++ +MQ E V
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I + L+AC A+ G+ IH+ + + G + + + NALI MY++ G I A V
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K VI+WT MI GLA G G EAL ++ M++A V+PN +T+ +IL+AC +
Sbjct: 386 FDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAAL 445
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
E GRR + G+ ++++ G +++A ++ RM
Sbjct: 446 EWGRRIHQQV-VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N ++ YAK G + AR +F+ M +K+V+SWT I GYA + A +F++M+ E
Sbjct: 162 KVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQE 221
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V P+ I ++ L+A + A++ G+ +H+ I G + + AL+ MYAK G
Sbjct: 222 GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDC 281
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVFE + N+ +I W TMI GLA G EA +++++M+R V PN+IT++ +L+AC +
Sbjct: 282 RQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNS 341
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ G+ + + ++ G I +I + R G +++A + +M
Sbjct: 342 AALHWGKEIHSRV-AKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM 389
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 103/175 (58%), Gaps = 2/175 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++ Y + G + AR +++ ++ E+ V SW ++ GY Q +A+ L R+MQ
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD +++ LS+C GA+E G IH Q GL V + N +++MYAK G I +A
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+VF+ M+ KSV++WT I G A G A ++F +ME+ V PN IT+I++L+A
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNA 236
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 214/341 (62%), Gaps = 1/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+GY GD+ NA+ +F+LM EKNV +W +I GY Q + ++A+ LFR MQ +V
Sbjct: 256 WTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASV 315
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+ ++ L A A LGA++LG WIH + + L+ + ALIDMYAK G+I KA
Sbjct: 316 EPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKL 375
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M + +W +I G A++G +EAL++F+RM PNE+T I +LSAC H GL
Sbjct: 376 AFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGL 435
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GRR+FN M+ R+GI P++E YGCM+DLLGRAG L EAE L++ MP++AN I S L
Sbjct: 436 VEEGRRWFNAME-RFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFL 494
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + DV E L+ ++K++ +GNY +L N+YA RW + ++++M+ G K
Sbjct: 495 FACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSK 554
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IE+ EF AGD H + + L +++ MK
Sbjct: 555 EVACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLGQLSKHMK 595
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 18/250 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y K G L +AR +F+ M+ ++ +SWT +I GYA+ +EA LF M+ ++
Sbjct: 164 TALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDI- 222
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+A A + ++G V L + N + + + + +++ Y +G + A +
Sbjct: 223 ---VAFNAMIDGYVKMGCVGLARELFNEMRERNVVSW----TSMVSGYCGNGDVENAKLM 275
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+V TW MI G + +AL++F M+ A V+PNE+T + +L A +G +
Sbjct: 276 FDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGAL 335
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG----CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+LGR R+ + K+++ +ID+ + G + +A+ M E A W
Sbjct: 336 DLGRWI-----HRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMT-ERETASWN 389
Query: 249 SLLAASNIYG 258
+L+ + G
Sbjct: 390 ALINGFAVNG 399
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 24/289 (8%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR--RMQVENVKPDEIAMLAAL 82
+N+AR F ++ ++IA + Q ++ TLFR R Q PD A +
Sbjct: 73 INHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALV 132
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
CA A G +H + + G+ + + AL+DMY K G +G A +VF+ M +S +
Sbjct: 133 KGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKV 192
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+WT +I G A G EA +F ME + + F A++ +G V L R FN M
Sbjct: 193 SWTAVIVGYARCGDMSEARRLFDEMEDRDI----VAFNAMIDGYVKMGCVGLARELFNEM 248
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
+ R + + M+ G ++ A+ + MP E N W +++ Y
Sbjct: 249 RER-----NVVSWTSMVSGYCGNGDVENAKLMFDLMP-EKNVFTWNAMIGG---YCQNRR 299
Query: 263 GECALQ-----HLIKLEPHNSGNYAILSNIYAI----LGRWNESGKIRK 302
AL+ +EP+ +L + + LGRW +RK
Sbjct: 300 SHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRK 348
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 218/348 (62%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y K G ++A+ +F+ M +NV++WT LIAGY Q + + +F M +V
Sbjct: 244 SSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVA 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + LSACA +GA+ G +H Y+ + + + LID YAK G + +A+ V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ K+V TWT MI G A HG A+D+F M + V PNE+TFI +LSAC H GLV
Sbjct: 364 FERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR F MK R+ +EPK + Y CM+DL GR G L+EA+ L+ RMP E A+WG+L
Sbjct: 424 EEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFG 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ I+ D ELG+ A +IKL+P +SG Y +L+N+Y+ W++ ++RK M+D V K
Sbjct: 484 SCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKS 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKINGQMKFAEHLQN 359
PGCS+IEV ++HEF+A D P + D LY+ L + QM+ + L++
Sbjct: 544 PGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTLDNVGVQMRLPDELED 591
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++GY+ G +F+ +K+V+SWT +I G+ + D EA+T F M+ V
Sbjct: 142 NSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVA 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E+ +++ L A + V G IH Y+E + V + ++L+DMY K G A +
Sbjct: 202 ANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++V+TWT +IAG + + +F M ++ V PNE T ++LSAC HVG
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ GRR + ++K+ IE +ID + G L+EA + R+ E N W ++
Sbjct: 322 LHRGRRVHCYVIKN--SIEINTTVGTTLIDFYAKCGCLEEAILVFERLR-EKNVYTWTAM 378
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGN 280
+ +G +G L H + L H S N
Sbjct: 379 INGFAAHG-YAIGAVDLFHTM-LSSHVSPN 406
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL--FRRMQVENVKPDEIAMLAALSAC 85
AR L + ++ W +L+ ++ N ++ +R+M+ V P L A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+L ++ H +I ++G ++ + + N+LI Y+ G +VF+ ++K V++WT
Sbjct: 115 FKLRDANPFQF-HAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
MI G + EA+ F M+R+ V NE+T +++L A V GR
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + ++D+ G+ G +A+K+ MP N W +L+A
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMP-SRNVVTWTALIAG 280
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 218/344 (63%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+++ Y K G+L A +F M EK+++SW+T+I GYA P +A+ LF +MQ EN+KP
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D M+ LSACA LGA++LG W + +++ + L ALIDMY+K G + +A ++F
Sbjct: 315 DCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIF 374
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
MK K + W M+ GL+++G + +FS +E+ ++P+E TFI +L C H G V
Sbjct: 375 TAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVN 434
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR++FN MK + + P IE YGCM+DLLGRAG L EA +L+ MP + NA +WG+LL
Sbjct: 435 EGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
++ D L E L+ LI+LEP NSGNY LSNIY+ RW E+ KIR M++ ++K+
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIR 554
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
CS+IE+ VHEF+ GD SH +++Y L ++ ++K H+
Sbjct: 555 ACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 143/246 (58%), Gaps = 4/246 (1%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++++ Y K + ++A +F+ + +KNV+SWT +I GY EAI F+++ +KP
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D +++ L+ACA+LG GEWI YI G+ V + +L+DMY K G + +A +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
M K +++W+TMI G A +GL ++ALD+F +M+ +KP+ T + +LSAC +G ++
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333
Query: 194 LGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG ++M ++ + P + +ID+ + G + +A ++ M + + +W +++
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGT--ALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMV 390
Query: 253 ASNIYG 258
++ G
Sbjct: 391 GLSMNG 396
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 5/265 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ G N ++ +F + E N+ W T+I G D ++AI L+ M+
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L ACA+ V LG IH+ + + G + V + +L+ +Y K AL+V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+++ +K+V++WT +I G G REA+ F ++ +KP+ + + +L+AC +G
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + + S G+ + ++D+ + G L+ A + MP E + W +++
Sbjct: 232 TSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQ 289
Query: 253 ASNIYGDVELGECALQHLIKLEPHN 277
G L + AL +++ N
Sbjct: 290 GYAFNG---LPQQALDLFFQMQSEN 311
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 218/345 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y K G+L A +F M EK+++SW+T+I GYA P +A+ LF +MQ EN+K
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLK 313
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M+ LSACA LGA++LG W + +++ + L ALIDMY+K G + +A ++
Sbjct: 314 PDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEI 373
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK K + W M+ GL+++G + +FS +E+ ++P+E TFI +L C H G V
Sbjct: 374 FTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFV 433
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR++FN MK + + P IE YGCM+DLLGRAG L EA +L+ MP + NA +WG+LL
Sbjct: 434 NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLG 493
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++ D L E L+ LI+LEP NSGNY LSNIY+ RW E+ KIR M++ ++K+
Sbjct: 494 GCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKI 553
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
CS+IE+ VHEF+ GD SH +++Y L ++ ++K H+
Sbjct: 554 RACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 142/247 (57%), Gaps = 4/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y K + ++A +F+ + +KNV+SWT +I GY EAI F+++ +K
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ L+ACA+LG GEWI YI G+ V + +L+DMY K G + +A +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K +++W+TMI G A +GL ++ALD+F +M+ +KP+ T + +LSAC +G +
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 193 ELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG ++M ++ + P + +ID+ + G + +A ++ M + +W +++
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGT--ALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMM 389
Query: 252 AASNIYG 258
++ G
Sbjct: 390 VGLSMNG 396
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 5/265 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ G N ++ +F + E N+ W T+I G D ++AI L+ M+
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L ACA+ V LG IH+ + + G + V + +L+ +Y K AL+V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+++ +K+V++WT +I G G REA+ F ++ +KP+ + + +L+AC +G
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + + S G+ + ++D+ + G L+ A + MP E + W +++
Sbjct: 232 TSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQ 289
Query: 253 ASNIYGDVELGECALQHLIKLEPHN 277
G L + AL +++ N
Sbjct: 290 GYAFNG---LPQQALDLFFQMQSEN 311
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 228/361 (63%), Gaps = 9/361 (2%)
Query: 2 FTLSRLLYKF--------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F +RL++ + WNTM+ GY + G ++NA +F+ M E+++ISWT +I G+ +
Sbjct: 125 FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKK 184
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
EA+ FR MQ+ VKPD +A++AAL+AC LGA+ G W+H Y+ V ++
Sbjct: 185 GYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS 244
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N+LID+Y + G + A QVF NM+ ++V++W ++I G A +G E+L F +M+ K
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+ +TF L+AC HVGLVE G RYF IMK Y I P+IE YGC++DL RAG L++A K
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
L++ MP + N + GSLLAA + +G ++ L E ++HL L + NY ILSN+YA G
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADG 424
Query: 293 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+W + K+R+ M+ +G+KK PG S IE+ +H F+AGD +H + + ++L I+ ++
Sbjct: 425 KWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Query: 353 F 353
Sbjct: 485 L 485
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 36/250 (14%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + +SWT+ I + + EA F M + V+P+ I +A LS C G+ L
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--- 149
G+ +H Y + GL+ V + A+I MY+K G+ KA VF+ M++K+ +TW TMI
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 150 ----------------------------GLALHGLGREALDMFSRMERARVKPNEITFIA 181
G G EAL F M+ + VKP+ + IA
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
L+AC ++G + G + S+ + + +IDL R G ++ A ++ M +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-K 269
Query: 242 ANAAIWGSLL 251
W S++
Sbjct: 270 RTVVSWNSVI 279
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 34/155 (21%)
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 186
+Q +++ ++WT+ I L +G EA FS M A V+PN ITFIA+LS C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 187 ---------------CHVGL----VELGRRYFNIMKSR-----------YGIEPKIEQYG 216
C +GL V +G + R Y + +
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
MID R+G + A K+ +MP E + W +++
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMI 178
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 221/342 (64%), Gaps = 4/342 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MVAG+ + GD+ +AR +FE M E++++SW +I+G P EA+ LFR M E
Sbjct: 111 WTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGF 170
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +++ LSAC GA+E G+W+H ++E+ L L AL+DMYAK G + AL+
Sbjct: 171 VPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALE 230
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
VF ++ ++ TW MI GLA++G +ALDMF +ME V P+E+TF+ +L AC H G
Sbjct: 231 VFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAG 290
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ G+ +F + +YG+E +E Y CM+DLL R+G+LQEA KL+ MP + + +W +L
Sbjct: 291 FVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRAL 350
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L ++ +V++ E + ++E SG++ +LSN+YA +GRWN +R+ MR G++
Sbjct: 351 LGGCRLHKNVKMAENVIS---EMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIE 407
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K+PGCS +E+ +HEF++GD SHP +D ++ L +I G+M+
Sbjct: 408 KIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQ 449
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + GY G + +AR +F+ M ++ +S+ ++I GYA A LF R+ +
Sbjct: 50 NAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERV----LA 105
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + W +++ + ++G + A +V
Sbjct: 106 PTPVT------------------W-----------------TSMVAGFCRAGDVESARRV 130
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M + +++W MI+G + L EAL +F M PN T +++LSAC G +
Sbjct: 131 FEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGAL 190
Query: 193 ELGR 196
E G+
Sbjct: 191 ETGK 194
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + G NNA I Y +G++ A +VF+ M + +++ +MI G A+ G
Sbjct: 33 LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A +F R+ + P +T+ ++++ C G VE RR F M R + G
Sbjct: 93 VGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISG 148
Query: 217 CMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGE 264
C+ + L EA L R M F N S+L+A G +E G+
Sbjct: 149 CVGNRLP-----VEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGK 194
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 217/348 (62%), Gaps = 2/348 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V Y++ D+ +A +F K++++WT ++ GYAQ P +A+ +F RM +
Sbjct: 215 WTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGI 274
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+++ A+SACAQLGAV+ W+ E G V + + L+DMYAK G I +A +
Sbjct: 275 GIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCGLIDEACK 334
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VF+ M+ K+V T+++M+ GLA HG REA+ +F M RA V PN +TFI +L+AC H G
Sbjct: 335 VFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTACSHAG 394
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V GR YF MK +YGI P + Y CM+DLLGRAG + EA L+R M E + +WG+L
Sbjct: 395 MVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGVWGAL 454
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G E+ + A +HL KLEP GNY +LSN A G+W+E K+RKVMR +K
Sbjct: 455 LGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMRSRRLK 514
Query: 311 KMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
K+P S+ E VH+F AGD SHP + + L ++ ++K A ++
Sbjct: 515 KVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGYV 562
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 33/178 (18%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT------------------------- 146
+ N+LI Y G +G A +VF+ M K VI WT+
Sbjct: 183 VENSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMGSAEEVFGQCPVKD 242
Query: 147 ------MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
M+ G A + + +AL++F RM + +E++ +SAC +G V+ +
Sbjct: 243 MVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQLGAVKRA-AWVQ 301
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + ++D+ + G + EA K+ M E N + S++ +G
Sbjct: 302 EIAEMNGFGMNVVVGSGLVDMYAKCGLIDEACKVFDGMQ-EKNVYTYSSMVVGLASHG 358
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 216/346 (62%), Gaps = 7/346 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+MV+GYA+ + AR +F MT++NV+SW LIAGY Q + EA+ LFR ++ E++
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIW 378
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIE------QYGLNTIVPLNNALIDMYAKSGKI 126
P LSACA L + LG H ++ Q G + + + N+LIDMY K G I
Sbjct: 379 PTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSI 438
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+VFE MK + ++W +I G A +G G EAL +F +M KP+ +T I +L AC
Sbjct: 439 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 498
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLVE GR YF M+ +G+ P + Y CM+DLLGRAG L EA+ L+ MP +A +
Sbjct: 499 SHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVV 557
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WGSLLAA ++G++E+G+ A + L++++P NSG Y +LSN+YA LGRW + ++RK+MR
Sbjct: 558 WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQ 617
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GV K PGCS+IEV RVH F+ D SHP ++Y +L + QMK
Sbjct: 618 QGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 663
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 126/227 (55%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ K G L+ A LF M E + SW ++++G+AQ D+ E++ F +M E+
Sbjct: 84 WNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDF 143
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E + +ALSACA L + +G +H + + +T V + +ALIDMY+K G + A +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++++TW ++I +G EAL++F RM + ++P+E+T +++SAC +
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++ G + + + ++D+ + + EA ++ RM
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 142/285 (49%), Gaps = 40/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+K G + A +F M E+N+++W +LI Y Q +EA+ +F RM ++
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 73 PDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A++ G IH ++ + L NAL+DMYAK K+ +A +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 132 VFENMK-------------------------------NKSVITWTTMIAGLALHGLGREA 160
VF+ M ++V++W +IAG +G EA
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRY----GIEPKIEQY 215
L +F ++R + P TF +LSAC ++ + LGR+ + +++K + G E I
Sbjct: 366 LRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVG 425
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+ID+ + G +++ ++ +M E + W +++ A N YG
Sbjct: 426 NSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNGYG 469
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ L +C + + +H I + + + N LID+Y K + A ++
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 133 FENMKNKSVIT-------------------------------WTTMIAGLALHGLGREAL 161
F+ M ++ T W +M++G A H E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMID 220
+ F +M R NE +F + LSAC + + +G + ++ KSRY + + +ID
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTD--VYMGSALID 190
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + G + AE++ M E N W SL+
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLITC 222
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 238/367 (64%), Gaps = 6/367 (1%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
++L + LY WN M+ GY G++ A+ +F+ M+E++V+SWTT+IAGY Q+ EA+
Sbjct: 177 WSLDQDLYS-WNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALD 235
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LF M P+E + +AL+ACA L A++ G WIH YI++ + L +L+DMYA
Sbjct: 236 LFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYA 295
Query: 122 KSGKIGKALQVFEN---MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
K G+I A +VF + +K K V W MI G A+HG +EA+D+F +M+ +V PN++T
Sbjct: 296 KCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVT 354
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F+A+L+AC H LVE GR YF M S YGIEP+IE YGCM+DLLGR+G L+EAE+ + M
Sbjct: 355 FVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNM 414
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P +A IWG+LL A I+ D+E G+ + + +L+ + G + +L+N+Y+ G+W+E+
Sbjct: 415 PMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAK 474
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+R+ + G KK PGCS IE++ H+F+ GD SHP +LY L ++ ++K A ++
Sbjct: 475 AVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVP 534
Query: 359 NEFSGVL 365
EF VL
Sbjct: 535 -EFGEVL 540
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 36/251 (14%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRM-QVENVKPDEIA 77
+ G L+ A LF+ + + +V + T+I +A + + ++ +F M +V P+
Sbjct: 60 SSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYT 119
Query: 78 MLAALSACAQ-LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK-------------- 122
+ AC LG +E GE I + + GL + + + NA+I MYA
Sbjct: 120 FVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWS 178
Query: 123 -----------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
SG+IG+A ++F+ M + V++WTT+IAG G +EALD+F
Sbjct: 179 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFH 238
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
M + PNE T + L+AC ++ ++ G R+ ++ + I+ ++D+ +
Sbjct: 239 EMLQTGPPPNEFTLASALAACANLVALDQG-RWIHVYIDKSEIKMNERLLASLLDMYAKC 297
Query: 226 GYLQEAEKLLR 236
G + A K+
Sbjct: 298 GEIDFAAKVFH 308
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 221/344 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NTM+ G + G + AR +F+ M + +SWT LI G + + +EAI F M + V
Sbjct: 140 YNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGV 199
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++AA+SACA++GA+ LG W+H ++ L V + N+LIDMYA+ G++ A Q
Sbjct: 200 EPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQ 259
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ ++V++W +MI G A +G +A++ F M R KP+ +TF +L+AC H GL
Sbjct: 260 VFGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGL 319
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G RY++ M++ +GI ++E YGC++DLLGRAG L EA +++ MP N + G+LL
Sbjct: 320 TDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALL 379
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV+L E +QHL++ +P NY +LSNIYA +G+W +GK+R +M+ GVKK
Sbjct: 380 AGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWGGAGKVRSLMKSRGVKK 439
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S +E+ VHEFV GD SHP ++++L + +M E
Sbjct: 440 RPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVLGLLTHEMAGCE 483
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 43/265 (16%)
Query: 35 MTEKNVISWTTLIAGYAQMD--QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 92
+ ++V+SWT+ IA A+ Q A P+++ +L LSACA +
Sbjct: 26 LPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACAGDSSSA 85
Query: 93 LGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
L + + + + P N L Y S A+++F++M ++SV+T+ TMI
Sbjct: 86 LARPLALSLHALAVK-LFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDRSVVTYNTMI 144
Query: 149 AGLALHGL-----------------------------GR--EALDMFSRMERARVKPNEI 177
GL +GL GR EA+D F M R V+P+ +
Sbjct: 145 TGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYV 204
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
T +A +SAC VG + LG + + +E + +ID+ R G + A ++ R
Sbjct: 205 TLVAAISACAEVGALGLGMWVHRFVVDKR-LEHNVRVANSLIDMYARCGQVDFARQVFGR 263
Query: 238 MPFEANAAIWGSLL---AASNIYGD 259
+ + W S++ AA+ Y D
Sbjct: 264 I-RKRTVVSWNSMIVGFAANGQYAD 287
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 218/340 (64%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YA+ G ++ A+ F+ M K+ +SW LI+G+A+ + A+ L +MQ +N +
Sbjct: 228 SALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + SACA +GA+E G+W+H ++ + GL I + N L+DMYAK+G I A +V
Sbjct: 288 PTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRV 347
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + V++W TM+ G A HGLG+E LD F +M R ++PNEI+F+ +L+AC H GL+
Sbjct: 348 FDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLL 407
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF +MK +Y +EP + Y +DLLGR G L AE+ +R MP E AA+WG+LL
Sbjct: 408 DEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG 466
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++ELG A + +L+PH+SG +LSNIYA GRW + K+RK+M++ GVKK
Sbjct: 467 ACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQ 526
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++E+ VH FVA D +HP + +I+G++K
Sbjct: 527 PACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIK 566
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 141/247 (57%), Gaps = 4/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G L++AR +F+ M K++++WT LIAG++Q ++P +A+ LF +M ++
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L A ++ G +H + +YG + V + +AL+DMYA+ G + A
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M KS ++W +I+G A G G AL + +M+R +P T+ ++ SAC +G +
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGAL 306
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + +++KS G++ ++D+ +AG + +A+++ R+ + + W ++L
Sbjct: 307 EQGKWVHAHMIKS--GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTML 363
Query: 252 AASNIYG 258
+G
Sbjct: 364 TGCAQHG 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 15/250 (6%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSG 124
+Q ++ PD L C +LG VE G +H + ++ + L+ + L N +++MYAK G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ A ++F+ M K ++TWT +IAG + + R+AL +F +M R ++PN T ++L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
A ++ G + + +YG + + ++D+ R G++ A+ MP ++
Sbjct: 198 ASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHN--------SGNYAILSNIYAI-LGRWN 295
+ W +L++ G+ GE AL L K++ N S ++ ++I A+ G+W
Sbjct: 257 S-WNALISGHARKGE---GEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 296 ESGKIRKVMR 305
+ I+ ++
Sbjct: 313 HAHMIKSGLK 322
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 238/367 (64%), Gaps = 6/367 (1%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
++L + LY WN M+ GY G++ A+ +F+ M+E++V+SWTT+IAGY Q+ EA+
Sbjct: 92 WSLDQDLYS-WNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALD 150
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LF M P+E + +AL+ACA L A++ G WIH YI++ + L +L+DMYA
Sbjct: 151 LFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYA 210
Query: 122 KSGKIGKALQVFEN---MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
K G+I A +VF + +K K V W MI G A+HG +EA+D+F +M+ +V PN++T
Sbjct: 211 KCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVT 269
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F+A+L+AC H LVE GR YF M S YGIEP+IE YGCM+DLLGR+G L+EAE+ + M
Sbjct: 270 FVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNM 329
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P +A IWG+LL A I+ D+E G+ + + +L+ + G + +L+N+Y+ G+W+E+
Sbjct: 330 PMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAK 389
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+R+ + G KK PGCS IE++ H+F+ GD SHP +LY L ++ ++K A ++
Sbjct: 390 AVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVP 449
Query: 359 NEFSGVL 365
EF VL
Sbjct: 450 -EFGEVL 455
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 66 MQVENVKPDEIAMLAALSACAQ-LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK-- 122
++V P+ + AC LG +E GE I + + GL + + + NA+I MYA
Sbjct: 23 VRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAMIRMYANWG 81
Query: 123 -----------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
SG+IG+A ++F+ M + V++WTT+IAG
Sbjct: 82 LVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQ 141
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
G +EALD+F M + PNE T + L+AC ++ ++ G R+ ++ + I+
Sbjct: 142 VGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG-RWIHVYIDKSEIKMNER 200
Query: 214 QYGCMIDLLGRAGYLQEAEKLLR 236
++D+ + G + A K+
Sbjct: 201 LLASLLDMYAKCGEIDFAAKVFH 223
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/325 (45%), Positives = 216/325 (66%), Gaps = 1/325 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T++A YA + AR +F+ M E++VIS++ +IA Y + ++ EA+ LFR + +
Sbjct: 157 WTTLLACYANSCSVKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKI 216
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKAL 130
+P + +++ L ACA LGA+++G W+++Y+ Q + + + ALIDM+ K G I AL
Sbjct: 217 EPSDSCVMSVLCACANLGALDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHAL 276
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE K K V WT M++GLA+HGLG + ++ F +M + VKPN +TF+A+LS C H G
Sbjct: 277 LVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSG 336
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV G YF+ M+S +G+EP +E +GC++DLLGRAG + +A +L+ MPFE NAAIWGSL
Sbjct: 337 LVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSL 396
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +Y +VE+GE A Q LIK EP N Y L ++Y GRW+E K++ M+++G +
Sbjct: 397 LNACRVYKNVEIGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCR 456
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PGCS IEV +EFV GD SHP
Sbjct: 457 KGPGCSLIEVGGICYEFVVGDKSHP 481
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L++AR LF+ + + + T+ YA P A+ L R M PD L A
Sbjct: 38 LHHARLLFDAIHHPSTYLYNTMFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKA 97
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C+ L + G+ +H ++GL V + N+LI +Y + + A +VF+ M + + +W
Sbjct: 98 CSALAHLPKGQELHCQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASW 157
Query: 145 TT-------------------------------MIAGLALHGLGREALDMFSRMERARVK 173
TT MIA REALD+F + +++
Sbjct: 158 TTLLACYANSCSVKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIE 217
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--IEPKIEQYGCMIDLLGRAGYLQEA 231
P++ +++L AC ++G +++GR ++ + G ++ +I +ID+ + G ++ A
Sbjct: 218 PSDSCVMSVLCACANLGALDVGRWVYSYVCQSKGDYVDSRIAT--ALIDMFFKCGSIEHA 275
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
L+ E + W ++L+ ++G LGE
Sbjct: 276 -LLVFEGAKEKHVGEWTAMLSGLAMHG---LGE 304
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 219/343 (63%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA +F+ M E+++ISWT +I G+ EA+ FR MQ+ V
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGV 202
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A++AAL+AC LGA+ G W+H Y+ V ++N+LID+Y + G + A Q
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ R KP+ +TF L+AC HVGL
Sbjct: 263 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGL 322
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYF IM S Y I P+IE YGC++DL RAG L++A KL++ MP + N + GSLL
Sbjct: 323 VEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G + L E ++HL L + NY ILSN+YA G+W + K+R+ M+ +G+K
Sbjct: 383 AACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PG S IE+ H F+AGD++H + + ++L I+ ++
Sbjct: 443 KQPGFSSIEIDDCTHVFMAGDSAHVETTNICEVLKLISSNLRL 485
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 42/253 (16%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T +N +SWT+ I + + EA F M++ V+P+ I +A LS C G+ L
Sbjct: 32 TSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEAL 91
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--- 149
G+ +H Y + GL+ V + A+I MY+K G++ KA VF+ M++K+ +TW TMI
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYM 151
Query: 150 ----------------------------GLALHGLGREALDMFSRMERARVKPNEITFIA 181
G G EAL F M+ + VKP+ + IA
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIA 211
Query: 182 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC ++G + G RY +M + ++ +IDL R G ++ A ++ +M
Sbjct: 212 ALNACTNLGALSFGLWVHRY--VMSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFDKM 267
Query: 239 PFEANAAIWGSLL 251
+ W S++
Sbjct: 268 E-KRTVVSWNSVI 279
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 44/160 (27%)
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 186
+Q +++ ++WT+ I L +G EA FS M A V+PN ITFIAILS C
Sbjct: 25 IQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDF 84
Query: 187 ---------------CHVGL--------------------VELGRRYFNIMKSRYGIEPK 211
C +GL V+ R F+ M+ + +
Sbjct: 85 PSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSV--- 141
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ MID R+G + A K+ +MP E + W +++
Sbjct: 142 --TWNTMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMI 178
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 216/329 (65%), Gaps = 3/329 (0%)
Query: 12 WNTMVAGYAKVGDLNNA-RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN +++ YA+ G + A R +F KNV+SW +I GY+ + +E + LF MQ
Sbjct: 177 WNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAG 236
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKPD +++ LSACA +GA+ GEW+H YI++ G++ + AL+DMY+K G I KAL
Sbjct: 237 VKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKAL 296
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF + K + TW ++I+GL+ HG G+ AL +FS M KPNE+TF+ +LSAC G
Sbjct: 297 EVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAG 356
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ GR FN+M +GI+P IE YGCM+DLLGR G L+EAE+L+++MP + + +W SL
Sbjct: 357 LLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESL 416
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +G+VEL E Q L++L P S ++ LSN+YA +GRW + ++R+ MR GV+
Sbjct: 417 LGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVR 476
Query: 311 KMPGCSYIEVSKRVHEFVAGD--TSHPDF 337
K PGCS IEV V+EF+AG+ S DF
Sbjct: 477 KDPGCSMIEVDGTVYEFLAGEGLVSGKDF 505
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F + N W T+I YA P A+T+F +M +V PD+ AL +C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
VE G IH ++ + GL + + N LI +YA G I A + + M + V++W +
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 148 IAGLALHGL------------------------------GR--EALDMFSRMERARVKPN 175
++ A GL GR E L +F M+ A VKP+
Sbjct: 181 LSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 240
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
T +++LSAC HVG + G + + + GI ++D+ + G +++A ++
Sbjct: 241 NCTLVSVLSACAHVGALSQG-EWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVF 299
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
+ + W S+++ + +G G+ ALQ
Sbjct: 300 NSC-LRKDISTWNSIISGLSTHGS---GQHALQ 328
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 224/339 (66%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA+ ++ AR +F+ M E KN+++W+++I GY++M NEA+ LFR MQ V PDE+
Sbjct: 172 YARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVT 231
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SACA+ GA++LG+W+H +I++ G+ + L+ ALIDMYAK G I +A VF++M
Sbjct: 232 MVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMV 291
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ W+ MI GLA+HGL +AL +FSRM + +V+PN +TF+ +LSAC H GLV+ GRR
Sbjct: 292 ERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRR 351
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y+ M+ GIE +E YGCM+DLL R+G L EA + MP N+ IW +LL AS
Sbjct: 352 YWCTMQE-LGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSS 410
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+++ E A + L +LEP N NY +LSN+YA+ +W+ +RK M+D V + GCS
Sbjct: 411 NRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSS 470
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +H+FV D SHP+ ++ +L +I ++ A H
Sbjct: 471 IEINGYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGH 509
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQ-----PNEAITLFRRM-QVENVKPDEIAMLAA 81
ARALF+ + E + +LI + + L+RRM + P+ +
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFV 136
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKS 140
L AC LG G+ +H +GL + L+++YA+ ++ A VF+ M ++K+
Sbjct: 137 LKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKN 193
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++ W++MI G + G+ EAL +F M+ V P+E+T ++++SAC G ++LG ++ +
Sbjct: 194 LVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLG-KWVH 252
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
R GI +E +ID+ + G ++ A+ + M E + W +++ ++G
Sbjct: 253 AFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSM-VERDTKAWSAMIVGLAMHGLA 311
Query: 261 E--LGECALQHLIKLEPHNSGNYAILS 285
E LG + +K+ P+N +LS
Sbjct: 312 EDALGLFSRMLQLKVRPNNVTFVGVLS 338
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 223/328 (67%), Gaps = 4/328 (1%)
Query: 19 YAKVGDLNNARALFELMTE----KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
Y K G+L +AR +FE M E K+ + WT +I G+ + ++ N A+ FR MQ ENV+P+
Sbjct: 175 YGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPN 234
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E ++ LSAC+QLGA+E+G W+H+Y+ ++ + + + NALI+MY++ G I +A VF+
Sbjct: 235 EFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFD 294
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
MK++ VIT+ TMI+GL+++G R+A+++F M R++P +TF+ +L+AC H GLV+
Sbjct: 295 EMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDF 354
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G + F+ M YG+EP+IE YGCM+DLLGR G L+EA L+R M + + G+LL+A
Sbjct: 355 GFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSAC 414
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++ ++ELGE + L +SG Y +LS++YA G+W E+ ++R M++ G++K PG
Sbjct: 415 KMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPG 474
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
CS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 475 CSSIEVNNEIHEFLLGDLRHPRKERIYE 502
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 5/223 (2%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+K ++ A +F+ NV +T LI G+ +AI L+ RM +++ PD M
Sbjct: 75 SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMA 134
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN- 138
+ L AC A+ G +H+ + GL++ + ++++Y K G++G A +VFE M
Sbjct: 135 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 194
Query: 139 ---KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
K + WT MI G + AL+ F M+ V+PNE T + +LSAC +G +E+G
Sbjct: 195 VVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 254
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
R + M+ ++ IE + +I++ R G + EA+ + M
Sbjct: 255 RWVHSYMR-KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 296
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++ G ++ A+ +F+ M +++VI++ T+I+G + + +AI LFR M ++
Sbjct: 274 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLR 333
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + + L+AC+ G V+ G + H+ YG+ + ++D+ + G++ +A
Sbjct: 334 PTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYD 393
Query: 132 VFENMK-NKSVITWTTMIAGLALH 154
+ MK I T+++ +H
Sbjct: 394 LIRTMKMTPDHIMLGTLLSACKMH 417
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ +K I A ++F+ N +V +T +I G G +A+ ++SRM + P+
Sbjct: 70 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 129
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+IL AC + GR + + G+ +++L G+ G L +A ++
Sbjct: 130 NYLMASILKACGSQLALREGREVHS-RALKLGLSSNRLVRLRIMELYGKCGELGDARRVF 188
Query: 236 RRMPFEA---NAAIWGSLL 251
MP + + W +++
Sbjct: 189 EEMPEDVVAKDTVCWTAMI 207
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 220/336 (65%), Gaps = 3/336 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ YA+ GD+++A LF + K++++WT+++ GY+Q P +A+ FR+M+ V
Sbjct: 178 WTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGV 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIE--QYGLNTIVPLNNALIDMYAKSGKIGKA 129
DEI ++ A+SACAQLG +WI E ++G + V + +ALIDMY+K G + +A
Sbjct: 238 VTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEA 297
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ MK +V ++++MI G A+HG R A+ +F M +KPN +TF+ + +AC H
Sbjct: 298 YNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHA 357
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+VE G++ F MK YG+ P + Y CM DLLGRAG+L++A +L++ MP E N +WG+
Sbjct: 358 GMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGA 417
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS+I+G+ ++ E A + L +LEP N GNY +LS YA+ +W++ ++RK+MR+ +
Sbjct: 418 LLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQL 477
Query: 310 KKMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQIL 344
+K PGCS++E +HEF AGD HP+ + + + L
Sbjct: 478 RKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKAL 513
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
LF + N ++ LI YA+ + +I L+ M NV P A S L
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKN 124
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT------- 143
LG +H + +G + + N +I MY K G + A +VF+ M ++ V+T
Sbjct: 125 PSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184
Query: 144 ------------------------WTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
WT+M+ G + + + ++AL F +M A V +EIT
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 180 IAILSACCHVGLVELGRRYFNIMK-SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ +SAC +G+ I + SR+G + +ID+ + G ++EA + + M
Sbjct: 245 VGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGM 304
Query: 239 PFEANAAIWGSLLAASNIYG 258
E N + S++ ++G
Sbjct: 305 K-EMNVFSYSSMIVGFAVHG 323
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 221/339 (65%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YAK + AR +F+ M +K++++W+ +I GY+++ EA+ LFR MQ V+PDE+
Sbjct: 171 YAKCEQVALARTVFDGMAPDKSLVAWSAMINGYSRVGMVTEALGLFREMQAVGVEPDEVT 230
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M+ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF+ M
Sbjct: 231 MVGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMV 290
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLV+ GRR
Sbjct: 291 EKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVDDGRR 350
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y++IM++ GI+P +E YGCMIDLL R+G L +A + MP N+ IW +LL A
Sbjct: 351 YWSIMQN-LGIKPSMENYGCMIDLLCRSGLLDDAYSFVIDMPISPNSIIWRTLLVACKSS 409
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+++ E A + L++LEPHN NY +LSN+ A +W+ +RK M+D V + GCS
Sbjct: 410 NRIDIAESASKRLLELEPHNPENYVLLSNLCASNSQWDRVSYLRKKMKDSNVTAVAGCSS 469
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +HEFV D SHP+ + +L +I +++ A H
Sbjct: 470 IEINGYLHEFVVSDDSHPEIKEIRLVLREIADRVRRAGH 508
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 139/287 (48%), Gaps = 8/287 (2%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE--NVKPDEIAMLAALSACA 86
R LF+ + + + +LI R+ + + +P+ + AL ACA
Sbjct: 78 RTLFDQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACA 137
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWT 145
+ A G +H + GL + L+++YAK ++ A VF+ M +KS++ W+
Sbjct: 138 AVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVAWS 197
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
MI G + G+ EAL +F M+ V+P+E+T + ++SAC G ++LG ++ + R
Sbjct: 198 AMINGYSRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLG-KWVHAYIDR 256
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE--LG 263
GI +E +ID+ + G ++ A + M E + W +++ I+G VE LG
Sbjct: 257 KGITVDLELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIHGLVEDALG 315
Query: 264 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +K+ P+N +LS A G ++ + +M+++G+K
Sbjct: 316 LFSRMLELKVRPNNVTFIGVLSAC-AHSGLVDDGRRYWSIMQNLGIK 361
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 217/323 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYAKVG++ AR +F+ M +KNVISW+ +I GYA EA+ LFR+M + +
Sbjct: 242 WNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGI 301
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD ++++ A+SAC+QLGA++ G WIH Y+++ + + + AL+DMY K G +A
Sbjct: 302 KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARX 361
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +M ++V++W MI GL ++G G+EAL+ F +ME R+ +++ F+ +L AC H L
Sbjct: 362 IFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G FN MK Y +EPK+E YGC++DLLGRAG L + + +++ MP + NAA+WGSLL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V L E ++ L +L+ +SG Y ++SNIYA +G W +IRK+M++ +KK
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 312 MPGCSYIEVSKRVHEFVAGDTSH 334
G S IEV V EFV+G+ SH
Sbjct: 542 DIGRSVIEVDGNVEEFVSGEKSH 564
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 45/264 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA-QMDQPNEAITLFRRMQVEN 70
WN+M+ GY G++ NA+ +F+ M E++V+SW+ +I GY +M + N A F M
Sbjct: 179 WNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTR- 237
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+L W N++ID YAK G++ A
Sbjct: 238 ---------------------DLVSW-----------------NSMIDGYAKVGEMEVAR 259
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K+VI+W+ MI G A H +EAL++F +M +KP+ ++ + +SAC +G
Sbjct: 260 EIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLG 319
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ G R+ ++ R + I ++D+ + G EA + MP E N W +
Sbjct: 320 ALDQG-RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMP-ERNVVSWNVM 377
Query: 251 LAASNIYGDVELGECALQHLIKLE 274
+ + G G+ AL+ ++E
Sbjct: 378 IVGLGMNG---FGKEALECFXQME 398
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 18/259 (6%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SRLL +++V+ K ++N A +F + + N T++ Y + P A+
Sbjct: 44 FAASRLL----DSVVS---KTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALR 96
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ M+ + + D L AC + + G + + G V + N LI MY
Sbjct: 97 FYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYC 156
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFI 180
+ G+ G A VF+ K +++W +M+ G G A +MF M ER V + I
Sbjct: 157 RCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWS----I 212
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
I +G V R +F+ M +R + + MID + G ++ A ++ +M
Sbjct: 213 MIDGYGKKMGEVNRARVFFDSMPTR-----DLVSWNSMIDGYAKVGEMEVAREIFBKM-L 266
Query: 241 EANAAIWGSLLAASNIYGD 259
+ N W ++ + D
Sbjct: 267 QKNVISWSIMIDGYAXHRD 285
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 224/347 (64%), Gaps = 2/347 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKP 73
M+ YAK G++ ARALF+ M E++++SW +I GYAQ PN+A+ LF+++ E KP
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
DEI ++AALSAC+Q+GA+E G WIH +++ + V + LIDMY+K G + +A+ VF
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 192
+ K ++ W MIAG A+HG ++AL +F+ M+ ++P +ITFI L AC H GLV
Sbjct: 318 NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV 377
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G R F M YGI+PKIE YGC++ LLGRAG L+ A + ++ M +A++ +W S+L
Sbjct: 378 NEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++GD LG+ ++LI L NSG Y +LSNIYA +G + K+R +M++ G+ K
Sbjct: 438 SCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE 497
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IE+ +VHEF AGD H +Y +L KI+ ++K ++ N
Sbjct: 498 PGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA G + ++ ALF + ++ +T I + ++A L+ ++ + P+E
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L +C+ + G+ IH ++ ++GL + L+D+YAK G + A +VF+ M
Sbjct: 133 FSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 138 NKS-------------------------------VITWTTMIAGLALHGLGREALDMFSR 166
+S +++W MI G A HG +AL +F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 167 -MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+ + KP+EIT +A LSAC +G +E GR +KS I ++ +ID+ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDMYSKC 307
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G L+EA + P + W +++A ++G
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL K ++ Y+K G L A +F K++++W +IAGYA +A+ LF
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 66 MQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKS 123
MQ + ++P +I + L ACA G V G I + ++YG+ + L+ + ++
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA 410
Query: 124 GKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGRE 159
G++ +A + +NM + + W++++ LHG LG+E
Sbjct: 411 GQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
LN L YA GKI +L +F + + +T I +++GL +A ++ ++ +
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 172 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
+ PNE TF ++L +C + G+ + +++K GI+P + ++D+ + G +
Sbjct: 126 INPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVAT--GLVDVYAKGGDVVS 179
Query: 231 AEKLLRRMP 239
A+K+ RMP
Sbjct: 180 AQKVFDRMP 188
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 213/343 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W + ++ Y K GDL++A +F M +NV+SW +IAGYAQ + L M+ E
Sbjct: 433 WTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF 492
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + ++ L AC L +E G+ +H + GL + + +LI MY+K G++ +A
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M N+ + W M+AG HG G EA+D+F RM + RV PNEIT A++SAC GL
Sbjct: 553 VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGL 612
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR F +M+ + + P+ + YGCM+DLLGRAG LQEAE+ ++ MP E + ++W +LL
Sbjct: 613 VQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +V+L E A H+++LEP + Y LSNIYA GRW++S K+R+VM D G+KK
Sbjct: 673 GACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
G S IE+ R+H FVA D +HP+ D ++ L + +MK A
Sbjct: 733 DRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEA 775
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 141/251 (56%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+K D+ +A +F MT ++V++W+++IA YA + P +A F RM N++
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I L+ L AC +E G IH ++ G+ T V + ALI MY+K G+I A +V
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++V++WT +I A H EA +++ +M +A + PN +TF+++L++C +
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRR + + R G+E + +I + + +QEA ++ RM + + W +++A
Sbjct: 275 NRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMIA 332
Query: 253 --ASNIYGDVE 261
A + Y D E
Sbjct: 333 GYAQSGYKDKE 343
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 140/255 (54%), Gaps = 7/255 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y+K G+++ A +F MTE+NV+SWT +I AQ + NEA L+ +M + P+
Sbjct: 198 LITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ ++ L++C A+ G IH++I + GL T + + NALI MY K + +A ++F+
Sbjct: 258 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFD 317
Query: 135 NMKNKSVITWTTMIAGLALHGL-GREALD----MFSRMERARVKPNEITFIAILSACCHV 189
M + VI+W+ MIAG A G +E++D + RM R V PN++TF++IL AC
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G +E GR+ + S+ G E + ++ + G + EAE++ +M N W S
Sbjct: 378 GALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTS 435
Query: 250 LLAASNIYGDVELGE 264
L+ GD+ E
Sbjct: 436 FLSMYIKCGDLSSAE 450
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 174/397 (43%), Gaps = 62/397 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ-----MDQPNEAITLFRRMQ 67
N ++ Y K + AR +F+ M++++VISW+ +IAGYAQ + +E L RM+
Sbjct: 297 NALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMR 356
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
E V P+++ ++ L AC GA+E G IH + + G L A+ +MYAK G I
Sbjct: 357 REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIY 416
Query: 128 KALQVFENMKNKSVITWTT-------------------------------MIAGLALHGL 156
+A QVF M NK+V+ WT+ MIAG A +G
Sbjct: 417 EAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+ ++ S M+ +P+ +T I IL AC + +E G + + + G+E
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVAT 535
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD----VELGECALQHLIK 272
+I + + G + EA + +M A W ++LA +GD V+L + L+ +
Sbjct: 536 SLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAMLAGYGQHGDGLEAVDLFKRMLKERV- 593
Query: 273 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM--GVKKMP-----GCSYIEVSK--- 322
S N L+ + + R + R++ R M K P GC + +
Sbjct: 594 -----SPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGR 648
Query: 323 --RVHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 355
EF+ PD + +L CK + ++ AE
Sbjct: 649 LQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAE 685
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA+ E G+ +H +++ G+ + L N+LI+ Y+K + A QVF M + V+TW
Sbjct: 66 CAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTW 125
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++MIA A + +A D F RM A ++PN ITF++IL AC + ++E GR+ I+K+
Sbjct: 126 SSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKA 185
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+E + +I + + G + A ++ +M E N W +++ A+
Sbjct: 186 -MGMETDVAVATALITMYSKCGEISVACEVFHKMT-ERNVVSWTAIIQAN 233
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 221/336 (65%), Gaps = 19/336 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENV 71
N+++ Y+K GD+ +AR LF+ Q+DQ + EA+ LF RMQ +
Sbjct: 157 NSLLNVYSKSGDIKSARLLFD------------------QVDQRDTEALNLFHRMQTAGI 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D +A+++ L ACA LG ++ G+WIH YI+++ + L LIDMYAK G + +A++
Sbjct: 199 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIE 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M+ K V WT MI+G A+HG GREAL+ F +M+ A V+PN++TF IL+AC H GL
Sbjct: 259 VFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V + F M+ +G +P IE YGCM+DLLGRAG L+EAE+L+ MP + NAAIWG+LL
Sbjct: 319 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 378
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +I+G++ELG+ + LI+++P + G Y L++I+A G WN++ ++R+ M++ GV K
Sbjct: 379 NACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSK 438
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
+PGCS I V+ HEF+AGD SHP + +L +I
Sbjct: 439 LPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQI 474
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%), Gaps = 26/254 (10%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F+ + N W T+I GY+ +P EA+ L+ M +V + L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC+ + A+E + IH +I + G + + N+L+++Y+KSG I A +F+ + +
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT- 184
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNI 201
EAL++F RM+ A +K + + ++ L AC +G+++ G+ + I
Sbjct: 185 ----------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 228
Query: 202 MKSRYGIEPKIEQYGC-MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
K I+P + GC +ID+ + G L+EA ++ R+M E ++W ++++ I+G
Sbjct: 229 KKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHGR- 283
Query: 261 ELGECALQHLIKLE 274
G AL+ +K++
Sbjct: 284 --GREALEWFMKMQ 295
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A VF+ + + W TMI G + EAL ++ M V N TF +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 183 LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ------------ 229
L AC + +E ++ + +I+K +G E I ++++ ++G ++
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSE--IYTTNSLLNVYSKSGDIKSARLLFDQVDQR 182
Query: 230 --EAEKLLRRMPFEA----NAAIWGSLLAASNIYGDVELGE----CALQHLIKLEPHNSG 279
EA L RM N A+ +L A +++ G ++ G+ +H I+++P
Sbjct: 183 DTEALNLFHRMQTAGIKLDNVALVSTLQACADL-GVLDQGKWIHAYIKKHEIEIDPILG- 240
Query: 280 NYAILSNIYAILGRWNESGKIRKVMRDMGV 309
+L ++YA G E+ ++ + M + GV
Sbjct: 241 --CVLIDMYAKCGDLEEAIEVFRKMEEKGV 268
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 217/323 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ Y+ L A ++F ++ ++V+ W ++I+ AQ + A+ L R M + NV+
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + M++AL AC++L A+ G+ IH +I + GL+T + N+LIDMY + G I K+ ++
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +++W MI+ +HG G +A+++F + +KPN ITF +LSAC H GL+
Sbjct: 658 FDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLI 717
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +YF +MK+ Y ++P +EQY CM+DLL RAG E + + +MPFE NAA+WGSLL
Sbjct: 718 EEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ + +L E A ++L +LEP +SGNY +++NIY+ GRW ++ KIR +M++ GV K
Sbjct: 778 ACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKP 837
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP 335
PGCS+IEV +++H FV GDTSHP
Sbjct: 838 PGCSWIEVKRKLHSFVVGDTSHP 860
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 6/251 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN M+AGYA G A L M E ++I+W L+ G+ Q A+ F+RM
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ P+ + AL+AC Q+ ++LG+ IH Y+ + + + +ALI MY+ +
Sbjct: 492 SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLE 551
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A VF + + V+ W ++I+ A G ALD+ M + V+ N +T ++ L AC
Sbjct: 552 VACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ + G+ + R G++ +ID+ GR G +Q++ ++ MP + + W
Sbjct: 612 KLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSW 669
Query: 248 GSLLAASNIYG 258
+++ ++G
Sbjct: 670 NVMISVYGMHG 680
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 30/340 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT-----EKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
WN +++GYA+ G A F M + NV+SWT LIAG Q EA+++FR+M
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGK 125
+E VKP+ I + +A+SAC L + G IH Y I+ L++ + + N+L+D YAK
Sbjct: 354 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 413
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A + F +K +++W M+AG AL G EA+++ S M+ ++P+ IT+ +++
Sbjct: 414 VEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTG 473
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL---QEAEKLLRRMPFEA 242
G + +F M S G++P + G+ L +E + R E
Sbjct: 474 FTQYGDGKAALEFFQRMHS-MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
+ + +L++ +Y + E A +L ++ + + ++I + + S
Sbjct: 533 STGVGSALIS---MYSGCDSLEVACSVFSEL---STRDVVVWNSIISACAQSGRSVNALD 586
Query: 303 VMRDMG-----------VKKMPGCSYIEV---SKRVHEFV 328
++R+M V +P CS + K +H+F+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y + G + +AR +F+ M+E+NV SWT ++ Y + E I LF M E V+PD
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AC++L +G+ +++Y+ G + +++DM+ K G++ A + FE ++
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V W M++G G ++AL S M+ + VKP+++T+ AI+S G E +Y
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
F M +P + + +I + GY EA + R+M E
Sbjct: 314 FLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAA--LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
N A L M + N PDE + A L C +L + LG +H + G++ L +
Sbjct: 71 NNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGS 128
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
L+++Y ++G + A ++F+ M ++V +WT ++ G E + +F M V+P
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+ F + AC + +G+ ++ M S G E G ++D+ + G + A +
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRF 247
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILG 292
+ F+ + +W +++ G+ + L + L ++P AI+S YA G
Sbjct: 248 FEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSG 305
Query: 293 RWNESGK 299
++ E+ K
Sbjct: 306 QFEEASK 312
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 211/324 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G +++AR +F+ M ++V+SW +I +A+ + +EA LF +MQ E K
Sbjct: 269 TALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCK 328
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I L+ L+ACA GA+E + IH + GL V + AL+ MY+KSG I A V
Sbjct: 329 PDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVV 388
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK ++V++W MI+GLA HGLG++AL++F RM VKP+ +TF+A+LSAC H GLV
Sbjct: 389 FDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLV 448
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR + M YGIEP + CM+DLLGRAG L EA+ + M + + A WG+LL
Sbjct: 449 DEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLG 508
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ YG+VELGE + +KL+P N+ Y +LSNIYA G+W+ +R +MR+ G++K
Sbjct: 509 SCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKE 568
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPD 336
PG S+IEV ++H+F+ D+SHP+
Sbjct: 569 PGRSWIEVDNKIHDFLVADSSHPE 592
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 141/259 (54%), Gaps = 7/259 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G +N AR +F+ + ++ISWT +I YAQ EA L +M+ E KP+ I
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L+ACA GA++ + +H + GL V + AL+ MYAKSG I A VF+ MK
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ V++W MI A HG G EA D+F +M+ KP+ I F++IL+AC G +E ++
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + + S G+E + ++ + ++G + +A + RM N W ++++ +
Sbjct: 354 HRHALDS--GLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQH 410
Query: 258 GDVELGECALQHLIKLEPH 276
G LG+ AL+ ++ H
Sbjct: 411 G---LGQDALEVFRRMTAH 426
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 131/246 (53%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L AR +F+ + +K+ SW +IAGY + +A+ LFR M E V+
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L ACA L A++ G+ +H I GL + V + AL+ MY K G I +A ++
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+N+ N +I+WT MI A G G+EA + +ME+ KPN IT+++IL+AC G +
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +R G+E + ++ + ++G + +A + RM + W ++
Sbjct: 247 KWVKRVHR-HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIG 304
Query: 253 ASNIYG 258
A +G
Sbjct: 305 AFAEHG 310
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ L R+Q + D + L C + + + +H+ I + + + N L+ +
Sbjct: 14 VVLMNRLQ-RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y + G++ +A VF+ + KS +W MIAG H +A+ +F M V+PN T+
Sbjct: 73 YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTY 132
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ IL AC + ++ G+ ++ G+E + ++ + G+ G + EA ++
Sbjct: 133 MIILKACASLSALKWGKEVHACIR-HGGLESDVRVGTALLRMYGKCGSINEARRIF 187
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 226/343 (65%), Gaps = 3/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y G +A +F+ + E+N++SW +++ G+A +PNE +T+FR M N
Sbjct: 157 NSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVN 216
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD +++ L+A A++GA+ LG +H Y+ + GL + NALID+YAK G + A
Sbjct: 217 FMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDAR 276
Query: 131 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M ++V++WT++I GLA++G G+EAL++F MER ++ P EIT + +L AC H
Sbjct: 277 RVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHC 336
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G YFN MK Y I P+IE GCM+DLLGRAG ++EA + MP E NA +W +
Sbjct: 337 GLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRT 396
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +ELGE A L++L+P +SG+Y +LSN+YA +GRW + +RK M GV
Sbjct: 397 LLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGV 456
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K PG S +E+ V+EFV GD SHP+ +++YQ+L ++ ++
Sbjct: 457 RKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQMLAEVADSLR 499
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLF-RRMQVENVKPDEIAMLAALSACAQLG 89
L ++ + + S T++ A +P+ A+ L RR+ PD L ACA+L
Sbjct: 77 LTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRL----APPDTHTYPPLLQACARLL 132
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK--NKSVITWTTM 147
++ GE IH + GL T+V + N+L+ +Y G A +VF+ + +++++W +M
Sbjct: 133 SLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSM 192
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
+ G A +G E L +F M P+ T +++L+A +G + LGRR ++ ++ G
Sbjct: 193 LNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRR-VHVYLTKVG 251
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ +IDL + G +++A ++ M W SL+ + G
Sbjct: 252 LVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNG 302
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 223/339 (65%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YAK + AR +F+ M +KN+++W+ +++GY+++ NEA+ LFR MQ V+PDE+
Sbjct: 171 YAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVT 230
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF+ M
Sbjct: 231 MVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMV 290
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLVE GRR
Sbjct: 291 EKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR 350
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y++IM++ GI+P +E YGCM+DLL R+G L +A + MP N+ IW +LL A
Sbjct: 351 YWSIMQN-LGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSS 409
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+++ E A + L++LEPHN NY +LSN+YA +W+ +R+ M+ V + G S
Sbjct: 410 NRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSS 469
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +HEFV D SHP+ + +L ++ +++ A H
Sbjct: 470 IEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGH 508
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 20/369 (5%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI-AGYAQMDQPNEAI 60
F LS+LL + A+ + AR LF+ + + + +LI A A P A+
Sbjct: 53 FALSKLLASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAP--AL 110
Query: 61 TLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
++RRM + + +P+ + AL ACA + A G +H + GL T + L+++
Sbjct: 111 AVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNL 170
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
YAK ++ A VF+ M +K+++ W+ M++G + G+ EAL +F M+ V+P+E+T
Sbjct: 171 YAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVT 230
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++++SAC G ++LG ++ + R GI +E +ID+ + G ++ A + M
Sbjct: 231 MVSVISACAKAGALDLG-KWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAM 289
Query: 239 PFEANAAIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
E + W +++ I+G VE LG + +K+ P+N +LS A G +
Sbjct: 290 -VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSAC-AHSGLVED 347
Query: 297 SGKIRKVMRDMGVKKMP---GCSYIEVSKR-----VHEFVAGDTSHPD--FDRLYQILCK 346
+ +M+++G+K GC + + + FV G P+ R + CK
Sbjct: 348 GRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 407
Query: 347 INGQMKFAE 355
+ ++ AE
Sbjct: 408 SSNRIDIAE 416
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 221/341 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY V ++ A++ F M EKN++SW +I+G AQ+ EA+ F RM+++
Sbjct: 362 WNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGF 421
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A A+ +C+ LG+++ G +H + +YG + + NALI MYA+ G + A
Sbjct: 422 EPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHC 481
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F NM I+W MIA L HG G +A+++F M + + P+ I+F+ ++SAC H GL
Sbjct: 482 LFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGL 541
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF+ M + YG+ P E Y +IDLL RAG EA++++ MPFE A IW +LL
Sbjct: 542 VKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALL 601
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+++LG A + L +L+P + G Y +LSN+YA+ G+WN+ K+RK+MRD GVKK
Sbjct: 602 AGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKK 661
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV +VH F+ GD +HP+ ++Y L ++ +M+
Sbjct: 662 EPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMR 702
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T++ GY K DL+ A+ ++K ++W +I+GYA EA +FR+M + +
Sbjct: 226 WTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKI 285
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNY----IEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ DE + +S CA G LG+ +H Y + + +P+NNALI Y K GK+
Sbjct: 286 QLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVD 345
Query: 128 KALQVFEN-------------------------------MKNKSVITWTTMIAGLALHGL 156
A ++F M K++++W MI+GLA G
Sbjct: 346 IAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGF 405
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
EAL F+RM+ +P + F + +C +G ++ GR+ + RYG E +
Sbjct: 406 AEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ-LHAQVVRYGYESSLSAGN 464
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+I + R G + A L MP +A W +++AA +G
Sbjct: 465 ALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHG 505
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 153/368 (41%), Gaps = 53/368 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T++A Y+ GDL +R +F + ++ + + +I Y+ + AI LF MQ +N
Sbjct: 83 TTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN 142
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---- 125
+PD + L A A + E + +H + + G + + NALI Y K
Sbjct: 143 FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSA 202
Query: 126 -----IGKALQVFENMKNKSVITWTT-------------------------------MIA 149
+ +A ++F+ M N+ ++WTT MI+
Sbjct: 203 QSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMIS 262
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRY 206
G A GL EA +MF +M ++++ +E TF +++S C + G LG+ YF +
Sbjct: 263 GYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANP 322
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 266
+ + +I + G + A+++ +MP E + W +L+ Y +V + A
Sbjct: 323 APDVAMPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEA 378
Query: 267 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 326
++ N ++ I+ + A +G E+ K M+ G + C Y +
Sbjct: 379 KSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEP---CDYAFAGAIISC 435
Query: 327 FVAGDTSH 334
V G H
Sbjct: 436 SVLGSLKH 443
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 204/296 (68%), Gaps = 4/296 (1%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
EA+ +F +MQ E ++P + + + LSACA LGA++ G WIH Y ++ + L +L+
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 296
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
DMYAK G+I A +VFE M NK V +W MI GLA+HG +A+D+FS+M+ + PNEI
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEI 353
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
TF+ +L+AC H GLV+ G FN M+ YG+EP+IE YGC++DLLGRAG L EAEK++
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 413
Query: 238 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 297
+P E A+WG+LL A +G+VELGE + L++LEP NSG Y +LSNIYA GRW E
Sbjct: 414 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 473
Query: 298 GKIRKVMRDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G++RK+M++ G+K PG S I++ + VH+F+ GD SHP +YQ+L K+ +++
Sbjct: 474 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQ 529
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 TMVAGYAKVG-----DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++V YA V ++ +F+ + + NV W +I + ++P +AI L+ M V
Sbjct: 92 SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMV 151
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ +P++ A L AC+ G V G +H ++ ++GL + ++ I MYA G++ +
Sbjct: 152 AHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 211
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A ++ ++ + + G EAL++F +M++ +++P + ++LSAC +
Sbjct: 212 ARRILDDKGGE-----VDAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 266
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G ++ G R+ + R I+ ++D+ + G + A ++ +M + W
Sbjct: 267 LGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWN 324
Query: 249 SLLAASNIYGDVE 261
+++ ++G E
Sbjct: 325 AMIGGLAMHGRAE 337
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 54/286 (18%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V YAK G ++ A +FE M+ K V SW +I G A + +AI LF +M ++
Sbjct: 293 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIN 349
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+EI + L+ACA G V+ G I N + ++YG+ + ++D+ ++G + +A +
Sbjct: 350 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 409
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
V ++ +P + A+L AC G
Sbjct: 410 VVSSIP----------------------------------TEPTPAVWGALLGACRKHGN 435
Query: 192 VELGRRYFNIMKSRYGIEPKIE-QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VELG R I+ +EP+ +Y + ++ +AG +E ++ + M G+
Sbjct: 436 VELGERVGKILLE---LEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 492
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
+ ++LG + I G++ + +IY +L + E
Sbjct: 493 I--------IDLGRGEVHKFII----GDGSHPQVKDIYQMLDKVKE 526
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 223/339 (65%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YAK + AR +F+ M +KN+++W+ +++GY+++ NEA+ LFR MQ V+PDE+
Sbjct: 220 YAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVT 279
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF+ M
Sbjct: 280 MVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMV 339
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLVE GRR
Sbjct: 340 EKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR 399
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y++IM++ GI+P +E YGCM+DLL R+G L +A + MP N+ IW +LL A
Sbjct: 400 YWSIMQN-LGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSS 458
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+++ E A + L++LEPHN NY +LSN+YA +W+ +R+ M+ V + G S
Sbjct: 459 NRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSS 518
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +HEFV D SHP+ + +L ++ +++ A H
Sbjct: 519 IEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGH 557
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 20/369 (5%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI-AGYAQMDQPNEAI 60
F LS+LL + A+ + AR LF+ + + + +LI A A P A+
Sbjct: 102 FALSKLLASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAP--AL 159
Query: 61 TLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
++RRM + + +P+ + AL ACA + A G +H + GL T + L+++
Sbjct: 160 AVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNL 219
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
YAK ++ A VF+ M +K+++ W+ M++G + G+ EAL +F M+ V+P+E+T
Sbjct: 220 YAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVT 279
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++++SAC G ++LG ++ + R GI +E +ID+ + G ++ A + M
Sbjct: 280 MVSVISACAKAGALDLG-KWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAM 338
Query: 239 PFEANAAIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
E + W +++ I+G VE LG + +K+ P+N +LS A G +
Sbjct: 339 -VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSAC-AHSGLVED 396
Query: 297 SGKIRKVMRDMGVKKMP---GCSYIEVSKR-----VHEFVAGDTSHPD--FDRLYQILCK 346
+ +M+++G+K GC + + + FV G P+ R + CK
Sbjct: 397 GRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 456
Query: 347 INGQMKFAE 355
+ ++ AE
Sbjct: 457 SSNRIDIAE 465
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 217/316 (68%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V G+AKVG+L AR LF+ M +++VISWT++I GY+Q Q ++A+ LF+ M V
Sbjct: 286 WNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKV 345
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD++ + + LSACA LG +++G +H+YI ++G+ + + N+LIDMY K G + KAL+
Sbjct: 346 KPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALE 405
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF MK+K ++WT++I+GLA++G ALD+FS+M R V+P TF+ IL AC H GL
Sbjct: 406 VFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGL 465
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G YF M+S +G+ P ++ YGC++DLL R+G + +A + +++MP + +W LL
Sbjct: 466 VNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILL 525
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++G+V L E A + L++L+P +SGNY +LSN YA + RW+++ K+R++M D V+K
Sbjct: 526 SACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQK 585
Query: 312 MPGCSYIEVSKRVHEF 327
G S IEV V +
Sbjct: 586 PSGSSSIEVDGMVSNY 601
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 146/277 (52%), Gaps = 33/277 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA G L A+ +F+ M +++++SW TLI GY+Q ++ E + LF M N+K
Sbjct: 155 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 214
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY------------ 120
D + M+ + AC+ LG E + + YI++ L V L N LIDMY
Sbjct: 215 ADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGV 274
Query: 121 -------------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
AK G + A ++F+NM + VI+WT+MI G + +A+
Sbjct: 275 FDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAV 334
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M A+VKP+++T ++LSAC H+G +++G + ++ R+G++ I +ID+
Sbjct: 335 KLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIR-RHGVQADIYVGNSLIDM 393
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G +++A ++ RM + ++ W S+++ + G
Sbjct: 394 YCKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG 429
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 2/228 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
+L+ A +F + ++ W +I G +Q D P EAI ++ RM + + + + ++
Sbjct: 65 NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFK 124
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
ACA++ + G IH + + G + + ++NALI MYA G++G A ++F+ M ++ +++
Sbjct: 125 ACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVS 184
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W T+I G + + +E L +F M A +K + +T + I+ AC H+G E +K
Sbjct: 185 WNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIK 244
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E + +ID+ GR + A+ + RM E N W +L+
Sbjct: 245 EN-NLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMR-ERNIVSWNALV 290
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYA-KSGKIGKALQVFENMKNKSVITWTTMI 148
+ + + +H ++ + L+T L + +I Y+ S + KA VF ++ +++ W MI
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
GL+ EA+ M++RM + N +T I + AC V + GR+ ++ + G
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRK-IHVHALKLGF 147
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
E + +I + G L A+K+ M + + W +L+ + Y
Sbjct: 148 ESYLFVSNALIHMYAMCGQLGFAQKMFDGM-LDRDLVSWNTLICGYSQY 195
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 228/349 (65%), Gaps = 3/349 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ Y++ GD+++A LF+ M+ + +SWT +I+GY+++ + ++A+ LF M+ K
Sbjct: 295 NTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEK 354
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +L+ +S C + GA+ LG WI NY + L V + NALIDMYAK G + A ++
Sbjct: 355 PDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREI 414
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ N++V++WT MIA AL+G REALD+FS + + ++PN ITF+A+L ACCH G +
Sbjct: 415 FYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYL 474
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR F +M RYGI P ++ Y CMIDLLGR G L EA ++++ MP + + IWG+LL
Sbjct: 475 EKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLG 534
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++E+GE ++L +L+P + ++ ++NIYA +GRW+E +RK MR ++K
Sbjct: 535 ACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKS 594
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQ 358
PG S ++V+ H F D SH D +Y+ L + QMK F+ H Q
Sbjct: 595 PGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQ 643
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 147/276 (53%), Gaps = 6/276 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT +A Y+K G+L A+ +F + T ++ +SW +LIA YA + +A+ ++ + +
Sbjct: 192 NTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDG 251
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD +++ LS+C Q A+ G IH + Q G ++ + L N LI MY++ G I A
Sbjct: 252 FKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAT 311
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M ++ ++WT MI+G + G +AL +F+ ME KP+ +T ++++S C G
Sbjct: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTG 371
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ LG + + S + ++ + +ID+ + G L +A ++ +P W ++
Sbjct: 372 ALGLG-HWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLP-NRTVVSWTAM 429
Query: 251 LAASNIYGDVE--LGECALQHLIKLEPHNSGNYAIL 284
+AA + G+ L +L +EP+N A+L
Sbjct: 430 IAACALNGEFREALDLFSLLSESGIEPNNITFLAVL 465
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 14/254 (5%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
MV Y K G +++A LF+ M +N+ SW +I G++Q+ + LF M++ +PD
Sbjct: 93 MVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPD 152
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ A ++ + +H + GL+ ++N I Y+K G++ A VF
Sbjct: 153 AATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFH 212
Query: 135 NMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH---- 188
++ +S ++W ++IA A G +A+ + + KP+ T I++LS+C
Sbjct: 213 GIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEAL 272
Query: 189 -VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
G + G + + G + I +I + R G + A L M + W
Sbjct: 273 IYGFLIHGHGF------QLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVS-W 325
Query: 248 GSLLAASNIYGDVE 261
++++ + G V+
Sbjct: 326 TAMISGYSEVGRVD 339
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W + I G ++A+ LF ++++ ++P+ ACA+L + + IH ++
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ + + + A++DMY K GK+ A +F+ M +++ +W MI G + G +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+F M +P+ T I + A + + + + G++ I
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRF-LKAVHAIGIETGLDADTSVSNTWIAAY 198
Query: 223 GRAGYLQEAEKLLRRMPFEANAAI-WGSLLAASNIYG 258
+ G LQ A+ + + A +++ W SL+A +G
Sbjct: 199 SKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFG 235
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG-LVELG 195
K ++ W + I G G +AL +F +++ ++PN TF + AC + L
Sbjct: 13 KLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQ 72
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ +++KS + + ++ M+D+ + G + +A L +MP N A W +++ +
Sbjct: 73 IIHTHVVKSPFYSDIYVQT--AMVDMYVKCGKVDDAYNLFDKMPVR-NIASWNAMIIGFS 129
Query: 256 IYGDVE 261
G ++
Sbjct: 130 QIGSLD 135
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 213/337 (63%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV GY+K GD++ AR LF+ KNV+ WTT+IAGYA+ EA L+ +M+ +
Sbjct: 253 WSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGL 312
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ +++ L+ACA+ G + LG+ IH + ++ + NA IDMYAK G + A
Sbjct: 313 RPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFD 372
Query: 132 VFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M K V++W +MI G A+HG G +AL++FSRM +P+ TF+ +L AC H G
Sbjct: 373 VFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAG 432
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR+YF M+ YGI P++E YGCM+DLLGR G+L+EA LLR MP E NA I G+L
Sbjct: 433 LVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTL 492
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ DV+ + L K+EP + GNY++LSNIYA G W +R M + G +
Sbjct: 493 LNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQ 552
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K G S IEV + VHEF D SHP D +Y+++ ++
Sbjct: 553 KPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRL 589
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 25/261 (9%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ-MDQPNEAITLFRRMQVENVKP 73
++A ++ L +A +F + NV + ++I +A P+ F +MQ + P
Sbjct: 59 LIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFP 118
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQ 131
D L AC ++ L IH ++E++G + + N+LID Y++ G G A+
Sbjct: 119 DNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMS 178
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
+F MK + V+TW +MI GL G A +F M ER V N +L G
Sbjct: 179 LFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWN-----TMLDGYAKAG 233
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ F M R I + M+ + G + A L R P + N +W ++
Sbjct: 234 EMDRAFELFERMPQR-----NIVSWSTMVCGYSKGGDMDMARVLFDRCPAK-NVVLWTTI 287
Query: 251 LA----------ASNIYGDVE 261
+A A+ +YG +E
Sbjct: 288 IAGYAEKGFVREATELYGKME 308
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 225/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T+V+GY K GD+ AR +F+ M KN+++WT +++ AQ EA LF +M+ V
Sbjct: 284 WSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAV 343
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D A+++ L+ACA+ G++ LG+ IH Y+ L + NA+IDM+ K G + +A
Sbjct: 344 ELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADY 403
Query: 132 VFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ + K ++W T+I G A+HG G +ALD F++M+ +P+ +T I +LSAC H+G
Sbjct: 404 VFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMG 463
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE GR++F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP++ N IWGSL
Sbjct: 464 FVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSL 523
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 524 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 583
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S+IE+ + HEF GD H D D++ +++ +++ +K
Sbjct: 584 KSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSHVK 625
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 42/284 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISW--TTLIAGYAQMDQPNEAITLFRRMQVEN 70
+ +++ YA L +R +F ++ TL+ YA P+ A++LF M
Sbjct: 94 SKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMP--- 150
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ D + A + G L +H+++ + G + NALID Y+K+G A
Sbjct: 151 -QRDSFTYSFLIKALSSSGLTPL-RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDAS 208
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----------------------- 167
+VFE M + ++W + +A + G A MF M
Sbjct: 209 KVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMED 268
Query: 168 --ERARVKP--NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
E + P N +++ ++S C G +E+ R F+ M ++ + + M+
Sbjct: 269 AFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTK-----NLVTWTIMVSACA 323
Query: 224 RAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGE 264
+ G ++EA +L +M E + A S+LAA G + LG+
Sbjct: 324 QNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGK 367
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 228/350 (65%), Gaps = 5/350 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ Y+ L A ++F ++ ++V+ W ++I+ AQ + A+ L R M + NV+
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + M++AL AC++L A+ G+ IH +I + GL+T + N+LIDMY + G I K+ ++
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +++W MI+ +HG G +A+++F +KPN ITF +LSAC H GL+
Sbjct: 658 FDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLI 717
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +YF +MK+ Y ++P +EQY CM+DLL RAG E + + +MPFE NAA+WGSLL
Sbjct: 718 EEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ + +L E A ++L +LEP +SGNY +++NIY+ GRW ++ KIR +M++ GV K
Sbjct: 778 ACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKP 837
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PGCS+IEV +++H FV GDTSHP L + + +G++ E + EFS
Sbjct: 838 PGCSWIEVKRKLHSFVVGDTSHP----LMEQISGKDGKLDVDED-EKEFS 882
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 6/251 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN M+AGYA G A L M E ++I+W L+ G+ Q A+ F+RM
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ P+ + AL+AC Q+ ++LG+ IH Y+ + + + +ALI MY+ +
Sbjct: 492 SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLE 551
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A VF + + V+ W ++I+ A G ALD+ M + V+ N +T ++ L AC
Sbjct: 552 VACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ + G+ + R G++ +ID+ GR G +Q++ ++ MP + + W
Sbjct: 612 KLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSW 669
Query: 248 GSLLAASNIYG 258
+++ ++G
Sbjct: 670 NVMISVYGMHG 680
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 30/340 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT-----EKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
WN +++GYA+ G A F M + NV+SWT LIAG Q EA+++FR+M
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGK 125
+E VKP+ I + +A+SAC L + G IH Y I+ L++ + + N+L+D YAK
Sbjct: 354 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 413
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A + F +K +++W M+AG AL G EA+++ S M+ ++P+ IT+ +++
Sbjct: 414 VEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTG 473
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL---QEAEKLLRRMPFEA 242
G + +F M S G++P + G+ L +E + R E
Sbjct: 474 FTQYGDGKAALEFFQRMHS-MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
+ + +L++ +Y + E A +L ++ + + ++I + + S
Sbjct: 533 STGVGSALIS---MYSGCDSLEVACSVFSEL---STRDVVVWNSIISACAQSGRSVNALD 586
Query: 303 VMRDMG-----------VKKMPGCSYIEV---SKRVHEFV 328
++R+M V +P CS + K +H+F+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y + G + +AR +F+ M+E+NV SWT ++ Y + E I LF M E V+PD
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AC++L +G+ +++Y+ G + +++DM+ K G++ A + FE ++
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V W M++G G ++AL S M+ + VKP+++T+ AI+S G E +Y
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
F M +P + + +I + GY EA + R+M E
Sbjct: 314 FLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAA--LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
N A L M + N PDE + A L C +L + LG +H + G++ L +
Sbjct: 71 NNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGS 128
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
L+++Y ++G + A ++F+ M ++V +WT ++ G E + +F M V+P
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+ F + AC + +G+ ++ M S G E G ++D+ + G + A +
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRF 247
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILG 292
+ F+ + +W +++ G+ + L + L ++P AI+S YA G
Sbjct: 248 FEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSG 305
Query: 293 RWNESGK 299
++ E+ K
Sbjct: 306 QFEEASK 312
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 215/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY + G L+NA +F+ M K+ +SW +++GY +A+ LF +M+ E+V
Sbjct: 369 WNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDV 428
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP + A++AC +LGA++ G+ +H ++ Q G NAL+ MYA+ G + A
Sbjct: 429 KPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARL 488
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M N ++W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H GL
Sbjct: 489 VFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGL 548
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +YF M+ +GI P + Y +IDLLGRAG + EA L++ MPFE AIW ++L
Sbjct: 549 VDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAIL 608
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ I GD+ELG A L K+ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK
Sbjct: 609 SGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 668
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV +VH F+ GDT HPD +Y+ L + +M+
Sbjct: 669 EPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMR 709
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+V G+ + GD++ AR+ FE + + + W +I+GY Q EA LFRRM + +
Sbjct: 233 WTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRI 292
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIG 127
PDE + LSACA G G+ +H + +P+NNAL+ +Y+KSGKI
Sbjct: 293 PPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIA 352
Query: 128 KALQVFENMKNKSVITWTT-------------------------------MIAGLALHGL 156
A ++F++M K V++W T M++G GL
Sbjct: 353 VATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL +F++M VKP + T+ ++AC +G ++ G++ + + G E
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQ-LHAHLVQCGFEASNSAGN 471
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++ + R G +++A + MP ++ W ++++A +G
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMISALGQHG 512
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 44/283 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-- 68
++V+ YA G L ++ A F+ + ++ + +I+ +A+ A+++FR +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 69 ENVKPDEIAMLAALSACAQLG--AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
++++PD+ + + LSA Q+ AV +H + + G ++ ++NALI +Y K
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212
Query: 127 G---KALQVFENMKNKSVITWTT-------------------------------MIAGLA 152
G A +V + M K +TWTT MI+G
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY---FNIMKSRYGIE 209
G+ EA ++F RM R+ P+E TF ++LSAC + G G+ F ++ + E
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++ L ++G + A K+ M + + W ++L+
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILS 374
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 234/351 (66%), Gaps = 2/351 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN+++AGYA+ G + A LF M +NVISWT LI+GYAQ + +A+ +F ++ E
Sbjct: 151 WNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKG 210
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP+E+++ + L AC+QLGA+++G+ I Y G ++NA+++++A+ G I +A
Sbjct: 211 TKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQ 270
Query: 131 QVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF+ + +K ++ +W TMI GLA+HG +AL ++ +M +++P+++TF+ +L AC H
Sbjct: 271 QVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHG 330
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V GR+ F M+S++ + PK+E YGC++DLLGRAG LQEA L++ MP ++ IWG+
Sbjct: 331 GMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGT 390
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VELGE A + L KLEP N GNY ILSNIYA+ G W+ ++RK+M+ +
Sbjct: 391 LLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHI 450
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
K G SYIEV +HEF+ D SH +Y +L KI +K +H+ ++
Sbjct: 451 TKRAGYSYIEVGDGIHEFIVEDRSHLKSGEIYALLHKIYDIIKLHKHVHHD 501
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 33/270 (12%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 80
++ DL A LF+ + + +V + I ++ + P+ L+ +M + P++ +
Sbjct: 28 QLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTF 87
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------------ 122
ACA L V G+ +H++ + G + + AL+DMYAK
Sbjct: 88 LFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRD 147
Query: 123 -------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
SG + AL++F M ++VI+WT +I+G A +G +AL+MF +E
Sbjct: 148 IPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLEN 207
Query: 170 AR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ KPNE++ ++L AC +G +++G+R ++ G +++L R G +
Sbjct: 208 EKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNN-GFFKNAYVSNAVLELHARCGNI 266
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+EA+++ + + N W +++ ++G
Sbjct: 267 EEAQQVFDEIGSKRNLCSWNTMIMGLAVHG 296
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 23/242 (9%)
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
I Y L + LI+ + + A +F+ + SV + I + G
Sbjct: 7 IHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRC 66
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
++ +M PN+ +F + AC + V G+ + + KS G + ++
Sbjct: 67 WLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS--GFASDMFAMTALL 124
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
D+ + G L+ A +L MP + W SL+A G + E AL+ K+ N
Sbjct: 125 DMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHM---EAALELFNKMPVRNVI 180
Query: 280 NYAILSNIYAILGRW-----------NESGKIRKVMRDMGVKKMPGCSY---IEVSKRVH 325
++ L + YA G++ NE G + V +P CS +++ KR+
Sbjct: 181 SWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV--LPACSQLGALDIGKRIE 238
Query: 326 EF 327
+
Sbjct: 239 AY 240
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 237/361 (65%), Gaps = 5/361 (1%)
Query: 13 NTMVAGYAKVG--DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-- 68
NT++ YAK G DL AR LF++M +++V+SW T+IA YAQ EA+ L+ +M +
Sbjct: 231 NTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVG 289
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+V+ + + + A L ACA GA++ G+ IHN + + GL V + +++DMY+K GK+
Sbjct: 290 GDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEM 349
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F+ +K K++++W+ MIAG +HG G+EAL +F+ M ++ +KPN ITFI +L+AC H
Sbjct: 350 AWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSH 409
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL+ GR ++N MK+ +GIEP +E YGCM+DLLGRAG L EA L++ M + +AA+WG
Sbjct: 410 AGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWG 469
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A IY +VEL + + L +L+ NSG Y +LSNIYA G W E ++R +++ G
Sbjct: 470 ALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRG 529
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG S +E+ + H F GD SHP + +Y L K+ ++ A ++ N S + + D
Sbjct: 530 IEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLD 589
Query: 369 V 369
V
Sbjct: 590 V 590
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 125/238 (52%), Gaps = 9/238 (3%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSA 84
+AR F+ + N + T + +G + + +++FR M DE A L ALSA
Sbjct: 142 DARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSA 201
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--KIGKALQVFENMKNKSVI 142
A++ + IH + + GL+ + N +ID YAK G +G A ++F+ M ++ V+
Sbjct: 202 SARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVV 260
Query: 143 TWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
+W TMIA A +GL EAL ++S+M V+ N +T A+L AC H G ++ G+R N
Sbjct: 261 SWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHN 320
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G+E + ++D+ + G ++ A K +++ + N W +++A ++G
Sbjct: 321 QV-VRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGK-NILSWSAMIAGYGMHG 376
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 222/351 (63%), Gaps = 4/351 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N + G ++ G ++ A +FEL E+ NV+SWT++IAG AQ + EA+ LFR MQV
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
VKP+ + + + L AC + A+ G H + + L V + +ALIDMYAK G+I
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ VF M K+++ W +++ G ++HG +E + +F + R R+KP+ I+F ++LSAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
VGL + G +YF +M YGI+P++E Y CM++LLGRAG LQEA L++ MPFE ++ +WG
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL + + +V+L E A + L LEP N G Y +LSNIYA G W E IR M +G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+KK PGCS+I+V RV+ +AGD SHP D++ + + +I+ +M+ + H N
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPN 672
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNA-RALFELMT---EKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
+ ++ YA+ G L R L E+ + E N++SW +++G+ + EA+ +F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--- 125
PD++ + + L + + +G IH Y+ + GL + +A+IDMY KSG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 126 ----------------------------IGKALQVFENMKNKS----VITWTTMIAGLAL 153
+ KAL++FE K ++ V++WT++IAG A
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+G EAL++F M+ A VKPN +T ++L AC ++ + GR R + +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF-AVRVHLLDNVH 424
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G + ++ + MP + N W SL+ +++G
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 87/171 (50%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A Y+ N+A + + + + + S+++LI + ++I +F RM + PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ CA+L A ++G+ IH GL+ + ++ MY + G++G A +VF+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M +K V+T + ++ A G E + + S ME + ++ N +++ ILS
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 220/332 (66%), Gaps = 1/332 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V Y K ++ AR +FE M +N+++WT +I+G+A++ +EA+ LFR MQ ++
Sbjct: 131 TSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQ 190
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +++ +SACA GA+++G W+H YIE+Y + T + L+ AL+DMYAK G I +A QV
Sbjct: 191 PDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQV 250
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M K W++MI G A HGL ++A+D F +M V P+ +TF+A+LSAC H GLV
Sbjct: 251 FVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLV 310
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRR++++M +GIEP +E YGC +DLL R+G ++EA ++ M NAA W SLL
Sbjct: 311 SRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLM 369
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ LGE ++L++LEP N+ NY ++SN+Y+ L +W + ++RKVM++ +K +
Sbjct: 370 GCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPV 429
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS IEV VHEFV GD SHP+ L + +
Sbjct: 430 PGCSSIEVDGVVHEFVMGDQSHPEVKMLREFM 461
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVK-PDEIAMLA 80
G++N AR++F + N+ SW +LI GY+Q+ E I LF+++ P+ +
Sbjct: 38 GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
L ACA + A G +H+++ + G + + + +L++ Y K +IG A +VFE M ++
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++ WT MI+G A G EA+++F M++A ++P+ +T ++++SAC G +++G + +
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIG-YWLH 216
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
+Y + +E ++D+ + G ++ A+++ MP + A W S++ +G
Sbjct: 217 AYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTA-WSSMIMGFAYHGLA 275
Query: 261 ELGECALQHLIKLE--PHNSGNYAILS 285
+ A Q +++ E P + A+LS
Sbjct: 276 QDAIDAFQQMLETEVTPDHVTFLAVLS 302
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 217/342 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G + AR LF+ EKN+ SW +I G+ + EA+ LFR MQ + +K D++ M
Sbjct: 232 YCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTM 291
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L AC LGA+ELG+W+H YI++ ++ V L AL+DMYAK G I A+QVF M
Sbjct: 292 ASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V+TWT +I GLA+ G AL F M VKP+ ITF+ +L+AC H G V+ G +
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
FN M YGI+P IE YG ++D+LGRAG + EAE+L++ MP + + G LL A I+G
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHG 471
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
++E E A + L++++P++SG Y +LSNIY +W E+ + R++M + G++K PGCS I
Sbjct: 472 NLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQI 531
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
EV VHEFV GD+SH + ++L + ++K A ++ ++
Sbjct: 532 EVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDK 573
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 144/250 (57%), Gaps = 3/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
NT++ Y+ G L +AR +F+ M +K V+SW T+I +AQ DQPNEA+ LF RM + ENV
Sbjct: 124 NTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENV 183
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E+ ++ L+ACA+ + + + IH YI+++G V LN L+D+Y K G + A
Sbjct: 184 KPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARD 243
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + K++ +W MI G EAL +F M+ +K +++T ++L AC H+G
Sbjct: 244 LFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGA 303
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG+ +K + I+ + ++D+ + G ++ A ++ MP E + W +L+
Sbjct: 304 LELGKWLHAYIKKQR-IDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALI 361
Query: 252 AASNIYGDVE 261
+ G E
Sbjct: 362 LGLAMCGQAE 371
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L AR +F + + ++I G + EA+ ++ M V+ + PD +
Sbjct: 36 GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+C G+ IH + + G + N L++MY+ G + A +VF+ M++K+V+
Sbjct: 96 KSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVV 152
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNI 201
+W TMI A EA+ +F RM ++ VKPNE+T + +L+AC + + +R
Sbjct: 153 SWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEY 212
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ +G + ++D+ + G +Q A L + E N W ++
Sbjct: 213 I-DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQ-EKNLFSWNIMI 260
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G + A +F M EK+V++WT LI G A Q A+ F M ++ VK
Sbjct: 327 TALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVK 386
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I + L+AC+ G V+ G ++ + YG+ + L+D+ ++G+I +A +
Sbjct: 387 PDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEE 446
Query: 132 VFENM 136
+ ++M
Sbjct: 447 LIKSM 451
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 225/357 (63%), Gaps = 1/357 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++ AG+ + GD+ +A +F + E+N + W T+I+G Q +AI LFR MQ E +
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K D + M+ SAC LGA EL +W+H YIE+ G+ + LN AL+DM+A+ G A+Q
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQ 521
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M + V WT I +A+ G G A +F++M VKP+ + F+ +L+AC H G
Sbjct: 522 VFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQ 581
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G F++M+ +GI P+IE YGCM+DLLGRAG L+EA L++ MP E N +WGSLL
Sbjct: 582 VEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++ +VE+ A + + +L P +G + +LSNIYA G+W + ++R +R+ GV+K
Sbjct: 641 AACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK 700
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+PG S ++V+ +HEF +GD SHP+ + +L ++N + A H+ + + +L+ D
Sbjct: 701 VPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVD 757
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 141/253 (55%), Gaps = 10/253 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA+ G +++ +FE M+E+NV+SWT+LI GYA+ D+P EA++LF M ++
Sbjct: 170 NCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIR 229
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + M+ +SACA+L +++GE + YI + GL + NAL+DMY K G I A ++
Sbjct: 230 PSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRL 289
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +++++ + T+++ A GL REAL + M + +P+ +T ++ +SA LV
Sbjct: 290 FDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ--LV 347
Query: 193 ELGRRYFNIMKSRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+L ++ + Y I +E + +ID+ + G + A ++ M W
Sbjct: 348 DL---FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS-NKTVVSWN 403
Query: 249 SLLAASNIYGDVE 261
SL A GDVE
Sbjct: 404 SLTAGFIRNGDVE 416
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K G ++ A+ LF+ ++N++ + T+++ YA+ EA+ + M + +
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ML+A+SA AQL + G+ H Y+ + GL + N +IDMY K GK A +V
Sbjct: 331 PDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRV 390
Query: 133 FENMKNKSVIT-------------------------------WTTMIAGLALHGLGREAL 161
F+ M NK+V++ W TMI+GL L +A+
Sbjct: 391 FDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAI 450
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F M+ +K + +T + I SAC ++G EL ++ + + GI + ++D+
Sbjct: 451 ELFREMQGEGIKADRVTMMGIASACGYLGAPELA-KWVHTYIEKNGIPCDMRLNTALVDM 509
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
R G Q A ++ +M E + + W + + + G+ E
Sbjct: 510 FARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGE 548
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 25 LNNARALFELMTEK-----NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
L+ AR FEL E + +LI GY+ EAI L+ RM V V P+
Sbjct: 76 LDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
LS C ++ A G +H + + GL V + N LI YA+ G + +VFE M +
Sbjct: 136 FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V++WT++I G A +EA+ +F M A ++P+ +T + ++SAC + +++G R
Sbjct: 196 NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVC 255
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G++ ++D+ + G + A++L + N ++ ++L+
Sbjct: 256 AYI-GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDEC-VDRNLVLYNTILS 306
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 215/347 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q E + LF M
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A LS CA + A+E G +H + + G + NAL+ MY K G + A
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M+ + V++W TMIAG A HG G+EAL++F M KP++IT + +L+AC H GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W ++ K+R +M + GVKK
Sbjct: 560 GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKK 619
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A ++
Sbjct: 620 VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVS 666
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GYA+ GD+ AR LF+ ++V +WT +++GYAQ EA +F M N
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA 286
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A ++A Q ++ + + N + + + N ++ YA++G + +A
Sbjct: 287 ----VSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKA 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K ++W M+A + G E L +F M R N F +LS C +
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAA 245
+E G + + ++++ YG+ GC + + + G +++A M E +
Sbjct: 399 LECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVV 450
Query: 246 IWGSLLAASNIYG 258
W +++A +G
Sbjct: 451 SWNTMIAGYARHG 463
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 57/262 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + G + AR LF TE +VISW L++GY Q + +EA LF RM +V
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV 224
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N ++ YA+ G + +A +
Sbjct: 225 V----------------------SW-----------------NIMVSGYARRGDMVEARR 245
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + V TWT +++G A +G+ EA +F M + N +++ A+++A +
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRM 301
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + FN+M R + + M+ +AG L+EA+ + MP + +A W ++L
Sbjct: 302 MDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAML 355
Query: 252 AASNIYGD--------VELGEC 265
AA + G +E+G C
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRC 377
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVE 261
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 221/328 (67%), Gaps = 4/328 (1%)
Query: 19 YAKVGDLNNARALFELMTE----KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
Y K G+L +AR +FE M E K+ + WT +I G+ + ++ N A+ FR MQ ENV+P+
Sbjct: 182 YGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPN 241
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E ++ LSAC+QLGA+E+G W+H+Y+ ++ + + + NALI+MY++ G I +A VF+
Sbjct: 242 EFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFD 301
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
MK++ VIT+ TMI+GL+++G R+A+++F M R++P +TF+ +L+AC H GLV+
Sbjct: 302 EMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDF 361
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G F+ M Y +EP+IE YGCM+DLLGR G L+EA L+R M + + G+LL+A
Sbjct: 362 GFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSAC 421
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++ ++ELGE + L +SG Y +LS++YA G+W E+ ++R M++ G++K PG
Sbjct: 422 KMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPG 481
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
CS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 482 CSSIEVNNEIHEFLLGDLRHPQKERIYE 509
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+K ++ A +F+ NV +T LI G+ EAI L+ RM E++ PD M
Sbjct: 82 SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMA 141
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN- 138
+ L AC A+ G +H+ + G ++ + ++++Y K G++G A +VFE M
Sbjct: 142 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 201
Query: 139 ---KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
K + WT MI G + AL+ F M+ V+PNE T + +LSAC +G +E+G
Sbjct: 202 VVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 261
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
R + M+ ++ IE + +I++ R G + EA+ + M
Sbjct: 262 RWVHSYMR-KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++ G ++ A+ +F+ M +++VI++ T+I+G + + +AI LFR M ++
Sbjct: 281 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLR 340
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + + L+AC+ G V+ G E H+ Y + + ++D+ + G++ +A
Sbjct: 341 PTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYD 400
Query: 132 VFENMK-NKSVITWTTMIAGLALH 154
+ MK I T+++ +H
Sbjct: 401 LIRTMKMTPDHIMLGTLLSACKMH 424
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ +K I A ++F+ N +V +T +I G G EA+ ++SRM + P+
Sbjct: 77 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 136
Query: 176 EITFIAILSAC-----------CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
+IL AC H ++LG +++ R +++L G+
Sbjct: 137 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR------------IMELYGK 184
Query: 225 AGYLQEAEKLLRRMPFEA---NAAIWGSLL 251
G L +A ++ MP + + W +++
Sbjct: 185 CGELGDARRVFEEMPEDVVAKDTVCWTAMI 214
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 210/334 (62%), Gaps = 2/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M+ GY GD+ +AR LF+ M EKN++SW +I GY Q QP+EA+ LFR +Q V
Sbjct: 233 WTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTV 292
Query: 72 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P+E+ +++ L A A LGA+ELGEW+H ++++ L+ V + +L+DMY K G+I KA
Sbjct: 293 FEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKAR 352
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF + K TW +I G A++GL EAL+ FS M++ +KPN+IT +LSAC H G
Sbjct: 353 KVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGG 412
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ F M G+ PKIE YGC++DLLGRAG L EAE L++ MPFEAN I S
Sbjct: 413 LVEEGKGQFKAMIES-GLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSF 471
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
A DV + L + +EP N+G Y ++ N+YA+ RW + +I +MR G K
Sbjct: 472 SFACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAK 531
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K G S IEV RV EF++G +HP D + ++
Sbjct: 532 KEVGSSAIEVDSRVSEFISGGIAHPQLDVIESVI 565
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 54/343 (15%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRR 65
+L KF T ++ +AR LF+ + + + ++I + M Q +A TL++
Sbjct: 36 ILTKFITTC----GQLSSTRHARHLFDNRSHRGDTFLCNSMIKSHVVMRQLADAFTLYKD 91
Query: 66 MQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
++ E PD CA AV G H ++ + G + ++ AL+DMYAK G
Sbjct: 92 LRRETCFVPDNFTFTVLAKCCALRMAVWEGLETHGHVVKIGFCFDMYVSTALVDMYAKFG 151
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHG------------LGREA------LDMFSR 166
+G A +VF +M ++S+++WT +I G G GR++ +D + +
Sbjct: 152 NLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVK 211
Query: 167 ---MERARV------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
ME AR + N I++ +++ C+ G V R F+ M E + +
Sbjct: 212 VGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMP-----EKNLVSWNA 266
Query: 218 MIDLLGRAGYLQ-----EAEKLLRRMP----FEANAAIWGSLLAASNIYGDVELGECALQ 268
MI GY Q EA KL R + FE N S+L A G +ELGE +
Sbjct: 267 MI-----GGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHR 321
Query: 269 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ + + + N + +++ + + E K RKV ++ K+
Sbjct: 322 FVQRKKLDAAVN--VCTSLVDMYLKCGEISKARKVFSEIPKKE 362
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 222/351 (63%), Gaps = 4/351 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N + G ++ G ++ A +FEL E+ NV+SWT++IAG AQ + EA+ LFR MQV
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
VKP+ + + + L AC + A+ G H + + L V + +ALIDMYAK G+I
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ VF M K+++ W +++ G ++HG +E + +F + R R+KP+ I+F ++LSAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
VGL + G +YF +M YGI+P++E Y CM++LLGRAG LQEA L++ MPFE ++ +WG
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL + + +V+L E A + L LEP N G Y +LSNIYA G W E IR M +G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+KK PGCS+I+V RV+ +AGD SHP D++ + + +I+ +M+ + H N
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPN 672
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNA-RALFELMT---EKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
+ ++ YA+ G L R L E+ + E N++SW +++G+ + EA+ +F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--- 125
PD++ + + L + + +G IH Y+ + GL + +A+IDMY KSG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 126 ----------------------------IGKALQVFENMKNKS----VITWTTMIAGLAL 153
+ KAL++FE K ++ V++WT++IAG A
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+G EAL++F M+ A VKPN +T ++L AC ++ + GR R + +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF-AVRVHLLDNVH 424
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G + ++ + MP + N W SL+ +++G
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 87/171 (50%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A Y+ N+A + + + + + S+++LI + ++I +F RM + PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ CA+L A ++G+ IH GL+ + ++ MY + G++G A +VF+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M +K V+T + ++ A G E + + S ME + ++ N +++ ILS
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 229/357 (64%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
NT++ YAK G+++ +R +F+ M EK+V+SW ++IA YAQ +A +F M +
Sbjct: 231 NTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGG 290
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E+ + L ACA GA+ +G +H+ + + G V + ++IDMY K G+ A
Sbjct: 291 KYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARN 350
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ MK K+V +WT MIAG +HG REALD+F +M A VKPN ITFI++L+AC H G
Sbjct: 351 AFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGF 410
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G R+FN M Y +EP +E YGCM+DLLGRAGY++EA L++ M + +WGSLL
Sbjct: 411 LEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLL 470
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA I+ DVEL E + + L KL+P N G Y +L+NIYA GRW + ++R +++D G+ K
Sbjct: 471 AACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVK 530
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S +E+ RVH F+ GD HP +++Y+ L +++ +++ A ++ N S + + D
Sbjct: 531 PPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVD 587
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 138/256 (53%), Gaps = 12/256 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
+ ++ Y+K G L+NAR LF+ + +N+++WT+LI GY Q D +EA+ +F+ E
Sbjct: 121 SALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSE 180
Query: 71 -------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
D +AM++ LSAC+++ + E +H + GL+ ++ + N L+D YAK
Sbjct: 181 GNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKC 240
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAI 182
G++ + +VF++M K V++W +MIA A +GL +A ++F M +A K NE+T +
Sbjct: 241 GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTL 300
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H G + +G + + + G + +ID+ + G + A M E
Sbjct: 301 LLACAHEGALRVGMCLHDQV-IKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMK-EK 358
Query: 243 NAAIWGSLLAASNIYG 258
N W +++A ++G
Sbjct: 359 NVRSWTAMIAGYGMHG 374
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 12/237 (5%)
Query: 26 NNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
N LF + +V SW +LIA A+ E++ F M+ ++KP+ A+ +
Sbjct: 32 TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKS 91
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C+ L + G+ H +G + + +++ALIDMY+K GK+ A +F+ + ++++TW
Sbjct: 92 CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151
Query: 145 TTMIAGLALHGLGREALDMFSRM---------ERARVKPNEITFIAILSACCHVGLVELG 195
T++I G + EAL +F E + + I++LSAC V +
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + G++ + ++D + G + + K+ M E + W S++A
Sbjct: 212 EGVHGV-AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA-EKDVVSWNSMIA 266
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 215/347 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q E + LF M
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A LS CA + A+E G +H + + G + NAL+ MY K G + A
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M+ + V++W TMIAG A HG G+EAL++F M KP++IT + +L+AC H GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W ++ K+R +M + GVKK
Sbjct: 560 GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKK 619
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A ++
Sbjct: 620 VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVS 666
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GYA+ GD+ AR LF+ ++V +WT +++GYAQ EA +F M N
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA 286
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A ++A Q ++ + + N + + + N ++ YA++G + +A
Sbjct: 287 ----VSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKA 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K ++W M+A + G E L +F M R N F +LS C +
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAA 245
+E G + + ++++ YG+ GC + + + G +++A M E +
Sbjct: 399 LECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVV 450
Query: 246 IWGSLLAASNIYG 258
W +++A +G
Sbjct: 451 SWNTMIAGYARHG 463
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 57/262 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + G + AR LF TE +VISW L++GY Q + +EA LF RM +V
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV 224
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N ++ YA+ G + +A +
Sbjct: 225 V----------------------SW-----------------NIMVSGYARRGDMVEARR 245
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + V TWT +++G A +G+ EA +F M + N +++ A+++A +
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRM 301
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + FN+M R + + M+ +AG L+EA+ + MP + +A W ++L
Sbjct: 302 MDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAML 355
Query: 252 AASNIYGD--------VELGEC 265
AA + G +E+G C
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRC 377
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVE 261
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 215/347 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q E + LF M
Sbjct: 195 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 254
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A LS CA + A+E G +H + + G + NAL+ MY K G + A
Sbjct: 255 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 314
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M+ + V++W TMIAG A HG G+EAL++F M KP++IT + +L+AC H GL
Sbjct: 315 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 374
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL
Sbjct: 375 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W ++ K+R +M + GVKK
Sbjct: 435 GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKK 494
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A ++
Sbjct: 495 VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVS 541
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GYA+ GD+ AR LF+ ++V +WT +++GYAQ EA +F M N
Sbjct: 102 WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA 161
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A ++A Q ++ + + N + + + N ++ YA++G + +A
Sbjct: 162 ----VSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKA 213
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K ++W M+A + G E L +F M R N F +LS C +
Sbjct: 214 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 273
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAA 245
+E G + + ++++ YG+ GC + + + G +++A M E +
Sbjct: 274 LECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVV 325
Query: 246 IWGSLLAASNIYG 258
W +++A +G
Sbjct: 326 SWNTMIAGYARHG 338
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 57/263 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + G + AR LF TE +VISW L++GY Q + +EA LF RM +V
Sbjct: 40 WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV 99
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N ++ YA+ G + +A +
Sbjct: 100 V----------------------SW-----------------NIMVSGYARRGDMVEARR 120
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + V TWT +++G A +G+ EA +F M + N +++ A+++A +
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRM 176
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + FN+M R + + M+ +AG L+EA+ + MP + +A W ++L
Sbjct: 177 MDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAML 230
Query: 252 AASNIYGD--------VELGECA 266
AA + G +E+G C
Sbjct: 231 AAYSQGGCSEETLQLFIEMGRCG 253
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 223/346 (64%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD+ AR +F+ M + V+S+ +I + P EA+ LFR MQ + +KP
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA+ELG WIH+YI + L+++V +N ALIDMYAK G + A+ VF
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
++M+++ W+ M+ A HG GREA+ MF M++ +KP+++TF+ +L AC H G+V
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YF+ M+ YGI I+ YGC+ DLL R+G L+ A K + +P + A +W +LL+A
Sbjct: 358 EGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+GDV++G+ + +++L+ + G+Y I SN+ A GRW E +RK+M + GV K+P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IE+ VHEF AGD SHP +++ ++ Q+K ++ N
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPN 522
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 2/197 (1%)
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F RM E V PD ++ L ACA A E G H + G + LI+MYA
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
+ G + A +F+ M + V+++ MI L EAL +F M+ +KP +T I+
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+LSAC +G +ELGR + ++ + ++ ++ +ID+ + G L++A + + M
Sbjct: 245 VLSACALLGALELGRWIHDYIR-KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 242 ANAAIWGSLLAASNIYG 258
A W ++ A +G
Sbjct: 304 DKQA-WSVMMVAYANHG 319
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ YAK G L +A +F+ M ++ +W+ ++ YA EAI++F M+
Sbjct: 273 LVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMK 332
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ +KPD++ L L AC+ G V G + + +YG+ + + + D+ A+SG++
Sbjct: 333 KQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLE 392
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHG 155
+A + + + K + I W T+++ A HG
Sbjct: 393 RAYKFIDELPIKPTAILWRTLLSACAGHG 421
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 215/347 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q E + LF M
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A LS CA + A+E G +H + + G + NAL+ MY K G + A
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE M+ + V++W TMIAG A HG G+EAL++F M KP++IT + +L+AC H GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W ++ K+R +M + GVKK
Sbjct: 560 GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKK 619
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A ++
Sbjct: 620 VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVS 666
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN MV+GYA+ GD+ AR LF+ ++V +WT +++GYAQ EA +F M N
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA 286
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A ++A Q ++ + + N + + + N ++ YA++G + +A
Sbjct: 287 ----VSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKA 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M K ++W M+A + G E L +F M R N F +LS C +
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAA 245
+E G + + ++++ YG+ GC + + + G +++A M E +
Sbjct: 399 LECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVV 450
Query: 246 IWGSLLAASNIYG 258
W +++A +G
Sbjct: 451 SWNTMIAGYARHG 463
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 57/262 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A Y + G + AR LF TE + ISW L++GY Q + +EA LF RM +V
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDV 224
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N ++ YA+ G + +A +
Sbjct: 225 V----------------------SW-----------------NIMVSGYARRGDMVEARR 245
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ + V TWT +++G A +G+ EA +F M + N +++ A+++A +
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRM 301
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + FN+M R + + M+ +AG L+EA+ + MP + +A W ++L
Sbjct: 302 MDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAML 355
Query: 252 AASNIYGD--------VELGEC 265
AA + G +E+G C
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRC 377
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVE 261
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 210/334 (62%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR +F+ M K+ ++W ++ GYA P EA+ LF MQ E +KPD A+
Sbjct: 217 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 276
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG ++ L ALIDMYAK G +A VF+ M+
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 336
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +I W MI GL + G + A + +ME++ VK N+ TFI +L +C H GL++ GRRY
Sbjct: 337 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 396
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGCM+DLL RAG LQEA +L+ MP ANA I G+LL I+
Sbjct: 397 FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 456
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ EL E L+ LI LEP NSGNY +LSNIY+ GRW ++ K+R M+ GV+K+P CS++
Sbjct: 457 NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 516
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 517 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 550
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G L+ A+ +F+ M + + WT LI Y EA+ + R ++
Sbjct: 110 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA++ + GE + EQ G+ V + A +D+Y K G++ KA +V
Sbjct: 170 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 229
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K + W M+ G A +G REALD+F M+ +KP+ LSAC +G +
Sbjct: 230 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 289
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ ++ ++ + +ID+ + G EA + ++M + + +W +++
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMIL 347
Query: 253 ASNIYG 258
+ G
Sbjct: 348 GLGMTG 353
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 217/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G+ A+ +F+ M E+NV +WT +I+G AQ +EA +LF +M E +
Sbjct: 474 NALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIV 533
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ LSACA GA+E + +H++ GL + + + NAL+ MYAK G + A +V
Sbjct: 534 PDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRV 593
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M + V +WT MI GLA HG G +ALD+F +M+ KPN +F+A+LSAC H GLV
Sbjct: 594 FDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLV 653
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR F + YGIEP +E Y CM+DLLGRAG L+EA+ + MP E A WG+LL
Sbjct: 654 DEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLG 713
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A YG++E+ E A + +KL+P ++ Y +LSNIYA G W + +R +M+ G++K
Sbjct: 714 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKE 773
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV ++H FV GDTSHP+ +Y L + ++K
Sbjct: 774 PGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLK 813
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 148/303 (48%), Gaps = 11/303 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y K G +++A+ +F+ M E+NVISWT +I G A + EA F +MQ E
Sbjct: 69 TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L+A A GA+E + +H++ GL + + NAL+ MYAKSG I A V
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL--SACCHVG 190
F+ M + + +WT MI GLA HG G+EA +F +MER PN T+++IL SA G
Sbjct: 189 FDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTG 248
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E + + G + +I + + G + +A + M + + W ++
Sbjct: 249 ALEWVKEVHK-HAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC-DRDVISWNAM 306
Query: 251 LAASNIYGDVELGECALQHLIKLEPH----NSGNYAILSNIYAILGRWNESGKIRKVMRD 306
+ G G A +K++ +S Y L N + G W ++ K +
Sbjct: 307 IGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363
Query: 307 MGV 309
+G+
Sbjct: 364 VGL 366
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 139/272 (51%), Gaps = 11/272 (4%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y + G +++A+ +F+ + +NV +W +I G AQ EA++LF +M+ E PD
Sbjct: 380 YIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTF 439
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSA A+E + +H+Y GL + + NAL+ MYAK G A QVF++M
Sbjct: 440 VNILSANVGEEALEWVKEVHSYAIDAGLVDL-RVGNALVHMYAKCGNTMYAKQVFDDMVE 498
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++V TWT MI+GLA HG G EA +F +M R + P+ T+++ILSAC G +E +
Sbjct: 499 RNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 558
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G+ + ++ + + G + +A ++ M E + W ++ +G
Sbjct: 559 HS-HAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616
Query: 259 DVELGECALQHLIKL-----EPHNSGNYAILS 285
G AL +K+ +P+ A+LS
Sbjct: 617 R---GLDALDLFVKMKLEGFKPNGYSFVAVLS 645
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK G +++AR +F+ M E+++ SWT +I G AQ + EA +LF +M+
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL 229
Query: 73 PDEIAMLAALSACA--QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ L+ L+A A GA+E + +H + + G + + + NALI MYAK G I A
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDAR 289
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ M ++ VI+W MI GLA +G G EA +F +M++ P+ T++++L+ G
Sbjct: 290 LVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG 349
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
E + G+ + + + R G + +A+ + ++ N W ++
Sbjct: 350 AWEWVKEVHK-HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAM 407
Query: 251 LAA 253
+
Sbjct: 408 IGG 410
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 44/332 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G +++AR +F+ M +++VISW +I G AQ +EA T+F +MQ E
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L+ L+ GA E + +H + + GL + + + +A + MY + G I A +
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLI 392
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA------- 185
F+ + ++V TW MI G+A GREAL +F +M R P+ TF+ ILSA
Sbjct: 393 FDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEAL 452
Query: 186 ---------CCHVGLVELGRRYFNIMKSRYG---------------IEPKIEQYGCMIDL 221
GLV+L R N + Y +E + + MI
Sbjct: 453 EWVKEVHSYAIDAGLVDL--RVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG 510
Query: 222 LGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECALQHLIK---LEP 275
L + G EA L +M E +A + S+L+A G +E + H + +
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570
Query: 276 HNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GN L ++YA G +++ R+V DM
Sbjct: 571 LRVGN--ALVHMYAKCGSVDDA---RRVFDDM 597
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
+I GYA+ +A+ ++ +M+ E +P+EI L+ L AC +++ G+ IH +I Q G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
+ V + AL++MY K G I A +F+ M ++VI+WT MI GLA +G G+EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 166 RMERARVKPNEITFIAILSACCHVGLVE 193
+M+R PN T+++IL+A G +E
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALE 148
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSR 205
MI G A +G +A+ ++S+M R +PNEIT+++IL ACC ++ G++ + +I++S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
+ + ++E ++++ + G + +A+ + +M E N W ++ YG G+
Sbjct: 61 FQSDVRVET--ALVNMYVKCGSIDDAQLIFDKM-VERNVISWTVMIGGLAHYGR---GQE 114
Query: 266 ALQHLIKLEPH----NSGNYAILSNIYAILG 292
A ++++ NS Y + N A G
Sbjct: 115 AFHRFLQMQREGFIPNSYTYVSILNANASAG 145
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 223/346 (64%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD+ AR +F+ M + V+S+ +I + P EA+ LFR MQ + +KP
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA+ELG WIH+YI + L+++V +N ALIDMYAK G + A+ VF
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
++M+++ W+ M+ A HG GREA+ MF M++ +KP+++TF+ +L AC H G+V
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YF+ M+ YGI I+ YGC+ DLL R+G L+ A K + +P + A +W +LL+A
Sbjct: 358 EGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+GDV++G+ + +++L+ + G+Y I SN+ A GRW E +RK+M + GV K+P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IE+ VHEF AGD SHP +++ ++ Q+K ++ N
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPN 522
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 25 LNNARALFELMTEKNVISW-TTLIAGYAQMDQ----PNEAITLFRRMQVENVKPDEIAML 79
L AR +F+ + + W TL+ GYA+ EA +F RM E V PD +
Sbjct: 83 LAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFV 142
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L ACA A E G H + G + LI+MYA+ G + A +F+ M +
Sbjct: 143 SLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGE 202
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V+++ MI L EAL +F M+ +KP +T I++LSAC +G +ELGR
Sbjct: 203 CVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIH 262
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ ++ + ++ ++ +ID+ + G L++A + + M A W ++ A +G
Sbjct: 263 DYIR-KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA-WSVMMVAYANHG 319
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ YAK G L +A +F+ M ++ +W+ ++ YA EAI++F M+
Sbjct: 273 LVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMK 332
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ +KPD++ L L AC+ G V G + + +YG+ + + + D+ A+SG++
Sbjct: 333 KQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLE 392
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHG 155
+A + + + K + I W T+++ A HG
Sbjct: 393 RAYKFIDELPIKPTAILWRTLLSACAGHG 421
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 211/299 (70%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN M+ GY ++G+L AR LF+ M +++V+SW +IAGYAQ EA+ +FR MQ+
Sbjct: 172 LWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAE 231
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P+ + +++ L A ++LGA+ELG+W+H Y + + L +ALIDMYAK G I KAL
Sbjct: 232 VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKAL 291
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
QVFE + ++V+TW+T+IAGLA+HG ++ LD F MERA V P+++T+I +LSAC H G
Sbjct: 292 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 351
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR +F+ M G+EP+IE YGCM+DLLGRAG L+E+E+L+ MP + + IW +L
Sbjct: 352 LVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKAL 411
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L A ++G+VE+G+ +HL++L PH+SG+Y LSNIYA LG W K+R +M++M V
Sbjct: 412 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV 470
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 51/283 (18%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAA 81
DL+ AR +F M N S+ TLI ++ + P +A+ +F M VE+ V+P+ +
Sbjct: 37 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSV 95
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTI-------------------------------- 109
AC + + G +H ++GL++
Sbjct: 96 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 155
Query: 110 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
V L N +ID Y + G++ A +F+ M +SV++W MIAG A G
Sbjct: 156 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 215
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
+EA+++F M+ A V PN +T +++L A +G +ELG ++ ++ R I
Sbjct: 216 HFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLG 274
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +++A ++ +P + N W +++A ++G
Sbjct: 275 SALIDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHG 316
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 225/344 (65%), Gaps = 2/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE--N 70
N ++ Y G L+ + LF+ M +++ISW++LI+ +A+ P+EA+TLF++MQ++ +
Sbjct: 132 NALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESD 191
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD + ML+ +SA + LGA+ELG W+H +I + G+N V L +ALIDMY++ G I +++
Sbjct: 192 ILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSV 251
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M +++V+TWT +I GLA+HG GREAL+ F M + +KP+ I F+ +L AC H G
Sbjct: 252 KVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGG 311
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GRR F+ M S YGIEP +E YGCM+DLLGRAG + EA + M N+ IW +L
Sbjct: 312 LVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTL 371
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + + L E A + + +L+PH+ G+Y +LSN Y +G W + +R MR+ +
Sbjct: 372 LGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIV 431
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K PG S + + + HEFV+GD SHP ++ + + L + +K
Sbjct: 432 KEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLG 475
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 9/211 (4%)
Query: 50 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 109
+ + P+ A+ LF M NV D L + ++L IH + + G ++
Sbjct: 73 HVALHAPSLALALFSHMHRTNVPFDHFTFPLILKS-SKLNP----HCIHTLVLKLGFHSN 127
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME- 168
+ + NALI+ Y SG + +L++F+ M + +I+W+++I+ A GL EAL +F +M+
Sbjct: 128 IYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQL 187
Query: 169 -RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ + P+ + ++++SA +G +ELG + + SR G+ + +ID+ R G
Sbjct: 188 KESDILPDGVVMLSVISAVSSLGALELG-IWVHAFISRIGVNLTVSLGSALIDMYSRCGD 246
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + K+ MP N W +L+ ++G
Sbjct: 247 IDRSVKVFDEMPHR-NVVTWTALINGLAVHG 276
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 203/309 (65%), Gaps = 1/309 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAK G++ +AR LF+ + +++V++W +IAGY +A+ +F M+
Sbjct: 213 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE 272
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKAL 130
PDE+ ML+ LSAC LG ++ G+ IH I + G + V L NALIDMYAK G I +AL
Sbjct: 273 LPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL 332
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M+ K V TW +++ GLA HG +++ +F+ M + +++P+EITF+ +L AC H G
Sbjct: 333 EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAG 392
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE GR+YF++M+ Y IEP I YGCM+DLLGRAG L EA + M E NA +W +L
Sbjct: 393 RVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTL 452
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G+VELG A L+K+ SG+Y +LSNIYA G W+ K+RK+M D GV+
Sbjct: 453 LGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVR 512
Query: 311 KMPGCSYIE 319
K GCS IE
Sbjct: 513 KEAGCSLIE 521
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 63/301 (20%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + A LF +TE + W T+I G AQ P AI+L+ +M+ V+PD+ L
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI-------DM---------------- 119
AC +L V++G +H + + G + + N LI D+
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 120 --------YAKSGKIGKALQVFENM-------------------------------KNKS 140
YA+ G++G A Q+F+ M +
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
V+TW MIAG L G ++AL+MF M P+E+T +++LSAC +G ++ G+R
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 300
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
+ + + +ID+ + G + A ++ + M E + + W S+L +G
Sbjct: 301 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHA 359
Query: 261 E 261
E
Sbjct: 360 E 360
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI--DMYAK 122
R ++ + P +C +G ++ IH + G N+ LI A
Sbjct: 3 RKRLTDKSPSRQQRSQLWRSCTTIGTLK---QIHASMIVKGFNSNTSALRELIYASSIAI 59
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A Q+F ++ W TMI G A A+ ++S+ME V+P++ TF +
Sbjct: 60 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFV 119
Query: 183 LSACCHVGLVELG 195
L AC + V++G
Sbjct: 120 LKACTRLCWVKMG 132
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 212/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G + +AR +F+ M+ ++V+SW+ +I Y + EA F M+ NV+
Sbjct: 403 TALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVE 462
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+AC LGA++LG I+ + L + +P+ NALI+M K G I +A +
Sbjct: 463 PDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYI 522
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FENM + V+TW MI G +LHG REALD+F RM + R +PN +TF+ +LSAC G V
Sbjct: 523 FENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFV 582
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR+F+ + GI P +E YGCM+DLLGRAG L EAE L+ RMP + N++IW +LLA
Sbjct: 583 EEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A IYG++++ E A + + EP++ Y LS++YA G W K+RKVM GV+K
Sbjct: 643 ACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKE 702
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GC++IEV ++H FV D SHP +Y L ++ +K
Sbjct: 703 QGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIK 742
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 33/286 (11%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y G + AR +F+ M ++V+SWT +I GYA+ +A LF MQ E ++PD I
Sbjct: 308 YMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITY 367
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ ++ACA + L IH+ + + G T + ++ AL+ MYAK G I A QVF+ M
Sbjct: 368 IHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSR 427
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ V++W+ MI +G G EA + F M+R V+P+ +T+I +L+AC H+G ++LG
Sbjct: 428 RDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEI 487
Query: 199 F--------------------------NIMKSRYGIEPKIEQ----YGCMIDLLGRAGYL 228
+ +I ++RY E +++ + MI G
Sbjct: 488 YTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNA 547
Query: 229 QEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLI 271
+EA L RM F N+ + +L+A + G VE G +L+
Sbjct: 548 REALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL 593
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 9 YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++ +V+ Y K G ++ AR +F+ + +++V ++ +I GYA+ +A LF RMQ
Sbjct: 197 FRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQ 256
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
E KP+ I+ L+ L C+ A+ G+ +H GL V + ALI MY G I
Sbjct: 257 EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +VF+ MK + V++WT MI G A + +A +F+ M+ ++P+ IT+I I++AC
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ L R + ++++ +G + ++ ++ + + G +++A ++ M + W
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDT--ALVHMYAKCGAIKDARQVFDAMS-RRDVVSW 433
Query: 248 GSLLAASNIYGDVELGECALQ--HLIK---LEP 275
+++ A Y + GE A + HL+K +EP
Sbjct: 434 SAMIGA---YVENGCGEEAFETFHLMKRNNVEP 463
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 98/174 (56%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ ++ G++ AR F+ + K V++W +IAGYAQ+ EA LFR+M E ++
Sbjct: 100 NTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P I L L AC+ ++LG+ H + + G + + AL+ MY K G + A QV
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
F+ + + V T+ MI G A G G +A +F RM++ KPN I+F++IL C
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGC 273
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%)
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C L LG+ + ++I Q G + N LI +++ G + +A Q F++++NK+V+TW
Sbjct: 71 CMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTW 130
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+IAG A G +EA +F +M ++P+ ITF+ +L AC ++LG+ +
Sbjct: 131 NAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEF 184
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 223/346 (64%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD+ AR +F+ M + V+S+ +I + P EA+ LFR MQ + +KP
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA+ELG WIH+YI + L+++V +N ALIDMYAK G + A+ VF
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
++M+++ W+ M+ A HG GREA+ MF M++ +KP+++TF+ +L AC H G+V
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YF+ M+ YGI I+ YGC+ DLL R+G L+ A K + +P + A +W +LL+A
Sbjct: 358 EGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+GDV++G+ + +++L+ + G+Y I SN+ A GRW E +RK+M + GV K+P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IE+ VHEF AGD SHP +++ ++ Q+K ++ N
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPN 522
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 2/197 (1%)
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F RM E V PD ++ L ACA A E G H + G + LI+MYA
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
+ G + A +F+ M + V+++ MI L EAL +F M+ +KP +T I+
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+LSAC +G +ELGR + ++ + ++ ++ +ID+ + G L++A + + M
Sbjct: 245 VLSACALLGALELGRWIHDYIR-KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 242 ANAAIWGSLLAASNIYG 258
A W ++ A +G
Sbjct: 304 DKQA-WSVMMVAYANHG 319
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ YAK G L +A +F+ M ++ +W+ ++ YA EAI++F M+
Sbjct: 273 LVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMK 332
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ +KPD++ L L AC+ G V G + + +YG+ + + + D+ A+SG++
Sbjct: 333 KQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLE 392
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHG 155
+A + + + K + I W T+++ A HG
Sbjct: 393 RAYKFIDELPIKPTAILWRTLLSACAGHG 421
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 212/337 (62%), Gaps = 1/337 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V+ YAK G + AR +F M E+NV+ WT++IAG Q + EA+ LFR MQ+ VK
Sbjct: 235 SSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVK 294
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + +S+C Q+GA++LG ++H Y + +GL + + N+LIDMY+K G + KA Q+
Sbjct: 295 ADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQI 354
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F + + V TWT MI G A++GL EALD+F++ME +V PNE+ F+ +L+AC H GL
Sbjct: 355 FHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGL 414
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +F+ M Y + P+IE YGCM+DLLGRA L EAE+ ++ MP + +W SLL
Sbjct: 415 VEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLL 474
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A G V L E A + + +LEP G + +LSN+YA RW + +R M + K
Sbjct: 475 FACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSK 534
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PGCS+IEV +HEF AGD SH + + + L IN
Sbjct: 535 KPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGIN 571
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 38 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
+V+SW T+IAGY + PN+A+ F +M E V+ DE+ +L L ACA+ GA+++G
Sbjct: 159 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 218
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H + G + ++L+ MYAK G + +A +VF M ++V+ WT+MIAG G
Sbjct: 219 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 278
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
+EA+D+F M+ A VK ++ T ++S+C +G ++LG RY + +G+ ++
Sbjct: 279 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLG-RYLHAYCDGHGLGKELSVKNS 337
Query: 218 MIDLLGRAGYLQEAEKLLR 236
+ID+ + G + +A ++
Sbjct: 338 LIDMYSKCGDVNKAYQIFH 356
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 225/348 (64%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G++ AR +F+ + +K++++W +I GYAQ NEAI+LF M++ ++
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + LSAC+ +GA+ELG + Y + GL + V + AL+DMYAK G + KA++V
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F M K+V +W +I GLA +G G EA+ F M +KP++ITFI +LSAC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+R+FN + + I PKIE Y CM+DLL R+G+L+EA + ++P + +A + G+LL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+GE + +I+LEP NS NY + S IYA R ++S K+R +MR+ GV K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++EVS +V EF AGD D +YQ+L + +M+ ++ N
Sbjct: 593 TPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPN 640
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
++++ Y+ + D AR +F+ + ++V+SW ++ Y ++ E +FR M E V
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ + + + +AL+ MY K G+I +A +
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + +K ++ W MI G A +G+ EA+ +F M A ++P++IT +LSAC VG
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG + SR G+ + ++D+ + G L +A ++ R+MP + N A W +L+
Sbjct: 371 LELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-NVASWNALI 428
Query: 252 AASNIYGDVELGECALQHL 270
G G+ A+QH
Sbjct: 429 CGLAFNGR---GDEAIQHF 444
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+P+ ++ LF M ++PD + L A A+ A L H + + GLN +
Sbjct: 132 RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVH 191
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVK 173
+LI MY+ G A +VF+ + + V++W M+ G+ E MF M + V
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVA 251
Query: 174 PNEITFIAILSACCHVGLVELGR 196
PN +T +L+AC G + LGR
Sbjct: 252 PNVVTVAVVLAACRDQGDLVLGR 274
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 225/348 (64%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G++ AR +F+ + +K++++W +I GYAQ NEAI+LF M++ ++
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + LSAC+ +GA+ELG + Y + GL + V + AL+DMYAK G + KA++V
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F M K+V +W +I GLA +G G EA+ F M +KP++ITFI +LSAC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+R+FN + + I PKIE Y CM+DLL R+G+L+EA + ++P + +A + G+LL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+GE + +I+LEP NS NY + S IYA R ++S K+R +MR+ GV K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++EVS +V EF AGD D +YQ+L + +M+ ++ N
Sbjct: 593 TPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPN 640
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
++++ Y+ + D AR +F+ + ++V+SW ++ Y ++ E +FR M E V
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ + + + +AL+ MY K G+I +A +
Sbjct: 251 APNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + +K ++ W MI G A +G+ EA+ +F M A ++P++IT +LSAC VG
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG + SR G+ + ++D+ + G L +A ++ R+MP + N A W +L+
Sbjct: 371 LELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-NVASWNALI 428
Query: 252 AASNIYGDVELGECALQHL 270
G G+ A+QH
Sbjct: 429 CGLAFNGR---GDEAIQHF 444
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+P+ ++ LF M ++PD + L A A+ A L H + + GLN +
Sbjct: 132 RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVH 191
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVK 173
+LI MY+ G A +VF+ + + V++W M+ G+ E MF M + V
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVA 251
Query: 174 PNEITFIAILSACCHVGLVELGR 196
PN +T +L+AC G + LGR
Sbjct: 252 PNAVTVAVVLAACRDQGDLVLGR 274
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 212/337 (62%), Gaps = 1/337 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V+ YAK G + AR +F M E+NV+ WT++IAG Q + EA+ LFR MQ+ VK
Sbjct: 147 SSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVK 206
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + +S+C Q+GA++LG ++H Y + +GL + + N+LIDMY+K G + KA Q+
Sbjct: 207 ADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQI 266
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGL 191
F + + V TWT MI G A++GL EALD+F++ME +V PNE+ F+ +L+AC H GL
Sbjct: 267 FHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGL 326
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +F+ M Y + P+IE YGCM+DLLGRA L EAE+ ++ MP + +W SLL
Sbjct: 327 VEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLL 386
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A G V L E A + + +LEP G + +LSN+YA RW + +R M + K
Sbjct: 387 FACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSK 446
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PGCS+IEV +HEF AGD SH + + + L IN
Sbjct: 447 KPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGIN 483
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 38 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
+V+SW T+IAGY + PN+A+ F +M E V+ DE+ +L L ACA+ GA+++G
Sbjct: 71 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 130
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H + G + ++L+ MYAK G + +A +VF M ++V+ WT+MIAG G
Sbjct: 131 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 190
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
+EA+D+F M+ A VK ++ T ++S+C +G ++LG RY + +G+ ++
Sbjct: 191 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLG-RYLHAYCDGHGLGKELSVKNS 249
Query: 218 MIDLLGRAGYLQEAEKLLR 236
+ID+ + G + +A ++
Sbjct: 250 LIDMYSKCGDVNKAYQIFH 268
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 218/345 (63%), Gaps = 2/345 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++VA Y++ D+ +A +F L K++++WT ++ GYAQ P +A+ F +M +
Sbjct: 216 WTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAGM 275
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+++ A+SACAQLGAV WI ++ GL V + + L+DMYAK G I +A +
Sbjct: 276 PIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEACR 335
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VFE M+ K+V T+++MI GLA HG +A+ +F+ M RA V+PN +TFI +L+AC H G
Sbjct: 336 VFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAG 395
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ GR YF MK RYGI P + Y CM+DLLGRAG + EA L++ M E + +WG+L
Sbjct: 396 MVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGAL 455
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G+ ++ + A QHL KLEP GNY +LSN A G W+E K+RK+MR G+K
Sbjct: 456 LGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLK 515
Query: 311 KMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K P S E VH+F AGD +HP + + L ++ ++K A
Sbjct: 516 KDPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLELRARLKLA 560
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/346 (43%), Positives = 223/346 (64%), Gaps = 3/346 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W M+ GYAK G ++ AR+LF+ M E++V+++ ++ GY Q EA+ +F MQ + N
Sbjct: 292 WANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGN 351
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
D +L ALSA AQLG ++ G IH +IE+ G + L ALIDMY+K G I A+
Sbjct: 352 FLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAM 411
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFEN+K KSV W +I GLA+HGLG A D MER RV+P++ITFI +L+AC H G
Sbjct: 412 MVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAG 471
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G F +M+ + +EPK++ YGCM+D+LGRAG+++EA+ + MPFE N IW SL
Sbjct: 472 LVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSL 531
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A + +G+ ++L++L+ + +Y + SN+YA LG+WN+ K+R +M+ +K
Sbjct: 532 LSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLK 591
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
K+PGCS+IE+ V+ F D SHP F +Y IL ++ M +EH
Sbjct: 592 KIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSLS--MTDSEH 635
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFEL--MTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQV 68
+N+M+ GY K G ++ AR +F+ + E+N+ISW +LI GYAQ D A LF +M
Sbjct: 196 YNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMP- 254
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ D I+ + + C + G +E + + + + IV N +ID YAK+G++
Sbjct: 255 ---ERDLISWNSMIDGCVKCGRMEDAQGLFDRMPN---RDIVSWAN-MIDGYAKNGRVDI 307
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACC 187
A +F+ M + V+ + M+ G +G EAL +F M+ + T + LSA
Sbjct: 308 ARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIA 367
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYG---------CMIDLLGRAGYLQEAEKLLRRM 238
+G ++ G I IE+ G +ID+ + G ++ A + +
Sbjct: 368 QLGHIDKG----------VAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENI 417
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
E + W +++ I+G LGE A L+++E
Sbjct: 418 K-EKSVDHWNAIIGGLAIHG---LGELAFDFLMEME 449
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W +I Y+ P EA+ L M D+ + L AC+++G V+ G IH ++
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLK 154
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGRE 159
+ + + L N LI Y K G + +A QVF+ M + +++ +MI G G L R
Sbjct: 155 KLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARV 214
Query: 160 ALDMFSRMERARVKPNE---------------------------ITFIAILSACCHVGLV 192
D ER + N I++ +++ C G +
Sbjct: 215 VFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRM 274
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
E + F+ M +R I + MID + G + A L MP
Sbjct: 275 EDAQGLFDRMPNR-----DIVSWANMIDGYAKNGRVDIARSLFDEMP 316
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 220/333 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G + G++ A LF+ M+E++ ISWT++I G+ + +A+ FR MQ+ V
Sbjct: 161 WNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGV 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD + +++ L+ACA LGA+ LG WI+ ++ + + ++N+LIDMY++ G I A Q
Sbjct: 221 EPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQ 280
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M +S+++W +MI G AL+G EAL+ F+ M + +P+ ++F L+AC H GL
Sbjct: 281 VFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGL 340
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G ++F+IMK I P+IE YGC++DL RAG L++A ++ MP + N + GSLL
Sbjct: 341 VDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLL 400
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +GDV L E +++L +++P + NY +LSNIYA +GRW+ + K+RK M+ +G+ K
Sbjct: 401 AACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHK 460
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IE+ +HEFVAGD +H + +Y +L
Sbjct: 461 KPGFSSIEMDGSIHEFVAGDKTHVETQNIYAML 493
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 40 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ--LGAVELGEWI 97
++SWT+ IA + + Q EA F RMQ+ V+P+ I L LSAC L + G I
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 98 HNYIEQYGLNTI-VPLNNALIDMYAK-------------------------------SGK 125
H Y+ + GL+T V + AL+DMY+K +G+
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGE 173
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+G+A+ +F+ M + I+WT+MI G G +AL+ F M+ A V+P+ +T I++L+A
Sbjct: 174 VGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAA 233
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C ++G + LG + N + + I+ +ID+ R G ++ A ++ +MP + +
Sbjct: 234 CANLGALGLG-LWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP-KRSLV 291
Query: 246 IWGSLLAASNIYGDVE 261
W S++ + G E
Sbjct: 292 SWNSMIVGFALNGHAE 307
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 57/240 (23%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y++ G + AR +FE M +++++SW ++I G+A EA+ F M+ E
Sbjct: 260 KISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKE 319
Query: 70 NVKPDEIAMLAALSACAQLGAVELG----------EWIHNYIEQYGLNTIVPLNNALIDM 119
+PD ++ AL+AC+ G V+ G I IE YG L+D+
Sbjct: 320 GFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYG---------CLVDL 370
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y+++G++ AL V NM +KPNE+
Sbjct: 371 YSRAGRLEDALNVIANMP----------------------------------MKPNEVVL 396
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ-YGCMIDLLGRAGYLQEAEKLLRRM 238
++L+AC G V L R +MK ++P + Y + ++ G A K+ ++M
Sbjct: 397 GSLLAACRTHGDVGLAER---LMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKM 453
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 203/309 (65%), Gaps = 1/309 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAK G++ +AR LF+ + +++V++W +IAGY +A+ +F M+
Sbjct: 178 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKAL 130
PDE+ ML+ LSAC LG ++ G+ IH I + G + V L NALIDMYAK G I +AL
Sbjct: 238 LPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL 297
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M+ K V TW +++ GLA HG +++ +F+ M + +++P+EITF+ +L AC H G
Sbjct: 298 EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAG 357
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
VE GR+YF++M+ Y IEP I YGCM+DLLGRAG L EA + M E NA +W +L
Sbjct: 358 RVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTL 417
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G+VELG A L+K+ SG+Y +LSNIYA G W+ K+RK+M D GV+
Sbjct: 418 LGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVR 477
Query: 311 KMPGCSYIE 319
K GCS IE
Sbjct: 478 KEAGCSLIE 486
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 63/301 (20%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + A LF +TE + W T+I G AQ P AI+L+ +M+ V+PD+ L
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI-------DM---------------- 119
AC +L V++G +H + + G + + N LI D+
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 120 --------YAKSGKIGKALQVFENM-------------------------------KNKS 140
YA+ G++G A Q+F+ M +
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 205
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
V+TW MIAG L G ++AL+MF M P+E+T +++LSAC +G ++ G+R
Sbjct: 206 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 265
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
+ + + +ID+ + G + A ++ + M E + + W S+L +G
Sbjct: 266 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHA 324
Query: 261 E 261
E
Sbjct: 325 E 325
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
A SG + A Q+F ++ W TMI G A A+ ++S+ME V+P++ TF
Sbjct: 23 AISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFP 82
Query: 181 AILSACCHVGLVELG 195
+L AC + V++G
Sbjct: 83 FVLKACTRLCWVKMG 97
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 210/334 (62%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR +F+ M K+ ++W ++ GYA P EA+ LF MQ E +KPD A+
Sbjct: 672 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 731
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG ++ L ALIDMYAK G +A VF+ M+
Sbjct: 732 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 791
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +I W MI GL + G + A + +ME++ VK N+ TFI +L +C H GL++ GRRY
Sbjct: 792 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 851
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGCM+DLL RAG LQEA +L+ MP ANA I G+LL I+
Sbjct: 852 FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 911
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ EL E L+ LI LEP NSGNY +LSNIY+ GRW ++ K+R M+ GV+K+P CS++
Sbjct: 912 NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 971
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 972 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 1005
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G L+ A+ +F+ M + + WT LI Y EA+ + R ++
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 624
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA++ + GE + EQ G+ V + A +D+Y K G++ KA +V
Sbjct: 625 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 684
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K + W M+ G A +G REALD+F M+ +KP+ LSAC +G +
Sbjct: 685 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 744
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ ++ ++ + +ID+ + G EA + ++M + + +W +++
Sbjct: 745 DLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMIL 802
Query: 253 ASNIYG 258
+ G
Sbjct: 803 GLGMTG 808
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 224/344 (65%), Gaps = 4/344 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N + G ++ G + ++ LF + ++ NV+SWT++IA +Q + EA+ LFR MQ+
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQI 379
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
VKP+ + + L AC + A+ G+ H + + G++T V + +ALIDMYAK G+I
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ F+ + K+++ W +IAG A+HG +EA+++F M+R+ KP+ I+F +LSAC
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL E G YFN M S+YGIE ++E Y CM+ LL RAG L++A ++RRMP +A +WG
Sbjct: 500 SGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWG 559
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL++ ++ +V LGE A + L +LEP N GNY +LSNIYA G WNE ++R +M++ G
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++K PGCS+IEV +VH +AGD SHP ++ + L K++ +MK
Sbjct: 620 LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMK 663
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 41/286 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
W+ +VA YA+ G ++ A+ LF M + N+ISW +IAG+ +EA+ +F M
Sbjct: 183 WSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK----- 122
+ +PD + + L A L + +G IH Y+ + GL + +++ALIDMY K
Sbjct: 243 LRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTS 302
Query: 123 --------------------------SGKIGKALQVFENMKNK----SVITWTTMIAGLA 152
+G++ +L++F +K++ +V++WT+MIA +
Sbjct: 303 EMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCS 362
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G EAL++F M+ A VKPN +T +L AC ++ + G+ + R GI +
Sbjct: 363 QNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAA-HCFSLRRGISTDV 421
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +Q + +P + N W +++A ++G
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHG 466
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ YA +A + +L+ E NV S++TLI +++ Q + A++ F +M + PD
Sbjct: 54 LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPD 113
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ +A+ ACA L A++ +H G ++ + ++L+ MY K +I A +VF+
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M V++W+ ++A A G EA +FS M + V+PN I++ +++ H GL
Sbjct: 174 RMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSE 233
Query: 195 GRRYFNIMKSRYGIEP 210
F M R G EP
Sbjct: 234 AVLMFLDMHLR-GFEP 248
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H +I + GL L L+ YA + A V + + +V +++T+I +
Sbjct: 36 HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
AL FS+M + P+ + + AC + ++ R+ I S G +
Sbjct: 96 HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI-ASVSGFDSDSFVQSS 154
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ + + +++A ++ RM FE + W +L+AA G V+
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVD 197
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 221/338 (65%), Gaps = 3/338 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++ GY KVGD++ AR++F+ M EKN+++W+T+I GYA+ P ++ L++ + + +
Sbjct: 295 WVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGI 354
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE L +SAC+QLG + E + L + + +LIDMYAK G I +A+Q
Sbjct: 355 KPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQ 414
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + K + ++T+I A HGL +A+ +FS M++A +KP+ + F+ +L+AC H GL
Sbjct: 415 VFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGL 474
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRR F M YGI+P + Y CM+D+LGRAG L+EA L+ MP NA +WG+LL
Sbjct: 475 VGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALL 534
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ +V+L E A L ++EP+NSGNY +L NIYA G+W++ K+R ++R+ V+K
Sbjct: 535 SACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRK 594
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY---QILCK 346
G S+IE+ +HEFV GD SH D +R++ ++LCK
Sbjct: 595 NRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELLCK 632
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 36/253 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY G ++ AR LF+ M E+NVISWT++I GY + EA LF RM +++
Sbjct: 171 WNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDL 230
Query: 72 KPDEIAMLA---------------------------ALSACAQLGAVELGEWIHNYIEQY 104
++ + A +S C + G ++ + + +++
Sbjct: 231 ASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQER 290
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+ + V +ID Y K G + A VF+ M K+++ W+TMI G A G +L ++
Sbjct: 291 NVASWV----MIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLY 346
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--IEPKIEQYGCMIDLL 222
+ +KP+E + I+SAC +G+ + +++ G + P ++ +ID+
Sbjct: 347 KTFKEQGIKPDETFALGIISACSQLGVPDTAE---SVICDFVGPSLFPNLQVVTSLIDMY 403
Query: 223 GRAGYLQEAEKLL 235
+ G ++ A ++
Sbjct: 404 AKCGNIERAVQVF 416
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 36/325 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G ++ A LF+ E N WT LI G+ + +Q A F +M EN+
Sbjct: 40 NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + L A ++LG ++ G+ ++ + G + + N +I+++ + G++G A Q+
Sbjct: 100 PLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQM 159
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME---------------------RAR 171
F+ M+ + ++W +MI G +G A +F RME AR
Sbjct: 160 FDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEAR 219
Query: 172 V------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
V + + ++ ++SA VG + R F +M + + MI +A
Sbjct: 220 VLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIH-----DVGTWNLMISGCCKA 274
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 285
G + A++ RM E N A W ++ GDV+ ++ N ++ +
Sbjct: 275 GEMDAAKEFFDRMQ-ERNVASWVMIIDGYIKVGDVDAARSVFD---QMPEKNLVAWSTMI 330
Query: 286 NIYAILGRWNESGKIRKVMRDMGVK 310
YA G S K+ K ++ G+K
Sbjct: 331 GGYAKTGHPYSSLKLYKTFKEQGIK 355
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 224/344 (65%), Gaps = 4/344 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N + G ++ G + ++ LF + ++ NV+SWT++IA +Q + EA+ LFR MQ+
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
VKP+ + + L AC + A+ G+ H + + G++T V + +ALIDMYAK G+I
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ F+ + K+++ W +IAG A+HG +EA+++F M+R+ KP+ I+F +LSAC
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL E G YFN M S+YGIE ++E Y CM+ LL RAG L++A ++RRMP +A +WG
Sbjct: 500 SGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWG 559
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL++ ++ +V LGE A + L +LEP N GNY +LSNIYA G WNE ++R +M++ G
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++K PGCS+IEV +VH +AGD SHP ++ + L K++ +MK
Sbjct: 620 LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMK 663
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 41/286 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
W+ +VA YA+ G ++ A+ LF M + N+ISW +IAG+ +EA+ +F M
Sbjct: 183 WSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK----- 122
+ +PD + + L A L + +G IH Y+ + GL + +++ALIDMY K
Sbjct: 243 LRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTS 302
Query: 123 --------------------------SGKIGKALQVFENMKNK----SVITWTTMIAGLA 152
+G++ +L++F +K++ +V++WT+MIA +
Sbjct: 303 EMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCS 362
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G EAL++F M+ A VKPN +T +L AC ++ + G+ + R GI +
Sbjct: 363 QNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAA-HCFSLRRGISTDV 421
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G +Q + +P + N W +++A ++G
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHG 466
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ YA +A + +L+ E NV S++TLI +++ Q + A++ F +M + PD
Sbjct: 54 LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPD 113
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ +A+ ACA L A++ +H G ++ + ++L+ MY K +I A +VF+
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M V++W+ ++A A G EA +FS M + V+PN I++ +++ H GL
Sbjct: 174 RMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSE 233
Query: 195 GRRYFNIMKSRYGIEP 210
F M R G EP
Sbjct: 234 AVLMFLDMHLR-GFEP 248
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H +I + GL L L+ YA + A V + + +V +++T+I +
Sbjct: 36 HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
AL FS+M + P+ + + AC + ++ R+ I S G +
Sbjct: 96 HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI-ASVSGFDSDSFVQSS 154
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ + + +++A ++ RM FE + W +L+AA G V+
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVD 197
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 209/308 (67%), Gaps = 1/308 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ TM+ GYAK GD+ +AR +FE E++V++W+ LI+GY Q QPNEA+ +F M NV
Sbjct: 254 FTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNV 313
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKAL 130
KPDE M++ +SAC+Q+G++EL +W+ +Y+ + ++ + ALIDM AK G + +A
Sbjct: 314 KPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRAT 373
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++FE M + +I++ +M+ GL++HG G +A+ +FSRM + P+++ F IL+AC G
Sbjct: 374 KLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAG 433
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G YF MK+ Y I P + Y CM+DLLGRAG L+EA +LL+ MP E +A WG+L
Sbjct: 434 LVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGAL 493
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ D+ELGE L +LEP N+GNY +LSNIYA +W + +R MR+ G++
Sbjct: 494 LGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIR 553
Query: 311 KMPGCSYI 318
K+PGCS+I
Sbjct: 554 KIPGCSWI 561
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 13/248 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y K G++ AR +F+ M E+NV+SWT +IAGYA EA LF M +N
Sbjct: 162 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 221
Query: 73 PDEIAMLAALSACAQLGAVE--LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
A+++ C L + E H + + +ID YAKSG + A
Sbjct: 222 SWN-AIISGYVKCGDLRSARKMFDEMPHRNVVSF---------TTMIDGYAKSGDMASAR 271
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE + V+ W+ +I+G +G EA+ +F M VKP+E ++++SAC +G
Sbjct: 272 FVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMG 331
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+EL + + ++ + +ID+ + G + A KL MP + + + S+
Sbjct: 332 SLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMP-KRDLISYCSM 390
Query: 251 LAASNIYG 258
+ +I+G
Sbjct: 391 MQGLSIHG 398
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 80
+ + + ++F ++ + + W T I GY++ + ++LF RM+ + PD+ +
Sbjct: 69 SLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPS 128
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
+ AC+++ V+ G H + G+ V + +LID+Y K G+I A +VF+ M ++
Sbjct: 129 LIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERN 188
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
V++WT MIAG A EA +F M + N +++ AI+S G + R+ F+
Sbjct: 189 VVSWTAMIAGYASFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFD 244
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
M R + + MID ++G + A + P E + W +L++
Sbjct: 245 EMPHR-----NVVSFTTMIDGYAKSGDMASARFVFEEAP-ERDVVAWSALIS 290
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 210/334 (62%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR +F+ M K+ ++W ++ GYA P EA+ LF MQ E +KPD A+
Sbjct: 696 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 755
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
ALSAC +LGA++LG ++ L ALIDMYAK G +A VF+ M+
Sbjct: 756 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 815
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +I W MI GL + G + A + +ME++ VK N+ TFI +L +C H GL++ GRRY
Sbjct: 816 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 875
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGCM+DLL RAG LQEA +L+ MP ANA I G+LL I+
Sbjct: 876 FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 935
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ EL E L+ LI LEP NSGNY +LSNIY+ GRW ++ K+R M+ GV+K+P CS++
Sbjct: 936 NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 995
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 996 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 1029
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G L+ A+ +F+ M + + WT LI Y EA+ + R ++
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 648
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA++ + GE + EQ G+ V + A +D+Y K G++ KA +V
Sbjct: 649 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 708
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M++K + W M+ G A +G REALD+F M+ +KP+ LSAC +G +
Sbjct: 709 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 768
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ ++ ++ + +ID+ + G EA + ++M + + +W +++
Sbjct: 769 DLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMIL 826
Query: 253 ASNIYG 258
+ G
Sbjct: 827 GLGMTG 832
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 225/348 (64%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G++ AR +F+ + +K++++W +I GYAQ NEAI+LF M++ ++
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + LSAC+ +GA+ELG + Y + GL + V + AL+DMYAK G + KA++V
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F M K+V +W +I GLA +G G EA+ F M +KP++ITFI +LSAC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+R+FN + + I PKIE Y CM+DLL R+G+L+EA + ++P + +A + G+LL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+GE + +I+LEP NS NY + S IYA R ++S K+R +MR+ GV K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++EVS +V EF AGD D +YQ+L + +M+ ++ N
Sbjct: 593 TPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPN 640
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
++++ Y+ + D AR +F+ + ++V+SW ++ Y ++ E +FR M E V
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ + + + +AL+ MY K G+I +A +
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + +K ++ W MI G A +G+ EA+ +F M A ++P++IT +LSAC VG
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG + SR G+ + ++D+ + G L +A ++ R+MP + N A W +L+
Sbjct: 371 LELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-NVASWNALI 428
Query: 252 AASNIYGDVELGECALQHL 270
G G+ A+QH
Sbjct: 429 CGLAFNGR---GDEAIQHF 444
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+P+ ++ LF M ++PD + L A A+ A L H + + GLN +
Sbjct: 132 RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVH 191
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVK 173
+LI MY+ G A +VF+ + + V++W M+ G+ E MF M + V
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVA 251
Query: 174 PNEITFIAILSACCHVGLVELGR 196
PN +T +L+AC G + LGR
Sbjct: 252 PNVVTVAVVLAACRDQGDLVLGR 274
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 224/345 (64%), Gaps = 3/345 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VE 69
N+++ Y K G L AR LF+ M ++NV+ W +IAGYAQ ++ ++AI +FR MQ
Sbjct: 131 NSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFG 190
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V P+++ +++ L ACA LGA++LG+WI +I + + + L NAL DMYAK G I +A
Sbjct: 191 GVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEA 250
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF M+ + VI+W+ +I GLA++G EA F M KPN++ F+ +L+AC H
Sbjct: 251 RRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHA 310
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G FN M YG+ PK+E YGC++DLL RAG L +AE ++ MP + N IWG+
Sbjct: 311 GLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGA 370
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL IY D G+ +QH+++L+ +SG+Y L+N+Y+ +GR +++ K R MR+ GV
Sbjct: 371 LLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGV 430
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K PGCS+IEV VHEF GD SHP+ +++Y ++ ++ +MK A
Sbjct: 431 LKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLA 475
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-- 72
++ A ++ A +F + N+ + + AQ AI F QV +
Sbjct: 30 LIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNH-QVSSPNAP 88
Query: 73 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + L ACA L V G+ IH + + G + + + N+LIDMY K+G + A
Sbjct: 89 NPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARH 148
Query: 132 VFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCH 188
+F+ M ++++V+ W MIAG A + +A+++F M++ V PN++T +++L AC H
Sbjct: 149 LFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAH 208
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+G ++LG ++ + SR + + + D+ + G + EA ++ +M E + W
Sbjct: 209 LGALDLG-KWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKME-ERDVISWS 266
Query: 249 SLLAASNIYGDVE 261
++ +YG +
Sbjct: 267 IIICGLAMYGHAD 279
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 224/353 (63%), Gaps = 11/353 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NTM++G + G ++ A +F+ M + +SWT LI G+ + + +EAI FR M ++ V
Sbjct: 141 YNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGV 200
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D I ++A +SACA++GA+ LG W+H + + L V + N+LIDMYA+ G++ A Q
Sbjct: 201 ETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQ 260
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +++ ++V++W +MI G A +G +A+++F M R KP+ +T +L+AC H GL
Sbjct: 261 VFRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGL 320
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G RY+++M + YG+ ++E YGC++DLLGRAG L EA ++ MP N + G+LL
Sbjct: 321 TEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALL 380
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G++++ E +QHL +L+P NY +LSNIYA +G+W+ +GK+R +M+ GVKK
Sbjct: 381 AGCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKK 440
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL-----------CKINGQMKF 353
PG S +E+ VHEFV+GD SHP + Q+L C ++G F
Sbjct: 441 RPGHSTVEIDGDVHEFVSGDQSHPLAGEIGQMLGLLWHEMTRYGCDVHGGSSF 493
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 39/238 (16%)
Query: 38 KNVISWTTLIAGYA-QMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGE 95
++V+SWT+ I+ A Q D A +L + P+++ +L LSACA + L
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLAS 89
Query: 96 WIHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 151
+ + L + P L+ L Y S ALQ+F++M +SV+T+ TMI+GL
Sbjct: 90 PLALTLHARALK-LFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGL 148
Query: 152 ALHGL-----------------------------GR--EALDMFSRMERARVKPNEITFI 180
+GL GR EA+D F M V+ + IT +
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLV 208
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
A++SAC VG + LG + + + R +E + +ID+ R G + A ++ R +
Sbjct: 209 AVVSACAEVGALGLG-MWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSI 265
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 225/342 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ + +L + LF+ M +++V+SW ++I G+A++ Q EA+T F M+ V
Sbjct: 261 WNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + +L+ LSACA GA++ G WIH Y+++ +N L+++LIDMY+K G I KA+Q
Sbjct: 321 SPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQ 380
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE + + TWT+++ GLA+HG G +AL FS+M+ A+V+P+++T + +LSAC H GL
Sbjct: 381 IFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF M+ +G+ PK+E YG M+DLLGR G L+EA L+ MP EAN IWG+ L
Sbjct: 441 LDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFL 500
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ +VELGE A + L+ L P + +LSN+YA +W+ S +RK ++ G+KK
Sbjct: 501 SACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKK 560
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PGCS IEV+ VH F+ GD SHP + + ++ KI M+
Sbjct: 561 SPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMRL 602
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 44/291 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y G + R +F+ M + ++ WT +I Y + P +A+ LFR M+ + PD +A+
Sbjct: 136 YVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAV 195
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+SAC LG + + + +H +IE+ G+ +++ LI Y + G + A + F+
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 139 KSVITWTT-------------------------------MIAGLALHGLGREALDMFSRM 167
K+++ W T MI G A G +EAL F M
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM 315
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
E + V PN +T ++ LSAC G ++ G + + + + +ID+ + G
Sbjct: 316 EFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGD 374
Query: 228 LQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ +A E+ RR F W S++ ++G GE AL + K++
Sbjct: 375 IDKAVQIFEESTRRDLF-----TWTSIVCGLAMHGR---GEKALHYFSKMK 417
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEW 96
NV W T+I + L MQ ++P+ + L A V+ GE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + + G ++ AL+ Y G +GK QVF+ M+ ++ WT +I
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQY 215
+AL++F M + P+ + ++SAC +G +LG + + + GIE
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLG--DLGVAKAMHCFIEKSGIEVDAFVS 230
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+I G G L A + + P + N +W +++ S + ++ELG+ Q +
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSM 284
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 213/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY + L+ A +FE M KN +SW +++GY +A+ LF RM+ E+V
Sbjct: 367 WNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDV 426
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP + A+SAC +LG+++ G+ +H ++ Q G NALI MYA+ G + +A
Sbjct: 427 KPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANL 486
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M N ++W MI+ L HG GREAL++F RM + P+ I+F+ +L+AC H GL
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGL 546
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +YF MK +GI P + Y +IDLLGRAG + EA L++ MPFE +IW ++L
Sbjct: 547 VDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ GD+ELG A L K+ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 666
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE +VH FV GDT HP+ ++Y+ L + +M+
Sbjct: 667 EPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMR 707
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 160/345 (46%), Gaps = 51/345 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GY + GD+ AR++FE + K + W +I+GY EA LFRRM +E V
Sbjct: 231 WTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERV 290
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIG 127
DE + LSACA G G+ +H I + N + +P+NNAL+ +Y+K G I
Sbjct: 291 PLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIA 350
Query: 128 KALQVFENMKNKSVITWTT-------------------------------MIAGLALHGL 156
A ++F+NMK+K V++W T M++G G
Sbjct: 351 VARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGF 410
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL +F+RM VKP + T+ +SAC +G ++ G++ + + G E
Sbjct: 411 SEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHL-VQLGFEGSNSAGN 469
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
+I + R G ++EA + MP ++ W ++++A +G G AL+ ++
Sbjct: 470 ALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQHGH---GREALELFDRMV-- 523
Query: 277 NSGNYAILSNIYAILGRWNESGKI-------RKVMRDMGVKKMPG 314
G Y + +L N SG + + RD G+ +PG
Sbjct: 524 AEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGI--IPG 566
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 147/347 (42%), Gaps = 49/347 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
++VA YA G L A + F+ + + ++ + +I+ YA+ A+ +FR +
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEW--IHNYIEQYGLNTIVPLNNALIDMYAKSGKI- 126
+++PD+ + A LSA L + + + + + G ++ ++NAL+ +Y K +
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211
Query: 127 --GKALQVFENMKNKSVITWTT-------------------------------MIAGLAL 153
A +V + M +K +TWTT MI+G
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY---FNIMKSRYGIEP 210
G+ EA ++F RM RV +E TF ++LSAC + G G+ ++ + E
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ ++ L + G + A ++ M + W ++L+ Y + + A++
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMK-SKDVVSWNTILSG---YVESSCLDKAVEVF 387
Query: 271 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKP---CDY 431
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 233/365 (63%), Gaps = 6/365 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y G +A +F+ + E+N++SW +++ G+A +PNE +T+FR M
Sbjct: 161 NSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVE 220
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD +++ L+ACA++G + LG +H ++ + GL NALID+YAK G + A
Sbjct: 221 FAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDAR 280
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++F M ++V++WT++I GLA++G G +AL +FS MER ++ P EIT + +L AC H
Sbjct: 281 KMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHC 340
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G RYF+ MK+ YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +
Sbjct: 341 GLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRT 400
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +E+GE A L++L+P +SG+Y +LSN+YA +GRW + +RK M GV
Sbjct: 401 LLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGV 460
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLE 366
+K PG S +E+ V+EFV GD SHP+ D++Y++L I +++ + H N + + +
Sbjct: 461 RKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIED 520
Query: 367 SDVAS 371
+ S
Sbjct: 521 EEKES 525
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 34 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 93
L+ + S T++ +A +P A+ L RR PD L ACA+L A+
Sbjct: 84 LLPSPDPFSLNTVLRIFASSARPRVALALHRR---HLAPPDTHTYPPLLQACARLLALRY 140
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGL 151
GE +H + GL ++V + N+L+ +Y G A +VF+ + +++++W +++ G
Sbjct: 141 GEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGF 200
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
A +G E L +F M P+ T +++L+AC +G++ LGRR ++ ++ G+
Sbjct: 201 AANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRR-VHVFVAKVGLVGN 259
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+IDL + G + +A K+ M W SL+ + G
Sbjct: 260 AHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNG 306
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 213/326 (65%), Gaps = 4/326 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+A G+++ A+ +F+ M ++V+SWT +I GY +M+ A+ LFR MQ+ NVKPDE M
Sbjct: 226 FAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTM 285
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L ACA LGA+ELGEW+ I++ + NAL+DMY K G + KA +VF+ M
Sbjct: 286 VSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQ 345
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K TWTTMI GLA++G G EAL MFS M A V P+EIT+I +L AC +V+ G+ +
Sbjct: 346 KDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSF 401
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M ++GI+P + YGCM+DLLG G L+EA +++ MP + N+ +WGS L A ++
Sbjct: 402 FTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHK 461
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+V+L + A + +++LEP N Y +L NIYA +W ++RK+M + G+KK PGCS +
Sbjct: 462 NVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLM 521
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
E++ V+EFVAGD SHP +Y L
Sbjct: 522 ELNGNVYEFVAGDQSHPQSKEIYAKL 547
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 39/248 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
++ G ++ A +F++ V++W +++GY ++ Q F+ + M
Sbjct: 152 FSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQ-------FKISK----------M 194
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID-MYAKSGKIGKALQVFENMK 137
L LSAC++L +E G+ I YI N +++ M+A G++ +A VF+NMK
Sbjct: 195 LLVLSACSKLKDLEWGKHIFKYI-----------NGGIVEHMFAACGEMDEAQGVFDNMK 243
Query: 138 NKSVITWTTMIAGLAL--HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+ V++WT MI G H +G AL +F M+ + VKP+E T ++IL AC +G +ELG
Sbjct: 244 TRDVVSWTAMIDGYLRMNHFIG--ALALFREMQMSNVKPDEFTMVSILIACALLGALELG 301
Query: 196 RRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ K + + ++D+ + G +++A+K+ + M ++ + W +++
Sbjct: 302 EWVKTCIDKN---SNKNDSFVGNALVDMYFKCGNVRKAKKVFKEM-YQKDKFTWTTMIVG 357
Query: 254 SNIYGDVE 261
I G E
Sbjct: 358 LAINGHGE 365
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G++N A +F+ + ++ W T+I GY+++ P ++++ M N+KPD +L
Sbjct: 55 GNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSL 114
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+ A++ G+ + N+ ++G ++ + + A I M++ G + A +VF+ V+
Sbjct: 115 KGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVV 174
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR----- 197
TW M++G ++R+++ ++ + +LSAC + +E G+
Sbjct: 175 TWNIMLSG-------------YNRVKQFKIS----KMLLVLSACSKLKDLEWGKHIFKYI 217
Query: 198 --------------------YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
F+ MK+R + + MID R + A L R
Sbjct: 218 NGGIVEHMFAACGEMDEAQGVFDNMKTR-----DVVSWTAMIDGYLRMNHFIGALALFRE 272
Query: 238 MPF---EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 294
M + + S+L A + G +ELGE + K +++ N + + N A++ +
Sbjct: 273 MQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDK---NSNKNDSFVGN--ALVDMY 327
Query: 295 NESGKIRKVMR 305
+ G +RK +
Sbjct: 328 FKCGNVRKAKK 338
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K G++ A+ +F+ M +K+ +WTT+I G A EA+ +F M +V
Sbjct: 321 NALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVT 380
Query: 73 PDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDEI + L AC V+ G+ + N Q+G+ V ++D+ G + +AL+
Sbjct: 381 PDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALE 436
Query: 132 VFENMKNK-SVITWTTMIAGLALH 154
V NM K + I W + + +H
Sbjct: 437 VIVNMPVKPNSIVWGSPLGACRVH 460
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 4/161 (2%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYA--KSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH++ + GL++ N +I +SG + A QVF+ + + S+ W TMI G +
Sbjct: 26 IHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKI 85
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
+ M+ M + +KP+ TF L ++ G+ N ++G + +
Sbjct: 86 SHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLN-HAVKHGFDSNLFV 144
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
I + G + A K+ M W +L+ N
Sbjct: 145 QKAFIHMFSLCGIVDLAHKVF-DMGDACEVVTWNIMLSGYN 184
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/319 (44%), Positives = 205/319 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++G+A+ G + A LF+ M E NV+SW +IAGY+Q Q A+ LF +MQ+ ++
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ L ACA L +E G H + + G + V + N L+ MYAK G I A +
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + + + MI G A++G +E+L++F +M+ +KP+ +TF+ +LSACCH GL
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGL 504
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF+IM Y I P +E YGCMIDLLGRAG EA L+ +MP + +A +WGSLL
Sbjct: 505 VDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A + +++LGE QHLI L P N Y +LSNIYA GRW++ G +R M+D VKK
Sbjct: 565 SACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624
Query: 312 MPGCSYIEVSKRVHEFVAG 330
GCS+I + K+VH F+ G
Sbjct: 625 KLGCSWIVIKKQVHAFLVG 643
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 13/249 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ Y K+G L AR +F+ M KNV+SWT +IA YA+ + EA+ F MQ ++
Sbjct: 104 NKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQ 163
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L AC L LGE+ H+ I + G + V + N L+DMYAK G I A ++
Sbjct: 164 PNHFTFASILPACTDLEV--LGEF-HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAREL 220
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V++W MIAG +GL +AL +F + + V IT+ +++ G V
Sbjct: 221 FDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDV 276
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E F M E + + MI + G ++EA KL + MP E N W ++++
Sbjct: 277 ENAVELFEKMP-----EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMP-ERNVISWNAVIS 330
Query: 253 ASNIYGDVE 261
G VE
Sbjct: 331 GFAQNGQVE 339
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 132/240 (55%), Gaps = 19/240 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY + G + +A LF+ + +++VI+W T++AGYAQ A+ LF +M +N+
Sbjct: 232 WNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL 291
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKI 126
++ ++ Q G+V+ E + L I+P NA+I +A++G++
Sbjct: 292 ----VSWNTMIAGYVQNGSVK---------EAFKLFQIMPERNVISWNAVISGFAQNGQV 338
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+AL++F+ M +V++W MIAG + +G AL +F +M+ +KPN TF +L AC
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPAC 398
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ ++E G ++ R G + + ++ + + G +++A K+ RM + +A++
Sbjct: 399 AALAVLEQGNEAHEVV-IRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASL 457
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
L+ + + EA+ + + M + P + L C ++ + +H ++ Q
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 106 LNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+ L N L+ +Y K G + +A +VF+ M K+V++WT MIA A H G+EAL F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M+ ++PN TF +IL AC L LG + I+K G E + ++D+ +
Sbjct: 155 YEMQDVGIQPNHFTFASILPAC--TDLEVLGEFHDEIVKG--GFESNVFVGNGLVDMYAK 210
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G ++ A +L +MP + + W +++A
Sbjct: 211 RGCIEFARELFDKMP-QRDVVSWNAMIAG 238
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 233/358 (65%), Gaps = 1/358 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
NT++ YAK G+++ +R +F+ M E +V SW +LIA YAQ EA +LF M + V
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + + A L ACA GA+++G+ IH+ + + L + + +++DMY K G++ A +
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ +K K+V +WT M+AG +HG G+EA+ +F M R +KPN ITF+++L+AC H GL
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G +FN MK + +EP IE Y CM+DLLGRAGYL+EA L++ M + + +WGSLL
Sbjct: 417 LKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VELGE + + L KL+P N G Y +LSNIYA GRW++ ++R +M++ G+ K
Sbjct: 477 GACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLK 536
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PG S +E RVH F+ GD HP +++Y+ L ++N +++ ++ N S + + DV
Sbjct: 537 TPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDV 594
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 140/258 (54%), Gaps = 14/258 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVENV 71
+ ++ Y+K G LN+AR LF+ + E+NV+SWT++I+GY Q ++ EA+ LF+ + V+
Sbjct: 125 SALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDET 184
Query: 72 KPDEIAML----------AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
DEI + +SACA++ + E +H + G + + N L+D YA
Sbjct: 185 DYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYA 244
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFI 180
K G+I + +VF+ M+ V +W ++IA A +GL EA +FS M +R V+ N +T
Sbjct: 245 KCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLS 304
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
A+L AC H G +++G+ + + + +E + ++D+ + G ++ A K R+
Sbjct: 305 AVLLACAHSGALQIGKCIHDQV-VKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK- 362
Query: 241 EANAAIWGSLLAASNIYG 258
N W ++A ++G
Sbjct: 363 RKNVKSWTVMVAGYGMHG 380
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 114/238 (47%), Gaps = 14/238 (5%)
Query: 27 NARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N R++F +K +V SW ++IA +A+ +A+ F M+ ++ P+ + +C
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+ L + G+ IH +G + + + +ALIDMY+K G + A ++F+ + ++V++WT
Sbjct: 97 SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWT 156
Query: 146 TMIAGLALHGLGREALDMF-----------SRMERARVKPNEITFIAILSACCHVGLVEL 194
+MI+G + REA+ +F + V + + ++SAC V V+
Sbjct: 157 SMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV-CVKS 215
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + + G E + ++D + G + + K+ M E + W SL+A
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIA 272
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 223/337 (66%), Gaps = 4/337 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W M++GYA+ GD++NA ALFE M E++V SW ++A Q EA++LFRRM E +
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++P+E+ ++ LSACAQ G ++L + IH + + L++ V ++N+L+D+Y K G + +A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV---KPNEITFIAILSACC 187
VF+ KS+ W +MI ALHG EA+ +F M + + KP+ ITFI +L+AC
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV GR YF++M +R+GIEP+IE YGC+IDLLGRAG EA +++ M +A+ AIW
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLL A I+G ++L E A+++L+ L P+N G A+++N+Y +G W E+ + RK+++
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PG S IE+ VH+F + D SHP+ + +Y IL
Sbjct: 496 NAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 38/289 (13%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMD--QPNEAITLFRRMQVENV-KPDEIA 77
++ +L+ AR +F+ + N + ++ Y+ + A + FR M +V +P+
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-GKIGKALQVFENM 136
L + L + +H ++ + G + V + AL+ YA S I A Q+F+ M
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 137 KNKSVITWTTMIAGLA-------------------------------LHGLGREALDMFS 165
++V++WT M++G A +GL EA+ +F
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 166 RM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
RM ++PNE+T + +LSAC G ++L + + R + + ++DL G+
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG-IHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
G L+EA + +M + + W S++ ++G E + ++KL
Sbjct: 308 CGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 214/333 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR+LFE M E+NVISW+ +I G+ + EA+ F+ M +
Sbjct: 248 WNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGL 307
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD IA + A+SACAQLGA+E G W+H+Y+E+ L + V + ALIDMY K G + A+
Sbjct: 308 RPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAML 367
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M +SV+TW MI GL HG G +A+ +F RME V ++++ + +L+AC H GL
Sbjct: 368 IFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGL 427
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F+ MK +GI+PK+E YG ++DLLGRAG L +A + MP E +WGSLL
Sbjct: 428 VSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLL 487
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA + VEL E +++ L L +SG Y +LSNIYA G W + +IRK+M D G++K
Sbjct: 488 AACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRK 547
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV +HEFV G S+ D +Y +L
Sbjct: 548 DIGRSVIEVDGEIHEFVNGVGSYICKDEMYLML 580
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 22/253 (8%)
Query: 16 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 75
V A + D+ AR L ++ +W T I +A +P A+ F RM+ V+PD
Sbjct: 57 VPSAAALADVVFAR--LPLPAARDPFAWNTAIRLHAPA-RPRAALLYFARMRRCGVRPDA 113
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
A L AC G +H + GL + NALI Y + I +VF+
Sbjct: 114 YTFPAVLKACGCAPGCRAGLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDE 173
Query: 136 MK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG--L 191
++ +++W +M+AG G A +MF M + + ++ ++ G
Sbjct: 174 AGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEMP----QKDTFSWATLIDGYGKQGGAG 229
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ R F+ M R + + MID R G + EA L MP E N W +
Sbjct: 230 VDRARELFDQMPER-----DLVCWNSMIDGYARHGRMDEARSLFEEMP-ERNVISWSIV- 282
Query: 252 AASNIYGDVELGE 264
I G V GE
Sbjct: 283 ----IDGHVSCGE 291
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 207/314 (65%), Gaps = 2/314 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G++ NAR LF+ EK+V++W T+IAGY + +A+ +F M+
Sbjct: 213 WNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGE 272
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKAL 130
PDE+ ML+ LSACA LG +++G +H I + + V L NAL+DMYAK G I AL
Sbjct: 273 CPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIAL 332
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHV 189
QVF+ M+ K V TW ++I GLA HG E++ +F+ M+ + +KPNEITF+ ++ AC H
Sbjct: 333 QVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHA 392
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G VE GRRYF +M+ RY IEP + +GCM+DLLGRAG L EA +L+ +M E NA IW +
Sbjct: 393 GNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRT 452
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++G+VELG A + L+KL SG+Y +LSNIYA G W+ + ++RK+M D GV
Sbjct: 453 LLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGV 512
Query: 310 KKMPGCSYIEVSKR 323
+K G S IE R
Sbjct: 513 RKEAGRSLIEADDR 526
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 40/249 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ ++ GDL AR++F + E++V+SW+ L AGYA+ + A +F M V+
Sbjct: 152 NTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPVK--- 208
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+L W N +I Y K+G++ A +
Sbjct: 209 -------------------DLVSW-----------------NVMITGYVKNGEMENARTL 232
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ K V+TW TMIAG L G R+AL+MF M P+E+T +++LSAC +G +
Sbjct: 233 FDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDL 292
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
++GR+ + + + ++D+ + G ++ A ++ ++M E + W S++
Sbjct: 293 QVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMR-EKDVTTWNSVIG 351
Query: 253 ASNIYGDVE 261
+G E
Sbjct: 352 GLAFHGHAE 360
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 36/303 (11%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G +N A +F +TE ++ W T++ G +Q P++ + L+ +M+ VKPD+ L
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
C +L + G +H + +YG + N LI ++ G + A +F ++ +SV+
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W+ + AG A G A +F M VK + +++ +++ G +E R F+
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMP---VK-DLVSWNVMITGYVKNGEMENARTLFD-- 234
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE--------ANAAIWGSLLAAS 254
E + + MI AGY+ E+ FE + SLL+A
Sbjct: 235 ---EAPEKDVVTWNTMI-----AGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSAC 286
Query: 255 NIYGDVELGE---CALQHLIKLEPHNSGNYAI-----LSNIYAILGRWNESGKIRKVMRD 306
GD+++G C++ + + G+ ++ L ++YA G + ++ K MR+
Sbjct: 287 ADLGDLQVGRKLHCSISEMTR------GDLSVLLGNALVDMYAKCGSIEIALQVFKKMRE 340
Query: 307 MGV 309
V
Sbjct: 341 KDV 343
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG I A QVF + + W TM+ G + + + ++++ME VKP++ TF +
Sbjct: 60 SGAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFL 119
Query: 183 LSACCHVGLVELGRRYFNIMKS--RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
L C + + G F + +YG E +I G L A + +P
Sbjct: 120 LKGCTRLEWRKTG---FCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLP- 175
Query: 241 EANAAIWGSLLAA 253
E + W +L A
Sbjct: 176 ERSVVSWSALTAG 188
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 213/334 (63%), Gaps = 6/334 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ G+ + G ++ AR F + EK+++SW T++ Y + D NE+ +F +MQ NV
Sbjct: 437 WNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV 496
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ +++ LS+CA++GA+ G W++ YIE+ + L ALIDMY K G + A +
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYE 556
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F + K+V WT M+A A+ G EA+D++ ME VKP+ +TFIA+L+AC H GL
Sbjct: 557 IFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGL 616
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +YFN ++S Y I P I YGCM+DLLGR G+L+E K + RMP E + +IW SL+
Sbjct: 617 VDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLM 676
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VEL E A + LI+++P N+G + +LSNIYA GRW++ K+R + + GV K
Sbjct: 677 RACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPK 736
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 345
PG + IE + VHEFVA + D ILC
Sbjct: 737 QPGFTMIEQNGVVHEFVASNLVSAD------ILC 764
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 156/281 (55%), Gaps = 37/281 (13%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W T+V+GY K ++ AR LF+ M E++++SWTT+++GY Q E++ LF++M+ EN
Sbjct: 304 LWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFEN 363
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PDE+A++ LSAC L +LG +H +I YG+ L NAL+D+YAK GK+ +AL
Sbjct: 364 VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEAL 423
Query: 131 QVFENMKNKS-------------------------------VITWTTMIAGLALHGLGRE 159
+ FE + KS +++W TM+ H L E
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN--IMKSRYGIEPKIEQYGC 217
+ ++F +M+ + VKP++ T I++LS+C VG + G + N I K+ GI+ +
Sbjct: 484 SFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG-IWVNVYIEKNEIGIDAMLGT--A 540
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ G+ G ++ A ++ ++ E N +W +++AA + G
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAMEG 580
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 38/331 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G L LFE MT ++VISW T+I+ Y EA+ LF M V V
Sbjct: 172 NNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL 231
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG-------- 124
PDEI M++ +S CA+L +E+G+ +H YI L L N L+DMY+K G
Sbjct: 232 PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGL 291
Query: 125 -------------------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
KI KA Q+F+ M +S+++WTTM++G G E
Sbjct: 292 LSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCE 351
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
+L++F +M V P+E+ + +LSAC H+ +LGR + + YG+ ++
Sbjct: 352 SLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT-YGMLVDGFLGNALL 410
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
DL + G L EA + ++P ++ AA W S+L G V+ A K+ +
Sbjct: 411 DLYAKCGKLDEALRTFEQLPCKS-AASWNSMLDGFCRSGGVDK---ARDFFNKIPEKDIV 466
Query: 280 NYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
++ + N Y +NES +I M+ VK
Sbjct: 467 SWNTMVNAYVKHDLFNESFEIFCKMQSSNVK 497
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%), Gaps = 4/241 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A V +L+ A + E I W TL+ + P E + + M + V D
Sbjct: 73 VLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLD 132
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ AC + V+LG +H I + G LNN L+ +Y+K GK+ + Q+FE
Sbjct: 133 ISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFE 192
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++ VI+W TMI+ L G+ REALD+F M + V P+EIT ++++S C + +E+
Sbjct: 193 KMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEM 252
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAIWGSLLA 252
G+R + I+ ++ I + C++D+ + G + EA LL R E + +W +L++
Sbjct: 253 GKRLHLYIVDNKLWIRGSL--LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVS 310
Query: 253 A 253
Sbjct: 311 G 311
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 222/348 (63%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G++ AR +F+ + +K+V++W +I GYAQ NEAI+LF M+ V
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + LSAC+ +GA+ELG + Y GL V + AL+DMYAK G + KA++V
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F M+ K+V +W +I GLA +G G EA+ F M +KP++ITFI +LSAC H GL
Sbjct: 389 FRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGL 448
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+R+FN + S + I PKIE Y CM+DLL R+G+L+E + ++P + +A + G+LL
Sbjct: 449 VKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALL 508
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+GE + +I+LEP NS NY + S IYA GR ++S K+R MR+ GV K
Sbjct: 509 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGPMRERGVNK 568
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++E+S +V EF AGD D +YQ+L + +M+ ++ N
Sbjct: 569 TPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPN 616
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
++++ Y+ + D AR +F + ++V+SW ++ Y ++ E + R M + V
Sbjct: 167 HSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAV 226
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ + + G+ T + +AL+ MY K G+I +A +
Sbjct: 227 VPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARR 286
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+++ +K V+ W MI G A +G+ EA+ +F M++A V P++IT +LSAC VG
Sbjct: 287 VFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGA 346
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG R G+ + ++D+ + G L +A ++ R+M + N A W +L+
Sbjct: 347 LELGSELDGYASCR-GLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCK-NVASWNALI 404
Query: 252 AASNIYGDVELGECALQHL 270
G G+ A+QH
Sbjct: 405 CGLAFNGQ---GDEAIQHF 420
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H +E+ LN+ ++LI +Y+ G A +VF + ++ V++W M+ G+
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 158 REALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
E M M + V PN +T +L+AC G + LGR KS G+E
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA-GMETDSLVGS 269
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + + G + EA ++ + + + W +++
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSI-IDKDVVAWNAMI 303
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 221/339 (65%), Gaps = 8/339 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ GY K G A +FE M++K+V++WT++I+ Y Q P +A+ LFR M ++
Sbjct: 210 NAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLR 269
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
PD A+++ LSA A LG VE G+W+H Y+ + + +ALIDMY+K G I A
Sbjct: 270 PDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYH 329
Query: 132 VFENMKNKSVI-TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF ++ ++ I W +MI+GLA+HGL REALD+F MER ++PNEITF+ +LS C H G
Sbjct: 330 VFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGG 389
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ YF M +Y I P+I+ YGCMIDL GRAG L++A +++ MPFEA+ W ++
Sbjct: 390 LVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAI 449
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+AS +G +E+G+ A I+L P +S +Y +LSNIYA GRW++ KIR +MR GVK
Sbjct: 450 LSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVK 509
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY--QILCKI 347
K+ GCS + V +VHEF+ G + D Y Q+L KI
Sbjct: 510 KIAGCSSMLVBGKVHEFLXGK----ELDSSYSGQVLAKI 544
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT+SRL+ + G L+ A ++F + N + LI G++ P E++
Sbjct: 39 FTVSRLI-----AFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLI 93
Query: 62 LFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
L+ RM + E ++ + L AC +L A + G +H + + L + N+++ M
Sbjct: 94 LYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM 153
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEIT 178
Y G+I A +VF+ M N+ V++W +MIAG G A ++F M ER V N
Sbjct: 154 YIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCN--- 210
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSR 205
A++ G EL + F M +
Sbjct: 211 --AMIDGYGKCGRCELAEKVFETMSDK 235
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 220/343 (64%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+F N ++ Y+K G + +AR +F+ M +++V+SWT L+ GYA Q E+ + F++M +
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+ ++I + L AC+ A++ G+ IH + + G+ + + NAL+ MY K G + A
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++V E M + V+TW T+I GLA +G G EAL F M+ ++PN TF+ ++SAC
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LVE GRR F M+ YGI P + Y CM+D+L RAG+L EAE ++ MPF+ +AA+WG+
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA +G+VE+GE A + +KLEP N+G Y LS IYA G W + K+RK+M++ GV
Sbjct: 623 LLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KK PG S+IEV+ VH FVAGD SHP + +Y L + Q+K
Sbjct: 683 KKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIK 725
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 2/248 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YAK G + +AR +F+ M ++ +SWTTL YA+ E++ + M E V+
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P I + LSAC L A+E G+ IH I + ++ V ++ AL MY K G + A +V
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + N+ VI W TMI GL G EA MF RM + V P+ +T++AILSAC G +
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ + + G+ + +I++ +AG +++A ++ RMP + + W +L+
Sbjct: 364 ACGKE-IHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVG 421
Query: 253 ASNIYGDV 260
G V
Sbjct: 422 GYADCGQV 429
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y G +N AR LF+ + K+V+SW +I+GYA EA LF MQ E ++
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ ++ LSAC+ A+ G +H + + GL + NALI MYAK G + A +V
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRV 202
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++ ++WTT+ A G +E+L + M + V+P+ IT++ +LSAC + +
Sbjct: 203 FDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAAL 262
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ + I++S + + ++ + + + G +++A ++ +P + W +++
Sbjct: 263 EKGKQIHAQIVESEHHSDVRVST--ALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMI 319
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
G +E ++K + P AILS
Sbjct: 320 GGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILS 355
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 129/234 (55%), Gaps = 4/234 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G + +AR +FE + ++VI+W T+I G Q EA +F RM E V PD +
Sbjct: 291 YIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTY 350
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
LA LSACA+ G + G+ IH + GL + V NALI+MY+K+G + A QVF+ M
Sbjct: 351 LAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK 410
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ V++WT ++ G A G E+ F +M + V+ N+IT++ +L AC + ++ G+
Sbjct: 411 RDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEI 470
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ ++K+ GI + ++ + + G +++A ++ M + W +L+
Sbjct: 471 HAEVVKA--GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLI 521
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L +C + + +G+ +H +I ++G+ V + N L+ +Y G + +A ++F+ NKSV
Sbjct: 51 LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSV 110
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFN 200
++W MI+G A GLG+EA ++F+ M++ ++P++ TF++ILSAC + GR +
Sbjct: 111 VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVR 170
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+M++ G+ +I + + G +++A ++ M + W +L A
Sbjct: 171 VMEA--GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVS-WTTLTGA 220
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 222/330 (67%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M++ Y+ G + A A+F + K+ + WT +I G+ + ++ N A+ FR MQ ENV+
Sbjct: 216 TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVR 275
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ LSAC+QLGA+E+G W+H+Y+ ++ + + + NALI+MY++ G I +A V
Sbjct: 276 PNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTV 335
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK++ VIT+ TMI+GL+++G R+A+++F M R++P +TF+ +L+AC H GLV
Sbjct: 336 FDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLV 395
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + F+ M YG+EP+IE YGCM+DLLGR G L+EA L+R M + + G+LL+
Sbjct: 396 DFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLS 455
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++ELGE + L +SG Y +LS++YA G+W E+ ++R M++ G++K
Sbjct: 456 ACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKE 515
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
PGCS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 516 PGCSSIEVNNEIHEFLLGDLRHPRKERIYE 545
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+K ++ A +F+ NV +T LI G+ +AI L+ RM +++ PD M
Sbjct: 92 SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMA 151
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--- 136
+ L AC A+ G +H+ + GL++ + ++++Y K G++G A +VFE M
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 211
Query: 137 ---------------------------KNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
+ K + WT MI G + AL+ F M+
Sbjct: 212 VVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQG 271
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
V+PNE T + +LSAC +G +E+GR + M+ ++ IE + +I++ R G +
Sbjct: 272 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR-KFEIELNLFVGNALINMYSRCGSID 330
Query: 230 EAEKLLRRM 238
EA+ + M
Sbjct: 331 EAQTVFDEM 339
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ +K I A ++F+ N +V +T +I G G +A+ ++SRM + P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+IL AC + GR + + G+ +++L G+ G L +A ++
Sbjct: 147 NYLMASILKACGSQLALREGREVHS-RALKLGLSSNRLVRLRIMELYGKCGELGDARRVF 205
Query: 236 RRMPFEANAA 245
MP + A+
Sbjct: 206 EEMPEDVVAS 215
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 228/354 (64%), Gaps = 13/354 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNT++ GY K G++ A LF+ M E+NV+SW+T+++GY + A +F +M +N
Sbjct: 547 WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNL 606
Query: 71 -----------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
V+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALIDM
Sbjct: 607 VTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDM 666
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
+ K G + +A VF+ K ++W ++I G A+HG G +AL++F++M++ P+ +T
Sbjct: 667 FCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVT 726
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
I +LSAC H+G V+ GRRYF+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ M
Sbjct: 727 MINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSM 786
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P+E N IWGSLL+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++
Sbjct: 787 PWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMA 846
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K R M+ G +K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 847 KARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 900
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISW--TTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V+ YA + L ++R +F+ + + + ++ T++ YA P +A+ F M +
Sbjct: 390 LVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMP----R 445
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + A + G + +H+++ + G + NALID Y+K+G A +V
Sbjct: 446 RDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKV 504
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V++W T +A + G A +F M + + +++ IL G V
Sbjct: 505 FDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMP----EKDTVSWNTILDGYTKAGEV 560
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E F M R + + M+ + G L+ A + +MP + N W ++
Sbjct: 561 EAAFELFQRMPER-----NVVSWSTMVSGYCKKGDLEMARVIFDKMPGK-NLVTWTIMMK 614
Query: 253 ASNIYGDV 260
+++ DV
Sbjct: 615 EASVELDV 622
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 210/341 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY G L+ A +F++M KN +SW +++GY +A+ LF +M+ E+V
Sbjct: 371 WNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDV 430
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP + A++AC +LGA++ G +H ++ Q G NAL+ MYAK G + A
Sbjct: 431 KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL 490
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M N ++W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H GL
Sbjct: 491 VFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGL 550
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF MK +GI P + Y +IDLLGR+G + EA L++ MPFE +IW ++L
Sbjct: 551 VDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAIL 610
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ GD+E G A L ++ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK
Sbjct: 611 SGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 670
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV ++H F+ GDT HP+ +YQ L I +M+
Sbjct: 671 EPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 711
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 132/247 (53%), Gaps = 12/247 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GY + GD+N AR++FE + K + W +I+GY Q +A LFRRM E V
Sbjct: 235 WTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKV 294
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIG 127
DE + LSACA G G+ +H I + N + +P+NNAL+ +Y+K GKI
Sbjct: 295 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 354
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A ++F+ M K V++W T+++G G +A+++F M N+++++ ++S
Sbjct: 355 IAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYV 410
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANA 244
H GL E + FN M++ ++P Y I G G L+ +L L + FEA+
Sbjct: 411 HGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN 469
Query: 245 AIWGSLL 251
+ +LL
Sbjct: 470 SAGNALL 476
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 51/348 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVE 69
++VA A G L +A A F+ + ++ + +++ +A+ A+++F +
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 70 NVKPDEIAMLAALSACAQLG--AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+++PD+ + A +SA Q+ A +H + + G ++ ++NALI +Y K
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 128 ---KALQVFENMKNKSVITWTTM-------------------------------IAGLAL 153
A +V + M +K +TWTTM I+G
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI---MKSRYGIEP 210
G+ +A ++F RM +V +E TF ++LSAC + G G+ ++ + E
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ ++ L + G + A+++ M + + W ++L+ Y D + A++ +
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSG---YIDSGCLDKAVE-V 390
Query: 271 IKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
K+ P+ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 391 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP---CDY 435
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 210/341 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY G L+ A +F++M KN +SW +++GY +A+ LF +M+ E+V
Sbjct: 373 WNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDV 432
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP + A++AC +LGA++ G +H ++ Q G NAL+ MYAK G + A
Sbjct: 433 KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL 492
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M N ++W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H GL
Sbjct: 493 VFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGL 552
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF MK +GI P + Y +IDLLGR+G + EA L++ MPFE +IW ++L
Sbjct: 553 VDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAIL 612
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ GD+E G A L ++ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK
Sbjct: 613 SGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 672
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV ++H F+ GDT HP+ +YQ L I +M+
Sbjct: 673 EPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 713
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 132/247 (53%), Gaps = 12/247 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GY + GD+N AR++FE + K + W +I+GY Q +A LFRRM E V
Sbjct: 237 WTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKV 296
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIG 127
DE + LSACA G G+ +H I + N + +P+NNAL+ +Y+K GKI
Sbjct: 297 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 356
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A ++F+ M K V++W T+++G G +A+++F M N+++++ ++S
Sbjct: 357 IAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYV 412
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANA 244
H GL E + FN M++ ++P Y I G G L+ +L L + FEA+
Sbjct: 413 HGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN 471
Query: 245 AIWGSLL 251
+ +LL
Sbjct: 472 SAGNALL 478
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 152/348 (43%), Gaps = 51/348 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVE 69
++VA +A G L +A A F+ + ++ + +++ +A+ A+++F +
Sbjct: 98 TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157
Query: 70 NVKPDEIAMLAALSACAQLG--AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+++PD+ + A +SA Q+ A +H + + G ++ ++NALI +Y K
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217
Query: 128 ---KALQVFENMKNKSVITWTTM-------------------------------IAGLAL 153
A +V + M +K +TWTTM I+G
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI---MKSRYGIEP 210
G+ +A ++F RM +V +E TF ++LSAC + G G+ ++ + E
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 337
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ ++ L + G + A+++ M + + W ++L+ Y D + A++ +
Sbjct: 338 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSG---YIDSGCLDKAVE-V 392
Query: 271 IKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
K+ P+ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 393 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP---CDY 437
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 232/335 (69%), Gaps = 4/335 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G AK G ++ +R LF+ M+ +N +SW ++I+GY + + +A+ LF++MQVE +
Sbjct: 191 WNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERI 250
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+P E M++ L+ACA LGA+ GEWIH+Y+ +++ LN IV A+IDMY+K G I KA
Sbjct: 251 EPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVV--TAIIDMYSKCGSIDKA 308
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+QVF++ + + W +MI GLA++G EAL +FS ++ + ++P++++FIA+L+AC H
Sbjct: 309 VQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHT 368
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ + YF +M+ +Y I+P I+ + CM+D+LGRAG L+EAE+L+R M + +A IWGS
Sbjct: 369 GMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGS 428
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL + YG++++ + A HLI+L P S ++ +++N YA + E+ K R +++ +
Sbjct: 429 LLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHI 488
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PGCS IEV VHEFVAG +HP+ +Y++L
Sbjct: 489 GKEPGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVL 523
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAM 78
+ GD+N A +F + N+ +W T+I G+++ P +I+L+ M + + V+P +
Sbjct: 66 SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTY 125
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ A AQL G +H + + GL + N ++ MY G +A +VF+ +
Sbjct: 126 PSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMD 185
Query: 139 KSVITWTTMIAGLALHGL-----------------------------GR--EALDMFSRM 167
++ W TMI G+A GL GR +AL++F +M
Sbjct: 186 FDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKM 245
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAG 226
+ R++P+E T +++L+AC +G + G + M K ++ + P + +ID+ + G
Sbjct: 246 QVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIV--VTAIIDMYSKCG 303
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLL 251
+ +A ++ + P + W S++
Sbjct: 304 SIDKAVQVFQSAP-RRGLSCWNSMI 327
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 227/344 (65%), Gaps = 2/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN+++AGY++ GD+ A LF+LM ++V+SWTT+I+GY+Q +A+ +F +M+ +
Sbjct: 79 WNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKE 138
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+P+E+ + + SACA+LGA+E+GE I +Y GL + ++N L++MYA+ GKI A
Sbjct: 139 VRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAAR 198
Query: 131 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF + K +++ +W +M+ GLA+HG EAL ++ +M ++P+++TF+ ++ AC H
Sbjct: 199 HVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHG 258
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV G + F M++ + I PK+E YGCM+DLLGRAG LQEA L++ MP + ++ IWG+
Sbjct: 259 GLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGT 318
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + + +VE E A + L ++EP N GNY IL NIYA RW+ K+RK+M+ +
Sbjct: 319 LLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQI 378
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K G S IE +H+F+ D SHP +Y +L +I+ +MK
Sbjct: 379 TKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMKL 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--- 122
M ++ P+E+ ACA ++ G+ IH + + G + V AL+DMYAK
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 123 ----------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
SG + AL++F+ M ++SV++WTTMI+G + +
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 155 GLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
G+ +AL+MF +ME+ + V+PNE+T ++ SAC +G +E+G R + + G+ +
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDN-GLMKNLY 179
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++++ R G + A + + N W S++ ++G
Sbjct: 180 VSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHG 224
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 216/329 (65%), Gaps = 4/329 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV GY G L+ AR LFE ++++ WT +I GY Q ++ E I LF MQ+ V
Sbjct: 278 WTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGV 337
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ ++ L+ CAQ GA+E G+WIHNYI++ + + ALI+MYAK G I K+ +
Sbjct: 338 KPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFE 397
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +K K +WT++I GLA++G EAL++F M+ +KP++ITF+A+LSAC H GL
Sbjct: 398 IFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGL 457
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WG 248
VE GR+ F+ M S Y IEP +E YGC IDLLGRAG LQEAE+L++++P + N I +G
Sbjct: 458 VEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYG 517
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A YG++++GE L K++ +S + +L++IYA RW + K+R M+D+G
Sbjct: 518 ALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLG 577
Query: 309 VKKMPGCSYIEVSKRVHEFVA-GDTSHPD 336
+KK+PG S IEV + + ++ G PD
Sbjct: 578 IKKVPGYSAIEVDGKWQQRLSEGPFPFPD 606
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 141/275 (51%), Gaps = 39/275 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+ + YA++G + +FE M +++ +SW +I+GY + + EA+ ++RRM E N
Sbjct: 147 NSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNE 206
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP+E +++ LSACA L +ELG+ IH+YI + L TI + NAL+DMY K G + A
Sbjct: 207 KPNEATVVSTLSACAVLRNLELGKEIHDYIASELDLTTI--MGNALLDMYCKCGHVSVAR 264
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR------------------------ 166
++F+ M K+V WT+M+ G + G +A ++F R
Sbjct: 265 EIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEE 324
Query: 167 -------MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
M+ VKP++ + +L+ C G +E G+ N I ++R ++ + +
Sbjct: 325 TIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGT--AL 382
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
I++ + G ++++ ++ + E + W S++
Sbjct: 383 IEMYAKCGCIEKSFEIFNGLK-EKDTTSWTSIICG 416
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 151/322 (46%), Gaps = 20/322 (6%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+ +GD N A +F + + ++ + +I + + AI+LF++++ V PD
Sbjct: 53 SSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYP 112
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +G V GE +H ++ + GL + N+ +DMYA+ G + QVFE M ++
Sbjct: 113 YVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDR 172
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 198
++W MI+G EA+D++ RM + KPNE T ++ LSAC + +ELG+
Sbjct: 173 DAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEI 232
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + S + + ++D+ + G++ A ++ M + N W S++ I G
Sbjct: 233 HDYIASELDLTTIMGN--ALLDMYCKCGHVSVAREIFDAMTVK-NVNCWTSMVTGYVICG 289
Query: 259 DVELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK------ 311
++ ++L + P + + + N Y R+ E+ + M+ GVK
Sbjct: 290 QLDQA----RNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVV 345
Query: 312 --MPGCSY---IEVSKRVHEFV 328
+ GC+ +E K +H ++
Sbjct: 346 TLLTGCAQSGALEQGKWIHNYI 367
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 224/342 (65%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T+V+ Y K GD+ AR +F+ M KN+++WT +++ AQ EA LF M+ +
Sbjct: 335 WSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAI 394
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D +A+++ L+ACA+ G + LG+ IH ++ Q L + NAL+DM+ K G + +A
Sbjct: 395 ELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADY 454
Query: 132 VFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K ++W +I G A+HG G +AL++F++M++ P+ +T I +LSAC H+G
Sbjct: 455 IFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMG 514
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GRR+F M++ YGI+P+IE YGCM+DLLGR G ++EA +++ MP+E N IWGSL
Sbjct: 515 LVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSL 574
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ +VE E A L L+P N+GNYA+LSNIYA G+W++ K R M+ G +
Sbjct: 575 LSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQ 634
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S+IE+ + HEF GD HP+ D++ ++ +++ +K
Sbjct: 635 KTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSHVK 676
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 46/260 (17%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
TL+ YA P+ A+ +F M + + L A A + V H ++ +
Sbjct: 177 TLLRAYALNSLPHAALAVFVDMPLRQRDTFTYSFLIKALATAGVTPVRAA---HTHVFKL 233
Query: 105 GLNTIVPLNNALIDMYAKS-------------------------------GKIGKALQVF 133
G + NALID Y+K+ G++ A +F
Sbjct: 234 GSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMF 293
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M K ++W TM+ G A G EA ++F RM V +++ ++SA C G +E
Sbjct: 294 DEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNV----VSWSTVVSAYCKKGDME 349
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSL 250
+ R F+ M ++ + + M+ + G + EA +L M E + S+
Sbjct: 350 MARVIFDKMPAK-----NLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSI 404
Query: 251 LAASNIYGDVELGECALQHL 270
LAA G + LG+ +H+
Sbjct: 405 LAACAESGCLALGKRIHRHV 424
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 214/331 (64%), Gaps = 8/331 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ--------MDQPNEAITLFRRMQVEN 70
YAK G + R LF +++ ++ SW ++++ Y + E +TLF MQ
Sbjct: 154 YAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSL 213
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+K +E+ ++A +SACA+LGA+ G W H Y+ ++ L + ALIDMY+K G + A
Sbjct: 214 IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLAC 273
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
Q+F+ + ++ + + MI G A+HG G +ALD+F +M + P+++T + + +C HVG
Sbjct: 274 QLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVG 333
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G F MK YG+EPK+E YGC++DLLGRAG L+EAE+ + MP + NA IW SL
Sbjct: 334 LVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSL 393
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A+ ++G++E+GE L+HLI+LEP SGNY +LSN+YA + RW++ ++RK+M+D G+
Sbjct: 394 LGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGIN 453
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
K+PG S +EV +HEF+ GD +HP +Y
Sbjct: 454 KVPGSSLVEVGGAMHEFLMGDKTHPRSKEIY 484
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRRMQVEN-VKPDEIAMLAAL 82
+A ++F + + + TLI+ A + A +L+ R+ +KP+ +
Sbjct: 56 FTHALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLF 115
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSV 141
AC + G +H ++ ++ T P + AL++ YAK GK+G +F + +
Sbjct: 116 KACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDL 175
Query: 142 ITWTTMIAGLALH--------GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+W ++++ + L E L +F M+++ +K NE+T +A++SAC +G +
Sbjct: 176 ASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALS 235
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + ++ ++ ++ +ID+ + G L A +L ++P + + +++
Sbjct: 236 QG-AWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHR-DTLCYNAMIGG 293
Query: 254 SNIYG 258
I+G
Sbjct: 294 FAIHG 298
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 221/342 (64%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T++A YA + AR +F+ M E++V+S++ ++A Y + ++ EA+ LFR + +
Sbjct: 156 WTTLLACYANSCSVEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKI 215
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+P + +++ L ACA LGA+++G W+++++ G + ALIDM+ K G I AL
Sbjct: 216 EPSDSCVMSVLCACANLGALDVGRWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHAL 275
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE K K V WT M++GLA+HGLG + ++ F +M + +KP+E+TF+A+LS C H G
Sbjct: 276 LVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSG 335
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV G YF+ M+S +G+EP +E +GC++DLLGRAG + +A +L+ MPFE NAAIWG+L
Sbjct: 336 LVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGAL 395
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +Y +VE+GE A Q LIK EP N Y L ++Y GRW+E K++ M+++G +
Sbjct: 396 LNACRVYKNVEVGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCR 455
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS IEV +EFV GD SHP + L K N + K
Sbjct: 456 KGPGCSLIEVGGICYEFVVGDKSHPCAVEICLNLSKANMEFK 497
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 39/273 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L++AR LF+ + + + T+ YA P A+ L R M PD L A
Sbjct: 37 LHHARLLFDAVYHPSTYLYNTMFRVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKA 96
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C+ L + G+ +H ++GL V + N+LI +Y + ++ A +VF+ M + + +W
Sbjct: 97 CSALAHLLKGQELHCQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASW 156
Query: 145 TTMIAG----------------------------LALHGLG---REALDMFSRMERARVK 173
TT++A LA + G REAL++F + +++
Sbjct: 157 TTLLACYANSCSVEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIE 216
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--IEPKIEQYGCMIDLLGRAGYLQEA 231
P++ +++L AC ++G +++GR ++ + G ++ +I +ID+ + G ++ A
Sbjct: 217 PSDSCVMSVLCACANLGALDVGRWVYSFVCHSKGDYVDSRIAT--ALIDMFFKCGSIEHA 274
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
L+ E + W ++L+ ++G LGE
Sbjct: 275 -LLVFEGAKEKHVGEWTAMLSGLAMHG---LGE 303
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 213/341 (62%), Gaps = 2/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +VAG AKVG+L AR F M ++++SW +L+ GYA L M +E V
Sbjct: 235 WNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKV 294
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + M++ +SA + GA++ G W H ++ + + L +ALIDMY K G I +A +
Sbjct: 295 IPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASR 354
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + K V WTTMI GLA HG G +AL++FS M+ V P+++TF+++LSAC H GL
Sbjct: 355 VFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQE-DVSPDDVTFVSVLSACSHSGL 413
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G + F+ M + YGIEP +E YGC++DLL R+G L EA+ ++ +MP + + +IWG++L
Sbjct: 414 VDQGIKVFSSM-TDYGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAML 472
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A GDVEL E A + L+ L+P G Y +LSNIYA GRW+ S KIR+ M GVKK
Sbjct: 473 NACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKK 532
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS + V VH F++ D HP + + IL + +MK
Sbjct: 533 TAGCSSVVVDGVVHNFISADKCHPGWVDISSILNCLKNEMK 573
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 161/341 (47%), Gaps = 43/341 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y + G + A +FE M +++S+ +I GYA+ EA+ LF M ++
Sbjct: 102 NTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLE 161
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIGKAL 130
PDE +L L +C QLG V+ G+ +H ++E+ +++ + L NAL+DMY K K+ AL
Sbjct: 162 PDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELAL 221
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-------------------ERAR 171
+ F +K K +++W ++AG A G +A F +M + A
Sbjct: 222 RTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFAS 281
Query: 172 VK------------PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
VK P+ +T I+++SA G ++ G R+ + R I+ +I
Sbjct: 282 VKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG-RWAHGWVIRMQIKLDAFLGSALI 340
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
D+ + G ++ A ++ + + + + +W +++ +G G AL+ +++ S
Sbjct: 341 DMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLAFHG---YGSKALELFSEMQEDVSP 396
Query: 280 NYAILSNIYAIL---GRWNESGKIRKVMRDMGVKKMPGCSY 317
+ ++ + G ++ K+ M D G++ PG +
Sbjct: 397 DDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIE--PGVEH 435
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITL 62
+SR +Y + + +L+ A LF T N+ + TLI+ ++ + + E+ L
Sbjct: 1 MSRFIY------FSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFSSLKKI-ESFYL 53
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+ + PD+ +L L A + V+ IH GL + L N LI +Y +
Sbjct: 54 YNVLLSSGECPDKQTLLYLLQAVNFISQVK---QIHCQAIVTGLFSFGYLQNTLIKVYLE 110
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
+G + A QVFE M + ++++ MI G A G G EA+ +F M ++P+E T + +
Sbjct: 111 NGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGL 170
Query: 183 LSACCHVGLVELGRRYFNIMKSR 205
L +C +G V+ G+ M+ R
Sbjct: 171 LVSCGQLGNVKFGKAVHGWMERR 193
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVG--DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
NTM+ YAK G DL AR +F+ M EK+V+SW ++IA YAQ +A+ L+R+M
Sbjct: 232 NTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVS 290
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++K + + + A L ACA G ++ G+ IHN + + GL V + +++DMY+K G++
Sbjct: 291 GSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEM 350
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F+ +K K++++W+ MI G +HG G+EALD+F+ M R+ PN ITFI++L+AC H
Sbjct: 351 ARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSH 410
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL++ GR ++N MK R+GIEP +E YGCM+DLLGRAG L EA L++ M + +AAIWG
Sbjct: 411 AGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWG 470
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +VEL E + + L +L+ N G Y +LSNIYA G W + ++R +++ G
Sbjct: 471 ALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRG 530
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG S +E+ R H F GD SHP +Y L K+ +M+ A ++ N S + + D
Sbjct: 531 IEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLD 590
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSA 84
+AR F+ + N + T + +GY + + ++ LFR++ DE A L A SA
Sbjct: 143 DARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSA 202
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--IGKALQVFENMKNKSVI 142
A++ + +H + + GL+ + N ++D YAK G+ +G A +VF+ M+ K V+
Sbjct: 203 SARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVV 261
Query: 143 TWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
+W +MIA A +G+ +AL ++ +M +K N +T AIL AC H G ++ G+ N
Sbjct: 262 SWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHN 321
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G+E + ++D+ + G ++ A K +++ E N W +++ ++G
Sbjct: 322 QV-VRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK-EKNILSWSAMITGYGMHG 377
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 215/325 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+T++ G+AK GD++ A LF+ M EKNV+SWTT++ G+++ +A+++F +M E V
Sbjct: 284 WSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGV 343
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ +++ALSACA++G +E G IH YI+ GL+ L AL+DMYAK G I A +
Sbjct: 344 RPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASE 403
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + KS+ TWT MI G A+HG +A+ F +M A +KP+E+ F+A+L+AC H G
Sbjct: 404 VFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQ 463
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V++G +F+ M+ Y IEP ++ Y ++D+LGR+G L+EA + + RMP + IWG+L
Sbjct: 464 VDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALF 523
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + ++ + AL L+KLEP ++GNY LSN YA LG+W ++ ++R +M++ GV K
Sbjct: 524 CACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHK 583
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPD 336
G S IEV +VH FV+GD H D
Sbjct: 584 NSGWSCIEVEGQVHRFVSGDHDHKD 608
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 69/304 (22%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
+N++ A+F KN+ ++ LI G AI FR M +KPD + L +
Sbjct: 129 INHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKS 188
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN--------- 135
A L + ELG IH I + G+ + +L+DMY K K+G A +VF+
Sbjct: 189 MAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGS 248
Query: 136 ---------------------------MKNKSVITWTTMIAGLA---------------- 152
M K ++W+T+I G A
Sbjct: 249 SALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMP 308
Query: 153 ----------LHGLGR-----EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ G R +AL MFS+M V+PN T ++ LSAC +G +E G R
Sbjct: 309 EKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLR 368
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+K G+ ++D+ + G ++ A ++ + + W ++ I+
Sbjct: 369 IHKYIKDN-GLHLTEALGTALVDMYAKCGNIESASEVFGETE-QKSIRTWTVMIWGWAIH 426
Query: 258 GDVE 261
G E
Sbjct: 427 GHSE 430
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH I + L++ + LI + I +L VF + K K++ T+ +I GL +
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE------- 209
A+ F M R+ +KP+ +T+ +L + + ELG + M R GIE
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMA-IHCMILRCGIELDSFVRV 218
Query: 210 ------PKIEQYGCMIDLLG-----------------------RAGYLQEAEKLLRRMPF 240
K+E+ G + +AG +++A KL + MP
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK 278
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
+ N + W +L+ GD++ A++ ++ N ++ + + ++ G ++ +
Sbjct: 279 KENVS-WSTLIDGFAKNGDMDR---AMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSM 334
Query: 301 RKVMRDMGVKK--------MPGCSYI---EVSKRVHEFVAGDTSH 334
M + GV+ + C+ I E R+H+++ + H
Sbjct: 335 FSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLH 379
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 142/336 (42%), Positives = 212/336 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+++ ++ +AR LF+ +EK++ SW +I+GYAQ +AI+LF+ MQ V+P+ + +
Sbjct: 353 YSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTV 412
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLGA+ LG+W+H+ I + + + ++ ALIDMYAK G I +A ++F M
Sbjct: 413 TSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE 472
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ +TW MI+G LHG G EAL++F+ M +RV P +TF+++L AC H GLV G
Sbjct: 473 KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M +G EP E Y CM+DLLGRAG L +A +R+MP E +WG+LL A I+
Sbjct: 533 FRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHK 592
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
D L A L +L+P N G Y +LSNIY+ + E+ +R V++ + K PGC+ I
Sbjct: 593 DANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLI 652
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
EV+ +H F +GD SHP +Y +L K+ G+M+ A
Sbjct: 653 EVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREA 688
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 153/298 (51%), Gaps = 6/298 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G++ AR LF + + +++S+ +I+GY ++ ++ LF+ + V K + ++
Sbjct: 252 YSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSI 311
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ + G + L IH + + G+ + ++ AL +Y++ +I A +F+
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSE 371
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
KS+ +W MI+G A +GL +A+ +F M++ V+PN +T +ILSAC +G + LG+
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWV 431
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+++ +R E I +ID+ + G + EA++L MP E NA W ++++ ++G
Sbjct: 432 HDLI-NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHG 489
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAI--LGRWNESGKI-RKVMRDMGVKKMP 313
++ +G LS +YA G E +I R ++ D G + +P
Sbjct: 490 YGHEALNLFNEMLHSRVSPTG-VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLP 546
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 36/329 (10%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +VA Y K + AR +F+ M E++ + W T+++G + +EAI +F M +
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + A L A+L + LG I + G ++ + L +Y+K G+I A +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI---------- 182
F + ++++ MI+G + ++ +F + + K N + + +
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324
Query: 183 -LSACCH---------------VGLVELGRRYFNIMKSRY----GIEPKIEQYGCMIDLL 222
L+ C H L + R I +R E + + MI
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384
Query: 223 GRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
+ G ++A L + M N S+L+A G + LG+ + LI E S
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESN 443
Query: 280 NY--AILSNIYAILGRWNESGKIRKVMRD 306
+ L ++YA G E+ ++ +M +
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPE 472
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+ T+++L +K + + ++ A LF + ++ + LI ++ + P+ A+
Sbjct: 42 LVTVTKLTHKL--------SHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAV 93
Query: 61 TLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+L+ ++ ++PD A + + A + L H+ + +G + V +A++
Sbjct: 94 SLYTHLRKSTPLEPDNFTY-AFVISGASSLGLGLLLHAHSIVAGFGSDLFV--GSAIVAC 150
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y K ++ A +VF+ M + + W TM++GL + EA+ +F M + + + T
Sbjct: 151 YFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTV 210
Query: 180 IAILSACCHVGLVELG 195
A+L + + LG
Sbjct: 211 AAVLPGVAELQDLALG 226
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 218/345 (63%), Gaps = 2/345 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V Y+++ D+ +A +F L K++++WT ++ GYAQ P +A+ F +M V +
Sbjct: 227 WTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGM 286
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+++ A+SACAQLGAV+ W+ E+ GL V + + L+DMYAK G I +A +
Sbjct: 287 PIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLVDMYAKCGLIDEARK 346
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VFE M +K+V T+++MI GLA HG + + +F+ M RA V+PN +TFI +L+AC H G
Sbjct: 347 VFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTACSHAG 406
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ GR YF MK RYGI P + Y CM+DLL R+G + EA L++ M E + +WG+L
Sbjct: 407 MVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGVWGAL 466
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G+ E+ + A +HL +LEP GNY +LSN A G W+E K+RK+MR G+K
Sbjct: 467 LGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLMRIRGLK 526
Query: 311 KMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K P S+ E VH+F AGD +HP + + L ++ ++ A
Sbjct: 527 KDPAVSWFEGRDGFVHQFFAGDNTHPSMHEIKKRLLELREKLNLA 571
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y+K G + +AR +F+ + +N + WT++IAGYAQ D EAI LFR MQ+
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFA 329
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + LSAC GA+ G WIH Y E+ + + NALI MY+K G I KAL++
Sbjct: 330 ADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEI 389
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGL 191
F + + +W+ +I+GLA++G +AL +FS+ME + ++PNEITF+ +L AC H G
Sbjct: 390 FHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGF 449
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YFN M Y + P IE YGCM+DLLGRA L EAEK +R +P + + IW SLL
Sbjct: 450 VDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLL 509
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G++EL E A + + +LEP G +LSN+YA RW + ++RK M +KK
Sbjct: 510 FACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKK 569
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS++E+ VHE D SHP+ +Y+ + IN ++
Sbjct: 570 QPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQ 610
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 144/252 (57%), Gaps = 5/252 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
N +++ ++ G + ARA+F+++ ++V+SW ++I+GY Q + A+ +F + +
Sbjct: 166 NALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDG 225
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++ PDE+ +++ALS C +LG ++LG+ IH G V + ++LIDMY+K G+I A
Sbjct: 226 SLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDA 285
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF+ + +++ + WT+MIAG A L +EA+++F M+ + T +LSAC H
Sbjct: 286 RKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHW 345
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + G R+ ++ R IE + +I + + G +Q+A ++ + + + W +
Sbjct: 346 GALAQG-RWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLT-QPDIFSWSA 403
Query: 250 LLAASNIYGDVE 261
+++ + G+ +
Sbjct: 404 VISGLAMNGESD 415
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 9/275 (3%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
D +R LF + + NV SW + Y++ P E I L+ M PD + L
Sbjct: 76 DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLK 135
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--KSV 141
ACA+L + G IH+ + G++ V + NALI ++ G + A VF+ + + V
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDV 195
Query: 142 ITWTTMIAGLALHGLGREALDMF-SRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
++W +MI+G AL +F + + P+E+T ++ LS C +GL++LG++
Sbjct: 196 VSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHG 255
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 260
+ G + +ID+ + G +++A K+ R+P N W S++A Y
Sbjct: 256 LFTGS-GFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIP-HRNTVCWTSMIAG---YAQS 310
Query: 261 ELGECALQHLIKLEPHN-SGNYAILSNIYAILGRW 294
+L + A++ +++ + + A ++ + + G W
Sbjct: 311 DLFKEAIELFREMQIGGFAADAATIACVLSACGHW 345
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 233/358 (65%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ G L +AR +F+ M + + ++W+ +I GY + ++A+ LFR MQ
Sbjct: 183 NTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASG 242
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDE+ M+ L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+
Sbjct: 243 VRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAM 302
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ MK +++++WT++I LA+ G G+EA+ +F M+ A V+P+++ FI +L+AC H G
Sbjct: 303 AVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAG 362
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ G YF M+ YGI+PKIE YGCM+D+ GRAG ++ A + + +MP + N IW +L
Sbjct: 363 MVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTL 422
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+AA +G +ELGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+K
Sbjct: 423 VAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIK 482
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PGCS +E+ VHEF+AGD SHP + +Y ++ ++ +++ A H+ +L+ D
Sbjct: 483 KVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLD 540
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 215/307 (70%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+ D+ NAR +F+ ++E+++ WTT+I+GYAQ NEA+ LF +M VE ++
Sbjct: 165 NGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLE 224
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + LSACAQ G ++LGE IH ++E+ G+ V L AL+ MYAK+G I A ++
Sbjct: 225 PNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKL 284
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++ TW MI GLA+HG +EALD F ++E+ ++ PN+ITF+ +LSACCH GL+
Sbjct: 285 FDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLL 344
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+GR+ F++MK YGIEPKIE YGCM+DLLGR G L EAE+L++ M ++A+ I G+LL
Sbjct: 345 SVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLG 404
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ +G++E+ E ++ ++ LEPHN G Y +LSN+YA GRW + ++RKVM+ +KK
Sbjct: 405 SCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKT 464
Query: 313 PGCSYIE 319
PG S ++
Sbjct: 465 PGWSLVD 471
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
++ GDL+ A LF E N W TLI +A P+EA+ L+ M+ +V P +
Sbjct: 71 SESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFP 130
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L AC+ +++ +H ++ ++GL+ + + N L+ Y+ S + A +VF+ + +
Sbjct: 131 FLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSER 190
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
S+ WTTMI+G A + EAL++F +M ++PN T ++LSAC G ++LG R
Sbjct: 191 SLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIH 250
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
M+ + GIE + ++ + + G + A+KL + E N A W +++ ++G
Sbjct: 251 VFMEEK-GIEVGVILGTALVHMYAKNGAILMAQKLFDTIS-ERNTATWNAMICGLAVHGH 308
Query: 260 VELGECALQHLIKLE 274
+ AL KLE
Sbjct: 309 AKE---ALDRFWKLE 320
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 219/339 (64%), Gaps = 5/339 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W ++V GYA G+L AR LF++M +N +SW ++AGY NEA+ F M +
Sbjct: 226 WTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+E +++ LSACA LGA++ G+WIH YI++ + ++ ALIDMYAK G+I A
Sbjct: 286 VKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCAR 345
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + + ++TWT+MI+GL++HGLG E L FS M KP++IT + +L+ C H G
Sbjct: 346 RVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSG 405
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G F+ M +GI PK+E YGC+IDLLGRAG L+ A + ++ MP E + W +L
Sbjct: 406 LVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRAL 465
Query: 251 LAASNIYGDVELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L+A I+GDV+LGE + H+ +L P + G Y +LSN+YA +G+W K+RK M G
Sbjct: 466 LSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGS 525
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
+ PGCS+IE+ VHEF+A D HP R+ +I K+N
Sbjct: 526 EGCPGCSWIEIDGVVHEFLAADKLHP---RISEINKKLN 561
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 40/281 (14%)
Query: 15 MVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--V 71
++ Y +L+ AR +F+ I W +I Y++ E++ LF +M
Sbjct: 93 LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPT 152
Query: 72 KPDEIAMLAALSACAQLGAVE-LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
D+ +AC++ + GE +H + + G + + + N+L++MY+ ++ A
Sbjct: 153 SADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAK 212
Query: 131 QVFENMKNKSVITWTTMIAGLALHG------------LGR-------------------E 159
+VF+ M + VITWT+++ G A+ G GR E
Sbjct: 213 RVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNE 272
Query: 160 ALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC 217
AL F+ M VKPNE ++ILSAC H+G ++ G+ + I K+R + I
Sbjct: 273 ALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIST--A 330
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G + A ++ + + + W S+++ +++G
Sbjct: 331 LIDMYAKCGRIDCARRVFDGL-HKRDLLTWTSMISGLSMHG 370
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 219/340 (64%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V YA+ G L A +F+ + KN +SW LIAGYA+ + EA+ LF RMQ E +
Sbjct: 214 SSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYR 273
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P E A LS+C+ +G +E G+W+H ++ + + + N L+ MYAKSG I A +V
Sbjct: 274 PTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKV 333
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + V++ +M+ G A HGLG+EA F M R ++PN+ITF+++L+AC H L+
Sbjct: 334 FDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLL 393
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+ YF +M+ +Y IEPK+ Y ++DLLGRAG L +A+ + MP E AIWG+LL
Sbjct: 394 DEGKHYFGLMR-KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLG 452
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ + E+G A Q + +L+P G + +L+NIYA GRW + K+RK+M+D GVKK
Sbjct: 453 ASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKE 512
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++EV VH FVA D +HP ++++++ K+N ++K
Sbjct: 513 PACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIK 552
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 141/229 (61%), Gaps = 7/229 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA+ G L AR LF+ M ++++SWT++I GYAQ D+ ++A+ LF RM + +
Sbjct: 113 NSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + + C + + G IH +YG ++ V + ++L+DMYA+ G +G+A+ V
Sbjct: 173 PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K+ ++W +IAG A G G EAL +F RM+R +P E T+ A+LS+C +G +
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRM 238
E G+ + ++MKS K+ Y ++ + ++G +++AEK+ ++
Sbjct: 293 EQGKWLHAHLMKS----SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+++PD L C QLG ++ G+ +H ++ + + N+L+ MYA+ G + A
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++F+ M ++ +++WT+MI G A + +AL +F RM +PNE T +++ C ++
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GR+ + +YG + ++D+ R GYL EA + ++ + N W +
Sbjct: 189 ASYNCGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK-NEVSWNA 246
Query: 250 LLAASNIYGDVELGECALQHLIKLE 274
L+A G+ GE AL ++++
Sbjct: 247 LIAGYARKGE---GEEALALFVRMQ 268
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 217/338 (64%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y +++A LF+ M E+N ++W LI GY + +AI FR M + +P
Sbjct: 130 LVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPS 189
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E ++ LSAC+ LGA G+WIH +I L V + ALIDMYAK G + + +VFE
Sbjct: 190 ERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++ K+V TW +I+G A++G G AL FSRM KP+E+TF+ +L ACCH GLV
Sbjct: 250 EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTE 309
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR F MK ++G++P+IE YGCM+DLLGRAG L+EA +L++ M E + IW +LL A
Sbjct: 310 GRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCAC 369
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G+ +LGE ++ LI+LEP+N NY +LSNIY+ RW E GK+R +M G++K+PG
Sbjct: 370 RVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPG 429
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IE++ V+EFVA + P+F+ +Y+ L + ++K
Sbjct: 430 CSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLK 467
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
++I Y +++ ++ +F M ++ PD A L A AQL +G+ IH + Q
Sbjct: 59 SMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQM 118
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
G V + AL+ +Y I A Q+F+ M ++ +TW +I G + +A+D F
Sbjct: 119 GFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAF 178
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLL 222
M +P+E T + +LSAC H+G G+ I + Y ++ + +ID+
Sbjct: 179 RGMLADGAQPSERTVVVVLSACSHLGAFNQGKW---IHEFIYHNRLRLNVFVGTALIDMY 235
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ G + E EK+ + E N W L++ + G G+ ALQ ++
Sbjct: 236 AKCGAVYEVEKVFEEIR-EKNVYTWNVLISGYAMNGQ---GDAALQAFSRM 282
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 215/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY G + A++ F M EKN+++WT +I+G AQ +A+ LF +M+++
Sbjct: 362 WNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY 421
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ A A++AC+ LGA+E G +H I G ++ + + NA+I MYA+ G + A
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAART 481
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++W +MIA L HG G +A++++ +M + + P+ TF+ +LSAC H GL
Sbjct: 482 MFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGL 541
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYFN M YGI P + Y MIDL RAG +A+ ++ MPFEA A IW +LL
Sbjct: 542 VEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALL 601
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G+++LG A + L KL P + G Y +LSN+YA LGRWN+ + RK+MRD GVKK
Sbjct: 602 AGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKK 661
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS+ EV +VH F+ DT HP+ +Y L K+N +MK
Sbjct: 662 EPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMK 702
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T++ GY + GDL AR + + MTE+ I+W +I+GY +A+TLFR+M++ V
Sbjct: 226 WTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGV 285
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAKSGKIG 127
+ DE + +SACA G LG+ +H YI + LN ++ + N LI +Y K GK+
Sbjct: 286 QVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVD 345
Query: 128 KALQVFENMKNKSVI-------------------------------TWTTMIAGLALHGL 156
A ++F M K +I TWT MI+GLA +G
Sbjct: 346 GARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGF 405
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
G +AL +F++M+ +PN+ F ++AC +G +E GR+ + G + +
Sbjct: 406 GEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQ-LHAQIVHLGHDSTLSVGN 464
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
MI + R G ++ A + MPF + W S++AA +G
Sbjct: 465 AMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHG 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 49/288 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T++ Y+ +G+L AR +F + ++ + + +I GY+ M+ + AI LFR M+ N
Sbjct: 83 TTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWAN 142
Query: 71 VKPDEIAMLAALSACAQLGAVE--LGEWIHNYIEQYGLNTIVPLNNALIDMYAK------ 122
+PD+ + LSA + E G+ +H + ++G+ + NAL+ +Y K
Sbjct: 143 FQPDDFTFASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPL 201
Query: 123 ----------------------------------SGKIGKALQVFENMKNKSVITWTTMI 148
+G + A ++ + M + I W MI
Sbjct: 202 VSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMI 261
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 207
+G HGL +AL +F +M V+ +E T+ +++SAC G LG++ + I+K+
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELN 321
Query: 208 IEPK--IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + +I L + G + A K+ MP + + W +LL+
Sbjct: 322 PDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSG 368
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 214/339 (63%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y K G + A+ + + + ++ ++SW +IAG+ + +A + F M +VKPD
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPD 579
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L ACA L +V LG+ IH I + L++ V + + L+DMY+K G + + VFE
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
NK +TW MI G A HGLG EAL F RM+ V+PN TF++IL AC H+G ++
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G YFN M + YG+EP+IE Y CMID++GR+G + EA KL++ MPFEA+A IW +LL+
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+G++E+ E A +++LEP +S +LSNIYA G W + ++RK+MR +KK PG
Sbjct: 760 KIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPG 819
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
CS+IEV VH F+ G+ +HP ++ +Y+IL + +MK+
Sbjct: 820 CSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKW 858
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 8/277 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K L+ A +F+ M ++ +SW +IA + Q E + LF M ++
Sbjct: 417 NSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRME 476
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L AC+ A+ G IHN I + GL + ALIDMY K G I +A ++
Sbjct: 477 PDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKI 536
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ ++ +++++W +IAG L +A F M + VKP+ T+ +L AC ++ V
Sbjct: 537 HDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASV 596
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG++ + I+K + + ++D+ + G +Q++ + + P + W +++
Sbjct: 597 GLGKQIHGQIIKLE--LHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMI 653
Query: 252 AASNIYGDVELGECALQHLIKLEPHN-SGNYAILSNI 287
+G LGE AL + +++ N N+A +I
Sbjct: 654 CGYAQHG---LGEEALGYFERMQLENVRPNHATFVSI 687
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 143/277 (51%), Gaps = 7/277 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G L +A+ +F + + ++ + +I G + ++ EA+ F+ + + +EI++
Sbjct: 322 YAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISL 381
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A SACA + G +H+ + L + + + N+++DMY K + +A +F+ M+
Sbjct: 382 SGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMER 441
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++W +IA +G E L++F+ M R R++P++ T+ ++L AC + G
Sbjct: 442 RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEI 501
Query: 199 FN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
N I+KS G++ + G +ID+ + G ++EA+K+ R+ + W +++A +
Sbjct: 502 HNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEAKKIHDRIE-QQTMVSWNAIIAGFTLL 558
Query: 258 GDVELGECALQHLIKL--EPHNSGNYAILSNIYAILG 292
E ++K+ +P N YAI+ + A L
Sbjct: 559 KHSEDAHSFFYEMLKMSVKPDNF-TYAIVLDACANLA 594
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 123/230 (53%), Gaps = 4/230 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
+NTM++GYA G++N A F +++V+SW ++++G+ Q + ++I +F M + E
Sbjct: 112 YNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEE 171
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D+ L AC+ L LG +H I + G V +AL+DMYAK ++ +L
Sbjct: 172 VGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSL 231
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F + K+ + W+ +IAG + L++F M++ + ++ + ++ +C +
Sbjct: 232 KIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLS 291
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+++G + + + +K +G + + +D+ + G L +A+++ +P
Sbjct: 292 ALKVGTQLHAHALKCDFGSDITVGT--ATLDMYAKCGSLADAQRIFNSLP 339
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 22/341 (6%)
Query: 11 FWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
F+ +V G YAK L+++ +F + KN + W+ +IAG Q D+ + LF+
Sbjct: 207 FYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFK 266
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
MQ + + + +CA L A+++G +H + + + + + A +DMYAK G
Sbjct: 267 EMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCG 326
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ A ++F ++ S+ + +I G + G EAL F + ++ + NEI+ S
Sbjct: 327 SLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFS 386
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC + +L R + + + + I ++D+ G+ L EA + M +A
Sbjct: 387 ACASIK-GDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDA 444
Query: 245 AIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI-- 300
W +++AA G+ E L A +++EP + Y + + N +I
Sbjct: 445 VSWNAVIAAHEQNGNEEETLNLFASMLRLRMEP-DQFTYGSVLKACSSQQALNSGMEIHN 503
Query: 301 RKVMRDMGVKKMPG---------CSYIEVSKRVHEFVAGDT 332
R + +G+ G C IE +K++H+ + T
Sbjct: 504 RIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT 544
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ ++ +FE K+ ++W +I GYAQ EA+ F RMQ+ENV+
Sbjct: 619 STLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVR 678
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ ++ L ACA +G ++ G + + + +YGL + + +ID+ +SG+I +AL+
Sbjct: 679 PNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALK 738
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ + M + W T+++ +HG
Sbjct: 739 LIQEMPFEADAVIWRTLLSICKIHG 763
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
+ C+ +++ G+ H + G V ++N L+ MY + + A +VFE M + V
Sbjct: 50 IQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDV 109
Query: 142 ITWTTMIAGLA-------------------------------LHGLGREALDMFSRMERA 170
I++ TMI+G A +G R+++D+F M R+
Sbjct: 110 ISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRS 169
Query: 171 -RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
V ++ TF +L AC + LG + ++ R G + ++D+ + L
Sbjct: 170 EEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI-VRMGFYKDVVTGSALLDMYAKCKRLD 228
Query: 230 EAEKLLRRMPFEANAAIWGSLLAA 253
++ K+ +P + N W +++A
Sbjct: 229 DSLKIFSEIPVK-NWVCWSAIIAG 251
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 220/330 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M++ Y+ G + A A+F + K+ + WT +I G+ + ++ N A+ FR MQ ENV+
Sbjct: 216 TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVR 275
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ LSAC+QLGA+E+G W+H+Y+ ++ + + + NALI+MY++ G I +A V
Sbjct: 276 PNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTV 335
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK++ VIT+ TMI+GL+++G R+A+++F M R++P +TF+ +L+AC H GLV
Sbjct: 336 FDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLV 395
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G F+ M Y +EP+IE YGCM+DLLGR G L+EA L+R M + + G+LL+
Sbjct: 396 DFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLS 455
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++ELGE + L +SG Y +LS++YA G+W E+ ++R M++ G++K
Sbjct: 456 ACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKE 515
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
PGCS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 516 PGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 31/249 (12%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+K ++ A +F+ NV +T LI G+ EAI L+ RM E++ PD M
Sbjct: 92 SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMA 151
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--- 136
+ L AC A+ G +H+ + G ++ + ++++Y K G++G A +VFE M
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 211
Query: 137 ---------------------------KNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
+ K + WT MI G + AL+ F M+
Sbjct: 212 VVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQG 271
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
V+PNE T + +LSAC +G +E+GR + M+ ++ IE + +I++ R G +
Sbjct: 272 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR-KFEIELNLFVGNALINMYSRCGSID 330
Query: 230 EAEKLLRRM 238
EA+ + M
Sbjct: 331 EAQTVFDEM 339
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ +K I A ++F+ N +V +T +I G G EA+ ++SRM + P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 146
Query: 176 EITFIAILSAC-----------CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
+IL AC H ++LG +++ R +++L G+
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR------------IMELYGK 194
Query: 225 AGYLQEAEKLLRRMPFEANAA 245
G L +A ++ MP + A+
Sbjct: 195 CGELGDARRVFEEMPEDVVAS 215
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 222/348 (63%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G++ AR +F+ + +K+V++W +I GYAQ NEAI+LF M+ V
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + LSAC+ +GA+ELG + Y GL V + AL+DMYAK G + KA++V
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F M+ K+V +W +I GLA +G G EA+ F M +KP++ITFI +LSAC H GL
Sbjct: 389 FRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGL 448
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G+R+FN + S + I PKIE Y CM+D L R+G+L+E + ++P + +A + G+LL
Sbjct: 449 VKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALL 508
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+GE + +I+LEP NS NY + S IYA GR ++S K+R +MR+ GV K
Sbjct: 509 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGLMRERGVNK 568
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++E+S +V EF AGD D +YQ+L + +M+ ++ N
Sbjct: 569 TPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPN 616
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
++++ Y+ + D AR +F + ++V+SW ++ Y ++ E + R M + V
Sbjct: 167 HSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAV 226
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ + + G+ T + +AL+ MY K G+I +A +
Sbjct: 227 VPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARR 286
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+++ +K V+ W MI G A +G+ EA+ +F M++A V P++IT +LSAC VG
Sbjct: 287 VFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGA 346
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG R G+ + ++D+ + G L +A ++ R+M + N A W +L+
Sbjct: 347 LELGSELDGYASCR-GLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCK-NVASWNALI 404
Query: 252 AASNIYGDVELGECALQHL 270
G G+ A+QH
Sbjct: 405 CGLAFNGQ---GDEAIQHF 420
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H +E+ LN+ ++LI +Y+ G A +VF + ++ V++W M+ G+
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 158 REALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
E M M + V PN +T +L+AC G + LGR KS G+E
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA-GMETDSLVGS 269
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + + G + EA ++ + + + W +++
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSI-IDKDVVAWNAMI 303
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 217/338 (64%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y +++A LF+ M E+N ++W LI GY + +AI FR M + +P
Sbjct: 130 LVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPS 189
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E ++ LSAC+ LGA G+WIH +I L V + ALIDMYAK G + + +VFE
Sbjct: 190 ERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++ K+V TW +I+G A++G G AL FSRM KP+E+TF+ +L ACCH GLV
Sbjct: 250 EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTE 309
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR F MK ++G++P+IE YGCM+DLLGRAG L+EA +L++ M E + IW +LL A
Sbjct: 310 GRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCAC 369
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
++G+ +LGE ++ LI+LEP+N NY +LSNIY+ RW E GK+R +M G++K+PG
Sbjct: 370 RVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPG 429
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS IE++ V+EFVA + P+F+ +Y+ L + ++K
Sbjct: 430 CSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLK 467
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
++I Y +++ ++ +F M ++ PD A L A AQL +G+ IH + Q
Sbjct: 59 SMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQM 118
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
G V + AL+ +Y I A Q+F+ M ++ +TW +I G + +A+D F
Sbjct: 119 GFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAF 178
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLL 222
M +P+E T + +LSAC H+G G+ I + Y ++ + +ID+
Sbjct: 179 RGMLADGAQPSERTVVVVLSACSHLGAFNQGKW---IHEFIYHNRLRLNVFVGTALIDMY 235
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ G + E EK+ + E N W L++ + G G+ ALQ ++
Sbjct: 236 AKCGAVYEVEKVFEEIR-EKNVYTWNVLISGYAMNGQ---GDAALQAFSRM 282
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 220/345 (63%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K ++ +AR LF+ M E+++++WT +I GYA+ NE++ LF +M+ E V PD
Sbjct: 877 LVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 936
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++AM+ + ACA+LGA+ I +YI++ V L A+IDM+AK G + A ++F+
Sbjct: 937 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 996
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ K+VI+W+ MIA HG GR+ALD+F M R+ + PN+IT +++L AC H GLVE
Sbjct: 997 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 1056
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G R+F+ M Y + ++ Y C++DLLGRAG L EA KL+ M E + +WG+ L A
Sbjct: 1057 GLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGAC 1116
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
+ DV L E A L++L+P N G+Y +LSNIYA GRW + KIR +M +KK+PG
Sbjct: 1117 RTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPG 1176
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
++IEV + H+F GDT+HP +Y++L + +++ ++ +
Sbjct: 1177 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPD 1221
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 219/345 (63%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K ++ +AR LF+ M E+++++WT +I GYA+ + NE++ LF +M+ E V PD
Sbjct: 201 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 260
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++AM+ + ACA+LGA+ I +YI++ V L A+IDMYAK G + A ++F+
Sbjct: 261 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 320
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ K+VI+W+ MIA HG GR+ALD+F M + + P++IT ++L AC H GLVE
Sbjct: 321 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEE 380
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G R+F+ M Y + ++ Y C++DLLGRAG L EA KL++ M E + +WG+ L A
Sbjct: 381 GLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGAC 440
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
+ DV L E A L++L+ N G+Y +LSNIYA GRW + KIR +M +KK PG
Sbjct: 441 RTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPG 500
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
++IEV + H+F GDT+HP +Y++L ++ +++ ++ +
Sbjct: 501 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPD 545
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+ L++A LF+ M ++ +SW+ ++ G+A++ FR + +
Sbjct: 774 NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + AC L +++G IH+ + ++GL+ + AL+DMY K +I A +
Sbjct: 834 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++TWT MI G A G E+L +F +M V P+++ + ++ AC +G +
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 953
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R + ++ R + + MID+ + G ++ A ++ RM E N W +++A
Sbjct: 954 HKARTIDDYIQ-RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIA 1011
Query: 253 ASNIYG 258
A +G
Sbjct: 1012 AYGYHG 1017
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ L++A LF+ M ++ +SW+ ++ G+A++ FR + +
Sbjct: 98 NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 157
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + AC L +++G IH+ + ++GL+ + AL+DMY K +I A +
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ + ++TWT MI G A G E+L +F +M V P+++ + ++ AC +G +
Sbjct: 218 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 277
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R + ++ R + + MID+ + G ++ A ++ RM E N W +++A
Sbjct: 278 HKARIIDDYIQ-RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIA 335
Query: 253 ASNIYG 258
A +G
Sbjct: 336 AYGYHG 341
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H +G+ + + N L+ Y+ + A +F+ M + ++W+ M+ G A G
Sbjct: 757 VHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 816
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
F + R +P+ T ++ AC + +++GR +I+ ++G++ ++ +
Sbjct: 817 YMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV-YKFGLD--LDHFV 873
Query: 217 C--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
C ++D+ G+ +++A L +M E + W ++
Sbjct: 874 CAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGG 911
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++AL C L V +H +G+ + + N LI Y+ + A +F+ M
Sbjct: 66 ISALVNCRNLTQVRQ---VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++W+ M+ G A G F + R +P+ T ++ AC + +++GR
Sbjct: 123 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLI 182
Query: 199 FNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+I+ ++G++ ++ + C ++D+ + +++A L +M E + W ++
Sbjct: 183 HHIV-YKFGLD--LDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIGG 235
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 218/343 (63%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+F N ++ Y+K G + +AR +F+ M +++V+SWTTL+ YA DQ E+ T F++M +
Sbjct: 367 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQ 426
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
VK ++I + L AC+ A++ G+ IH + + GL + + NAL+ MY K G + A
Sbjct: 427 GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++VFE M + V+TW T+I GL +G G EAL + M+ ++PN TF+ +LSAC
Sbjct: 487 IRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVC 546
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LVE GRR F M YGI P + Y CM+D+L RAG+L+EAE ++ +P + +AA+WG+
Sbjct: 547 NLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGA 606
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA I+ +VE+GE A +H +KLEP N+G Y LS IYA G W + K+RK M++ GV
Sbjct: 607 LLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KK PG S+IE++ VH FVA D SHP +Y L + QMK
Sbjct: 667 KKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMK 709
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 146/276 (52%), Gaps = 6/276 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YA G +N AR LF+ + K+V+SW +I+GYA EA LF MQ E ++
Sbjct: 67 NTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLE 126
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ ++ LSAC+ + G IH + + GL + NALI MYAK G + A +V
Sbjct: 127 PDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRV 186
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++ ++WTT+ A G G E+L + M + RV+P+ IT++ +LSAC + +
Sbjct: 187 FDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAAL 246
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ + +I++S Y + ++ + + + G ++A ++ + + + W +++
Sbjct: 247 EKGKQIHAHIVESEYHSDVRVST--ALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMI 303
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
G +E +++ + P + +LS
Sbjct: 304 RGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLS 339
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 2/239 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YAK G + +AR +F+ M ++ +SWTTL YA+ E++ + M E V+
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P I + LSAC L A+E G+ IH +I + ++ V ++ AL MY K G A +V
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + + VI W TMI G G EA F RM V P+ T+ +LSAC G +
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGL 347
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G+ + ++ G+ + +I++ +AG +++A ++ RMP + + W +LL
Sbjct: 348 ARGKE-IHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 125/234 (53%), Gaps = 4/234 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G +AR +FE ++ ++VI+W T+I G+ Q EA F RM E V PD
Sbjct: 275 YMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATY 334
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
LSACA+ G + G+ IH + GL + V NALI+MY+K+G + A QVF+ M
Sbjct: 335 TTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK 394
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ V++WTT++ A E+ F +M + VK N+IT++ +L AC + ++ G+
Sbjct: 395 RDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEI 454
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ ++K+ G+ + ++ + + G +++A ++ M + W +L+
Sbjct: 455 HAEVVKA--GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLI 505
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D + L +C + + +G+ +H +I + G+ V + N L+ +YA G + +A Q+F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ NKSV++W MI+G A GL +EA ++F+ M++ R++P++ TF++ILSAC ++
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR + +M++ G+ +I + + G +++A ++ M + W +L
Sbjct: 147 WGREIHVRVMEA--GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS-WTTLTG 203
Query: 253 ASNIYGDVELGECALQ 268
A Y + GE +L+
Sbjct: 204 A---YAESGYGEESLK 216
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 212/313 (67%), Gaps = 3/313 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV GY G L+ AR LFE ++V+ WT +I GY Q + +AI LF MQ+ V
Sbjct: 278 WTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGV 337
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ ++ L+ CAQLGA+E G+WIHNYI++ + ++ ALI+MYAK G I K+L+
Sbjct: 338 EPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLE 397
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +K+ +WT++I GLA++G EAL++F M+ +KP++ITF+A+LSAC H GL
Sbjct: 398 IFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGL 457
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WG 248
VE GR+ F+ M S Y IEP +E YGC IDLLGRAG LQEAE+L++++P + N I +G
Sbjct: 458 VEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYG 517
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A YG++++GE L K++ +S + +L++IYA RW + K+R M+D+G
Sbjct: 518 ALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLG 577
Query: 309 VKKMPGCSYIEVS 321
+KK+PG S IEV
Sbjct: 578 IKKVPGYSAIEVD 590
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 159/310 (51%), Gaps = 43/310 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+++ YA++G + +FE M E++ +SW +I+GY + + EA+ ++RRMQ+E N
Sbjct: 147 NSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNE 206
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E +++ LSACA L +ELG+ IH+YI L+ + NAL+DMY K G + A +
Sbjct: 207 KPNEATVVSTLSACAVLRNLELGKEIHDYIAN-ELDLTPIMGNALLDMYCKCGCVSVARE 265
Query: 132 VFENMKNKSVITWTTMIAGLALHGL-------------------------------GREA 160
+F+ M K+V WT+M+ G + G +A
Sbjct: 266 IFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDA 325
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMI 219
+ +F M+ V+P++ + +L+ C +G +E G+ N I ++R ++ + +I
Sbjct: 326 IALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVST--ALI 383
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD----VELGECALQHLIKLEP 275
++ + G ++++ ++ + + + W S++ + G +EL E A+Q L+P
Sbjct: 384 EMYAKCGCIEKSLEIFNGLK-DMDTTSWTSIICGLAMNGKTSEALELFE-AMQ-TCGLKP 440
Query: 276 HNSGNYAILS 285
+ A+LS
Sbjct: 441 DDITFVAVLS 450
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
+ +GD N A +F + ++ + +I + + AI+LF++++ V PD
Sbjct: 53 SSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYP 112
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +G V GE IH ++ + GL + N+L+DMYA+ G + QVFE M +
Sbjct: 113 YVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPER 172
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRY 198
++W MI+G EA+D++ RM+ + KPNE T ++ LSAC + +ELG+
Sbjct: 173 DAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEI 232
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + + + P + ++D+ + G + A ++ M + N W S++ I G
Sbjct: 233 HDYIANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDAMIVK-NVNCWTSMVTGYVICG 289
Query: 259 DVE 261
++
Sbjct: 290 QLD 292
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 236/374 (63%), Gaps = 20/374 (5%)
Query: 2 FTLSRLLYKF----------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 51
F L R LY F WN+++AGY + GD + AR +F+ M E+NV +WT ++AG+A
Sbjct: 179 FDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFA 238
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY----GLN 107
Q Q A++LF +M+ V+ D++A++AALSACA+LG + LG+WIH Y+E+ L
Sbjct: 239 QNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLP 298
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+V LNNALI MYA G + A ++FE + ++ ++W+++I G A G G EA+ +F M
Sbjct: 299 VLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLM 358
Query: 168 ---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
+ V+P+EITFI L+AC H GL+ G R F M +G+ P+IE YGCM+DLL R
Sbjct: 359 LCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSR 418
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-IKLEPHN--SGNY 281
AG L EA L+ MP + N A+WG+LL+ ++ + E+ +HL +++P+N +G +
Sbjct: 419 AGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYF 478
Query: 282 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
+L+N+YA GRW ++ +R+ M D+GVKK G S+IE++ + F+ G+ +H D + +Y
Sbjct: 479 MLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIY 538
Query: 342 QILCKINGQMKFAE 355
++L I Q + E
Sbjct: 539 EMLGNITRQTQMGE 552
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y G L +A+ +FE +T + W +I G+ + ++I LF+RM + V+
Sbjct: 63 NHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVE 122
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN--YIEQYGLNTIVPLN----------------- 113
+ LSAC + GE IH + Y N V N
Sbjct: 123 ANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLK 182
Query: 114 -----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
N+L+ Y + G A +VF+ M ++V TWT M+AG A +G
Sbjct: 183 RALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQ 242
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM----KSRYGIEPKI 212
+ AL +F +M RA V+ +++ +A LSAC +G + LG+ + +SR+ + +
Sbjct: 243 CKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRH-LPVLV 301
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+I + G + A KL +P + N W S++
Sbjct: 302 SLNNALIHMYASCGAMDLAYKLFEEIP-QRNTVSWSSIITG 341
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 222/346 (64%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y GD++ +R +F+ + E V+++ +I A+ ++ NEA+ LFR +Q +KP
Sbjct: 152 TLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKP 211
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ ML LS+CA LG+++LG W+H Y+++YG + V +N LIDMYAK G + A+ VF
Sbjct: 212 TDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVF 271
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+M + W+ +I A HG G +A+ M + M++ +V+P+EITF+ IL AC H GLVE
Sbjct: 272 RDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVE 331
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G YF+ M + YGI P I+ YGCM+DLLGRAG L EA K + +P + +W +LL+A
Sbjct: 332 EGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSA 391
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ +G+VE+G+ ++ + +L+ + G+Y I SN+ A G+W++ +RK M D G K+P
Sbjct: 392 CSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIP 451
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IEV+ VHEF AG+ H L++ L ++ ++K A ++ +
Sbjct: 452 GCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPD 497
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 177/400 (44%), Gaps = 64/400 (16%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
+ ++ KF N + K + +A LF+ +T+ N++ + T+ GYA+++ P IT FR
Sbjct: 58 TNVITKFINFCTSNPTK-ASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFR 116
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
R L +++ A+ G+ +H + + G++ + + LI+MY G
Sbjct: 117 R---------------CLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACG 161
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I + +VF+ + V+ + +I LA + EAL +F ++ +KP ++T + +LS
Sbjct: 162 DIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLS 221
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
+C +G ++LGR +K +YG + ++ +ID+ + G L +A + R MP + +
Sbjct: 222 SCALLGSLDLGRWMHEYVK-KYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP-KRDT 279
Query: 245 AIWGSLLAASNIYGD---------------VELGECALQHLIKLEPHN------------ 277
W +++ A +GD V+ E ++ HN
Sbjct: 280 QAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHG 339
Query: 278 -SGNYAILSNI------YAILGRWNESGKIRKVMRDMGVKKMP--------GCSY---IE 319
+ Y I+ +I +LGR + K + ++ +K P CS +E
Sbjct: 340 MTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVE 399
Query: 320 VSKRVHEFVAG-DTSHPDFDRLYQILCKINGQMKFAEHLQ 358
+ KRV E + D SH ++ LC G+ HL+
Sbjct: 400 MGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLR 439
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 227/357 (63%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
NT++ YAK G ++ +F+ M EK+ ISW ++IA YAQ EA+ +F M + V
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + + A L ACA GA+ G+ IH+ + + L V + ++IDMY K G++ A +
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ MK K+V +WT M+AG +HG +EALD+F +M RA VKPN ITF+++L+AC H GL
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 1469
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +FN MK +Y IEP IE YGCM+DL GRAG L EA L++RM + + +WGSLL
Sbjct: 1470 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V+LGE A Q L +L+P N G Y +LSN+YA GRW + ++R +M++ + K
Sbjct: 1530 GACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVK 1589
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S +E+ RVH F+ GD HP + +Y+ L K+ +++ ++ N S + + D
Sbjct: 1590 PPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVD 1646
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 147/233 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+++G GDL AR +F+ + KNV+SWT +I GY + QP EA+ LF+RMQ EN+
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E M++ + AC ++G + LG IH+Y + + V L ALIDMY+K G I A++
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M KS+ TW +MI L +HGLG+EAL++FS MER VKP+ ITFI +L AC H+
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
V+ G YF M YGI P E Y CM +L R+ L EA K + + AN+
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANS 426
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 144/255 (56%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR-----RMQ 67
+ ++ Y+K G L +ARALF+ + +NV+SWT++I GY Q +Q + A+ LF+ +
Sbjct: 1181 SALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETE 1240
Query: 68 VE---NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
VE NV D + M++ LSAC+++ + E +H ++ + G + + + N L+D YAK G
Sbjct: 1241 VEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG 1300
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 183
+ + +VF+ M+ K I+W +MIA A GL EAL++F M R V+ N +T A+L
Sbjct: 1301 QPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 1360
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC H G + G+ + + + +E + +ID+ + G ++ A+K RM E N
Sbjct: 1361 LACAHAGALRAGKCIHDQV-IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKN 1418
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 1419 VKSWTAMVAGYGMHG 1433
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 36/296 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+ G + A LF + +W +I +A+ L++ M + + D+
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTF 128
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ AC +++LG+ +H + +YG + V + N LID Y K G AL+VFE M+
Sbjct: 129 PFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV 188
Query: 139 KSVITWTTMIAGL--------------------------ALHGLGR-----EALDMFSRM 167
++V++WTT+I+GL ++G R EAL++F RM
Sbjct: 189 RNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM 248
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ + PNE T ++++ AC +G++ LGR + + IE + +ID+ + G
Sbjct: 249 QAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-YAIKNCIEIGVYLGTALIDMYSKCGS 307
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 283
+++A ++ MP + W S++ + ++G LG+ AL ++E N AI
Sbjct: 308 IKDAIEVFETMP-RKSLPTWNSMITSLGVHG---LGQEALNLFSEMERVNVKPDAI 359
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 22/298 (7%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N A ++ + + NV SW ++IA A+ EA+ F ++ + P + + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+ L + G H +G T + +++ALIDMY+K G++ A +F+ + ++V++WT
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 146 TMIAGLALHGLGREALDMF-------SRMERARVKP-NEITFIAILSACCHV---GLVEL 194
+MI G + AL +F + +E P + + +++LSAC V G+ E
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE- 1271
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G F + K G + I ++D + G ++K+ M E + W S++A
Sbjct: 1272 GVHGFVVKK---GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME-EKDDISWNSMIA-- 1325
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR--KVMRDMGVK 310
+Y L AL+ + H Y ++ + A+L +G +R K + D +K
Sbjct: 1326 -VYAQSGLSGEALEVFHGMVRHVGVRYNAVT-LSAVLLACAHAGALRAGKCIHDQVIK 1381
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH I + GL+ L LI +Y+ G+I A+ +F ++N TW +I ++GL
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL ++ M + ++ TF ++ AC + ++LG+ + +YG +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFSGDVFVQN 164
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ID + G+ + A K+ +M N W ++++ GD++
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQ 208
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 208/309 (67%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G+L AR LF+ M++++VISWT +I Y+Q Q EA+ LF+ M V
Sbjct: 247 WNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKV 306
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDEI + + LSACA G++++GE H+YI++Y + + + NALIDMY K G + KAL+
Sbjct: 307 KPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALE 366
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ K ++WT++I+GLA++G ALD FSRM R V+P+ F+ IL AC H GL
Sbjct: 367 VFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGL 426
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M+ YG++P+++ YGC++DLL R+G LQ A + ++ MP + IW LL
Sbjct: 427 VDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILL 486
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+AS ++G++ L E A + L++L+P NSGNY + SN YA RW ++ K+R++M V+K
Sbjct: 487 SASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQK 546
Query: 312 MPGCSYIEV 320
G S IE+
Sbjct: 547 PSGSSCIEM 555
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 36/292 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y G L A+ +F+ M E++++SW +L+ GY Q + E + +F M+V VK
Sbjct: 116 NALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVK 175
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------- 119
D + M+ + AC LG + + + +YIE+ + V L N LIDM
Sbjct: 176 GDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGV 235
Query: 120 ------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
Y K+G + A ++F+ M + VI+WT MI + G EAL
Sbjct: 236 FDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEAL 295
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M ++VKP+EIT ++LSAC H G +++G + ++ +Y ++ I +ID+
Sbjct: 296 RLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQ-KYDVKADIYVGNALIDM 354
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ G +++A ++ + M + ++ W S+++ + G + AL + ++
Sbjct: 355 YCKCGVVEKALEVFKEMR-KKDSVSWTSIISGLAVNG---FADSALDYFSRM 402
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A LF+ + + W +I G++ DQPNEAI ++ M + + + + L ACA+
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
+ V G IH + + G + + ++NALI+MY G +G A +VF+ M + +++W ++
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
+ G RE L +F M A VK + +T + ++ AC +G + + ++
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEEN-N 208
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+E + +ID+ GR G + A + +M + N W +++ YG A
Sbjct: 209 VEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIMG---YGKAGNLVAAR 264
Query: 268 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 317
+ + + ++ + Y+ G++ E+ ++ K M + VK + C++
Sbjct: 265 ELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTG 324
Query: 318 -IEVSKRVHEFV 328
++V + H+++
Sbjct: 325 SLDVGEAAHDYI 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 116 LIDMYAKS-GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
LI YA S I KA +F+ + ++ W MI G ++ EA+ M++ M R +
Sbjct: 16 LIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLG 75
Query: 175 NEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
N +T++ + AC V V G + ++K G E + +I++ G G+L A+K
Sbjct: 76 NNLTYLFLFKACARVPDVSCGSTIHARVLK--LGFESHLYVSNALINMYGSCGHLGLAQK 133
Query: 234 LLRRMPFEANAAIWGSLLAA 253
+ MP E + W SL+
Sbjct: 134 VFDEMP-ERDLVSWNSLVCG 152
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 210/329 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + YAK G L + R +F M ++++ISWT+L+ Y+Q + ++AI +F M+ E +
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + L +CA L +E G+ +H I + GL+ + +AL+DMYAK G +G A +V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N ++WT +IAG A HG+ +AL +F RM + V+PN +TF+ +L AC H GLV
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +YF +MK YG+ P++E Y C++DLL R G+L +A + + RMP E N +W +LL
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+VELGE A Q ++ + NS Y +LSN Y G + + +R VM++ GVKK
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKE 714
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS+I V+ +H+F AGD HP+ D++Y
Sbjct: 715 PGCSWISVNGTLHKFYAGDQQHPEKDKIY 743
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 19/255 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y+K D++ A LF+ M+++N SWT LIAG A+ + F MQ + +
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ A L C L ++ELG +H I G + ++ AL++MYAK +I + +V
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKV 228
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +V++W MI G + L +A D+F RM V P+ TFI + A +G++
Sbjct: 229 FNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA---IGML 285
Query: 193 ELGRRYFNIMK--SRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLR------RMPF 240
R N K S Y +E ++ +ID+ + G LQEA + R
Sbjct: 286 ----RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 241 EANAAIWGSLLAASN 255
NA I G L + N
Sbjct: 342 PWNAMISGYLRSGFN 356
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 20 AKVGDLNNARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
+K G L AR++F +T + W +I+GY + +A+ LF +M ++ D
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENM 136
+ +A A L + LG+ +H + GL V ++NA+ + YAK G + +VF M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+++ +I+WT+++ + +A+++FS M + PN+ TF ++L +C ++ L+E G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
+ I+ + G++ ++D+ + G L +A+K+ R+ A+ W +++A
Sbjct: 498 QVHGII-CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQ 555
Query: 257 YGDVELGECALQHLIKL--EPH 276
+G V+ + +++L EP+
Sbjct: 556 HGIVDDALQLFRRMVQLGVEPN 577
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 82 LSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L C ++ + +H ++ ++ + + L N + Y+K I A ++F+ M +
Sbjct: 75 LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQR 134
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+ +WT +IAGLA +GL + + F M+ + P++ + IL C + +ELG
Sbjct: 135 NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG---- 190
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE---KLLRRMPFEANAAIWGSLL---AA 253
N++ ++ I LL LQE E K+ M E N W +++ +
Sbjct: 191 NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNAMITGFTS 249
Query: 254 SNIYGD 259
+++Y D
Sbjct: 250 NDLYLD 255
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 215/307 (70%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+ D+ NAR +F+ ++E+++ WTT+I+GYAQ NEA+ LF +M VE ++
Sbjct: 167 NGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLE 226
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + LSACAQ G ++LGE IH ++E+ G+ V L AL+ MYAK+G I A ++
Sbjct: 227 PNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKL 286
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++ TW MI GLA+HG +EALD F ++E+ ++ PN+ITF+ +LSACCH GL+
Sbjct: 287 FDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLL 346
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+GR+ F++MK YGIEPKIE YGCM+DLLGR G L EAE+L++ M ++A+ I G+LL
Sbjct: 347 SVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLG 406
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ +G++E+ E ++ ++ LEPHN G Y +LSN+YA GRW + ++RKVM+ +KK
Sbjct: 407 SCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKT 466
Query: 313 PGCSYIE 319
PG S ++
Sbjct: 467 PGWSLVD 473
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
++ GDL+ A LF E N W TLI +A P+EA+ L+ M+ +V P +
Sbjct: 73 SESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFP 132
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L AC+ +++ +H ++ ++GL+ + + N L+ Y+ S + A +VF+ + +
Sbjct: 133 FLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSER 192
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
S+ WTTMI+G A + EAL++F +M ++PN T ++LSAC G ++LG R
Sbjct: 193 SLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIH 252
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
M+ + GIE + ++ + + G + A+KL + E N A W +++ ++G
Sbjct: 253 VFMEEK-GIEVGVILGTALVHMYAKNGAILMAQKLFDXIS-ERNTATWNAMICGLAVHGH 310
Query: 260 VELGECALQHLIKLE 274
+ AL KLE
Sbjct: 311 AKE---ALDRFWKLE 322
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 235/361 (65%), Gaps = 1/361 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++ L +A LF+ KN+I+W ++++GY MD+ EA LFR M + ++
Sbjct: 369 NALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIE 428
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + + L CA++ ++ G+ H YI + G + L N+L+DMYA+SGK+ +A +
Sbjct: 429 PNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKR 488
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ + +T+T++IAG + G GREAL +F M++ +KP+ +T +A+LSAC H GL
Sbjct: 489 LFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGL 548
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G + F +M S YGI P++E + CM+DL GRAG L +A++++ RMP+ ++A+W +LL
Sbjct: 549 VTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLL 608
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+ E+GE A + L+++ P NSG Y +++N+YA G W++ K+R MRD+GV+K
Sbjct: 609 GACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRK 668
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVAS 371
PGC++++V F+ DTS P ++LY +L + MK AE++ E G ++ + +
Sbjct: 669 APGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDDVIEA 728
Query: 372 M 372
+
Sbjct: 729 I 729
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 36/282 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V+ YAK G+L+ AR LFE M E++ +SW T+I+GYA EA LF +M+VE ++
Sbjct: 233 NSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIE 292
Query: 73 -----------------------------------PDEIAMLAALSACAQLGAVELGEWI 97
D +A + L AC+ +GA++LG I
Sbjct: 293 LNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREI 352
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H + + + + NALI MY++ + A +F++ + K++ITW +M++G
Sbjct: 353 HGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRS 412
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA +F M + ++PN +T +IL C V ++ G+ + + R G + + +
Sbjct: 413 EEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNS 472
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++D+ R+G + EA++L + + + SL+A I G+
Sbjct: 473 LVDMYARSGKVLEAKRLFDSIS-RRDEVTYTSLIAGYGIQGE 513
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 45/317 (14%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y L +A + E + + W LI+ Y + EA++ +++M + ++PD
Sbjct: 134 LVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPD 193
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + L AC + + G+ +H I L + ++N+L+ MYAK+G++ A +FE
Sbjct: 194 KFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFE 253
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI------------ 182
NM + ++W TMI+G A G+ +EA ++F +M ++ N IT+ I
Sbjct: 254 NMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEE 313
Query: 183 -----------------------LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
L AC H+G ++LGR + + ++S Y ++ +
Sbjct: 314 ALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKN--AL 371
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI--KLEPH 276
I + R YL+ A L + + N W S+L+ E + ++ +EP
Sbjct: 372 ITMYSRCKYLRHAYNLFQSTRTK-NIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEP- 429
Query: 277 NSGNYAILSNIYAILGR 293
NY +++I + R
Sbjct: 430 ---NYVTIASILPLCAR 443
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN++V YA+ G + A+ LF+ ++ ++ +++T+LIAGY + EA+ LF M+ +
Sbjct: 469 LWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRH 528
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKA 129
+KPD + M+A LSAC+ G V G + + YG+ + ++D++ ++G + KA
Sbjct: 529 IKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKA 588
Query: 130 LQVFENMKNK-SVITWTTMIAGLALHG 155
++ M + S W T++ +HG
Sbjct: 589 KEMITRMPYRPSSAMWATLLGACRIHG 615
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
L ++ G+ +H I G + L+ Y + A + EN + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSR 205
+I+ +GL EAL + +M ++P++ T+ ++L AC + G++ + +I S
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + + ++ + + G L A L M E + W ++++
Sbjct: 225 LGWNLFV--HNSLVSMYAKTGELSTARCLFENM-LERDDVSWNTMISG 269
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 209/330 (63%), Gaps = 1/330 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+AGYA G LF+ M NV +W +IA Y Q EAI+ F +M++EN
Sbjct: 215 WGTMMAGYAHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENF 273
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + ++ L A A L A G H I Q G + + N+LIDMYAK G++ + +
Sbjct: 274 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 333
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC H GL
Sbjct: 334 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 393
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +WG+LL
Sbjct: 394 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ ++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+G+KK
Sbjct: 454 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 513
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS++E+ +VH F GD SHP + ++
Sbjct: 514 TPGCSWVELKNKVHAFRVGDKSHPQLESMH 543
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 105/292 (35%), Gaps = 97/292 (33%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR++F+ + I W ++I Y + Q NEA+ ++ M
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM--------------------- 140
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
+E+ GL V + L+DMY+K G + +A +VF+ M + V+ W M
Sbjct: 141 -------------VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187
Query: 148 IAGL-------------------------------ALHGLGREALDMFSRMERARV---- 172
IAGL A +G E L++F +M+ V
Sbjct: 188 IAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNV 247
Query: 173 --------------------------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
PN +TF+++L A ++ G F+ +
Sbjct: 248 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQM 306
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G +ID+ + G L +EKL M + + W ++L+ ++G
Sbjct: 307 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHG 357
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 220/345 (63%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K ++ +AR LF+ M E+++++WT +I GYA+ NE++ LF +M+ E V PD
Sbjct: 273 LVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 332
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++AM+ + ACA+LGA+ I +YI++ V L A+IDM+AK G + A ++F+
Sbjct: 333 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ K+VI+W+ MIA HG GR+ALD+F M R+ + PN+IT +++L AC H GLVE
Sbjct: 393 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 452
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G R+F++M Y + ++ Y C++DLLGRAG L EA KL+ M E + +WG+ L A
Sbjct: 453 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 512
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
+ DV L E A L++L+P N G+Y +LSNIYA GRW + K R +M +KK+PG
Sbjct: 513 RTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 572
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
++IEV + H+F GDT+HP +Y++L + +++ ++ +
Sbjct: 573 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPD 617
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 150/241 (62%), Gaps = 6/241 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K ++ +AR LF+ M E+++++WT +I GYA+ + NE++ LF +M+ E V PD
Sbjct: 71 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 130
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++AM+ + ACA+LGA+ I +YI++ V L A+IDMYAK G + A ++F+
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 190
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ K+VI+W+ MIA HG GR+ALD+F M + + P++IT ++L AC + +++
Sbjct: 191 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 195 GRRYFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR +I+ ++G++ ++ + C ++D+ G+ +++A L +MP E + W ++
Sbjct: 251 GRLIHHIV-YKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIG 306
Query: 253 A 253
Sbjct: 307 G 307
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ YAK G + +AR +F+ M EKNVISW+ +IA Y Q +A+ LFR M +
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 229
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + + L AC+ L +++G IH+ + ++GL+ + AL+DMY K +I A +
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++TWT MI G A G E+L +F +M V P+++ + ++ AC +G +
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 349
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R + ++ R + + MID+ + G ++ A ++ RM E N W +++A
Sbjct: 350 HKARTIDDYIQ-RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIA 407
Query: 253 ASNIYG 258
A +G
Sbjct: 408 AYGYHG 413
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
++ G+A++ FR + +PD + + AC L +++G IH+ + ++G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L+ + AL+DMY K +I A +F+ M+ + ++TWT MI G A G E+L +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+M V P+++ + ++ AC +G + R + ++ R + + MID+ +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ-RKKFQLDVILGTAMIDMYAKC 179
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G ++ A ++ RM E N W +++AA +G
Sbjct: 180 GCVESAREIFDRME-EKNVISWSAMIAAYGYHG 211
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 224/356 (62%), Gaps = 8/356 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALF-EL-------MTEKNVISWTTLIAGYAQMDQPNEAITLF 63
WN +++ YA +G + A A+F +L M NV+SW+ +I G+A Q EA+ LF
Sbjct: 1178 WNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELF 1237
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
RRMQ+ VK + + + + LS CA+L A+ LG IH ++ + ++ + + N LI+MY KS
Sbjct: 1238 RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKS 1297
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + VFE ++NK +I+W TM+AG +HGLG A+ F +M + +P+ +TF+A+L
Sbjct: 1298 GSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVL 1357
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC H GLV GR F+ M + +EP++E Y CM+DLLGRAG LQEA K+++ MP E N
Sbjct: 1358 SACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPN 1417
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
A +WG+LL + ++ + E+ E + L +G+Y +LSNIYA GRW +S K+R
Sbjct: 1418 ACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRIS 1477
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+ G+KK PG S+I+V K+V+ F AG+T H + + +Y+IL + QM+ ++ +
Sbjct: 1478 AKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 1533
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 55/323 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WNTMV+GYA D + A +F +M E N+++WT+L++ +A+ Q E + LF RM+
Sbjct: 1042 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 1101
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ + A+ LS L A + G+ IH Y+ + G + + N+LI +Y K G +
Sbjct: 1102 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 1161
Query: 128 KALQVFENMKNK---------------------------------------SVITWTTMI 148
A +F +K K +V++W+ +I
Sbjct: 1162 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 1221
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 207
G A G G EAL++F RM+ A+VK N +T ++LS C + + LGR + ++++S
Sbjct: 1222 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL-- 1279
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
++ I +I++ ++G +E + ++ + W +++A I+G LGE A+
Sbjct: 1280 MDGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHG---LGENAI 1335
Query: 268 Q---HLIK--LEPHNSGNYAILS 285
+ +IK EP A+LS
Sbjct: 1336 RTFDQMIKDGFEPDGVTFVAVLS 1358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+V+ YA G +++A+ +FE+ + N++ W +++ EA+ ++ RM+ V
Sbjct: 910 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 969
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + ACA +G+ +L +H ++ + G + + N L+ MY K G++ A +
Sbjct: 970 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 1029
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M +S ++W TM++G AL+ A +MF M A ++PN +T+ ++LS+ G
Sbjct: 1030 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 1088
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 143
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 881 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 940
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 941 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 999
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 1000 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVS 1047
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 227/357 (63%), Gaps = 1/357 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
NT++ YAK G ++ +F+ M EK+ ISW ++IA YAQ EA+ +F M + V
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 2222
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + + A L ACA GA+ G+ IH+ + + L V + ++IDMY K G++ A +
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ MK K+V +WT M+AG +HG +EALD+F +M RA VKPN ITF+++L+AC H GL
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 2342
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +FN MK +Y IEP IE YGCM+DL GRAG L EA L++RM + + +WGSLL
Sbjct: 2343 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V+LGE A Q L +L+P N G Y +LSN+YA GRW + ++R +M++ + K
Sbjct: 2403 GACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVK 2462
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S +E+ RVH F+ GD HP + +Y+ L K+ +++ ++ N S + + D
Sbjct: 2463 PPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVD 2519
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 155/260 (59%), Gaps = 9/260 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+++G GDL AR +F+ + KNV+SWT +I GY + QP EA+ LF+RMQ EN+
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E M++ + AC ++G + LG IH+Y + + V L ALIDMY+K G I A++
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M KS+ TW +MI L +HGLG+EAL++FS MER VKP+ ITFI +L AC H+
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M YGI P E Y CM +L R+ L EA K + + GSL
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV---------GSLA 424
Query: 252 AASNIYGDVELGECALQHLI 271
+ +I D + A L+
Sbjct: 425 NSPSICFDARAKQVAWTQLL 444
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 144/255 (56%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR-----RMQ 67
+ ++ Y+K G L +ARALF+ + +NV+SWT++I GY Q +Q + A+ LF+ +
Sbjct: 2054 SALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETE 2113
Query: 68 VE---NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
VE NV D + M++ LSAC+++ + E +H ++ + G + + + N L+D YAK G
Sbjct: 2114 VEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG 2173
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 183
+ + +VF+ M+ K I+W +MIA A GL EAL++F M R V+ N +T A+L
Sbjct: 2174 QPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 2233
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC H G + G+ + + + +E + +ID+ + G ++ A+K RM E N
Sbjct: 2234 LACAHAGALRAGKCIHDQV-IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKN 2291
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 2292 VKSWTAMVAGYGMHG 2306
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 44/300 (14%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+ G + A LF + +W +I +A+ L++ M + + D+
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTF 128
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ AC +++LG+ +H + +YG + V + N LID Y K G AL+VFE M+
Sbjct: 129 PFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV 188
Query: 139 KSVITWTTMIAGL--------------------------ALHGLGR-----EALDMFSRM 167
++V++WTT+I+GL ++G R EAL++F RM
Sbjct: 189 RNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM 248
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLG 223
+ + PNE T ++++ AC +G++ LGR + Y I+ IE +ID+
Sbjct: 249 QAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-----YAIKNCIEIGVYLGTALIDMYS 303
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 283
+ G +++A ++ MP + W S++ + ++G LG+ AL ++E N AI
Sbjct: 304 KCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG---LGQEALNLFSEMERVNVKPDAI 359
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 142/333 (42%), Gaps = 53/333 (15%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N A ++ + + NV SW ++IA A+ EA+ F ++ + P + + +C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+ L + G H +G T + +++ALIDMY+K G++ A +F+ + ++V++WT
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 146 TMIAGLALHGLGREALDMF-------SRMERARVKP-NEITFIAILSACCHV---GLVE- 193
+MI G + AL +F + +E P + + +++LSAC V G+ E
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 194 -------------------------------LGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+ ++ F+ M+ + I + MI +
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDI-----SWNSMIAVY 2200
Query: 223 GRAGYLQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE-PHN 277
++G EA ++R + NA ++L A G + G+C +IK++ +N
Sbjct: 2201 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 2260
Query: 278 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ ++Y GR + K M++ VK
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH I + GL+ L LI +Y+ G+I A+ +F ++N TW +I ++GL
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL ++ M + ++ TF ++ AC + ++LG+ + +YG +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFSGDVFVQN 164
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ID + G+ + A K+ +M N W ++++ GD++
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQ 208
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 231/376 (61%), Gaps = 9/376 (2%)
Query: 2 FTLSRLLYKF--------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F +RL++ + WNTM+ GY + G +N A LF+ M +++ISWT ++ G+ +
Sbjct: 72 FRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKK 131
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
EA++ FR MQ+ VKPD +A++AAL+AC LGA+ G WIH Y+ V ++
Sbjct: 132 GFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVS 191
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N+LID+Y + G + A QVF+ M+ ++V++W ++I G A +G E+L F +M+ K
Sbjct: 192 NSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFK 251
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+ +TF L+AC HVGLVE G RYF MK Y I P+IE YGC++DL RAG L++A K
Sbjct: 252 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALK 311
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
+++ MP + N + GSLLAA +G + L E ++HL L + NY ILSN+YA G
Sbjct: 312 VVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADG 371
Query: 293 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+W + K+R+ M+ +G+KK PG S IE+ + H F+AGD++H + + +IL ++ ++
Sbjct: 372 KWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIREILGLMSSDLR 431
Query: 353 FAEHLQNEFSGVLESD 368
+ +G L +D
Sbjct: 432 LQGCVVETLAGDLLND 447
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 42/228 (18%)
Query: 63 FRRMQVENVKPDEIAMLAALSACAQL--GAVELGEWIHNYIEQYGLN-TIVPLNNALIDM 119
F M+ V+P+ I +A LS C G+ LG+ +H Y + GL+ T V + A++ M
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIA------------------------------ 149
Y+K G+ KA +F+ M++K+ +TW TMI
Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMV 125
Query: 150 -GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSR 205
G G EAL F M+ + VKP+ + IA L+AC ++G + G RY +M
Sbjct: 126 NGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRY--VMSQD 183
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ ++ +IDL R G ++ A ++ +M + W S++
Sbjct: 184 FKNNVRVSN--SLIDLYCRCGCVEFARQVFDKME-KRTVVSWNSVIVG 228
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 210/323 (65%), Gaps = 2/323 (0%)
Query: 1 MFTLSRLLYKF-WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
+F + L +F WN+M+AGY K G + +A+ LF +M +K+ +SWTT+I+G Q DQ +EA
Sbjct: 323 LFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEA 382
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+T+F MQ + +KPDE+ +++ +SAC + ++E G+ +H YI ++ V L +LIDM
Sbjct: 383 LTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDM 442
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEIT 178
Y K G + AL+VF+ M+ + W +I GLA++GL ++LDMFS ME + PNEIT
Sbjct: 443 YMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEIT 502
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F +LSAC H GLVE G+ +F +M+ +Y I P I YGCM+DLLGRAGY++EAE L+ M
Sbjct: 503 FTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESM 562
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P + WG+LL + +GD E+GE + L+ L+PH+ G + +LSNIYA G W
Sbjct: 563 PMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVK 622
Query: 299 KIRKVMRDMGVKKMPGCSYIEVS 321
+R M+ V K+PG S +E S
Sbjct: 623 DLRGSMKQWHVPKIPGSSVVESS 645
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 35/271 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++MV+ + + G ++ AR +F+ + K+V +WT +I+ + + + EA+ LF M+ E
Sbjct: 204 SSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWP 263
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
DE M+ ++ACA+L GE H + GL + + + NALI MY+
Sbjct: 264 VDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRL 323
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
K+G + A ++F M +K ++WTTMI+G + EAL
Sbjct: 324 FDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEAL 383
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMID 220
+F+ M+ +KP+E+T ++++SAC ++ +E G+ I + +Y I + +ID
Sbjct: 384 TIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTS--LID 441
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ + G L+ A ++ M E W +++
Sbjct: 442 MYMKCGCLESALEVFDTME-ERGTPCWNAVI 471
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 70/270 (25%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y+ G L +AR +F+ + +SW T++A Y Q + ++A+ +F RM
Sbjct: 142 NALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARM------ 195
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ A AA+S +++ ++ + G + +A +V
Sbjct: 196 PERGA--AAVS-------------------------------SMVSLFGRRGMVDEARKV 222
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC------ 186
F+ ++ K V TWT MI+ +G EAL +FS M +E + +++AC
Sbjct: 223 FDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVT 282
Query: 187 -----CH---------------VGLVELGRRYFNIMKSRYGIEPK--IEQYG--CMIDLL 222
CH L+ + + N++ +R + ++Q+ MI
Sbjct: 283 RNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGY 342
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +++A++L MP + N + W ++++
Sbjct: 343 LKNGSVKDAKELFTVMPDKDNVS-WTTMIS 371
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
L ++ N S ++ + P+ + L+ M + PD +ACA A
Sbjct: 62 LLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRA 118
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
+E G +H + ++G + L NAL+ MY+ G +G A +VF+ ++W T++A
Sbjct: 119 IEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAA 178
Query: 151 LALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
+A+ +F+RM ER + +++S G+V+ R+ F+ G+E
Sbjct: 179 YVQAEDVDQAVGVFARMPERGAAAVS-----SMVSLFGRRGMVDEARKVFD------GVE 227
Query: 210 PK-IEQYGCMIDLLGRAGYLQEAEKLLRRM 238
K + + MI R G EA L M
Sbjct: 228 RKDVFTWTAMISCFQRNGKFAEALALFSDM 257
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 210/323 (65%), Gaps = 2/323 (0%)
Query: 1 MFTLSRLLYKF-WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
+F + L +F WN+M+AGY K G + +A+ LF +M +K+ +SWTT+I+G Q DQ +EA
Sbjct: 323 LFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEA 382
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+T+F MQ + +KPDE+ +++ +SAC + ++E G+ +H YI ++ V L +LIDM
Sbjct: 383 LTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDM 442
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEIT 178
Y K G + AL+VF+ M+ + W +I GLA++GL ++LDMFS ME + PNEIT
Sbjct: 443 YMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEIT 502
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F +LSAC H GLVE G+ +F +M+ +Y I P I YGCM+DLLGRAGY++EAE L+ M
Sbjct: 503 FTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESM 562
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P + WG+LL + +GD E+GE + L+ L+PH+ G + +LSNIYA G W
Sbjct: 563 PMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVK 622
Query: 299 KIRKVMRDMGVKKMPGCSYIEVS 321
+R M+ V K+PG S +E S
Sbjct: 623 DLRGSMKQWHVPKIPGSSVVESS 645
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 35/271 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++MV+ + + G ++ AR +F+++ K+V +WT +I+ + + + EA+ LF M+ E
Sbjct: 204 SSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWP 263
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
DE M+ ++ACA+L GE H + GL + + + NALI MY+
Sbjct: 264 VDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRL 323
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
K+G + A ++F M +K ++WTTMI+G + EAL
Sbjct: 324 FDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEAL 383
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMID 220
+F+ M+ +KP+E+T ++++SAC ++ +E G+ I + +Y I + +ID
Sbjct: 384 TIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTS--LID 441
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ + G L+ A ++ M E W +++
Sbjct: 442 MYMKCGCLESALEVFDTME-ERGTPCWNAVI 471
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 70/270 (25%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y+ G L +AR +F+ + +SW T++A Y Q + ++A+ +F RM
Sbjct: 142 NALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARM------ 195
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ A AA+S +++ ++ + G + +A +V
Sbjct: 196 PERGA--AAVS-------------------------------SMVSLFGRRGMVDEARKV 222
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC------ 186
F+ ++ K V TWT MI+ +G EAL +FS M +E + +++AC
Sbjct: 223 FDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVT 282
Query: 187 -----CH---------------VGLVELGRRYFNIMKSRYGIEPK--IEQYG--CMIDLL 222
CH L+ + + N++ +R + ++Q+ MI
Sbjct: 283 RNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGY 342
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +++A++L MP + N + W ++++
Sbjct: 343 LKNGSVKDAKELFTVMPDKDNVS-WTTMIS 371
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 90
L ++ N S ++ + P+ + L+ M + PD +ACA A
Sbjct: 62 LLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRA 118
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
+E G +H + ++G + L NAL+ MY+ G +G A +VF+ ++W T++A
Sbjct: 119 IEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAA 178
Query: 151 LALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
+A+ +F+RM ER + +++S G+V+ R+ F++++ +
Sbjct: 179 YVQAEDVDQAVGVFARMPERGAAAVS-----SMVSLFGRRGMVDEARKVFDVVERK---- 229
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ + MI R G EA L M
Sbjct: 230 -DVFTWTAMISCFQRNGKFAEALALFSDM 257
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 223/348 (64%), Gaps = 11/348 (3%)
Query: 19 YAKVGD-LNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEI 76
Y+K G +++ R +FE +TE +++ W T+++GY+Q ++ +A+ FR+MQ +P++
Sbjct: 285 YSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC 344
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQ 131
+ + +SAC+ L + G+ IH+ L + +P N NALI MY+K G + A +
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSL----ALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + ++ +MIAG A HG+ E+L +F M ++ P ITFI++LSAC H G
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YFN+MK ++ IEP+ E Y CMIDLLGRAG L EAE L+ RMPF + W SLL
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G++EL A +++LEP N+ Y +LSN+YA GRW E +RK MRD GVKK
Sbjct: 521 GACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKK 580
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS+IEV KR+H FVA D+SHP +Y+ L +++G+MK A ++ +
Sbjct: 581 KPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y+K G+L +AR LF+ M E N +S ++IAGYAQ E++ LF+ M +
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIGK 128
P I ++ LSACA G VE G W NY E++ + + +ID+ ++GK+ +
Sbjct: 443 PTSITFISVLSACAHTGRVEEG-W--NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSE 499
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
A + M N I W +++ HG L +A + ++E + P
Sbjct: 500 AENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N ++A YAK A LF+ + E +++S+ TLI+ YA + A+ LF M+ +
Sbjct: 77 FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + A ++AC V L +H+ G ++ V +NNAL+ Y K+G + A +
Sbjct: 137 DMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKR 194
Query: 132 VFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M + ++W +MI H G +AL +F M R + + T ++L+A
Sbjct: 195 VFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA--FTC 252
Query: 191 LVEL-GRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAIWG 248
L +L G F+ + G +IDL + G + + K+ + E + +W
Sbjct: 253 LEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWN 311
Query: 249 SLLAA 253
++++
Sbjct: 312 TMVSG 316
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 223/348 (64%), Gaps = 11/348 (3%)
Query: 19 YAKVGD-LNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEI 76
Y+K G +++ R +FE +TE +++ W T+++GY+Q ++ +A+ FR+MQ +P++
Sbjct: 285 YSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC 344
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQ 131
+ + +SAC+ L + G+ IH+ L + +P N NALI MY+K G + A +
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSL----ALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + ++ +MIAG A HG+ E+L +F M ++ P ITFI++LSAC H G
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YFN+MK ++ IEP+ E Y CMIDLLGRAG L EAE L+ RMPF + W SLL
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G++EL A +++LEP N+ Y +LSN+YA GRW E +RK MRD GVKK
Sbjct: 521 GACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKK 580
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS+IEV KR+H FVA D+SHP +Y+ L +++G+MK A ++ +
Sbjct: 581 KPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y+K G+L +AR LF+ M E N +S ++IAGYAQ E++ LF+ M +
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIGK 128
P I ++ LSACA G VE G W NY E++ + + +ID+ ++GK+ +
Sbjct: 443 PTSITFISVLSACAHTGRVEEG-W--NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSE 499
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
A + M N I W +++ HG L +A + ++E + P
Sbjct: 500 AENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N ++A YAK A LF+ + E +++S+ TLI+ YA + A+ LF M+ +
Sbjct: 77 FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + A ++AC V L +H+ G ++ V +NNAL+ Y K+G + A +
Sbjct: 137 DMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKR 194
Query: 132 VFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M + ++W +MI H G +AL +F M R + + T ++L+A
Sbjct: 195 VFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA--FTC 252
Query: 191 LVEL-GRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAIWG 248
L +L G F+ + G +IDL + G + + K+ + E + +W
Sbjct: 253 LEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWN 311
Query: 249 SLLAA 253
++++
Sbjct: 312 TMVSG 316
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 227/343 (66%), Gaps = 3/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK--NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y G +A +F+ M + N++SW +++ +A +PNE +T+F M +
Sbjct: 843 NSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD 902
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD +++ L+ACA+ GA+ LG +H Y+E+ GL ++NALID+YAK G + A
Sbjct: 903 FAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDAR 962
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++FE M ++V++WT++I GLA +G G+EAL++FS MER ++ P EIT + +L AC H
Sbjct: 963 RIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHC 1022
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G RYF+ MK YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +
Sbjct: 1023 GLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRT 1082
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL + ++ +ELG+ A + L++L+P +SG+Y +LSN+YA +G W + +RK M V
Sbjct: 1083 LLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRV 1142
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K PG S +E+ V+EFV GD SHP+ +++Y++L +I +++
Sbjct: 1143 RKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLR 1185
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 51 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 110
A +P A+ L RR PD + ACA+L A+ GE +H + G T+V
Sbjct: 783 AGSPRPRVALELHRR---RLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLV 839
Query: 111 PLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRME 168
+ N+L+ +Y G A +VF+ M + +++++W +M+ A +G E L +F M
Sbjct: 840 FVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEML 899
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
P+ T +++L+AC G + LGRR ++ + G+ +IDL + G +
Sbjct: 900 GVDFAPDGFTIVSVLTACAEFGALALGRR-VHVYVEKVGLVENSHVSNALIDLYAKCGSV 958
Query: 229 QEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEP 275
+A ++ M W SL+ A+N +G L +L KL P
Sbjct: 959 NDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVP 1007
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 209/329 (63%), Gaps = 1/329 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+ +A + L +AR +F+ M ++V+SWTT+I+ YAQ ++ +EA+ F+ M E+
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE 546
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ + LS C LG+ +LG+ IH ++G+++ + + NAL+ MY K G + +
Sbjct: 547 KPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHK 605
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M+ + + TW T I G A HGLGREA+ M+ ME V PNE+TF+ +L+AC H GL
Sbjct: 606 VFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGL 665
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G ++F M YG+ P +E Y CM+DLLGR G +Q AEK + MP E + IW +LL
Sbjct: 666 VDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALL 725
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ + E+G A + L EP N+GNY +LSNIY+ LG W E ++RK+M+ GV K
Sbjct: 726 GACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSK 785
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
PGCS++++ +VH FV GD H + +
Sbjct: 786 EPGCSWMQIRNKVHSFVTGDKQHEKIEEI 814
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+MV GY + +A LF+ M ++N+++WT +I+GY +++Q + +FR M E
Sbjct: 160 WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGA 219
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK-IGKAL 130
PD+ + LSA L + + E + + + G + V + +++++Y + + A+
Sbjct: 220 SPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAI 279
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ F+ M ++ TW+TMIA L+ G A+ ++ R + + P++ + L+ C G
Sbjct: 280 KFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGLARC---G 335
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ R F + +P + + MI + G + EA++L RMPF N W +
Sbjct: 336 RITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-NTISWAGM 389
Query: 251 LAA 253
+A
Sbjct: 390 IAG 392
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 42/337 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY + G ++ A+ LF+ M +N ISW +IAGYAQ + EA+ L + + +
Sbjct: 355 WNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--------- 122
P ++ ++ AC+ +GA+E G +H+ + G + NALI MY K
Sbjct: 415 LPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQ 474
Query: 123 ----------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ + A +F+NM ++ V++WTT+I+ A G EA
Sbjct: 475 VFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEA 534
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
++ F M KPN +LS C +G +LG++ + + ++G++ ++ ++
Sbjct: 535 VEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQ-IHTVAIKHGMDSELIVANALMS 593
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP----H 276
+ + G ++ K+ M E + W + + +G LG A++ +E
Sbjct: 594 MYFKCG-CADSHKVFDSME-ERDIFTWNTFITGCAQHG---LGREAIKMYEHMESVGVLP 648
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVM-RDMGVKKM 312
N + L N + G +E + K M RD G+ +
Sbjct: 649 NEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPL 685
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 23/257 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++ Y G L +AR LF+ ++ NV + T L++GYA++ + +A +F M N
Sbjct: 67 WNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNT 126
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+A A +S Q G + + + + + + + N+++ Y S ++ A
Sbjct: 127 ----VAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSW----NSMVTGYCHSRQMVDAWN 178
Query: 132 VFENMKNKSVITWTTMIAG---LALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+F+ M ++++TWT MI+G + HG G D+F M P++ F ++LSA
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGKG---WDIFRMMHHEGASPDQSNFASVLSAV-- 233
Query: 189 VGLVELGRRYFNIMKS---RYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANA 244
GL +LG +++ + G E + ++++ R A L A K M E N
Sbjct: 234 TGLQDLG--VLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGM-VERNE 290
Query: 245 AIWGSLLAASNIYGDVE 261
W +++AA + G ++
Sbjct: 291 YTWSTMIAALSHGGRID 307
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A++G L AR +F+ M +++I+W ++I+ Y +A LF + NV+ I
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATI--- 100
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
LS A+LG V + + + + NT+ NA++ Y ++G I A ++F+ M ++
Sbjct: 101 -LLSGYARLGRVLDARRVFDGMPER--NTVAW--NAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V +W +M+ G +A ++F +M + N +T+ ++S + G F
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMP----QRNLVTWTVMISGYVRIEQHGKGWDIF 211
Query: 200 NIMKSRYGIEPKIEQYGCMIDL---LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
+M G P + ++ L G L+ L+ + FE++ I S+L N+
Sbjct: 212 RMMHHE-GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSIL---NV 267
Query: 257 Y 257
Y
Sbjct: 268 Y 268
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
++A I A+ G++ +A +VF+ M ++ +I W +MI+ G+ +A +F + V
Sbjct: 36 HSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNV 95
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+ I +LS +G V RR F+ M R + + M+ + G + A
Sbjct: 96 RTATI----LLSGYARLGRVLDARRVFDGMPERNTV-----AWNAMVSCYVQNGDITMAR 146
Query: 233 KLLRRMPFEANAAIWGSLLAA 253
+L MP + W S++
Sbjct: 147 RLFDAMP-SRDVTSWNSMVTG 166
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 220/341 (64%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ G + G++ A +LF MTE+N ISW +I+GYAQ QP EA+ LFR MQ+ +
Sbjct: 161 WNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQ 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ +++ LSAC+QLGA++ G W+H YI + + L+ ALIDMYAK G I A+Q
Sbjct: 221 EPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQ 280
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F + + V +T I+GLA++G EAL +F +M+ + P+ +++IA+L AC H G
Sbjct: 281 AFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGW 340
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M +GI P+++ Y CM+DLLGRAG L+EAEK + MP + + IWG+LL
Sbjct: 341 VEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALL 400
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +YG+ E+G+ L++ + ++ G Y +LSNIYA + ++ ++RK MR V +
Sbjct: 401 GACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDR 460
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PGCS IEV+ VHEF +GD SH + +Y + +I ++K
Sbjct: 461 VPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIK 501
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 35/208 (16%)
Query: 23 GDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNE---AITLFRRMQVENVKPDEIAM 78
GD++ A L T V + T I G+++ +P ++ LF RM V ++ P+
Sbjct: 36 GDIDYALLLLLRTSTPPTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTF 95
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
C+ A +LG H + + V + N++I Y+ G++ A VF+
Sbjct: 96 TFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSE 155
Query: 139 KSVITWTT-------------------------------MIAGLALHGLGREALDMFSRM 167
V++W + MI+G A +G +EAL +F M
Sbjct: 156 LDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREM 215
Query: 168 ERARVKPNEITFIAILSACCHVGLVELG 195
+ +PN +++LSAC +G ++ G
Sbjct: 216 QMLDQEPNSAILVSVLSACSQLGALDHG 243
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 235/359 (65%), Gaps = 2/359 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GYA++G ++ AR LF+ M EK+V+SWTT+I+G Q+ EA+ +F M + +
Sbjct: 171 WNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGM 230
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E + ++L+ACA L A++ G W+H YI++ + L LIDMYAK G++ A +
Sbjct: 231 SPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASK 290
Query: 132 VFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F + + V W MI G A+HG +EA+++F +M+ +V PN++TF+A+L+AC H
Sbjct: 291 LFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHG 350
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
VE GR YF M S Y ++P++E YGC++DLLGRAG L+EAE+++ M + AIWG+
Sbjct: 351 NRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGA 410
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A I+ D E+GE + + +L+P++ G + +L+NIY++ G WNE+ +R+ + + G
Sbjct: 411 LLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGK 470
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
KK PGCS IE++ H+F+ GD SHP +LY L ++ ++K A ++ +L+ D
Sbjct: 471 KKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDID 529
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYA-QMDQPNEAITLFRRM-QVENVKPDEIAMLAALSAC 85
A +F+ + ++ + T+I A ++ T FR + + E + P++ + A C
Sbjct: 53 AHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGC 112
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM-------------------------- 119
V GE + + + GL + + NALI M
Sbjct: 113 GSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWN 172
Query: 120 -----YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
YA+ GK+ +A Q+F+ M K V++WTTMI+G G EALD+F M + P
Sbjct: 173 IMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSP 232
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
NE T + L+AC ++ ++ G R+ ++ + I+ +ID+ + G L+ A KL
Sbjct: 233 NEYTLASSLAACANLVALDQG-RWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKL 291
Query: 235 LRRMP-FEANAAIWGSLLAASNIYG 258
P + W +++ ++G
Sbjct: 292 FNSNPRLKRKVWPWNAMIGGFAVHG 316
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 233/358 (65%), Gaps = 2/358 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ Y+ G L +AR +F+ M + +V++W+ +I GY + ++A+ LFR MQ
Sbjct: 171 NTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASG 230
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PDE+ ++ L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+
Sbjct: 231 VRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAV 290
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ M+ ++V++WT++I LA+ G G+EA+ +F M+ A V+P+++ FI +L+AC H G
Sbjct: 291 AVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAG 350
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ G YF+ MK YGI+PKIE YGCM+D+ GRAG ++ A + + MP + N IW +L
Sbjct: 351 MVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTL 410
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+AA +G +ELGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+K
Sbjct: 411 VAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIK 470
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PGCS +E+ VHEF+AGD SHP + +Y ++ ++ ++K H+ +L+ D
Sbjct: 471 KVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGHISATSEVLLDLD 528
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 217/351 (61%), Gaps = 6/351 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+MV GYA+ + AR +F M EKNV+SW LIAGY Q + EA+ LF ++ E++
Sbjct: 323 TSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIW 382
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVPLNNALIDMYAKSGKI 126
P L+ACA L ++LG H I ++G + + + N+LIDMY K G +
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMV 442
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
VFE M + V++W MI G A +G G AL++F +M + KP+ +T I +LSAC
Sbjct: 443 EDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSAC 502
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLVE GRRYF+ M++ G+ P + + CM+DLLGRAG L EA L++ MP + + +
Sbjct: 503 SHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVV 562
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WGSLLAA ++G++ELG+ + L++++P NSG Y +LSN+YA LGRW + ++RK MR
Sbjct: 563 WGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
GV K PGCS+IE+ RVH F+ D HP ++ +L + QMK+A ++
Sbjct: 623 RGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYV 673
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N +++ K G L+ A +F+ M E + SW +++G+AQ D+ EA+ F M E+
Sbjct: 88 YNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDF 147
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E + +ALSACA L + +G IH I + V + +AL+DMY+K G + A +
Sbjct: 148 VLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQR 207
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ M +++++W ++I +G +AL++F M V+P+EIT +++SAC
Sbjct: 208 AFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSA 267
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+ G + + R + ++D+ + + EA + RMP
Sbjct: 268 IREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 42/299 (14%)
Query: 1 MFTLSRLLYKFW--NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
+ + SR L + + +V Y+K G + A+ F+ M +N++SW +LI Y Q +
Sbjct: 176 LISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGK 235
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALI 117
A+ +F M V+PDEI + + +SACA A+ G IH +++ + L NAL+
Sbjct: 236 ALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALV 295
Query: 118 DMYAKSGKIGKALQVFE-------------------------------NMKNKSVITWTT 146
DMYAK ++ +A VF+ NM K+V++W
Sbjct: 296 DMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNA 355
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSR 205
+IAG +G EA+ +F ++R + P TF +L+AC ++ ++LGR+ + I+K
Sbjct: 356 LIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHG 415
Query: 206 Y----GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+ G E I +ID+ + G +++ + RM E + W +++ A N YG
Sbjct: 416 FWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM-VERDVVSWNAMIVGYAQNGYG 473
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKS-------------------------------GK 125
IH I + ++ + + N L+D Y K GK
Sbjct: 41 IHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGK 100
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ +A VF++M +W M++G A H EAL F M NE +F + LSA
Sbjct: 101 LDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSA 160
Query: 186 CCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C + + +G + + I KSRY ++ + ++D+ + G + A++ M N
Sbjct: 161 CAGLTDLNMGIQIHALISKSRYLLD--VYMGSALVDMYSKCGVVACAQRAFDGMAVR-NI 217
Query: 245 AIWGSLLAA 253
W SL+
Sbjct: 218 VSWNSLITC 226
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 214/346 (61%), Gaps = 12/346 (3%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
D N R LF + + N+ W T+I G D ++AI + M+ E P+ L
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 84 ACAQLGAVELG---------EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
ACA+L ++LG EWIH I + G+ V + +L+DMYAK G + KA VF+
Sbjct: 121 ACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 180
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR---VKPNEITFIAILSACCHVGL 191
M K +++W MI G AL+GL +EA+D+F +M+R +KP+ TFI +L C H GL
Sbjct: 181 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGL 240
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GRRYFN M + + P IE YGCM+DLLGRAG L EA +L+R MP EANA +WG+LL
Sbjct: 241 VDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 300
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ D +L E AL+ LI+LEP NSGNY +LSNIY+ +W+E+ K+R M + ++K
Sbjct: 301 GACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQK 360
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS+IEV VHEF+ GD HP +++Y L ++ +MK A ++
Sbjct: 361 PPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYV 406
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
++V YAK G++ AR++F+ M EK+++SW +I GYA P EAI LF +MQ EN
Sbjct: 160 TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKL 219
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGK 128
+KPD + L C G V+ G N + + + L + ++D+ ++G + +
Sbjct: 220 GIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDE 279
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALH 154
A Q+ NM + I W ++ +H
Sbjct: 280 AHQLIRNMPMEANAIVWGALLGACRIH 306
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 214/345 (62%), Gaps = 3/345 (0%)
Query: 3 TLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
R+L K W +M+ GY K +++A + F M K+ +SWT LI G+ Q QP +A
Sbjct: 176 VFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQA 235
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ LF +M +E +P+ I ++ LSACA +GA++LG IH Y + T + + NAL+DM
Sbjct: 236 LELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDM 295
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
YAKSG I A VFE ++ K TWTTMI+ + G GR+A+++F M R+ + PN +TF
Sbjct: 296 YAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTF 355
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+++LSAC H GL++ GR F+ M+ Y I+P++E YGCM+DLLGR G L+EAE L+ M
Sbjct: 356 VSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMD 415
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
E + IW SLL+A +G+ L E A + +IK EP + G Y +L N+YA+ RW E+
Sbjct: 416 VEPDIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALD 475
Query: 300 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+RK M + K PGCS+IEV VHEF+ D SH +Y L
Sbjct: 476 MRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKSHDARREIYVTL 520
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA+ G +A LF+ + ++IS+T+L++ + ++D +AI++F +PD A
Sbjct: 63 YAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAA 122
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------------- 125
+ ALSA LG +G +H I + GL++ + + NAL+DMY + GK
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 126 ------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+ AL F M KS ++WT +I G +AL++F +M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+PN IT + +LSAC +G ++LGR S+ I ++D+ ++G
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAIHG-YGSKSNATTNIIVTNALMDMYAKSGS 301
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ A + + + +A W +++++ + G+
Sbjct: 302 IASAFSVFEEVQMK-DAFTWTTMISSFTVQGN 332
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 211/341 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GY + L+ A +FE M KN +SW +++GY +A+ LF +M+ ENV
Sbjct: 367 WNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENV 426
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP + A++AC +LGA++ G+ +H +I Q G NALI MYA+ G + +A
Sbjct: 427 KPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHL 486
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M N ++W MI+ L HG GREAL++F RM + P+ I+F+ +L+AC H GL
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGL 546
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G RYF MK +GI P + Y +IDLLGRAG + EA L++ MPFE +IW ++L
Sbjct: 547 VDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ GD+ELG A L K+ P + G Y +LSN Y+ G W ++ ++RK+MRD GVKK
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKK 666
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE +VH F+ GDT HP+ +Y+ L + +M+
Sbjct: 667 EPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMR 707
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 158/345 (45%), Gaps = 51/345 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV GY + GD+ AR++FE + K + W +I+GY EA LFRRM +E V
Sbjct: 231 WTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERV 290
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIG 127
DE + LSACA +G G+ +H I + N + +P+NNAL+ Y+K G I
Sbjct: 291 PLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIA 350
Query: 128 KALQVFENMKNKSVITWTT-------------------------------MIAGLALHGL 156
A ++F+NM K V++W T M++G G
Sbjct: 351 VARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGF 410
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+AL +F++M VKP + T+ ++AC +G ++ G++ + + G E
Sbjct: 411 AEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHI-VQLGFEGSNSAGN 469
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
+I + R G ++EA + MP ++ W ++++A +G G AL+ ++
Sbjct: 470 ALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAMISALGQHGH---GREALELFDRMV-- 523
Query: 277 NSGNYAILSNIYAILGRWNESGKI-------RKVMRDMGVKKMPG 314
G Y + +L N SG + + RD G+ +PG
Sbjct: 524 AEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGI--IPG 566
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 145/347 (41%), Gaps = 49/347 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE- 69
++VA YA L A + F+ + ++ + +I+ YA+ A+ +FR +
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEW--IHNYIEQYGLNTIVPLNNALIDMYAKSGK-- 125
+++PD+ + A LSA L + + +H + + G + + NAL+ +Y K
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 126 -IGKALQVFENMKNKSVITWTT-------------------------------MIAGLAL 153
A +V + M NK +TWTT MI+G
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI---MKSRYGIEP 210
G+ EA ++F RM RV +E TF ++LSAC +VGL G+ ++ + E
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ ++ + G + A ++ M + + W ++L+ Y + + A++
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSG---YVESSCLDKAVEVF 387
Query: 271 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP---CDY 431
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 227/345 (65%), Gaps = 9/345 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+AGY + G+L+ AR +F M E+NV+SWTT+I+GYA+ + +A+ LF +M+ V
Sbjct: 201 WNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGV 260
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAKSGKIG 127
+ D++ +LAAL+ACA+LG +++G WIH+YI+ + + +V LNNALI MYA G I
Sbjct: 261 ELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMID 320
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER---ARVKPNEITFIAILS 184
+A +VF M +S ++WT++I A G + L++F M+R + +P+ ITFI +L
Sbjct: 321 EAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLC 380
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ GR+ F M R+GI+P+IE YGCM+DLL RAG+L EA++L+ MP + N
Sbjct: 381 ACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNN 440
Query: 245 AIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNY-AILSNIYAILGRWNESGKIRK 302
A+WG+LL Y + EL Q L+ + +P + Y ++L+ +YA +W + +R+
Sbjct: 441 AVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVATVRQ 500
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
M MGVKK G S++++++ H+ VAGD +H + +Y++L KI
Sbjct: 501 KMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYEMLGKI 545
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 41/269 (15%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L +A +F+ + + I W +I +A+ P ++I F +M + + +PD L+A
Sbjct: 76 LLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAA 135
Query: 85 CAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYA---------------------- 121
C ++ G+ +H+ + G ++ V L + L++ YA
Sbjct: 136 CTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSE 195
Query: 122 --------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+ G + A ++F M ++V++WTTMI+G A +G ++AL++F +M
Sbjct: 196 RNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQM 255
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY-GIEPK--IEQYGCMIDLLGR 224
+A V+ +++ +A L+AC +G +++G + ++ + G + + +I +
Sbjct: 256 RKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYAS 315
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + EA ++ R MP E +A W SL+ A
Sbjct: 316 CGMIDEAYEVFRWMP-ERSAVSWTSLITA 343
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
R+L N ++ YA G ++ A +F M E++ +SWT+LI +A+ + +FR
Sbjct: 300 RVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRS 359
Query: 66 MQ---VENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYA 121
MQ +PD I + L AC+ G V+ G + + I+++G+ + ++D+ +
Sbjct: 360 MQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLS 419
Query: 122 KSGKIGKALQVFENMKNK-SVITWTTMIAG 150
++G + +A ++ M K + W ++ G
Sbjct: 420 RAGFLDEAQELIATMPVKPNNAVWGALLGG 449
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 220/354 (62%), Gaps = 18/354 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+AGY + D + AR +F++M +NV+SWTT++AG A+ + +A+ LF M+ V
Sbjct: 110 WNSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACV 169
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-----NTIVPLNNALIDMYAKSGKI 126
+ D++A++AALSACA+LG ++LG WIH Y++Q + V LNNALI MYA G +
Sbjct: 170 ELDQVALVAALSACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGIL 229
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-----PNEITFIA 181
+A QVF M KS ++WT+MI A GLG+EALD+F M VK P+EITFI
Sbjct: 230 HEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIG 289
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+L AC H G V+ G + F MK +GI P IE YGCM+DLL RAG L EA L+ MP
Sbjct: 290 VLCACSHAGFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLN 349
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA-----ILSNIYAILGRWNE 296
N AIWG+LL I+ + EL A Q KL P +G+ A +LSNIYA RW +
Sbjct: 350 PNDAIWGALLGGCRIHRNSEL---ASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQD 406
Query: 297 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 350
+R+ M +MGVKK PG S+I+++ VH F+AGD +H +Y+ L + Q
Sbjct: 407 VITVRQKMIEMGVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQ 460
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
M W +I GYA+ P +A+ + M +PD + LSACA+ G V+ G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT--------- 145
E +H + G + V ++ +LI YA G + +A VF+ M +SV++W
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRC 120
Query: 146 ----------------------TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
TM+AG A +G R+AL +F M RA V+ +++ +A L
Sbjct: 121 ADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAAL 180
Query: 184 SACCHVGLVELGRRYFNIMKSRYGI----EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
SAC +G ++LGR ++ R+ +P + +I + G L EA ++ +MP
Sbjct: 181 SACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMP 240
Query: 240 FEANAAIWGSLLAA 253
++ + W S++ A
Sbjct: 241 RKSTVS-WTSMIMA 253
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 213/344 (61%), Gaps = 1/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + A +F + K+++SW T+I GY++ PNEA+ LF MQ E+ +
Sbjct: 794 NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-R 852
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I M L AC L A+E+G IH I + G ++ + + NALIDMY K G + A +
Sbjct: 853 PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +ITWT MI+G +HGLG EA+ F +M A +KP+EITF +IL AC H GL+
Sbjct: 913 FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G +FN M S +EPK+E Y CM+DLL R G L +A L+ MP + +A IWG+LL
Sbjct: 973 NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLC 1032
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DVEL E +H+ +LEP N+G Y +L+NIYA +W E K+R+ + G+KK
Sbjct: 1033 GCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKS 1092
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
PGCS+IEV + FV+ DT+HP ++ +L + +MK H
Sbjct: 1093 PGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGH 1136
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 3/248 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F NT++ Y+K G+LN+A FE M +K V+SWT+LIA Y + ++AI LF M+ +
Sbjct: 691 FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG 750
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PD +M + L ACA +++ G +HNYI + + +P++NAL+DMYAK G + +A
Sbjct: 751 VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 810
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K +++W TMI G + + L EAL +F+ M++ +P+ IT +L AC +
Sbjct: 811 LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLA 869
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E+GR + R G ++ +ID+ + G L A L +P E + W +
Sbjct: 870 ALEIGRGIHGCIL-RNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVM 927
Query: 251 LAASNIYG 258
++ ++G
Sbjct: 928 ISGCGMHG 935
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 133/241 (55%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++A Y K G++++A LF+ + +++V+SW ++I+G + A+ F +M + V
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D ++ +++ACA +G++ LG +H + + V NN L+DMY+K G + A+Q
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M K+V++WT++IA GL +A+ +F ME V P+ + ++L AC +
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR N ++ + + + ++D+ + G ++EA + ++P + + W +++
Sbjct: 772 DKGRDVHNYIR-KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIG 829
Query: 253 A 253
Sbjct: 830 G 830
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 5/241 (2%)
Query: 15 MVAGYAKVGDLNNARALFE-LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+V Y G L R +F+ ++++ V W +++ YA++ E+I LF++MQ +
Sbjct: 492 LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG 551
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L A LG V + IH + + G + + N+LI Y KSG++ A ++F
Sbjct: 552 NSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLF 611
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + ++ V++W +MI+G ++G AL+ F +M RV + T + ++AC +VG +
Sbjct: 612 DELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLS 671
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGR + +K+ + E ++D+ + G L +A + +M + W SL+A
Sbjct: 672 LGRALHGQGVKACFSREVMFNNT--LLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIA 728
Query: 253 A 253
A
Sbjct: 729 A 729
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
T I + ++ A+ L R Q + D A + L CA+ ++ G+ +H+ I
Sbjct: 423 TKICKFCEVGDLRNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCLQEGKMVHSVISSN 480
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFEN-MKNKSVITWTTMIAGLALHGLGREALDM 163
G+ L L+ MY G + + ++F++ + + V W M++ A G RE++ +
Sbjct: 481 GIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYL 540
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLV-ELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
F +M++ + N TF IL +G V E R + + K +G + +I
Sbjct: 541 FKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTV--VNSLIATY 598
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++G + A KL + + + W S+++ + G
Sbjct: 599 FKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVMNG 633
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 207/342 (60%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY + A +F+ + +N + WT++IAGYAQ D EAI LFR MQ+
Sbjct: 81 WNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGF 140
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + LSAC GA+ G WIH Y E+ + + NALI MY+K G I KAL+
Sbjct: 141 AADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALE 200
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
+F + + +W+ +I+GLA++G +AL +FS+ME + ++PNEITF+ +L AC H G
Sbjct: 201 IFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGG 260
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ G YFN M Y + P IE YGCM+DLLGRA L EAEK +R +P + + IW SL
Sbjct: 261 FVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSL 320
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +G++EL E A + + +LEP G +LSN+YA RW + ++RK M +K
Sbjct: 321 LFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIK 380
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PGCS++E+ VHE D SHP+ +Y+ + IN ++
Sbjct: 381 KQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQ 422
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 35/222 (15%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK---- 128
PD + L ACA+L + G IH+ + G++ V + NALI ++ G +
Sbjct: 8 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 129 -----------------------------ALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
AL+VF+ + +++ + WT+MIAG A L +E
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 127
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
A+++F M+ + T +LSAC H G + G R+ ++ R IE + +I
Sbjct: 128 AIELFREMQIGGFAADAATIACVLSACGHWGALAQG-RWIHLYCERNSIEMDLNARNALI 186
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G +Q+A ++ + + + W ++++ + G+ +
Sbjct: 187 GMYSKCGDIQKALEIFHGLT-QPDIFSWSAVISGLAMNGESD 227
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 216/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++ G+ K+GD+ A+ LF M EKNV+SWTT++ G++Q P +A+ F M E
Sbjct: 244 WNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGA 303
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ +++ALSACA++GA++ G IHNY+ G + + AL+DMYAK G I A +
Sbjct: 304 RPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEK 363
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF K K ++ W+ MI G A+HG R+AL F M+ KP+ + F+A+L+AC H G
Sbjct: 364 VFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQ 423
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G ++F+ M+ Y IEP ++ Y ++D+LGRAG L EA K +R MP + +WG+L
Sbjct: 424 VNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALF 483
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +VE+ E A + L++LEP + G+Y LSN YA +GRW+++ ++R MRD G K
Sbjct: 484 CACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHK 543
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV ++H FVAGD +H +Y L +I+ +
Sbjct: 544 DPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAR 584
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+F+ SR++ +F ++ + + ++ A ++F+ KN + LI G A+ + +I
Sbjct: 70 VFSSSRVVTQF----ISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSI 125
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+ F M + PD + L + A L +G +H I ++GL + +L+DMY
Sbjct: 126 SFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMY 185
Query: 121 AKSGKIGKALQVF----ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
K ++G AL+VF E++KN SV+ W +I G G +A ++F M +
Sbjct: 186 VKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPK 238
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 212/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV YA G + NA +F M KNV+SW ++I Q Q EA+ LF RM + V
Sbjct: 307 WTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGV 366
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ +++ LS C+ G + LG+ H YI + V L N+LIDMYAK G + A+
Sbjct: 367 MPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAID 426
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K+V++W +I LALHG G EA++MF M+ + + P+EITF +LSAC H GL
Sbjct: 427 IFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGL 486
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V++GR YF+IM S + I P +E Y CM+DLLGR G+L EA L+++MP + + +WG+LL
Sbjct: 487 VDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALL 546
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A IYG++E+ + ++ L++L NSG Y +LSN+Y+ RW++ KIRK+M D G+KK
Sbjct: 547 GACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKK 606
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
S+IE+ ++F+ D H +Y IL ++ +K
Sbjct: 607 CRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLK 647
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 158/327 (48%), Gaps = 43/327 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + +AR +F+ ++++ ++SW ++IAGY++M +EAI LF+ M V+
Sbjct: 176 NAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVE 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ LSA ++ ++LG ++H YI G+ + NALIDMYAK G + A V
Sbjct: 236 ADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHV 295
Query: 133 FENMKNKSVITWTTMIAGLALHGLGR-------------------------------EAL 161
F+ M +K V++WT+M+ A GL EA+
Sbjct: 296 FDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAV 355
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F RM + V P++ T ++ILS C + G + LG++ + I + +ID+
Sbjct: 356 ELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNI-ITVSVTLCNSLIDM 414
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 281
+ G LQ A + MP E N W ++ A ++G GE A++ ++ SG Y
Sbjct: 415 YAKCGALQTAIDIFFGMP-EKNVVSWNVIIGALALHG---FGEEAIEMFKSMQA--SGLY 468
Query: 282 AILSNIYAILGRWNESGKIRKVMRDMG 308
+L + SG + DMG
Sbjct: 469 PDEITFTGLLSACSHSGLV-----DMG 490
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL A LF+ + + N + LI GY+ + P +++ LFR+M P++ L
Sbjct: 85 GDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVL 144
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA +H + G+ + NA++ Y I A QVF+++ +++++
Sbjct: 145 KACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIV 204
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W +MIAG + G EA+ +F M + V+ + T +++LSA ++LG R+ ++
Sbjct: 205 SWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLG-RFVHLY 263
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
G+E +ID+ + G+LQ A+ + +M + + W S++ N Y + L
Sbjct: 264 IVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQM-LDKDVVSWTSMV---NAYANQGL 319
Query: 263 GECALQ 268
E A+Q
Sbjct: 320 VENAVQ 325
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 224/343 (65%), Gaps = 2/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
N +++ YA+ G +++A +LF M ++NVISWT +++GYAQ + EA+ F M + V
Sbjct: 155 NALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGV 214
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+ + + L ACA +GA+ LG + Y G+ T V + NAL++MYAK G I +A
Sbjct: 215 RPNEVTVSSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWM 274
Query: 132 VFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K + + +W +MI A+HGL RE L +F ++ KP+ ITF+ ++ AC H G
Sbjct: 275 VFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGG 334
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G+ FN M+ +G++P+IE YGCM+DLLGRAG L+EA+ L+ MP E +A IWG+L
Sbjct: 335 LVDEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGAL 394
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + +G++EL E A++ L++LEP N+ N ILSNIYA G+W+ ++ K++++ K
Sbjct: 395 LGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHK 454
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K G S+IE+ R+H+F+ D SHP ++ +Y L I MK
Sbjct: 455 KSAGYSFIELDGRMHKFLVEDKSHPIYEMVYDTLDSITLIMKL 497
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 233/359 (64%), Gaps = 7/359 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ G+LN AR LF+ ++++S+ T+I GYA+++QP A+ LF MQ
Sbjct: 74 NALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ----N 129
Query: 73 PDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+ ++A LSACA+LGA +LG+ + H YIE N L A++DMYAK G I AL+
Sbjct: 130 SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALE 189
Query: 132 VFENM-KN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F + KN K+ + +MIAGLA HGLG A+ +F + +KP+E+TF+ +L AC H
Sbjct: 190 IFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHS 249
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL+E G++ F M + YGI+P++E YGCM+DLLGR G L+EA L+++MPFEAN+ IW +
Sbjct: 250 GLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRA 309
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A +G+V++GE A Q L+++E + Y +LSNI A +W E+ ++RKVM D G+
Sbjct: 310 LLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGI 369
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+K PG SYIE+ +H FVA D SHP + +L + ++K A ++ N + + D
Sbjct: 370 RKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDID 428
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 118/227 (51%), Gaps = 9/227 (3%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYI 101
W T+I GY++ D P EAI L+ M + + P+ L++CA+L ++E G +H++I
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
++G + + + NALI +Y+ G + A +F+ + ++++ TMI G A AL
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M+ + +E+T +A+LSAC +G +LG+R ++ ++D+
Sbjct: 122 CLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 222 LGRAGYLQEAEKLLRRMPFEANAA-IWGSLLAASNIYGDVELGECAL 267
+ G + A ++ RR+ ++ S++A +G LGE A+
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHG---LGETAI 221
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 213/339 (62%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+V YAK GD+ AR +F+ M ++++SWT++I+GYA +E + F M+ V P
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++L+ L AC LGA+ GEW H+Y+ Q G + + A++DMY+K G + A +F
Sbjct: 918 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ K ++ W+ MIA +HG GR+A+D+F +M +A V+P+ +TF +LSAC H GL+E
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G+ YF +M + I K+ Y CM+DLLGRAG L EA L+ MP E +A+IWGSLL A
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
I+ +++L E HL L+P ++G + +LSNIYA RWNE K+RK+M G K+
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S +E +VH+F GD SHP +++LY L ++ MK
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMK 1196
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 221/346 (63%), Gaps = 1/346 (0%)
Query: 7 LLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 66
L + ++ Y K + A LF+ + +K+V+SW L++GYAQ +++ +FR M
Sbjct: 340 LDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM 399
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ ++PD +A++ L+A ++LG + +H Y+ + G N+ V + +LI++Y+K G +
Sbjct: 400 LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSL 459
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSA 185
G A+++F+ M + V+ W++MIA +HG G EAL++F +M + + V+PN +TF++ILSA
Sbjct: 460 GDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H GLVE G + F+ M Y + P E +G M+DLLGR G L +A ++ RMP A
Sbjct: 520 CSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPH 579
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+WG+LL A I+ ++E+GE A ++L L+P ++G Y +LSNIYA+ G+W+ ++R ++
Sbjct: 580 VWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIK 639
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
+ G+KKM G S +EV VH F+A D HPD ++Y++L K+ QM
Sbjct: 640 ERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQM 685
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 3/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
+ +V Y+K G + A +FE + + WT+++ GY Q + P EA+ LF +M ++ V
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + +++ +SACAQL V+ G +H + + + +PL N+L+++YAK+G A
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M K VI+W+TMIA A + EAL++F M R +PN +T ++ L AC
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G++ I + G E +ID+ + EA L +R+P + + W +LL
Sbjct: 323 LEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALL 380
Query: 252 AA 253
+
Sbjct: 381 SG 382
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 131/246 (53%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YAK G A LF M EK+VISW+T+IA YA + NEA+ LF M + +
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE 304
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +++AL ACA +E G+ IH G ++ ALIDMY K +A+ +
Sbjct: 305 PNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDL 364
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K V++W +++G A +G+ +++ +F M ++P+ + + IL+A +G+
Sbjct: 365 FQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIF 424
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + R G + +I+L + G L +A KL + M + IW S++A
Sbjct: 425 QQALCLHGYV-VRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIA 482
Query: 253 ASNIYG 258
A I+G
Sbjct: 483 AYGIHG 488
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 6/254 (2%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
SR+L KF Y ++ A +FE + W +I G+A + ++ L+
Sbjct: 752 SRILTKF----AIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYS 807
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+M + +KPD+ A AL +CA L ++ G+ IH ++ G + + ++ AL+DMYAK G
Sbjct: 808 KMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCG 867
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
I A VF+ M + +++WT+MI+G A +G E L F M + V PN ++ +++L
Sbjct: 868 DIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLL 927
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++G + G +F+ + G E I ++D+ + G L A L + +
Sbjct: 928 ACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DL 985
Query: 245 AIWGSLLAASNIYG 258
W +++A+ I+G
Sbjct: 986 VCWSAMIASYGIHG 999
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 5/238 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIA 77
YAK L AR +F+ NV W + + Y + Q E + LF M PD
Sbjct: 46 YAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFT 105
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+ AL ACA L +ELG+ IH + ++ + + + + +AL+++Y+K G++G+AL+VFE
Sbjct: 106 IPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF 165
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELG 195
+ + WT+M+ G + EAL +FS+M V + +T ++++SAC + V+ G
Sbjct: 166 QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAG 225
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ R + + +++L + G + A L +MP E + W +++A
Sbjct: 226 SCVHGLVIRRE-FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMIAC 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H I YGL + MY +I A VFE++ N W MI G A G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYG 216
+L+++S+M +KP++ F L +C GL +L R + + G +
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELG 263
++D+ + G ++ A + +M + W S+++ A N Y LG
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISGYAHNGYNSETLG 905
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 2/166 (1%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+ + + G+ L +YAK + A +VF+ + +V W + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 157 GREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
E L +F M A P+ T L AC + ++ELG+ K I +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+++L + G + EA K+ + +W S++ D E
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPE 187
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 222/348 (63%), Gaps = 4/348 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W MV+ YAK+GDL+ A+ LF+ M KN++SW +I GY + EA+ F+ M +E
Sbjct: 271 WTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGR 330
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDE +++ +SACAQLG+VE WI ++I + ++ + L NALIDM+AK G +G+A
Sbjct: 331 FRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQ 390
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F MK + +ITWTTMI+G A +GL REAL +++ M R V+ +++ FIA L+AC H G
Sbjct: 391 SIFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDDMVFIAALAACVHGG 450
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G FN M +Y I+P++E YGC++DLLGRAG LQEA + MP E + IW +L
Sbjct: 451 LLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWATL 510
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ +G+ E + + + +LEP NS ++SN A+ GRW+ R +MR+ G++
Sbjct: 511 LSSCVAHGNAEFIDYVSKKITELEPFNSSYQVLVSNSSALEGRWDGVIGARTIMRNWGIE 570
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
K+PG S I+V VHEF+A DT H +R +I ++G M H +
Sbjct: 571 KVPGSSSIQVGSEVHEFLAKDTMH---ERRKEIYETVDGLMALMRHTE 615
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++ Y GD A LFE M E+NV+SW TL+AG+A++ A T+F RM N
Sbjct: 177 WNSIIGVYMSSGDYTGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNA 236
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
I+ +S A G VE + + ++Q V A++ YAK G + A +
Sbjct: 237 ----ISWNLMISGYASSGDVEAARSMFDRMDQ---KKDVVSWTAMVSAYAKIGDLDTAKE 289
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
+F++M K++++W MI G + EAL F M R +P+E T ++++SAC +G
Sbjct: 290 LFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLG 349
Query: 191 LVELGRRYFNIMKS---RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
VE Y N + S + + I +ID+ + G + A+ + M
Sbjct: 350 SVE----YCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEM 396
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 56 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 115
P +A+ + M V P+ L ACA LG +H I ++G + V + N
Sbjct: 86 PADALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRCVHGQIVRWGFGSEVFVQNT 145
Query: 116 LIDMYAK---SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
L+D+Y + G++ A QVF+ M ++ V++W ++I G A+++F M
Sbjct: 146 LLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMP---- 201
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+ N +++ +++ VG + + F+ M SR I + MI +G ++ A
Sbjct: 202 ERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNAI-----SWNLMISGYASSGDVEAAR 256
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ RM + + W ++++A GD++ + H+
Sbjct: 257 SMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHM 294
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 225/344 (65%), Gaps = 2/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
+N +++ YAK G +++A LFE M ++NV+SWT +++GYAQ + EA+ F M +
Sbjct: 156 YNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAG 215
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+P+E+ + + L ACA +GA+ELG + Y GL V + NAL++MY+K G I +A
Sbjct: 216 VQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAW 275
Query: 131 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF+ + + + + +W +MI A+HGL REAL +F ++ A VKP+ ITF+ ++ AC H
Sbjct: 276 QVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHG 335
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV G+ +F+ M++ + ++P+IE YGCM+DLLGRAG L E+ L+ MP E +A IWG+
Sbjct: 336 GLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGA 395
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VEL E A+ LI LEP N+ N ILSNIYA G+W+ ++ K++++
Sbjct: 396 LLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDH 455
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
KK G S+IE+ +H+F+ D SHP F+ +Y L + MK
Sbjct: 456 KKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKL 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 33/179 (18%)
Query: 112 LNNALIDMYAKS-------------------------------GKIGKALQVFENMKNKS 140
L++AL+ YAKS G + A ++FE M +++
Sbjct: 124 LSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMPDRN 183
Query: 141 VITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V++WT M++G A +G EA++ F M ERA V+PNE+T ++L AC VG +ELGR+
Sbjct: 184 VVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVE 243
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G+ + ++++ + G +++A ++ + + + + W S++ A ++G
Sbjct: 244 EYARGK-GLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHG 301
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 227/343 (66%), Gaps = 3/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V Y G +A +F+ M +N++SW +++ +A +PNE +T+F M +
Sbjct: 155 NSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD 214
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD +++ L+ACA+ GA+ LG +H Y+E+ GL ++NALID+YAK G + A
Sbjct: 215 FAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDAR 274
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++FE M ++V++WT++I GLA +G G+EAL++FS MER ++ P EIT + +L AC H
Sbjct: 275 RIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHC 334
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ G RYF+ MK YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +
Sbjct: 335 GLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRT 394
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL + ++ +ELG+ A + L++L+P +SG+Y +LSN+YA +G W + +RK M V
Sbjct: 395 LLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRV 454
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K PG S +E+ V+EFV GD SHP+ +++Y++L +I +++
Sbjct: 455 RKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLR 497
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 8/235 (3%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 104
T++ A +P A+ L RR PD + ACA+L A+ GE +H +
Sbjct: 89 TVLRIAAGSPRPRVALELHRRRLA---LPDTHTYPPLIQACARLLALREGECLHAEAAKN 145
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALD 162
G T+V + N+L+ +Y G A +VF+ M + +++++W +M+ A +G E L
Sbjct: 146 GFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLT 205
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+F M P+ T +++L+AC G + LGRR ++ + G+ +IDL
Sbjct: 206 VFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRR-VHVYVEKVGLVENSHVSNALIDLY 264
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEP 275
+ G + +A ++ M W SL+ A+N +G L +L KL P
Sbjct: 265 AKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVP 319
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 225/344 (65%), Gaps = 2/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
+N +++ YAK G +++A LFE M ++NV+SWT +++GYAQ + EA+ F M +
Sbjct: 156 YNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAG 215
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+P+E+ + + L ACA +GA+ELG + Y GL V + NAL++MY+K G I +A
Sbjct: 216 VQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAW 275
Query: 131 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF+ + + + + +W +MI A+HGL REAL +F ++ A VKP+ ITF+ ++ AC H
Sbjct: 276 QVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHG 335
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV G+ +F+ M++ + ++P+IE YGCM+DLLGRAG L E+ L+ MP E +A IWG+
Sbjct: 336 GLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGA 395
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VEL E A+ LI LEP N+ N ILSNIYA G+W+ ++ K++++
Sbjct: 396 LLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDH 455
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
KK G S+IE+ +H+F+ D SHP F+ +Y L + MK
Sbjct: 456 KKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKL 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 33/179 (18%)
Query: 112 LNNALIDMYAKS-------------------------------GKIGKALQVFENMKNKS 140
L++AL+ YAKS G + A ++FE M +++
Sbjct: 124 LSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMPDRN 183
Query: 141 VITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYF 199
V++WT M++G A +G EA++ F M ERA V+PNE+T ++L AC VG +ELGR+
Sbjct: 184 VVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVE 243
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G+ + ++++ + G +++A ++ + + + + W S++ A ++G
Sbjct: 244 EYARGK-GLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHG 301
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 215/340 (63%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + YAK G + +A +F M +K+VISW T+I GY + PNEA+TLF MQ E+ K
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-K 551
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L ACA L A++ G IH Y + G + + NA++DMY K G + A +
Sbjct: 552 PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSL 611
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + NK +++WT MIAG +HG G EA++ F++M ++P+E++FI+IL AC H GL+
Sbjct: 612 FDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLL 671
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + FNIMK IEP +E Y CM+DLL R G L +A K ++ MP + +A IWG+LL
Sbjct: 672 DEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLC 731
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DV+L E + + +LEP N+G Y +L+NIYA +W E K+RK + G+KK
Sbjct: 732 GCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKN 791
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE+ +++ FVAGD S P ++ +L ++ +MK
Sbjct: 792 PGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 6/257 (2%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
TL R + +F NT++ Y+K GDLN+A +FE M EK V+SWT++I GY + + AI L
Sbjct: 383 TLDREV-RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKL 441
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
F M+ V PD A+ + L+ACA G ++ G+ +H+YI + L T ++NAL DMYAK
Sbjct: 442 FDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAK 501
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + A VF +MK K VI+W TMI G + L EAL +F+ M+R KP+ T I
Sbjct: 502 CGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACI 560
Query: 183 LSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
L AC + ++ GR +++ Y + + ++D+ + G L A L +P
Sbjct: 561 LPACASLAALDKGREIHGYALRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-N 617
Query: 242 ANAAIWGSLLAASNIYG 258
+ W ++A ++G
Sbjct: 618 KDLVSWTVMIAGYGMHG 634
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 130/242 (53%), Gaps = 3/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y + A+ LF+ +T+++VISW ++I+GY + + I +F +M V V
Sbjct: 290 NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVD 349
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D M+ ACA +G + LG+ +H+Y I+ L+ V NN L+DMY+K G + A++
Sbjct: 350 IDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIR 409
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M K+V++WT+MI G GL A+ +F M+ V P+ +IL+AC G
Sbjct: 410 VFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGN 469
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G+ + ++ +E + D+ + G +++A + M + + W +++
Sbjct: 470 LKSGKIVHDYIREN-NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMI 527
Query: 252 AA 253
Sbjct: 528 GG 529
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K GDL R +F+ ++E + W +I+ Y+ E+I LF++M +KP+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L A + VE G +H I + G N+ + N+LI Y K+ A ++F+
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ ++ VI+W +MI+G +GL +++F +M V + T + + AC ++G + L
Sbjct: 311 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G+ + ++ ++ ++D+ + G L A ++ RM E W S++
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITG 428
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+N D A + L CA+ ++ G + + IE G+ L L+ MY K G + +
Sbjct: 144 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKE 203
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
VF+ + + W MI+ + G E++++F +M +KPN TF +IL
Sbjct: 204 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 263
Query: 189 VGLVELGRR 197
V VE GR+
Sbjct: 264 VARVEEGRQ 272
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 230/362 (63%), Gaps = 5/362 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L A+ +F M ++ +SW+T+I G++ NE+ + FR + +
Sbjct: 373 WNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEM 432
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E+++ LSAC+Q GA E G+ +H ++E+ G + IV +NNALIDMY++ G + A
Sbjct: 433 RPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARL 492
Query: 132 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ K S+++WT+MIAGLA+HG G EA+ +F+ M + V P+EI+FI++L AC H G
Sbjct: 493 VFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAG 552
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G YF+ MK Y IEP +E YGCM+DL GR+G LQ+A + +MP A +W +L
Sbjct: 553 LIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTL 612
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + +G++EL E Q L +L+P+NSG+ +LSN+YA G+W + IRK M +K
Sbjct: 613 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIK 672
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSH----PDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 366
K+ S +EV K +++F A + ++L +I+ ++ + +A + + V E
Sbjct: 673 KITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEE 732
Query: 367 SD 368
+
Sbjct: 733 EE 734
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 13/244 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALS 83
L AR L E + + TL+ GY++ D+P+ ++ +F M + + PD + +
Sbjct: 222 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVK 281
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A A ++ G +H ++GL++ + + LI MY + G +G A +VF+ M +++
Sbjct: 282 AAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVA 341
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++ A ++F +M + N ++ +L+ G +E +R F+ M
Sbjct: 342 WNAVVTACFRGNDVSGAREIFDKM----LVRNHTSWNVMLAGYIKAGELECAKRIFSEMP 397
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR---RMPFEANAAIWGSLLAASNIYGDV 260
R + + MI G E+ R R N +L+A + G
Sbjct: 398 HRDDV-----SWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAF 452
Query: 261 ELGE 264
E G+
Sbjct: 453 EFGK 456
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 219/378 (57%), Gaps = 38/378 (10%)
Query: 12 WNTMVAGYAKVGDLNNA-------------------------------------RALFEL 34
WN+MVAGYA+ G N+A + +F
Sbjct: 206 WNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVK 265
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
+ EK++ISW +IA Y PNEA+ L+ +MQV V+PD +++ + L AC L A LG
Sbjct: 266 LKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLG 325
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH Y+E+ L + L NALIDMYAK G + +A VF+ M + V++WT+MI+ +
Sbjct: 326 RRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMS 385
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
G G++A+ +F +M + P+ I F+++L+AC H GLV+ GR FN+M + YGI P IE
Sbjct: 386 GQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AEYGITPGIEH 444
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
Y CM+DLLGRAG + EA L R+MP E N +WGSLL+A +Y + + A HL +L
Sbjct: 445 YNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLA 504
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 334
P SG Y +LSNIYA GRW + +R +M G+KK+PG S +E++ V+ F+AGD SH
Sbjct: 505 PEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSH 564
Query: 335 PDFDRLYQILCKINGQMK 352
+Y+ L + G+MK
Sbjct: 565 TQSKEIYKALGVLVGRMK 582
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ Y K L+ AR + + M ++++SW +++AGYAQ + N+A+ L R M+ +K
Sbjct: 176 NGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLK 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M + L A T +N L Y K +
Sbjct: 236 PDAGTMGSLLPAV----------------------TNTSCDNVL---YVK--------DM 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +K KS+I+W MIA + + EA+D++ +M+ V+P+ ++ ++L AC +
Sbjct: 263 FVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAA 322
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGRR ++ R + P + +ID+ + G L+EA + +M F + W S+++
Sbjct: 323 VLGRRIHEYVE-RKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFR-DVVSWTSMIS 380
Query: 253 ASNIYG 258
A + G
Sbjct: 381 AYGMSG 386
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 89/171 (52%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA G+ R +F+ +T+KNV+ + +I Y +A+ +F+ M + PD
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ G + +G IH + + GL+ + + N L+ MY K + A +V +
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M + +++W +M+AG A +G +AL + ME ++KP+ T ++L A
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA 247
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ YA G+ +F+ + +K+V+ + MI +GL ++AL +F M P+
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
T+ +L AC G + +G + + + G++ + ++ + G+ +L A ++L
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAV-VKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195
Query: 236 RRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEP 275
MP + W S++A A N + L C +KL+P
Sbjct: 196 DEMPGR-DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKP 236
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 213/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ Y+K GD+ +AR LF+ M K +SWT +IAGYA+ +EA+TLF M+ K
Sbjct: 297 NTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEK 356
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +++ +S C Q GA+ELG+WI Y GL + + NALID+YAK G + A ++
Sbjct: 357 PDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNAREL 416
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M KS+++WTT+IAG AL+G +EAL +F +M +KPN ITF+A+L AC H G +
Sbjct: 417 FYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFL 476
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G FN+M Y I P ++ Y CM DLLGR G L+EA + ++ MPF+ + IW LL+
Sbjct: 477 EKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLS 536
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +V +GEC HL +LEP + Y ++NIYA G+W+ IR +M+ K
Sbjct: 537 ACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKS 596
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S ++V+ + HEF D HP+ +Y+ L + QMK
Sbjct: 597 PGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQMK 636
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 141/251 (56%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT +A YAK G+ A +F+ + + K +SW ++IAGYA +Q ++A+ F++M
Sbjct: 194 NTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGG 253
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ D +L+ LS+C Q + G+ IH + Q G ++ + + N LI MY+K G IG A
Sbjct: 254 FRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSAR 313
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+NM K+ ++WT MIAG A G EA+ +FS ME KP+ +T I+++S C G
Sbjct: 314 YLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTG 373
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ELG ++ + + G++ + +ID+ + G + A +L MP E + W +L
Sbjct: 374 ALELG-KWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-EKSLVSWTTL 431
Query: 251 LAASNIYGDVE 261
+A + G+ +
Sbjct: 432 IAGCALNGEFK 442
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 126/251 (50%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V Y K L A LF M +++V SW ++I G+AQ+ + ++LF M +E ++
Sbjct: 93 TSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIR 152
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + ++ + L +++ E IH++ + G++T V ++N I YAK G+ G A V
Sbjct: 153 ADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETV 212
Query: 133 FENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F+ + K+ ++W +MIAG A +A+ F +M + + T +++LS+C
Sbjct: 213 FDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPE 272
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ G + + + G + I+ +I + + G + A L M + + W ++
Sbjct: 273 VLFHG-KLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVS-WTAM 330
Query: 251 LAASNIYGDVE 261
+A GD++
Sbjct: 331 IAGYAEKGDLD 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 70/144 (48%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
V W + I ++A+ LFR+M+ ++P+ + + AC++L ++ + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
++ + + + +++DMY K ++G A +F M + V +W +MI G A G
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 159 EALDMFSRMERARVKPNEITFIAI 182
+ +F M ++ + +T I +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGL 161
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 129 ALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A Q F N +V W + I G +AL +F +M++ ++PN +TF ++ AC
Sbjct: 6 ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65
Query: 188 HVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ ++ + + +++KSR+ + ++ ++D+ + L A L RMP + + A
Sbjct: 66 KLLNLKYSQIVHTHVVKSRFQADLFVQT--SVVDMYVKCSQLGFAYNLFSRMP-KRDVAS 122
Query: 247 WGSLL 251
W S++
Sbjct: 123 WNSMI 127
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 210/329 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + YAK G L + R +F M ++++ISWT+L+ Y+Q + ++AI +F M+ E +
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + L +CA L +E G+ +H I + GL+ + +AL+DMYAK G +G A +V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N ++WT +IAG A HG+ +AL +F RM + V+PN +TF+ +L AC H GLV
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +YF +MK YG+ P++E Y C++DLL R G+L +A + + RMP E N +W +LL
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+VELGE A Q ++ + NS Y +LSN Y G + + +R +M++ GVKK
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKE 714
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS+I V+ +H+F AGD HP+ D++Y
Sbjct: 715 PGCSWISVNGTLHKFYAGDQQHPEKDKIY 743
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 19/255 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y+K D++ A LF+ M+++N SWT LIAG A+ + F MQ + +
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ A L C L ++ELG +H I G + ++ AL++MYAK +I + +V
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKV 228
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +V++W MI G + L +A D+F RM V P+ TFI + A +G++
Sbjct: 229 FNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA---IGML 285
Query: 193 ELGRRYFNIMK--SRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLR------RMPF 240
R N K S Y +E ++ +ID+ + G LQEA + R
Sbjct: 286 ----RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 241 EANAAIWGSLLAASN 255
NA I G L + N
Sbjct: 342 PWNAMISGYLRSGFN 356
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 20 AKVGDLNNARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
+K G L AR++F +T + W +I+GY + +A+ LF +M ++ D
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENM 136
+ +A A L + LG+ +H + GL V ++NA+ + YAK G + +VF M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+++ +I+WT+++ + +A+++FS M + PN+ TF ++L +C ++ L+E G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
+ I+ + G++ ++D+ + G L +A+K+ R+ A+ W +++A
Sbjct: 498 QVHGII-CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQ 555
Query: 257 YGDVELGECALQHLIKL--EPH 276
+G V+ + +++L EP+
Sbjct: 556 HGIVDDALQLFRRMVQLGVEPN 577
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 82 LSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L C ++ + +H ++ ++ + + L N + Y+K I A ++F+ M +
Sbjct: 75 LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQR 134
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+ +WT +IAGLA +GL + + F M+ + P++ + IL C + +ELG
Sbjct: 135 NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG---- 190
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE---KLLRRMPFEANAAIWGSLL---AA 253
N++ ++ I LL LQE E K+ M E N W +++ +
Sbjct: 191 NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNAMITGFTS 249
Query: 254 SNIYGD 259
+++Y D
Sbjct: 250 NDLYLD 255
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 218/348 (62%), Gaps = 4/348 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W MV+ YAK+GDL+ LF+ M KN++SW +I GY + +EA+ F+ M +E
Sbjct: 278 WTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGR 337
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDE +++ +SACAQLG+VE WI ++I + ++ V L NALIDM+AK G +G+A
Sbjct: 338 FRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAE 397
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F M+ + +ITWTTMI+G A +GL R+AL +++ M R V+ ++ FIA L+AC H G
Sbjct: 398 SIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGG 457
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G FN M RY I+P++E YGCM+DLLGRAG LQEA + MP E + IW +L
Sbjct: 458 LLQEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTL 517
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L + +G+ EL E + + +LEP NS ++SN A+ GRW+ R MR+ G++
Sbjct: 518 LCSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIE 577
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
K+PG S I+V VHEF+A DT H +Y+ ++G M H +
Sbjct: 578 KVPGSSSIQVGSEVHEFLAKDTRHKRRKEIYE---TVDGLMALMRHTE 622
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++V Y GD A FE M E+NV+SW T++AG+A+M A +F RM N
Sbjct: 185 WNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGDMVTARAVFDRMPSRNA 244
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ +S A G VE + + ++Q + + A++ YAK G + +
Sbjct: 245 ----VSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSW----TAMVSAYAKIGDLDTVNE 296
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
+F++M K++++W MI G + EAL F M R +P+E T ++++SAC +G
Sbjct: 297 LFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLG 356
Query: 191 LVELGRRYFNIMKSRYG---IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
VE Y N + S G I + +ID+ + G + AE + +M
Sbjct: 357 SVE----YCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKM 403
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS----- 123
+ V P+ L ACA LG +H I + G + V + NAL+D+Y +
Sbjct: 105 QGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGG 164
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G +G A QVF+ M ++ V++W +++ G A+ F M + N +++ ++
Sbjct: 165 GGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMP----ERNVVSWNTVV 220
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+ +G + R F+ M SR + + MI +G ++ A + RM + +
Sbjct: 221 AGFARMGDMVTARAVFDRMPSRNAV-----SWNLMISGYAMSGDVEAARSVFDRMD-QKD 274
Query: 244 AAIWGSLLAASNIYGDVE 261
W ++++A GD++
Sbjct: 275 VVSWTAMVSAYAKIGDLD 292
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 223/332 (67%), Gaps = 2/332 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y+K ++ AR +F+ +TE+N++ W+ +++GYA++ NEA+ +FR MQV ++
Sbjct: 131 SSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIE 190
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE++++ LSACA +GA+++G+W+H YI++ ++ + LN ALI+MYAK G I KA ++
Sbjct: 191 PDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREI 250
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ K W++MI GLA+HGL +AL++FSRME A+ KPN +TFI ILSAC H GLV
Sbjct: 251 FDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLV 310
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+RY++ M GIEP +E YGCM+DLL R G + EA +P + IW +LL
Sbjct: 311 SDGKRYWSSM-LELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLV 368
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ E L++LEP + NY IL+N+YA + + + +RK+M++ G+K +
Sbjct: 369 AYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKAL 428
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGC+ IEV VH FV GD SHP+ + + + L
Sbjct: 429 PGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTL 460
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 139/260 (53%), Gaps = 7/260 (2%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVK-PD 74
A + G+ + AR +F + + ++ ++I G P+ E I LF+ M + P+
Sbjct: 32 AALSPFGNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPN 91
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
M L AC+ + A+E G+ IH I + G ++ + ++L++ Y+K +I A +VF+
Sbjct: 92 TFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFD 151
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ ++++ W+ M++G A G+ EAL MF M+ ++P+E++ + +LSAC VG +++
Sbjct: 152 EITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDI 211
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ +K R I +E +I++ + G +++A ++ M + + A W S++
Sbjct: 212 GKWVHAYIKKRM-IHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKA-WSSMIVGL 269
Query: 255 NIYGDVELGECALQHLIKLE 274
I+G L E AL ++E
Sbjct: 270 AIHG---LAEDALNVFSRME 286
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 222/356 (62%), Gaps = 8/356 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALF--------ELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
WN +++ YA +G + A A+F M NV+SW+ +I G+A Q EA+ LF
Sbjct: 340 WNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELF 399
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
RRMQ+ VK + + + + LS CA+L A+ LG IH ++ + ++ + + N LI+MY KS
Sbjct: 400 RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKS 459
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + VFE ++NK +I+W TM+AG +HGLG A+ F +M + +P+ +TF+A+L
Sbjct: 460 GSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVL 519
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC H GLV GR F+ M + +EP++E Y CM+DLLGRAG LQEA K+++ MP E N
Sbjct: 520 SACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPN 579
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
A +WG+LL + ++ + E+ E + L +G+Y +LSNIYA GRW +S K+R
Sbjct: 580 ACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRIS 639
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+ G+KK PG S+I+V K+V+ F AG+T H + + +Y+IL + QM+ ++ +
Sbjct: 640 AKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 695
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 55/323 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WNTMV+GYA D + A +F +M E N+++WT+L++ +A+ Q E + LF RM+
Sbjct: 204 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ + A+ LS L A + G+ IH Y+ + G + + N+LI +Y K G +
Sbjct: 264 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 323
Query: 128 KALQVFENMKNK---------------------------------------SVITWTTMI 148
A +F +K K +V++W+ +I
Sbjct: 324 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 383
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 207
G A G G EAL++F RM+ A+VK N +T ++LS C + + LGR + ++++S
Sbjct: 384 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL-- 441
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
++ I +I++ ++G +E + ++ + W +++A I+G LGE A+
Sbjct: 442 MDGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHG---LGENAI 497
Query: 268 Q---HLIK--LEPHNSGNYAILS 285
+ +IK EP A+LS
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLS 520
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+V+ YA G +++A+ +FE+ + N++ W +++ EA+ ++ RM+ V
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + ACA +G+ +L +H ++ + G + + N L+ MY K G++ A +
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M +S ++W TM++G AL+ A +MF M A ++PN +T+ ++LS+ G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 143
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 43 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 102
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 161
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVSG 210
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 208/321 (64%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M++GYA G + AR +F+ M K+V+SW ++ YA + NE + +F M ++
Sbjct: 210 WNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSA 269
Query: 72 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD ++ LSACA LG++ GEW+H YI+++G+ + AL+DMY+K GKI KAL
Sbjct: 270 ERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKAL 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF + + V TW ++I GL++HGLG++AL++FS M KPN ITFI +LSAC HVG
Sbjct: 330 EVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 389
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ R+ F +M S YGIEP IE YGCM+DLLGR G +EAE+L+ +P + + + SL
Sbjct: 390 LLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESL 449
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +G +E E L++ P S Y +SN+YA GRW+E+ ++R MR VK
Sbjct: 450 LGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVK 509
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS IEV VHEF+AG+
Sbjct: 510 KNPGCSMIEVDGVVHEFLAGE 530
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++ + N + ++I YA P A+T+FR M + V PD+ + L ACA
Sbjct: 63 AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAA 122
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---------------------- 125
E G IH + L T V + N LI++Y +SG
Sbjct: 123 FCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSL 182
Query: 126 ---------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV---- 172
+ +A +F+ M+ ++V +W MI+G A GL +EA ++F M V
Sbjct: 183 LSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWN 242
Query: 173 ----------------------------KPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
+P+ T + +LSAC +G + G + ++
Sbjct: 243 AMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQG-EWVHVYID 301
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
++GIE + ++D+ + G + +A ++ R + + + W S++ +++G LG+
Sbjct: 302 KHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTS-KRDVSTWNSIITGLSVHG---LGK 357
Query: 265 CALQ 268
AL+
Sbjct: 358 DALE 361
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A + +++ + T ++I A AL +F M V P++ +F +L A
Sbjct: 60 VSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 186 CCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C E GR+ + MKS + +E +I++ GR+GY + A K+L RMP +A
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVEN--TLINVYGRSGYFEIARKVLDRMPVR-DA 176
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
W SLL+A Y D L E A ++E N ++ + + YA G E+ R+V
Sbjct: 177 VSWNSLLSA---YLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEA---REVF 230
Query: 305 RDMGVKKM 312
M VK +
Sbjct: 231 DSMPVKDV 238
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 226/344 (65%), Gaps = 1/344 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G +N A +FE +++++++SW ++I AQ D P+ AI +FR+M V + D +++
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AALSACA L + G+ IH ++ ++ L + V + LIDMYAK G + A+ VF+ MK
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
K++++W ++IA HG +++L +F M E++ ++P++ITF+ I+S+CCHVG V+ G R
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+F M YGI+P+ E Y C++DL GRAG L EA + ++ MPF +A +WG+LL A ++
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+VEL E A L+ L+P NSG Y ++SN +A W K+R +M++ V+K+PG S+
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
IE++KR H FV+GD +HP+ +Y +L + G+++ ++ +
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K G ++A LF +M+ + ++W +I+GY Q E++T F M V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + L + ++ +E + IH YI ++ ++ + L +ALID Y K + A +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + V+ +T MI+G +GL ++L+MF + + ++ PNEIT ++IL + +
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR + + G + + +ID+ + G + A ++ R+ + + W S++
Sbjct: 458 KLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMIT 515
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 131/260 (50%), Gaps = 2/260 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K ++ A+ +F +V+ +T +I+GY +++ +FR + +
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI +++ L L A++LG +H +I + G + + A+IDMYAK G++ A ++
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + + +++W +MI A A+D+F +M + + + ++ A LSAC ++
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ M ++ + + +ID+ + G L+ A + + M E N W S++A
Sbjct: 559 SFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIA 616
Query: 253 ASNIYGDVELGECALQHLIK 272
A +G ++ C +++
Sbjct: 617 ACGNHGKLKDSLCLFHEMVE 636
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 90/173 (52%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y + G ++ LF+ + +K+ + W ++ GYA+ + I F M+++ +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + LS CA ++LG +H + G++ + N+L+ MY+K G+ A ++
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F M +TW MI+G GL E+L F M + V P+ ITF ++L +
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 107/236 (45%), Gaps = 4/236 (1%)
Query: 19 YAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
YA G ++ +F + ++ W ++I+ + + N+A+ + +M V PD
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+ AC L + +++ + + G++ + ++LI Y + GKI ++F+ +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K + W M+ G A G + FS M ++ PN +TF +LS C L++LG
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++ G++ + ++ + + G +A KL R M A+ W +++
Sbjct: 260 QLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+E P +++L L AC+ + G+ +H ++ ++ + ++ MYA G
Sbjct: 30 LEETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 128 KALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
++F +++ S+ W ++I+ +GL +AL + +M V P+ TF ++ A
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147
Query: 186 CCHVGLVEL-GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C V L G + + S G++ +I G + KL R+ + +
Sbjct: 148 C--VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDC 204
Query: 245 AIWGSLL 251
IW +L
Sbjct: 205 VIWNVML 211
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 219/349 (62%), Gaps = 8/349 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALF--------ELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
WN +++ YA +G + A A+F M NV+SW+ +I G+A Q EA+ LF
Sbjct: 340 WNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELF 399
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
RRMQ+ VK + + + + LS CA+L A+ LG IH ++ + ++ + + N LI+MY KS
Sbjct: 400 RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKS 459
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + VFE ++NK +I+W TM+AG +HGLG A+ F +M + +P+ +TF+A+L
Sbjct: 460 GSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVL 519
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC H GLV GR F+ M + +EP++E Y CM+DLLGRAG LQEA K+++ MP E N
Sbjct: 520 SACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPN 579
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
A +WG+LL + ++ + E+ E + L +G+Y +LSNIYA GRW +S K+R
Sbjct: 580 ACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRIS 639
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ G+KK PG S+I+V K+V+ F AG+T H + + +Y+IL + QM+
Sbjct: 640 AKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQME 688
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 55/323 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WNTMV+GYA D + A +F +M E N+++WT+L++ +A+ Q E + LF RM+
Sbjct: 204 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ + A+ LS L A + G+ IH Y+ + G + + N+LI +Y K G +
Sbjct: 264 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 323
Query: 128 KALQVFENMKNK---------------------------------------SVITWTTMI 148
A +F +K K +V++W+ +I
Sbjct: 324 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 383
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 207
G A G G EAL++F RM+ A+VK N +T ++LS C + + LGR + ++++S
Sbjct: 384 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL-- 441
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
++ I +I++ ++G +E + ++ + W +++A I+G LGE A+
Sbjct: 442 MDGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHG---LGENAI 497
Query: 268 Q---HLIK--LEPHNSGNYAILS 285
+ +IK EP A+LS
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLS 520
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+V+ YA G +++A+ +FE+ + N++ W +++ EA+ ++ RM+ V
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + ACA +G+ +L +H ++ + G + + N L+ MY K G++ A +
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M +S ++W TM++G AL+ A +MF M A ++PN +T+ ++LS+ G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 143
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 43 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 102
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 161
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVSG 210
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 224/344 (65%), Gaps = 3/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
NT++ YAK G+L +R +F+ M E++VISW ++IA YAQ E++ +F RM + +
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + A L ACA G+ LG+ IH+ + + GL + V + ++IDMY K GK+ A +
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 419
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F+ M+ K+V +W+ M+AG +HG +EAL++F M A VKPN ITF+++L+AC H GL
Sbjct: 420 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G +F M + +EP +E YGCM+DLLGRAGYL+EA L++ M + +WG+LL
Sbjct: 480 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ +V+LGE + + L +L+P N G Y +LSNIYA GRW + ++R +M++ G+ K
Sbjct: 540 GACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVK 599
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S +++ RVH F+ GD HP +++Y+ L K++ MK E
Sbjct: 600 PPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS--MKLQE 641
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 145/255 (56%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
+ +V Y+K G+L +AR LF+ ++ +N++SWT++I GY Q D + A+ LF+ VE
Sbjct: 191 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESG 250
Query: 71 ------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
V D IAM++ LSAC+++ + E +H ++ + G + + N L+D YAK G
Sbjct: 251 SEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCG 310
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 183
++G + +VF+ M + VI+W ++IA A +G+ E++++F RM + + N +T A+L
Sbjct: 311 ELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 370
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC H G LG+ + + + G+E + +ID+ + G ++ A K RM E N
Sbjct: 371 LACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKN 428
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 429 VKSWSAMVAGYGMHG 443
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 27 NARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N LF +K NV SW ++IA A+ EA+ F M+ ++KP+ A+ +C
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+ L + G H +G + +++AL+DMY+K G++ A +F+ + ++++++WT
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222
Query: 146 TMIAGLALHGLGREALDMFSRM--------ERARVKPNEITFIAILSACCHVGLVELGRR 197
+MI G + AL +F V + I +++LSAC V +
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ R G E + ++D + G L + ++ M E + W S++A
Sbjct: 283 VHGFLIKR-GFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIA 335
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 210/332 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L+ AR +F+++ ++++SWT +I+G Q +P+EA+ +F MQ+ VK
Sbjct: 255 NALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVK 314
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + LSACA LGA+E G W+H YIE+ G+ V + +++DMY K G + A+ +
Sbjct: 315 PDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSI 374
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+V +W +I G ALHG GREALD F RM + + PNE+TFI +L ACCH GLV
Sbjct: 375 FQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLV 434
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR+ F +M Y + P + YGCM+DLLGRAG +QEA +++ MP W +LL+
Sbjct: 435 QEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLS 494
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +G ++ + L H+ +LE +G Y +LSN+YA+ RW + GK R M + G++K
Sbjct: 495 ACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKE 554
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IEV+ + EF+ G +H D + +L
Sbjct: 555 PGSSVIEVNGKTCEFLVGQQNHLYMDDVRAML 586
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 136/248 (54%), Gaps = 9/248 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y G +AR +F+ M E++V+SWT L++ + + EA+ + M +V
Sbjct: 157 NALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVT 213
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+E+ + + L AC LG G+ +H + + LN IV NAL+DMY K K+ A
Sbjct: 214 PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIV--GNALLDMYVKCEKLDLAR 271
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + + +++WT MI+GL EAL++F+ M+ + VKP+++ +LSAC +G
Sbjct: 272 RVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLG 331
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E GR ++ R GIE + ++D+ + G L A + + MP + N + W +L
Sbjct: 332 ALESGRWVHEYIE-RKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLK-NVSSWNAL 389
Query: 251 LAASNIYG 258
+ ++G
Sbjct: 390 INGFALHG 397
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVEN-----VKPDEIAMLAALSACAQLGA-VELGEW 96
+ LI+ P+ A F + V + +PD + AAL ACA+LG + G
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
H E+ G VP+ NAL+ Y G+ G A +VF+ M + V++WT +++ G+
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
EAL + + M+ V PNE+T ++L AC ++G G+
Sbjct: 200 FMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGK 236
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M++GY G ++ ARA+F+ M K+V SW+ +I G + EA+ LF M V +
Sbjct: 157 NSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTL 216
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A+++ LSACA LGA+ G WIH YI++ G + + L+ ALIDMYAK G I +
Sbjct: 217 PNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKF 276
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + ++TW +I+G A++G ++ ++F M + PN + F+AILSAC H G V
Sbjct: 277 FRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYV 336
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ YFN M GI P IE YGCM+DLLGRAG L+EAE+ + MP + N+ IWGS+L+
Sbjct: 337 EEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLS 396
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + D+ G A +HLI+LEP + Y + ++ G E+ KIRK++ D G++
Sbjct: 397 ACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETT 456
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
G S+IEV +HEF+ GDT H + +Y++ +NG ++ A
Sbjct: 457 SGSSFIEVDGTIHEFLVGDTIHNEAAEIYKVWKGLNGLLEAA 498
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y + +++ AR++FE + +V + T+I G +P +++ LF + + +KPD
Sbjct: 27 LLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGCLKPD 86
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-------- 126
L AC+ A+ G+ +H I + G++ ++++LI MY SG I
Sbjct: 87 NYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLR 146
Query: 127 -----------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
KA +F+ MK K V +W+ +I G +G+ EAL +
Sbjct: 147 EFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALAL 206
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M + PNE +++LSAC H+G + G R+ + R G + I +ID+
Sbjct: 207 FEDMMVSHTLPNESALVSLLSACAHLGALHQG-RWIHAYIDRIGADMSIRLSTALIDMYA 265
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G +Q K R+MP + WG++++ IYG +
Sbjct: 266 KCGDIQSGYKFFRKMP-RRDIVTWGAIISGFAIYGQAK 302
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 218/356 (61%), Gaps = 7/356 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G+++ R LF+ M K +I+W +I GYAQ N + L++ M+ +
Sbjct: 152 NCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFC 211
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++ LS+CA LGA+ +G+ + +E +G ++ LNNAL++MYA+ G + KA +
Sbjct: 212 PDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDI 271
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M KSV++WT +I G +HG G A+ +F M R +KP+ F+++LSAC H GL
Sbjct: 272 FDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLT 331
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G YF +M+ +YG+ P E Y CM+DLLGRAG L EA +L+ M A+ A+WG+LL
Sbjct: 332 NKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLG 391
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VEL E A + +I+LEP N+G Y +LSN+Y G ++R +MR +KK
Sbjct: 392 ACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKD 451
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PGCSY+E RVH F AGD +HP + +Y+ L ++ E+L + G ++D
Sbjct: 452 PGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNEL-------ENLVKDLDGCKKND 500
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 151/299 (50%), Gaps = 25/299 (8%)
Query: 1 MFTLSRLLYKFWNT-MVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPN 57
+F LL F T +++ Y K ++NAR LF+ + K + + +L++GYA +
Sbjct: 36 VFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVK 95
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
+ + LF M+ V+ + + ML + C G + LG +H + ++GL+ + N L+
Sbjct: 96 DVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLL 155
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
MY KSG+I ++F+ M K +ITW MI G A +GL L+++ ME P+ +
Sbjct: 156 TMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPL 215
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG---------CMIDLLGRAGYL 228
T + +LS+C H+G + +G+ +E K+E +G ++++ R G L
Sbjct: 216 TLVGVLSSCAHLGALSVGKE----------VERKMEGFGFSSNPFLNNALVNMYARCGNL 265
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
++A + MP ++ + W +++ ++G E+ +I+ ++P + ++LS
Sbjct: 266 KKARDIFDGMPVKSVVS-WTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLS 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ A+ +CA L G+ +H ++ + G + +LI MY K I A ++
Sbjct: 8 PNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKL 67
Query: 133 FEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F+ K + + ++++G AL+ ++ + +F M V+ N +T + ++ C G
Sbjct: 68 FDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPG 127
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ LG ++G++ C++ + ++G + KL MP
Sbjct: 128 NLGLGMCVHGFC-VKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP 175
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/343 (40%), Positives = 218/343 (63%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ V
Sbjct: 134 WNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGV 193
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A++AAL+AC LGA+ G W+H Y+ V ++N+LID+Y + G + A +
Sbjct: 194 RPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFARE 253
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ KP+ +TF L+AC HVGL
Sbjct: 254 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 313
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYF MK YGI P+IE YGC++DL RAG L++A K++ MP + N + GSLL
Sbjct: 314 VEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLL 373
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G + L E ++HL L + NY ILSN+YA G+W + ++R+ M+ +G+K
Sbjct: 374 AACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLK 433
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PG S IE+ H F+AGD++H + + ++L ++ ++
Sbjct: 434 KQPGFSSIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDLRL 476
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 49/273 (17%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
G K+ LN + T + +SWT+ I + + EA F M++ V+P+ I
Sbjct: 12 GXPKIQRLNQS-------TSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHIT 64
Query: 78 MLAALSACAQL--GAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFE 134
+A LS C G+ L +H Y + GL+ T V + A+I MY+K G + KA VF+
Sbjct: 65 FIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFD 124
Query: 135 NMKNKSVITWTTMIA-------------------------------GLALHGLGREALDM 163
M++ + +TW TMI G G EAL
Sbjct: 125 YMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVW 184
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMID 220
F M+ + V+P+ + IA L+AC ++G + G RY +M + ++ +ID
Sbjct: 185 FREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRY--VMNQDFKNNVRVSN--SLID 240
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
L R G ++ A ++ +M + W S++
Sbjct: 241 LYCRCGCVEFAREVFDKME-KRTVVSWNSVIVG 272
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 215/342 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE T +++S+T++I YAQ Q EA+ LF MQ +K
Sbjct: 499 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 558
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA L A E G+ +H +I +YG + N+L++MYAK G I A +
Sbjct: 559 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 618
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W+ MI GLA HG GR+AL +F++M + V PN IT +++L AC H GLV
Sbjct: 619 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 678
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ YF M+ +G +P E Y CMIDLLGRAG + EA +L+ +MPFEANA++WG+LL
Sbjct: 679 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 738
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A+ I+ DVELG A + L LEP SG + +L+NIYA G+W ++R++MRD VKK
Sbjct: 739 AARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKE 798
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S+IEV +V+ F+ GD SH +Y L +++ M A
Sbjct: 799 PGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 840
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 163/327 (49%), Gaps = 31/327 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK + +++ LF+ + E+NV+SW L + Y Q+D EA+ LF M + +K
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ + ++AC L G+ IH Y+ + G + NAL+DMYAK G + A+ V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE +K +++W +IAG LH +AL++ +M+R+ + PN T + L AC +GL
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELGR+ + ++MK +E + ++D+ + L++A +P E + W +++
Sbjct: 376 ELGRQLHSSLMK--MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAII 432
Query: 252 AA-SNIYGDVELGECALQHLIKLEPHNSG-NYAILSNIYAILGRWNESGKIRKVMRDMGV 309
+ S + D+E AL +++ G N LS I +
Sbjct: 433 SGYSQYWEDME----ALSLFVEMHKEGIGFNQTTLSTI---------------------L 467
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPD 336
K G + V ++VH H D
Sbjct: 468 KSTAGLQVVHVCRQVHGLSVKSGFHSD 494
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 135/262 (51%), Gaps = 5/262 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAKVGDL +A ++FE + + +++SW +IAG + +A+ L +M+ +
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGIC 356
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +AL ACA +G ELG +H+ + + + + + ++ L+DMY+K + A
Sbjct: 357 PNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 416
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K +I W +I+G + + EAL +F M + + N+ T IL + + +V
Sbjct: 417 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 476
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ R+ + + G I +ID G+ ++++AE++ + + S++
Sbjct: 477 HVCRQVHG-LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMIT 534
Query: 253 ASNIYGDVELGECALQHLIKLE 274
A YG GE AL+ ++++
Sbjct: 535 AYAQYGQ---GEEALKLFLEMQ 553
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 146/288 (50%), Gaps = 11/288 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K L +AR F L+ EK++I+W +I+GY+Q + EA++LF M E + +
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 459
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + L + A L V + +H + G ++ + + N+LID Y K + A ++FE
Sbjct: 460 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 519
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++++T+MI A +G G EAL +F M+ +KP+ ++L+AC ++ E
Sbjct: 520 ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQ 579
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G++ + +I+K YG I ++++ + G + +A + + E W +++
Sbjct: 580 GKQLHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGG 636
Query: 254 SNIYGDVELGECALQHLIK-LEPHNSGNYAILSNIYAILGRWNESGKI 300
+G G ALQ + L+ S N+ L ++LG N +G +
Sbjct: 637 LAQHGH---GRQALQLFNQMLKEGVSPNHITL---VSVLGACNHAGLV 678
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 124/248 (50%), Gaps = 8/248 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K + AR L + +E +++SW+ LI+GYAQ A+ F M + VK
Sbjct: 95 NHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+E + L AC+ + + +G+ +H + G V + N L+ MYAK + + ++
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++V++W + + EA+ +F M + +KPNE + ++++AC GL
Sbjct: 215 FDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLR 272
Query: 193 ELGRR---YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+ R + ++K Y +P ++D+ + G L +A + ++ + + W +
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNA 329
Query: 250 LLAASNIY 257
++A ++
Sbjct: 330 VIAGCVLH 337
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
LI Q Q + + + N P ++ LS C ++ G IH +I + G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L+ + N LI++Y+K G A ++ + +++W+ +I+G A +GLG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
M VK NE TF ++L AC V + +G++ ++ G E + ++ + +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVMYAKC 205
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++++L +P E N W +L +
Sbjct: 206 DEFLDSKRLFDEIP-ERNVVSWNALFSC 232
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 219/352 (62%), Gaps = 9/352 (2%)
Query: 2 FTLSRLLYKF--------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F +RL++ + WNTM+ GY + G +++A LF+ M E+++ISWT +I G+ +
Sbjct: 68 FRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKK 127
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
EA+ FR MQ+ VKPD +A++AAL+AC LGA+ G WIH Y+ V ++
Sbjct: 128 GFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVS 187
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N+LID+Y + G + A QVF+ M+ ++V++W ++I G A +G E+L F +M+ K
Sbjct: 188 NSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFK 247
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
PN +TF L+AC HVGLVE G RYF MK Y I P+IE YGC++DL RAG L++A K
Sbjct: 248 PNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALK 307
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
+++ MP + N + GSLLAA G + L E ++HL L + NY ILSN+YA G
Sbjct: 308 VVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAADG 367
Query: 293 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+W + K+R+ M+ +G+KK PG S IE+ H F+AGD +H + + ++L
Sbjct: 368 KWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVL 419
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 127/317 (40%), Gaps = 81/317 (25%)
Query: 63 FRRMQVENVKPDEIAMLAALSACAQL--GAVELGEWIHNYIEQYGLNTI-VPLNNALIDM 119
F M++ V+P+ I +A LS L G+ LG+ +H Y + GL+ V + A++ M
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIA------------------------------ 149
Y+K G+ KA VF+ M+ K+ +TW TMI
Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121
Query: 150 -GLALHGLGREALDMFSRMERARVKPNEITFIAILSAC---------------------- 186
G G EAL F M+ + VKP+ + IA L+AC
Sbjct: 122 NGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFK 181
Query: 187 -------------CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
C G VE R+ F+ M+ R + + +I G+ E+
Sbjct: 182 NNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR-----TVVSWNSVIVGFAANGHAHESLV 236
Query: 234 LLRRMP---FEANAAIWGSLLAASNIYGDVELGECALQHL---IKLEPHNSGNYAILSNI 287
R+M F+ NA + LAA N G VE G Q + ++ P +Y L ++
Sbjct: 237 YFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIE-HYGCLVDL 295
Query: 288 YAILGRWNESGKIRKVM 304
Y+ GR ++ K+ + M
Sbjct: 296 YSRAGRLEDALKVVQSM 312
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 215/342 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE T +++S+T++I YAQ Q EA+ LF MQ +K
Sbjct: 472 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA L A E G+ +H +I +YG + N+L++MYAK G I A +
Sbjct: 532 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 591
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W+ MI GLA HG GR+AL +F++M + V PN IT +++L AC H GLV
Sbjct: 592 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 651
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ YF M+ +G +P E Y CMIDLLGRAG + EA +L+ +MPFEANA++WG+LL
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A+ I+ DVELG A + L LEP SG + +L+NIYA G+W ++R++MRD VKK
Sbjct: 712 AARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKE 771
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S+IEV +V+ F+ GD SH +Y L +++ M A
Sbjct: 772 PGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 813
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 8/201 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK + +++ LF+ + E+NV+SW L + Y Q D EA+ LF M + +K
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ + ++AC L G+ IH Y+ + G + NAL+DMYAK G + A+ V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA--------RVKPNEITFIAILS 184
FE +K +++W +IAG LH +AL++ +M+R ++ + + ++
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVD 375
Query: 185 ACCHVGLVELGRRYFNIMKSR 205
L+E R FN++ +
Sbjct: 376 MYSKCDLLEDARMAFNLLPEK 396
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 146/288 (50%), Gaps = 11/288 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K L +AR F L+ EK++I+W +I+GY+Q + EA++LF M E + +
Sbjct: 373 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 432
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + L + A L V + +H + G ++ + + N+LID Y K + A ++FE
Sbjct: 433 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 492
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++++T+MI A +G G EAL +F M+ +KP+ ++L+AC ++ E
Sbjct: 493 ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQ 552
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G++ + +I+K YG I ++++ + G + +A + + E W +++
Sbjct: 553 GKQLHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGG 609
Query: 254 SNIYGDVELGECALQHLIK-LEPHNSGNYAILSNIYAILGRWNESGKI 300
+G G ALQ + L+ S N+ L ++LG N +G +
Sbjct: 610 LAQHGH---GRQALQLFNQMLKEGVSPNHITL---VSVLGACNHAGLV 651
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K AR L + +E +++SW+ LI+GYAQ A+ F M + VK
Sbjct: 95 NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+E + L AC+ + + +G+ +H + G V + N L+ MYAK + + ++
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++V++W + + EA+ +F M + +KPNE + ++++AC GL
Sbjct: 215 FDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLR 272
Query: 193 ELGRR---YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+ R + ++K Y +P ++D+ + G L +A + ++ + + W +
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNA 329
Query: 250 LLAASNIYGDVELGECALQHL--IKLEPHNS 278
++A ++ E E AL+ L +K + H+S
Sbjct: 330 VIAGCVLH---EHHEQALELLGQMKRQLHSS 357
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
LI Q + + + + N P ++ LS C ++ G IH +I + G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L+ + N LI++Y+K G A ++ + +++W+ +I+G A +GLG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
M VK NE TF ++L AC V + +G++ ++ G E + ++ + +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVMYAKC 205
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++++L +P E N W +L +
Sbjct: 206 DEFLDSKRLFDEIP-ERNVVSWNALFSC 232
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAKVGDL +A ++FE + + +++SW +IAG + +A+ L +M+ +
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ--- 353
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+H+ + + + + + ++ L+DMY+K + A
Sbjct: 354 ------------------------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 389
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K +I W +I+G + + EAL +F M + + N+ T IL + + +V
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 449
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ R+ + + G I +ID G+ ++++AE++ + + S++
Sbjct: 450 HVCRQVHG-LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMIT 507
Query: 253 ASNIYGDVELGECALQHLIKLE 274
A YG GE AL+ ++++
Sbjct: 508 AYAQYGQ---GEEALKLFLEMQ 526
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 216/346 (62%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD AR +F V+S+ +IA + +P EA+ LFR MQ + +KP
Sbjct: 173 TLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKP 232
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA+ELG W+H+Y+ + GL ++V ++ ALIDMYAK G + A+ VF
Sbjct: 233 TSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVF 292
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M++K W+ MI A HG GREA+ +F M++ +KP++ITF+ +L AC H GLV
Sbjct: 293 QGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVS 352
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YF+ MK +GI P I+ YGC+ DLL R+G L+ A K + +P +W +LL+A
Sbjct: 353 EGLQYFDDMKD-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSA 411
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+GD ELG+ + ++KL+ + G+Y I SN+ A G W E +RK+M + GV K+P
Sbjct: 412 CGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVP 471
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IE+ VHEF AGD HP +++ ++ Q+K ++ N
Sbjct: 472 GCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPN 517
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 8/240 (3%)
Query: 25 LNNARALFELMTEKNVISW-TTLIAGYAQMDQPNE-----AITLFRRMQVENVKPDEIAM 78
L AR +F+ + W TL+ GYA+ P+ A+ +F RM E V PD
Sbjct: 77 LAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTF 136
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L ACA A E G H + G + LI+MYA+ G A +F
Sbjct: 137 VSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDG 196
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V+++ MIA EAL +F M+ +KP +T I++LSAC +G +ELGR
Sbjct: 197 GCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWV 256
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ ++ + G+ ++ +ID+ + G L++A + + M + A W ++ A +G
Sbjct: 257 HDYVR-KIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQA-WSVMIVAYANHG 314
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ YAK G L +A +F+ M K+ +W+ +I YA EAI+LF M+
Sbjct: 268 LVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMK 327
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
E +KPD+I L L AC+ G V G + ++ +G+ + + D+ A+SG++
Sbjct: 328 KEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGCVTDLLARSGQLE 387
Query: 128 KALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
+A + + + N + I W T+++ HG LG+ + +++
Sbjct: 388 RAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLD 432
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/309 (47%), Positives = 203/309 (65%), Gaps = 1/309 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK G++ AR LF+ + +K+V++W +IAGY EA+ +F M+
Sbjct: 213 WNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQ 272
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKAL 130
+PD++ ML+ LSA A LG +E+G+ IH I + V L+NALIDMYAK G IG AL
Sbjct: 273 RPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNAL 332
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M+ K +W ++I GLALHG E++++F M R ++KPNEITF+A+L AC H G
Sbjct: 333 EVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAG 392
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V GR YFN+MK+ + IEP I+ YGCM+D+LGRAG L EA + M E NA IW +L
Sbjct: 393 KVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTL 452
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++GDVELG A + L+K+ SG+Y +LSNIYA G W+ K+RK+M D GVK
Sbjct: 453 LGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVK 512
Query: 311 KMPGCSYIE 319
K G S I+
Sbjct: 513 KKVGHSLID 521
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 40/262 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ +A GDL ARALF+ ++ V+ W+ L AGYA+ + + A LF
Sbjct: 152 NTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLF--------- 202
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
DE+ M +L W N +I YAK G++ KA ++
Sbjct: 203 -DEMPM------------KDLVSW-----------------NVMITAYAKHGEMEKARKL 232
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K V+TW MIAG L L +EAL+MF M +P+++T ++ILSA +G +
Sbjct: 233 FDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDL 292
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E+G++ + + + +ID+ + G + A ++ + M + + + W S++
Sbjct: 293 EIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMR-KKDTSSWNSIIG 351
Query: 253 ASNIYGDVELGECALQHLIKLE 274
++G E Q +++L+
Sbjct: 352 GLALHGHAEESINLFQEMLRLK 373
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYA--KSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+H ++ GLN+ + LI + A SG + A Q+F + + W TMI G A
Sbjct: 32 LHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQT 91
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
A+ ++++ME V+P++ TF +L AC + V+LG +GI K+ +
Sbjct: 92 LKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLG----------FGIHGKVLK 141
Query: 215 YG 216
G
Sbjct: 142 SG 143
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 140/298 (46%), Positives = 194/298 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+A K+GD A LF M E+NV SWT++I GYAQ + EAI LF M+ +
Sbjct: 182 WNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGL 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ ++A L ACA +G + LG IH++ + G + + N LIDMY K G + A +
Sbjct: 242 LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACR 301
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+NM+ ++V++W+ MIAGLA HG +AL +F++M VKPN +TFI IL AC H+G+
Sbjct: 302 IFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGM 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+YF M YGI P+IE YGCM+DL RAG LQEA + + MP N +WG+LL
Sbjct: 362 VEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALL 421
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
++ +V+L E A +HL KL+P N G Y +LSNIYA GRW + ++RK+MRD G
Sbjct: 422 GGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGT 479
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 174/385 (45%), Gaps = 59/385 (15%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A+ +F+L+ V W T + +A+ D P +AI+LF R++ ++ PD L AC++
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW--- 144
L V G+ +H Y+E+ GL + + L N ++ +YA G+IG A +VF+ M + VITW
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 145 ----------------------------TTMIAGLALHGLGREALDMFSRMERARVKPNE 176
T+MI G A G +EA+D+F ME A + PNE
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+T +A+L AC +G + LGRR + +R G E I +ID+ + G L++A ++
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDF-SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
M E W +++A +G E +I N+G IL +
Sbjct: 305 NME-ERTVVSWSAMIAGLAAHGRAEDALALFNKMI-----NTGVKPNAVTFIGILHACSH 358
Query: 297 SGKIRK-------VMRDMGVKKMP-----GC-----SYIEVSKRVHEFVAGDTSHPDFDR 339
G + K + RD G+ +P GC S + + HEF+ P+
Sbjct: 359 MGMVEKGRKYFASMTRDYGI--VPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVV 416
Query: 340 LYQIL--CKINGQMKFAEHLQNEFS 362
+L CK++ +K AE S
Sbjct: 417 WGALLGGCKVHKNVKLAEEATRHLS 441
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 234/374 (62%), Gaps = 20/374 (5%)
Query: 2 FTLSRLLYKF----------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 51
F L R Y F WN+++AGY + GD + AR +F+ M E+NV +WT ++AG+A
Sbjct: 179 FDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFA 238
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY----GLN 107
Q Q A++LF +M+ V+ D++A++AALSACA+LG + LG+WIH Y+E+ L
Sbjct: 239 QNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLP 298
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+V LNNALI MYA G + A +VFE + ++ ++W+++I G A G G EA+ +F M
Sbjct: 299 VLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLM 358
Query: 168 ---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
+ V+P+EITFI L+AC H GL+ G R F M +G+ P+IE YGCM+DLL R
Sbjct: 359 LCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSR 418
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-IKLEPHN--SGNY 281
AG L EA L+ MP + N A+WG+LL+ ++ + E+ +HL ++ P+N +G +
Sbjct: 419 AGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYF 478
Query: 282 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
+L+N+YA GRW ++ +R+ M D+GVKK G S+IE++ + F+ G+ +H D + +Y
Sbjct: 479 MLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIY 538
Query: 342 QILCKINGQMKFAE 355
++L I Q + E
Sbjct: 539 EMLGNITRQTQMGE 552
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y G L +A+ +FE +T + W +I G+ + ++I LF+RM + V+
Sbjct: 63 NHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVE 122
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN--YIEQYGLNTIVPLN----------------- 113
+ LSAC + GE IH + Y N V N
Sbjct: 123 ANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLK 182
Query: 114 -----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
N+L+ Y + G A +VF+ M ++V TWT M+AG A +G
Sbjct: 183 RARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQ 242
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM----KSRYGIEPKI 212
+ AL +F +M RA V+ +++ +A LSAC +G + LG+ + +SR+ + +
Sbjct: 243 CKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRH-LPVLV 301
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+I + G + A K+ +P + N W S++
Sbjct: 302 SLNNALIHMYASCGVMDLAYKVFEEIP-QRNTVSWSSIITG 341
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH I G + + N L+ +Y G +G A +VFE++ S W +I G
Sbjct: 46 IHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKT 105
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 215
++++++F RM A V+ N T+ +LSAC L G + + ++ + Y +
Sbjct: 106 SKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTN 165
Query: 216 GCMIDLLGRAG-----YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+I+L G L+ A L MP ++N W SLLA GD +
Sbjct: 166 --LINLYANGGDGGDFDLKRARYLFDEMP-DSNVVGWNSLLAGYVRRGDFD 213
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 213/345 (61%), Gaps = 3/345 (0%)
Query: 3 TLSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
R+L K W +M+ GY K +++A + F M K+ +SWT LI G+ Q QP +A
Sbjct: 176 VFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQA 235
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ LF +M +E +P+ I ++ LSACA +GA++LG IH Y + T + + NAL+DM
Sbjct: 236 LELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDM 295
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
YAKSG I A VFE ++ K TWTTMI+ + G GR+A+++F M R+ + PN +TF
Sbjct: 296 YAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTF 355
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+++LSAC H GL++ GR F+ M+ Y I+P++E YGCM+DLLGR G L+EAE L+ M
Sbjct: 356 VSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMD 415
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
E + IW SLL+A +G+ L E A +IK EP + G Y +L N+YA+ RW E+
Sbjct: 416 VEPDIVIWRSLLSACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALD 475
Query: 300 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+RK M + K PGCS+IEV VHEF+ D +H +Y L
Sbjct: 476 MRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKTHDARREIYVTL 520
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA+ G +A LF+ + ++IS+T+L++ + ++D +AI++F +PD A
Sbjct: 63 YAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAA 122
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------------- 125
+ ALSA LG +G +H I + GL++ + + NAL+DMY + GK
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 126 ------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+ AL F M KS ++WT +I G +AL++F +M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+PN IT + +LSAC +G ++LGR S+ I ++D+ ++G
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAIHG-YGSKSNATTNIIVTNALMDMYAKSGS 301
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ A + + + +A W +++++ + G+
Sbjct: 302 IASAFSVFEEVQMK-DAFTWTTMISSFTVQGN 332
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 224/340 (65%), Gaps = 4/340 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++ A LF+ M K+ +S++ L++GY Q + +EA +FR+MQ NV+
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G+ H + G+ + + NALIDMYAK G+I + Q+
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +++W TMIAG +HGLG+EA +F M+ +P+++TFI ++SAC H GLV
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+R+F++M +YGI P++E Y M+DLL R G+L EA + ++ MP +A+ +WG+LL
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +++LG+ + +L P +GN+ +LSNI++ GR++E+ ++R + ++ G KK
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ----ILCKIN 348
PGCS+IE++ +H F+ GD SH +YQ IL IN
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDIN 713
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 7/231 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK +A +F M ++V++W ++AGYA + ++ I MQ ++
Sbjct: 168 TALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ-DDHA 226
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNY----IEQYGLNTIVPLNNALIDMYAKSGKIGK 128
P+ ++A L AQ GA+ G +H Y + V + AL+DMYAK G +
Sbjct: 227 PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVY 286
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACC 187
A +VFE M ++ +TW+ ++ G L G EA +F M + + + + L AC
Sbjct: 287 ASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACA 346
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++ + LG++ ++ ++ G+ + ++ + +AG + +A L +M
Sbjct: 347 NLSDLCLGKQLHALL-AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL+ AR LF+ + + + LI Y+ + +P+ L
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC+ L + +H + + GL+ + ++ AL+D+YAK A VF M + V+
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR------ 196
W M+AG ALHG + + M+ PN T +A+L G + GR
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 197 -RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
R ++ + G+ ++D+ + G+L A ++ M N W +L+
Sbjct: 256 VRACSLHDHKDGVLVGTA----LLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVGGFV 310
Query: 256 IYG 258
+ G
Sbjct: 311 LCG 313
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 214/348 (61%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K + +AR +F+ M EK++ISWT++I G Q P E++ LF +MQ +
Sbjct: 246 NAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFE 305
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + LSACA LG ++ G W+H YI+ + + V + L+DMYAK G I A ++
Sbjct: 306 PDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRI 365
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +K++ TW I GLA++G G+EAL F + + +PNE+TF+A+ +ACCH GLV
Sbjct: 366 FNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLV 425
Query: 193 ELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GR+YFN M S Y + P +E YGCM+DLL RAG + EA +L++ MP + I G+LL
Sbjct: 426 DEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALL 485
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ N YG+V + L+ L +E +SG Y +LSN+YA +W E +R++M+ G+ K
Sbjct: 486 SSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISK 545
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S I V HEF+ GD SHP + +Y +L + Q+ H+
Sbjct: 546 APGSSIIRVDGMSHEFLVGDNSHPQSEEIYVLLNILANQIYLEGHINT 593
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 140/251 (55%), Gaps = 15/251 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y+ GD A +FE M ++V+SWT LI+GY + NEAI+LF RM NV+
Sbjct: 148 NTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFLRM---NVE 204
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ ++ L AC +LG + LG+ IH + + YG +V NA++DMY K + A
Sbjct: 205 PNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVV--CNAVLDMYMKCDSVTDAR 262
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K +I+WT+MI GL RE+LD+FS+M+ + +P+ + ++LSAC +G
Sbjct: 263 KMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLG 322
Query: 191 LVELGR---RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
L++ GR Y + + ++ + ++D+ + G + A+++ MP N W
Sbjct: 323 LLDCGRWVHEYIDCHRIKWDVHIGTT----LVDMYAKCGCIDMAQRIFNGMP-SKNIRTW 377
Query: 248 GSLLAASNIYG 258
+ + I G
Sbjct: 378 NAYIGGLAING 388
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
LI+GYA P AI ++R PD A L +CA+ + H+ + G
Sbjct: 80 LISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVKTG 139
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L + + N L+ +Y+ G A +VFE+M + V++WT +I+G GL EA+ +F
Sbjct: 140 LWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFL 199
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGR 224
RM V+PN TF++IL AC +G + LG+ + K YG E + ++D+ +
Sbjct: 200 RMN---VEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVV--CNAVLDMYMK 254
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ +A K+ MP E + W S++
Sbjct: 255 CDSVTDARKMFDEMP-EKDIISWTSMIGG 282
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 212/333 (63%), Gaps = 3/333 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W ++V+GY++ G ++ A +FELM +KN +SW +IA + + ++ EA LFRRM+VE
Sbjct: 169 WTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEK 228
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++ D LSAC +GA+E G WIH Y+E+ G+ L +IDMY K G + KA
Sbjct: 229 KMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKA 288
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCH 188
VF +K K V +W MI G A+HG G +A+ +F ME A V P+ ITF+ +L+AC H
Sbjct: 289 FHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAH 348
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE G YF M +GI+P E YGCM+DLL RAG L+EA+K++ MP +AA+ G
Sbjct: 349 SGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLG 408
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL A I+G++ELGE +I+L+P NSG Y IL N+YA G+W + +RK+M D G
Sbjct: 409 ALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRG 468
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
VKK PG S IE+ V+EFVAG HP + +Y
Sbjct: 469 VKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIY 501
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y K G L+ A +F + K V SW +I G+A + +AI LF+ M+ E
Sbjct: 270 KLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEE 329
Query: 70 N-VKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIG 127
V PD I + L+ACA G VE G + Y ++ +G++ ++D+ A++G++
Sbjct: 330 AMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLE 389
Query: 128 KALQVFENMK-NKSVITWTTMIAGLALHG---LGRE 159
+A +V + M + ++ +HG LG E
Sbjct: 390 EAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEE 425
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEIAM 78
+K GD+N A LF + + + TL + + Q P+ ++ + M V P+
Sbjct: 47 SKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTF 106
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ + AC E + +H ++ ++G N LI +Y G + A +VF M +
Sbjct: 107 PSLIRACK---LEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSD 163
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+V++WT++++G + GL EA +F M K N +++ A+++
Sbjct: 164 PNVVSWTSLVSGYSQWGLVDEAFRVFELMP---CKKNSVSWNAMIAC 207
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 49/208 (23%)
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY-----AKSGKIGKALQVFENMKN 138
AC+ + V+ H+ + + GL+T N+A+ ++ +K G I AL++F + N
Sbjct: 11 ACSSMAEVKQQ---HSLLLRLGLSTN---NHAMSRIFTFCSLSKHGDINYALKLFTTLPN 64
Query: 139 KSVITWTTMI-AGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC----------C 187
+ T+ A +L +L +S M + V PN TF +++ AC
Sbjct: 65 PDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQLHA 124
Query: 188 HV----------------------GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
HV G ++ RR F M +P + + ++ +
Sbjct: 125 HVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS-----DPNVVSWTSLVSGYSQW 179
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G + EA ++ MP + N+ W +++A
Sbjct: 180 GLVDEAFRVFELMPCKKNSVSWNAMIAC 207
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 214/332 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y+K GD+++AR LF M++K +SWT +I+ YA+ +EA+TLF M+ K
Sbjct: 296 NTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEK 355
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +LA +S C Q GA+ELG+WI NY GL V + NALIDMYAK G A ++
Sbjct: 356 PDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKEL 415
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M N++V++WTTMI AL+G ++AL++F M +KPN ITF+A+L AC H GLV
Sbjct: 416 FYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLV 475
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G FN+M +YGI P I+ Y CM+DLLGR G+L+EA ++++ MPFE ++ IW +LL+
Sbjct: 476 ERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLS 535
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G +E+G+ + L +LEP + Y ++NIYA W IR+ M+ + V+K
Sbjct: 536 ACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKS 595
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S I+V+ + F D HP+ +Y +L
Sbjct: 596 PGQSIIQVNGKPTIFTVEDRDHPETLYIYDML 627
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 141/253 (55%), Gaps = 8/253 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++A Y+K G+L +A LF+ + ++V+SW ++IA YA ++ +A+ ++ M
Sbjct: 193 NTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGG 252
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD +L LS+C Q A+ G +H++ + G ++ V + N LI MY+K G + A
Sbjct: 253 FSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSAR 312
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F M +K+ ++WT MI+ A G EA+ +F+ ME A KP+ +T +A++S C G
Sbjct: 313 FLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTG 372
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI--WG 248
+ELG ++ + G++ + +ID+ + G +A++L M AN + W
Sbjct: 373 ALELG-KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTM---ANRTVVSWT 428
Query: 249 SLLAASNIYGDVE 261
+++ A + GDV+
Sbjct: 429 TMITACALNGDVK 441
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 38 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
+ +W + A+ LFR+M+ + P+ L ACA+L + + I
Sbjct: 16 STLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQII 75
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H ++ + + + + A +DMY K G++ A VF M + + +W M+ G A G
Sbjct: 76 HAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFL 135
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHV-GLVELGRRY-FNIMKSRYGIEPKIEQY 215
+ M + ++P+ +T + ++ + V L LG Y F I R G+ +
Sbjct: 136 DRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGI---RIGVHMDVSVA 192
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-WGSLLAA 253
+I + G L AE L + + + W S++AA
Sbjct: 193 NTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAA 231
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G L +A +F M +++ SW ++ G+AQ + L R M++ ++PD + +
Sbjct: 98 YVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTV 157
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L + + ++ ++ ++++ + G++ V + N LI Y+K G + A +F+ + +
Sbjct: 158 LLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINS 217
Query: 139 --KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+SV++W +MIA A +A++ + M P+ T + +LS+C ++
Sbjct: 218 GLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSC-----MQPKA 272
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLL----GRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++ +G++ + C+++ L + G + A L M + W +++
Sbjct: 273 LFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMS-DKTCVSWTVMIS 331
Query: 253 A 253
A
Sbjct: 332 A 332
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
+T++ W TM+ A GD+ +A LF +M E
Sbjct: 417 YTMANRTVVSWTTMITACALNGDVKDALELFFMMLEM----------------------- 453
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMY 120
+KP+ I LA L ACA G VE G E + ++YG+N + + ++D+
Sbjct: 454 --------GMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLL 505
Query: 121 AKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
+ G + +AL++ ++M W+ +++ LHG
Sbjct: 506 GRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHG 541
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-R 197
++ TW + L G + AL +F +M+++ + PN TF +L AC + + +
Sbjct: 16 STLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQII 75
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ +++KS + + I +D+ + G L++A + MP + A W ++L
Sbjct: 76 HAHVLKSCF--QSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVR-DIASWNAMLLGFAQS 132
Query: 258 GDVELGECALQHL 270
G ++ C L+H+
Sbjct: 133 GFLDRLSCLLRHM 145
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 216/334 (64%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W+ M+ GYAK+GD+ AR LF+ M +K+V+++ T++AGYAQ EA+ +F MQ + N
Sbjct: 290 WSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSN 349
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PDE ++ ALSA +QLG VE +HNY + G++ + ALIDMY+K G I A+
Sbjct: 350 LSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAI 409
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K + W MI+G+A +GLG+ A M M R VKP+ ITFI +L+AC H G
Sbjct: 410 LIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAG 469
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G F +M+ + +EPK++ YGCM+D+LG+AG ++ A K + MP E N IW +L
Sbjct: 470 LVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTL 529
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A + + +GE +HL+ ++ NS +Y +LSNIYA LG W+ + K+R +M+ +
Sbjct: 530 LSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLT 589
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+PGCS+IE+ VHEF+ D SHP +Y +L
Sbjct: 590 KVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVL 623
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 24/274 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQM-DQPNEAITLFRRMQV 68
+N+M+ GY K G ++ AR LF+ M +KN+ISW +++ G+AQ D A+ LF +M
Sbjct: 194 YNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMP- 252
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ D ++ + A+ G +E + N + + ++ +N +ID YAK G I
Sbjct: 253 ---ERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPK---RDVISWSN-MIDGYAKLGDIKV 305
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACC 187
A +F+ M +K V+ + T++AG A +G EAL++F M+R + + P+E T + LSA
Sbjct: 306 ARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAIS 365
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYG----CMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+G VE N Y +E I G +ID+ + G ++ A + + +
Sbjct: 366 QLGHVEKAASMHN-----YFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVD-QKG 419
Query: 244 AAIWGSLLA--ASNIYGDVELGECALQHLIKLEP 275
W ++++ A N G + G H + ++P
Sbjct: 420 IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKP 453
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W +I Y+ ++P A+ LF M D+ + L ACA++ VE G+ IH +
Sbjct: 93 WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLM 152
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-------------------------- 136
+ + + + L N LI MY + G I A QVF+ M
Sbjct: 153 KLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARE 212
Query: 137 -------KNKSVITWTTMIAGLAL--HGLGREALDMFSRM-ERARVKPNEITFIAILSAC 186
++K++I+W +M+ G A G+G AL++F +M ER V N T I + C
Sbjct: 213 LFDSMPLEDKNLISWNSMLGGFAQTKDGIGL-ALELFEKMPERDLVSWN--TIIGGFAKC 269
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
G +E FN M R + + MID + G ++ A L MP
Sbjct: 270 ---GRIEFAHSLFNRMPKR-----DVISWSNMIDGYAKLGDIKVARTLFDEMP 314
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 216/346 (62%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD AR F V+S+ +IA + +P EA+ LFR MQ + + P
Sbjct: 173 TLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNP 232
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA++LG W+H+Y+ + GL ++V ++ AL+DMYAK G + A+ VF
Sbjct: 233 TPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVF 292
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M+++ W+ MI A HG GREA+ +F M++ +KP++ITF+ +L AC H GLV
Sbjct: 293 QGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVS 352
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G RYF+ MK +GI P I+ YGC+ DLL R+G L+ A K + +P +W +LL+A
Sbjct: 353 EGLRYFDDMKD-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSA 411
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+GDVELG+ + +++L+ + G+Y I SN+ A G W E ++RK+M D GV K+P
Sbjct: 412 CGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVP 471
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IE+ VHEF AGD HP +++ ++ Q+K ++ +
Sbjct: 472 GCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPD 517
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 8/240 (3%)
Query: 25 LNNARALFELMTEKNVISW-TTLIAGYAQMDQPNEA-----ITLFRRMQVENVKPDEIAM 78
L AR +F+ +T+ + W TL+ GYA+ + + + +F RM E V PD
Sbjct: 77 LAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTF 136
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L ACA A E G H + G + LI+MYA+ G A F
Sbjct: 137 VSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADG 196
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V+++ MIA EAL +F M+ + P +T I++LSAC +G ++LGR
Sbjct: 197 DCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWL 256
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ ++ + G+ ++ ++D+ + G L++A + + M A W ++ A +G
Sbjct: 257 HDYVR-KLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQA-WSVMIVAYANHG 314
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K +V YAK G L +A A+F+ M ++ +W+ +I YA EAI+LF M+
Sbjct: 268 LVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMK 327
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ +KPD+I L L AC+ G V G + ++ +G+ + + D+ A+SG++
Sbjct: 328 KQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLE 387
Query: 128 KALQVFENMK-NKSVITWTTMIAGLALHG 155
+A + + + N + I W T+++ HG
Sbjct: 388 RAYKFIDELPINPTPILWRTLLSACGGHG 416
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 219/350 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K ++ A +FE + K ++SW +I GYAQ + NEAI F +MQ++N+K
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK 475
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + A A+L + +WIH + + L+ V + AL+DMYAK G + A ++
Sbjct: 476 PDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKL 535
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V TW MI G HGLG+ AL++F +M++ +KPNE+TF+ +LSAC H GLV
Sbjct: 536 FDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLV 595
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +YF MK YG+EP ++ YG M+DLLGRA L EA +++MP E +++G++L
Sbjct: 596 EEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLG 655
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VELGE A + L+P + G + +L+NIYA W++ ++R M G++K
Sbjct: 656 ACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKT 715
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PG S +E+ VH F +G TSHP ++Y L + ++K A ++ + S
Sbjct: 716 PGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNS 765
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 147/260 (56%), Gaps = 5/260 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K G + AR +F+ MT K V+SW ++I GY Q P A+ +F++M E V+
Sbjct: 317 LVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMT 376
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ ++ AL ACA LG VE G ++H ++Q L + V + N+LI MY+K ++ A ++FE
Sbjct: 377 NVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFE 436
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
N+++K++++W MI G A +G EA+D F +M+ +KP+ T ++++ A + ++
Sbjct: 437 NLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ 496
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
++ + + R ++ + ++D+ + G + A KL M E + W +++
Sbjct: 497 A-KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDG- 553
Query: 255 NIYGDVELGECALQHLIKLE 274
YG LG+ AL+ K++
Sbjct: 554 --YGTHGLGKAALELFEKMK 571
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 105/178 (58%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK + A +F+ M E++++ W T+I+GYAQ A+ L RMQ E +PD I +
Sbjct: 220 YAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITI 279
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L A A +G++ +G IH Y + G + V ++ AL+DMY+K G +G A +F+ M
Sbjct: 280 VSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG 339
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K+V++W +MI G +G A+++F +M +V+ +T + L AC +G VE GR
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F +V+ + K G L+ A +F+ + +K + T++ GYA+ ++A++ F RM+ +
Sbjct: 111 FQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG 170
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+P L C + G+ IH + G + V +++MYAK + +A
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + ++ W T+I+G A +G G+ AL++ RM+ +P+ IT ++IL A VG
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ +GR R G E + ++D+ + G + A + RM + + W S+
Sbjct: 291 SLRIGRSIHG-YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVS-WNSM 348
Query: 251 LAASNIYGD 259
+ GD
Sbjct: 349 IDGYVQNGD 357
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 205/304 (67%), Gaps = 1/304 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ K G+++ LF M+E++++SW T+I+ AQ + EA+ LF++M+
Sbjct: 176 WNLMIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGF 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKAL 130
KPDE+ ++ L C++LGA+E+G+ IH+Y G L I + N+LID Y K G I KA
Sbjct: 236 KPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAY 295
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M KSV++W T+I G AL+G G A+D+F M + +KPN+ TF+A+L+AC H G
Sbjct: 296 NIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSG 355
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E GR F+ M Y I+PK+E +GCM+DLLGR G ++EA KL++ MP + NA +WG++
Sbjct: 356 LLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAV 415
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +G+++L E A++ LI LEP NSGNY +LSN+ A GRW E +R+ MR+ VK
Sbjct: 416 LGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVK 475
Query: 311 KMPG 314
K PG
Sbjct: 476 KAPG 479
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A LF N+ + ++I ++ ++++ LF M+ + PD+ L +CA
Sbjct: 60 ADRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCAN 119
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L LG+ + + + + G + ++++Y K+ A ++F+ M ++ V+ W M
Sbjct: 120 LCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLM 179
Query: 148 IAGLALHG-------LGR------------------------EALDMFSRMERARVKPNE 176
I G G L R EAL++F +ME KP+E
Sbjct: 180 IRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDE 239
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+T + +L C +G +E+G+R + S+ + +ID + G +++A + +
Sbjct: 240 VTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQ 299
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
+M ++ + W +++ + G E + K L+P+++ A+L+
Sbjct: 300 KMTCKSVVS-WNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLT 349
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 34/253 (13%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GL+ + I + A +I A ++F N ++ + ++I +L
Sbjct: 28 IHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSLSVP 87
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG--------RRYFNIMKS-RYG 207
++L +FS M+ R+ P++ TF +L +C ++ LG RR F S R G
Sbjct: 88 FHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIG 147
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ +E Y C +++A K+ M + +W ++ G+V+ G C
Sbjct: 148 V---VELYVC-------CEKMEDAWKMFDEMS-HRDVVVWNLMIRGFCKTGNVDFGLCLF 196
Query: 268 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 317
+ ++ + ++ + + A R E+ ++ + M + G K +P CS
Sbjct: 197 R---QMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLG 253
Query: 318 -IEVSKRVHEFVA 329
+EV +R+H + +
Sbjct: 254 ALEVGQRIHSYAS 266
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 226/340 (66%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ + A+ +F + KNV+SW LIAG+A+ + + LF +M + +
Sbjct: 245 SSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFE 304
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + +ACA G++E G+W+H ++ + G I + N LIDMYAKSG I A +V
Sbjct: 305 PTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKV 364
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W ++I+G A HGLG EAL +F +M +A+V+PNEITF+++L+AC H GL+
Sbjct: 365 FRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLL 424
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+ YF +MK ++ IE ++ + ++DLLGRAG L EA K + MP + AA+WG+LL
Sbjct: 425 DEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLG 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++ +++LG A + + +L+PH+SG + +LSNIYA GR +++ K+RK+M++ GVKK
Sbjct: 484 SCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKE 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++E+ VH FVA D SHP + + ++ KI+G++K
Sbjct: 544 PACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 583
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 145/257 (56%), Gaps = 7/257 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G L A+ LF+ M K+++SWT LI+GY+Q Q +EA+ LF +M +
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + L A + G +H + +YG + V + ++L+DMYA+ + +A +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ K+V++W +IAG A G G + +F +M R +P T+ ++ +AC G +
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSL 323
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + +++KS G +P +ID+ ++G +++A+K+ RR+ + + W S++
Sbjct: 324 EQGKWVHAHVIKS--GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSII 380
Query: 252 AASNIYGDVELGECALQ 268
+ +G LG ALQ
Sbjct: 381 SGYAQHG---LGAEALQ 394
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+++P+ L+ C L ++ G IH +I+ + L N +++MYAK G + +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F+ M K +++WT +I+G + G EAL +F +M +PNE T ++L A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASG-T 218
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + R + +YG + + ++D+ R +++EA+ + + + N W +
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNA 277
Query: 250 LLAASNIYGDVE 261
L+A G+ E
Sbjct: 278 LIAGHARKGEGE 289
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 229/344 (66%), Gaps = 10/344 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V+ YA G++ AR LF+ M E++V+SWT +I+GY+ EA+ LF +++ +
Sbjct: 292 WTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGM 351
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLN----NALIDMYAKSGKI 126
KPDE+A++AALSACA+LGA+ELG IH QY G N +N +A++DMYAK G I
Sbjct: 352 KPDEVAVVAALSACARLGALELGRRIH---RQYAGENWTCSINRGFTSAVVDMYAKCGSI 408
Query: 127 GKALQVFENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
AL VF + K+ + ++I+GLA HG G A ++F M +KP+ ITF+A+LS
Sbjct: 409 DIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLS 468
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ G++ F M + YG+ P++E YGCM+DLLGRAG+L EA +L+ +MPF+ANA
Sbjct: 469 ACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANA 528
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
IW +LL+A ++GDV L A L++L+ + Y +LSN+ + + +E+ +RK +
Sbjct: 529 VIWRALLSACKVHGDVALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAI 588
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
++G++K PG SY+E+++ +H+F+AGD SHP+ +L IN
Sbjct: 589 DNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLRDIN 632
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 59/322 (18%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y GD+ NA +F+ ++ +S+ T+I G+A+ + +F M+ V+
Sbjct: 157 NALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVR 216
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKI-- 126
PDE +A LS C+ L +G +H + + +G N + L N L+DMYAK G++
Sbjct: 217 PDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVL--LVNKLVDMYAKCGRLVM 274
Query: 127 ----------GKAL---------------------QVFENMKNKSVITWTTMIAGLALHG 155
GK++ ++F+ M + V++WT MI+G + G
Sbjct: 275 AETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAG 334
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
+EAL++F ++E +KP+E+ +A LSAC +G +ELGRR I + G E +
Sbjct: 335 CFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRR---IHRQYAG-----ENW 386
Query: 216 GC---------MIDLLGRAGYLQEAEKLLRRMPFEANAA-IWGSLLAASNIYGDVELGEC 265
C ++D+ + G + A + R+ + ++ S+++ +G E +
Sbjct: 387 TCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKN 446
Query: 266 ALQH--LIKLEPHNSGNYAILS 285
+ L+ L+P N A+LS
Sbjct: 447 LFEEMGLLGLKPDNITFVAVLS 468
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 19/318 (5%)
Query: 30 ALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRRMQVENVKPDEIAMLAALSACAQ- 87
LF +T ++ W +I Y+Q+ P + +LF+ M +V PD L ACA
Sbjct: 70 TLFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129
Query: 88 -LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
+ A + G +H ++ + G + V +NNAL++ Y G + A +VF+ + +++ T
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
MI G A G +F M V+P+E TF+A+LS C + +GR+ ++
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYREL 249
Query: 207 G-IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM-PFEANAAIWGSLLAASNIYGDVELGE 264
G + ++D+ + G L AE +L + P ++ A W SL++A + G+V++
Sbjct: 250 GCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKV-- 307
Query: 265 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCS 316
A + ++ + ++ + + Y+ G + E+ ++ + +G+K + C+
Sbjct: 308 -ARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACA 366
Query: 317 Y---IEVSKRVHEFVAGD 331
+E+ +R+H AG+
Sbjct: 367 RLGALELGRRIHRQYAGE 384
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 207/342 (60%), Gaps = 10/342 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV- 71
N+++ Y K+G+L AR LF+ M E++ +SW T++ GY + + N A LF +M NV
Sbjct: 154 NSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVV 213
Query: 72 ---------KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
K D+ +++ LSACA G + LG+ +H IE+ P++NALIDMYAK
Sbjct: 214 SWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAK 273
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + AL +F M K V++W +I GLA+HG G +AL +FSRM+ P+++TF+ +
Sbjct: 274 CGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGV 333
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H G V+ G YF+ M+ YG+ P++E YGCM+DLLGR G L+EA +L+ MP E
Sbjct: 334 LCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEP 393
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
NA IWG+LL A ++ L E L+K E +SGN ++LSNIYA G W+ IR
Sbjct: 394 NAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRL 453
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
M+ ++K G S IEV VHEF D SHP DR+Y+ +
Sbjct: 454 RMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 495
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A ++ + A +F + + +V+ + TLI + + +P A ++F MQ V D
Sbjct: 55 LIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCAD 114
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ V + E IH +E+ G + + N+LID Y K G++G+A ++F+
Sbjct: 115 NFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFD 174
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRME----------RARVKPNEITFIAILS 184
M + ++W T++ G G A ++F +M A +K ++ T I+ILS
Sbjct: 175 EMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILS 234
Query: 185 ACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC GL+ LG+R + +I ++R+ + +ID+ + G L+ A + M +
Sbjct: 235 ACAVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENALSIFHGM-VRKD 291
Query: 244 AAIWGSLLAASNIYGDVELGECALQ 268
W +++ ++G GE ALQ
Sbjct: 292 VVSWNAIIQGLAMHGH---GEKALQ 313
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L C+ L V+ IH + + L+ + LI ++ ++ A+ VF +++
Sbjct: 21 ISDLHRCSSLNQVK---QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQD 77
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V+ + T+I + A +F M+ + V + T+ +L AC G+ +
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS-------GKVW 130
Query: 199 FNIMKSRYGIEPKIEQYG---------CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+++ I ++E+ G +ID + G L EA +L MP E + W +
Sbjct: 131 VRVVEM---IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMP-ERDTVSWNT 186
Query: 250 LL 251
+L
Sbjct: 187 IL 188
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 221/340 (65%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + +A ++F M K++ISW T+I GY++ PNEA++LF M +E +K
Sbjct: 138 NALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MK 196
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L ACA L +++ G+ +H +I + G + + NAL+DMY K G A +
Sbjct: 197 PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLL 256
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +ITWT MIAG +HG G A+ F+ M +A ++P+E++FI+IL AC H GL+
Sbjct: 257 FDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLL 316
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+FN+M+ ++PK+E Y C++DLL R+G L A K ++ MP E +A IWG+LL+
Sbjct: 317 DEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLS 376
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DV+L E +H+ +LEP N+G Y +L+N YA +W E K+R+ + G+KK
Sbjct: 377 GCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKN 436
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV +VH F+AG++SHP ++ +L ++ +MK
Sbjct: 437 PGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMK 476
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 139/249 (55%), Gaps = 5/249 (2%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F NT++ YAK G L+ A +F+LM+ + V++WT+LIA YA+ +EAI LF M E
Sbjct: 35 FCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG 94
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PD + L ACA G++E G+ +HNYI + + + + + NAL+DMYAK G + A
Sbjct: 95 VSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDAN 154
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M K +I+W TMI G + + L EAL +F M +KP+ T IL AC +
Sbjct: 155 SVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLA 213
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
++ G+ + +I+++ + + ++ ++D+ + G A L +P + + W
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVAN--ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTV 270
Query: 250 LLAASNIYG 258
++A ++G
Sbjct: 271 MIAGYGMHG 279
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ L ACA G V LG +H + ++ N L+DMYAK G + A+ VF+ M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
++V+TWT++IA A GL EA+ +F M+R V P+ T +L AC G +E G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA----- 252
N ++ ++ I ++D+ + G +++A + MP + + W +++
Sbjct: 121 VHNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYSKN 178
Query: 253 -----ASNIYGDVEL 262
A +++GD+ L
Sbjct: 179 SLPNEALSLFGDMVL 193
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 221/351 (62%), Gaps = 4/351 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N + G ++ G ++ A +F L E+ NV+SWT++IAG AQ + EA+ LFR MQV
Sbjct: 322 NAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
VKP+ + + + L AC + A+ G H + + L V + +ALIDMYAK G+I
Sbjct: 382 AGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKM 441
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ VF M K+++ W +++ G ++HG +E + +F + R R+KP+ I+F ++LSAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
VGL + G +YFN+M YGI+P++E Y CM++LLGRAG LQEA L++ +PFE ++ +WG
Sbjct: 502 VGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWG 561
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL + + +V+L E A Q L LEP N G Y ++SNIYA G W E IR M +G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+KK PGCS+I+V +V+ +A D SHP D++ + + +I+ +M+ + H N
Sbjct: 622 LKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPN 672
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
+ ++ GYA+ G L + M E N++SW +++G+ + EA+ +F++M
Sbjct: 186 SALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH 245
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--- 125
PD++ + + L + + +G IH Y+ + GL + +A++DMY KSG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYG 305
Query: 126 ----------------------------IGKALQVFENMKNK----SVITWTTMIAGLAL 153
+ KAL++F K + +V++WT++IAG A
Sbjct: 306 IIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQ 365
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+G EAL++F M+ A VKPN +T ++L AC ++ + GR R + +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF-AVRVHLLDDVH 424
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G ++ ++ + MP + N W SL+ +++G
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTK-NLVCWNSLMNGYSMHG 468
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A Y+ N+A + + + + V S+++LI + +++I +F RM + PD
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ CA+L A + G+ IH GL+ + +L MY + G++G A +VF+
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M K V+T + ++ G A G E + + S ME++ ++PN +++ ILS
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSG 226
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 212/332 (63%), Gaps = 2/332 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+K DL+NA +F+ M ++++ W ++I G+AQ NEA+ LF+RM+
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFL 250
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + + L AC L +ELG +H ++ ++ + I LNNALIDMY K G + A
Sbjct: 251 ADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLI--LNNALIDMYCKCGSLEDANSA 308
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K VI+W+TM+AGLA +G R+AL++F M+ + +PN IT + +L AC H GLV
Sbjct: 309 FSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLV 368
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF MK +G++P E YGC+IDLLGRAG L EA KL+ M E ++ W +LL
Sbjct: 369 EKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLG 428
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +V+L A + +I+LEP ++G Y +LSNIYA RW + ++RK M + G++K
Sbjct: 429 ACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKT 488
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IEV K++H F+ GDTSHP + + Q L
Sbjct: 489 PGCSWIEVDKQIHVFILGDTSHPKIEEIVQRL 520
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 131/242 (54%), Gaps = 10/242 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y K L A LF+ M E+NV+SWTT+I+ Y+ ++A+ M E V+
Sbjct: 94 NTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVR 152
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L AC L + +H I + GL + V + +ALID+Y+K + AL V
Sbjct: 153 PNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGV 209
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++ W ++I G A + G EAL++F RM+RA ++ T ++L AC + L+
Sbjct: 210 FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL 269
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELGR+ + +++K + + +ID+ + G L++A RM E + W +++
Sbjct: 270 ELGRQVHVHVLK----FDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMV 324
Query: 252 AA 253
A
Sbjct: 325 AG 326
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M+ V D I + C+ GAV+ G+ +H +I G + + N L++MY K
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ +A +F+ M ++V++WTTMI+ + + L +AL M R V+PN T+ ++L A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C GL L + + I+K+ G+E + +ID+ + L A + MP +
Sbjct: 165 C--DGLPNLRQLHCGIIKT--GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR-DLV 219
Query: 246 IWGSLLAA 253
+W S++
Sbjct: 220 VWNSIIGG 227
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 222/342 (64%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W +M+ GY + D + A +F+ M E++VISW ++IA YAQ E++ +F RM +
Sbjct: 145 WTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGE 204
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ + + + A L ACA G+ LG+ IH+ + + GL + V + ++IDMY K GK+ A
Sbjct: 205 INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 264
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ F+ M+ K+V +W+ M+AG +HG +EAL++F M A VKPN ITF+++L+AC H G
Sbjct: 265 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E G +F M + +EP +E YGCM+DLLGRAGYL+EA L++ M + +WG+L
Sbjct: 325 LLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGAL 384
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ +V+LGE + + L +L+P N G Y +LSNIYA GRW + ++R +M++ G+
Sbjct: 385 LGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLV 444
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K PG S +++ RVH F+ GD HP +++Y+ L K++ +++
Sbjct: 445 KPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQ 486
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 35/265 (13%)
Query: 27 NARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N LF +K NV SW ++IA A+ EA+ F M+ ++KP+ A+ +C
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 86
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI------------------- 126
+ L + G H +G + +++AL+DMY+K G++
Sbjct: 87 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 146
Query: 127 ------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVK 173
+AL+VF+ M + VI+W ++IA A +G+ E++++F RM + +
Sbjct: 147 SMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
N +T A+L AC H G LG+ + + + G+E + +ID+ + G ++ A K
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSIIDMYCKCGKVEMARK 265
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
RM E N W +++A ++G
Sbjct: 266 AFDRMR-EKNVKSWSAMVAGYGMHG 289
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 212/340 (62%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ + GDL +A LF M E++++SW T+IAG+ Q + A F+ MQ VK
Sbjct: 547 NALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVK 606
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I L+ACA A+ G +H I + L+ V + LI MY K G I A V
Sbjct: 607 PDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLV 666
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N+ K+V +WT+MI G A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL+
Sbjct: 667 FHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLI 726
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +F MK + IEP++E YGCM+DL GRAG L EA + + +M + ++ +WG+LL
Sbjct: 727 KEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLG 785
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ DVEL E Q ++L+P++ G Y ILSNIYA G W E K+RKVM D GV K
Sbjct: 786 ACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKK 845
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV RVH F + D +HP + ++ L +++ +MK
Sbjct: 846 PGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMK 885
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 173/312 (55%), Gaps = 17/312 (5%)
Query: 4 LSRLLYKFWNT-------MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 56
S +L W+T ++ + K G +++A +F + +++I+WT++I G A+ Q
Sbjct: 228 FSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQF 287
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
+A LF+ M+ E V+PD++A ++ L AC A+E G+ +H +++ GL+T + + AL
Sbjct: 288 KQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTAL 347
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
+ MY K G + AL+VF +K ++V++WT MIAG A HG EA F++M + ++PN
Sbjct: 348 LSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 177 ITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF++IL AC ++ GR+ + I+K+ Y + ++ ++ + + G L +A +
Sbjct: 408 VTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRT--ALLSMYAKCGSLMDARNVF 465
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAI--- 290
R+ + N W +++ A + + Q L+K ++P +S +IL+ +
Sbjct: 466 ERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDAL 524
Query: 291 -LGRWNESGKIR 301
LG+W +S IR
Sbjct: 525 ELGKWVQSLIIR 536
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 143/250 (57%), Gaps = 2/250 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++ YAK G+ N+A+ +F+ M +K+V SW L+ GY Q + EA L +M + V
Sbjct: 142 WNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGV 201
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ + L+ACA V+ G + + I G +T + + ALI+M+ K G + AL+
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF N+ + +ITWT+MI GLA H ++A ++F ME V+P+++ F+++L AC H
Sbjct: 262 VFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G+R MK G++ +I ++ + + G +++A ++ + N W +++
Sbjct: 322 LEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR-NVVSWTAMI 379
Query: 252 AASNIYGDVE 261
A +G +E
Sbjct: 380 AGFAQHGRME 389
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 134/246 (54%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YAK G L +AR +FE ++++NV++W +I Y Q ++ + A+ F+ + E +K
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ C A+ELG+W+ + I + G + + + NAL+ M+ G + A+ +
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M + +++W T+IAG HG + A D F M+ + VKP++ITF +L+AC +
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEAL 625
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GRR ++ + ++ + +I + + G + +A + +P + N W S++
Sbjct: 626 TEGRRLHALI-TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMIT 683
Query: 253 ASNIYG 258
+G
Sbjct: 684 GYAQHG 689
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 9 YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++ + T +G G N E + KN + ++ Q +EA+ + +
Sbjct: 44 FRLYTTSFSGSYSKGQGN------EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDS 97
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+++ + L C + + GE IHN+I+ + + + N LI MYAK G
Sbjct: 98 PHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNS 157
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A Q+F+ M +K V +W ++ G H EA + +M + VKP++ TF+ +L+AC
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
V+ G F+++ + G + + +I++ + G + +A K+ +P + W
Sbjct: 218 AKNVDKGGELFSLILNA-GWDTDLFVGTALINMHIKCGGVDDALKVFNNLP-RRDLITWT 275
Query: 249 SLLAA 253
S++
Sbjct: 276 SMITG 280
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 216/347 (62%), Gaps = 1/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E +
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL V
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 344
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N+ K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV
Sbjct: 345 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 404
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL
Sbjct: 405 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 464
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+
Sbjct: 465 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 524
Query: 313 -PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
PG S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 525 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 44/265 (16%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y+ G + AR +F+ M E++ I+WTT+++ Y ++ + A +L +M +
Sbjct: 160 KIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 219
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
N A S C LI+ Y G + +A
Sbjct: 220 N---------EATSNC------------------------------LINGYMGLGNLEQA 240
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F M K +I+WTTMI G + + REA+ +F +M + P+E+T ++SAC H+
Sbjct: 241 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 300
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G++E+G+ ++ + G + ++D+ + G L+ A + +P + N W S
Sbjct: 301 GVLEIGKE-VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNS 358
Query: 250 LLAASNIYGDVELGECALQHLIKLE 274
++ +G + AL+ K+E
Sbjct: 359 IIEGLAAHG---FAQEALKMFAKME 380
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N + L+ A + M E NV + L G+ P ++ L+ RM +
Sbjct: 61 RLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 120
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P + + A + A GE + +I ++G V + LID Y+ +G I +A
Sbjct: 121 SVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREA 178
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS--RMERARVKPNEITFIAILSACC 187
+VF+ M + I WTTM++ R LDM S + + NE T +++
Sbjct: 179 RKVFDEMPERDDIAWTTMVSAY------RRVLDMDSANSLANQMSEKNEATSNCLINGYM 232
Query: 188 HVGLVELGRRYFNIM 202
+G +E FN M
Sbjct: 233 GLGNLEQAESLFNQM 247
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
LN L N I + A+ M+ +V + + G +L+++
Sbjct: 55 SLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 114
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRY-FNIMKSRYGIEPKIEQYGCMIDLLG 223
RM R V P+ T+ +++ A G +I K +G KI+ +ID
Sbjct: 115 VRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQT--TLIDFYS 170
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G ++EA K+ MP E + W ++++A
Sbjct: 171 ATGGIREARKVFDEMP-ERDDIAWTTMVSA 199
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 220/348 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G + AR +F+ M ++ +SW+T+I GY + +P A+ +F+ M + V
Sbjct: 202 WNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGV 261
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E A++ ALSA AQLG +E G+++H +++ G+ V L ALIDMY+K G + A +
Sbjct: 262 KANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKE 321
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + V W +MI GLA HGLG +A+ +F + P ITF+ +L+AC GL
Sbjct: 322 VFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGL 381
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GRRYF +M +Y IE ++E YGCM+DLL RAG +QEA +L+ M + +WG++L
Sbjct: 382 VDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTIL 441
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +G V+LG LI+L+P + G Y +L++IYA +W+E K+RK+M + G K
Sbjct: 442 SACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSK 501
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S +E VH+F+ GD +H D R+Y +LC IN ++ A ++ +
Sbjct: 502 SAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPD 549
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 216/347 (62%), Gaps = 1/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E +
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL V
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 344
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N+ K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV
Sbjct: 345 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 404
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL
Sbjct: 405 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 464
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+
Sbjct: 465 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 524
Query: 313 -PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
PG S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 525 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 44/265 (16%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y+ G + AR +F+ M E++ I+WTT+++ Y ++ + A +L +M +
Sbjct: 160 KIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 219
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
N A S C LI+ Y G + +A
Sbjct: 220 N---------EATSNC------------------------------LINGYMGLGNLEQA 240
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F M K +I+WTTMI G + + REA+ +F +M + P+E+T ++SAC H+
Sbjct: 241 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 300
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G++E+G+ ++ + G + ++D+ + G L+ A + +P + N W S
Sbjct: 301 GVLEIGKE-VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNS 358
Query: 250 LLAASNIYGDVELGECALQHLIKLE 274
++ +G + AL+ K+E
Sbjct: 359 IIEGLAAHG---FAQEALKMFAKME 380
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N + L+ A + M E NV + L G+ P ++ L+ RM +
Sbjct: 61 RLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 120
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P + + A + A GE + +I ++G V + LID Y+ +G+I +A
Sbjct: 121 SVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 178
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS--RMERARVKPNEITFIAILSACC 187
+VF+ M + I WTTM++ R LDM S + + NE T +++
Sbjct: 179 RKVFDEMPERDDIAWTTMVSAY------RRVLDMDSANSLANQMSEKNEATSNCLINGYM 232
Query: 188 HVGLVELGRRYFNIM 202
+G +E FN M
Sbjct: 233 GLGNLEQAESLFNQM 247
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
LN L N I ++ A+ M+ +V + + G +L+++
Sbjct: 55 SLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 114
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRY-FNIMKSRYGIEPKIEQYGCMIDLLG 223
RM R V P+ T+ +++ A G +I K +G KI+ +ID
Sbjct: 115 VRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQT--TLIDFYS 170
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G ++EA K+ MP E + W ++++A
Sbjct: 171 ATGRIREARKVFDEMP-ERDDIAWTTMVSA 199
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 220/349 (63%), Gaps = 4/349 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W MV+ YAK+GDL+ A+ LF+ M KN++SW +I GY + +EA+ F+ M +E
Sbjct: 277 WTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGR 336
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDE +++ +SACAQLG+VE WI ++I + + V L NALIDM+AK G +G+A
Sbjct: 337 FRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQ 396
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F M+ + +ITWTTMI+G A +GL REAL +++ M R V+ + FIA L+AC H G
Sbjct: 397 SIFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGG 456
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G FN M +Y I+P++E YGC++DLLGRAG LQEA + MP E + IW +L
Sbjct: 457 LLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTL 516
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ +G+ EL E + + +LEP NS ++SN A+ GRW+ R MR+ G++
Sbjct: 517 LSSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTSMRNWGIE 576
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
K+PG S I+V VHEF+A DT H +R +I ++G M H +
Sbjct: 577 KVPGSSLIQVGSEVHEFLAKDTRH---ERRKEIYETVDGLMALMRHTEQ 622
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 16/231 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++V Y GD A LFE M E+NV+SW T++AG+A+ A T+F RM N
Sbjct: 184 WNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVAGFARTGDMVTARTVFDRMPSRNA 243
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ +S A G VE + + ++Q + + A++ YAK G + A +
Sbjct: 244 ----VSWNLMISGYATSGDVEAARSVFDRMDQKDVVSW----TAMVSAYAKIGDLDTAKE 295
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
+F++M K++++W MI G + EAL F M R +P+E T ++++SAC +G
Sbjct: 296 LFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLG 355
Query: 191 LVELGRRYFNIMKSRYG---IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
VE Y N + S G + +ID+ + G + A+ + +M
Sbjct: 356 SVE----YCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKM 402
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--- 122
M+ + V P+ L ACA LG +H I + G + V + NAL+D+Y +
Sbjct: 101 MRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYRCGG 160
Query: 123 ---------------------------------SGKIGKALQVFENMKNKSVITWTTMIA 149
SG A+ +FE M ++V++W T++A
Sbjct: 161 GGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVA 220
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G A G A +F RM N +++ ++S G VE R F+ M +
Sbjct: 221 GFARTGDMVTARTVFDRMP----SRNAVSWNLMISGYATSGDVEAARSVFDRMDQK---- 272
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ + M+ + G L A++L MP + N W +++ N
Sbjct: 273 -DVVSWTAMVSAYAKIGDLDTAKELFDHMPVK-NLVSWNAMITGYN 316
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 220/347 (63%), Gaps = 2/347 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKN-VISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ YA+ GD +ARA+F + + V+S+ +I + +P EA+ LFR MQ + +K
Sbjct: 163 TLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLK 222
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + + LSACA LGA+ELG WIH Y+ + GL+++V +N ALIDMY K G + A+ V
Sbjct: 223 PTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDV 282
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+++ W+ MI A H GREA+ +F M++ ++P+ +TF+ +L AC H G+V
Sbjct: 283 FQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMV 342
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G +YF+ M+ YGI P I+ YGC+ DLL R+G L++A K + +P + A +W +LL+
Sbjct: 343 SEGLQYFDSMR-EYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLS 401
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +G V+LG+ + +++L+ + +Y I SN+ A G+W E ++RK+M + GV K+
Sbjct: 402 ACGSHGAVDLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKV 461
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS IE+ RVHEF AGD HP +++ ++ Q+K ++ N
Sbjct: 462 PGCSSIEIDNRVHEFFAGDGRHPQSQDARRMVDQVIEQLKLVGYVPN 508
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 20 AKVGDLNNARALFE-LMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEIA 77
A L AR +F+ + T +V+ + TL+ GYA+ D EA + RM E V PD
Sbjct: 66 AAPAHLAYARQVFDRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYT 125
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
++ L ACA A E G H + G + LI+MYA+ G A +F +
Sbjct: 126 FVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVP 185
Query: 138 N-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
N V+++ MI EAL +F M+ +KP +T ++LSAC +G +ELGR
Sbjct: 186 NGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGR 245
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++ + G++ ++ +ID+ G+ G L++A + + M
Sbjct: 246 WIHEYVR-KAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGM 286
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ Y K G L +A +F+ M ++ +W+ +I YA EAI+LF M+
Sbjct: 259 LVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMK 318
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ ++PD + L L AC+ G V G + + +YG+ + + D+ A+SG++
Sbjct: 319 KQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVPGIKHYGCVTDLLARSGQLE 378
Query: 128 KALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRM 167
KA + + + + I W T+++ HG A+D+ R+
Sbjct: 379 KAYKFIDELPIQPTAILWRTLLSACGSHG----AVDLGKRV 415
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 220/348 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G + AR +F+ M ++ +SW+T+I GY + +P A+ +F+ M + V
Sbjct: 202 WNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGV 261
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E A++ ALSA AQLG +E G+++H +++ G+ V L ALIDMY+K G + A +
Sbjct: 262 KANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKE 321
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + V W +MI GLA HGLG +A+ +F + P ITF+ +L+AC GL
Sbjct: 322 VFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGL 381
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GRRYF +M +Y IE ++E YGCM+DLL RAG +QEA +L+ M + +WG++L
Sbjct: 382 VDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTIL 441
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +G V+LG LI+L+P + G Y +L++IYA +W+E K+RK+M + G K
Sbjct: 442 SACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSK 501
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S +E VH+F+ GD +H D R+Y +LC IN ++ A ++ +
Sbjct: 502 SAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPD 549
>gi|297724409|ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group]
gi|218197444|gb|EEC79871.1| hypothetical protein OsI_21372 [Oryza sativa Indica Group]
gi|255676656|dbj|BAH93296.1| Os06g0114366 [Oryza sativa Japonica Group]
Length = 509
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 209/319 (65%), Gaps = 8/319 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN +V YAK GD A F M +KNV+SW T+++ +A+ + EA+ LF+ MQ
Sbjct: 191 WNALVDMYAKCGDAAAAHRWFRRMPVKKNVVSWNTMMSAFARAGELEEALALFQEMQAAA 250
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD+ +AAL ACAQLGA++ G W+H Y+ + G + + NAL+DMYAK G + +A
Sbjct: 251 VRPDDATFVAALGACAQLGALDTGRWLHAYMGRMGHSADGVVGNALLDMYAKCGAVDQAT 310
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M + V T+T+MI GLA+HG G +AL +F+ M+RA V PNE+T + +L+ACCH G
Sbjct: 311 EVFDGMARRDVYTYTSMILGLAMHGRGEDALSLFAGMQRAGVTPNEVTLLGVLTACCHAG 370
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G + N M EP+IE YGC++D+LGRAG L +AE+L+ MP ++A IW SL
Sbjct: 371 LVEEGLQQLNAMP-----EPRIEHYGCVVDMLGRAGRLDKAEELIAAMPVHSDALIWSSL 425
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA +GDVE E ++ ++ ++G+Y ++SN YA GR E+ K+R MR +
Sbjct: 426 LAACRAHGDVERAERVMRR--RVADADAGDYVLMSNTYASNGRHGEAVKVRGQMRRNEID 483
Query: 311 KMPGCSYIEVSKRVHEFVA 329
K+PGCS IE+ VHEF A
Sbjct: 484 KVPGCSLIEIDGVVHEFKA 502
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFE-LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
+ +V Y G+L +ARAL + ++V+S T ++ G+A+ +EA+ LF M +
Sbjct: 89 DGLVELYLARGELASARALVDGFPAGRDVVSCTAMVTGHARHGFLDEAVVLFFAMADDRC 148
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V D +A AA SACAQ+G + LG H + + + V NAL+DMYAK G A
Sbjct: 149 VAIDAVAAAAAFSACAQIGDLALGREAHRRVAERKVAMDVVAWNALVDMYAKCGDAAAAH 208
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ F M K+V++W TM++ A G EAL +F M+ A V+P++ TF+A L AC +
Sbjct: 209 RWFRRMPVKKNVVSWNTMMSAFARAGELEEALALFQEMQAAAVRPDDATFVAALGACAQL 268
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
G ++ G R+ + R G ++D+ + G + +A ++ M
Sbjct: 269 GALDTG-RWLHAYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGM 316
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREAL 161
+ GL+ + + L+++Y G++ A + + + V++ T M+ G A HG EA+
Sbjct: 78 KLGLDRRRAVRDGLVELYLARGELASARALVDGFPAGRDVVSCTAMVTGHARHGFLDEAV 137
Query: 162 DMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+F M R V + + A SAC +G + LGR + R + + + ++D
Sbjct: 138 VLFFAMADDRCVAIDAVAAAAAFSACAQIGDLALGREAHRRVAERK-VAMDVVAWNALVD 196
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G A + RRMP + N W ++++A G++E
Sbjct: 197 MYAKCGDAAAAHRWFRRMPVKKNVVSWNTMMSAFARAGELE 237
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 218/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR LFE M E+NVISW+ +I GY + +PNEA+ F+RM +
Sbjct: 247 WNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGI 306
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A + A++ACAQLGA+E G W+H+Y+E+ + V + ALIDMY K G++ A
Sbjct: 307 KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKL 366
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M KSV+TW MI GL HG G +A+ +F++ME R ++++ +A+L++C H GL
Sbjct: 367 IFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGL 426
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F M+ G+EPK+E YG +IDLLGRAG + +A + MP E +WGSLL
Sbjct: 427 VSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLL 486
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A+ + VEL E +++ L L +SG Y +LSNIYA G W++ +IRK+M G+KK
Sbjct: 487 ASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKK 546
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV ++HEFV G +SHP + +Y L
Sbjct: 547 NIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTL 579
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 26 NNARALFELMTE---KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
++A ++F + E ++ W TL+ +A P ++ F RM+ V PD A L
Sbjct: 65 DHADSVFAHLAEEASRHAFPWNTLVRLHAAA-SPRRSLLYFSRMRRVAVAPDAYTFPAVL 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC +G +H + GL+ + NALI Y + G +VF++ + ++
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDH-GVRDLV 182
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W +M+AG G A D+F M R R + T I G V+ R F+ M
Sbjct: 183 SWNSMVAGYVGCGEVDLAQDLFDEM-RQRDAFSWATMIDGYGEM--AGGVDRARELFDQM 239
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
R + + MID R G + EA L MP E N W + I G V
Sbjct: 240 PDR-----DLVCWNSMIDGYARHGRMDEARVLFEEMP-ERNVISWSIV-----IDGYVRF 288
Query: 263 GE 264
GE
Sbjct: 289 GE 290
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 219/325 (67%), Gaps = 2/325 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G ++ AR +FE + E++V+S T +I+GYAQ+ EA+ LFRR+Q E +K
Sbjct: 404 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 463
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + L+A + L A++LG+ +HN++ + + + V L N+LIDMY+K G + + ++
Sbjct: 464 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 523
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M ++VI+W M+ G + HG GRE L +F+ M E +VKP+ +T +A+LS C H GL
Sbjct: 524 FDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGL 583
Query: 192 VELGRRYFNIMKS-RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ G FN M S + +EPK+E YGC++DLLGR+G ++EA + +++MPFE AAIWGSL
Sbjct: 584 EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSL 643
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ +V++GE A Q L+++EP N+GNY ILSN+YA GRW + +R +M V
Sbjct: 644 LGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVT 703
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PG S IE+ + +H F A D SHP
Sbjct: 704 KEPGRSSIELDQVLHTFHASDRSHP 728
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 25/267 (9%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF----------- 63
++ Y K L +A +F+ M E+NV+SWT +I+ Y+Q ++A+ LF
Sbjct: 284 LIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGV 343
Query: 64 ---RRMQVEN-------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
++++ N +P+E L++C LG IH+ I + V +
Sbjct: 344 YAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVG 403
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
++L+DMYAK GKI +A VFE + + V++ T +I+G A GL EAL++F R++ +K
Sbjct: 404 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 463
Query: 174 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
N +T+ +L+A + ++LG++ N +++S I + +ID+ + G L +
Sbjct: 464 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE--IPSFVVLQNSLIDMYSKCGNLTYSR 521
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGD 259
++ M +E W ++L + +G+
Sbjct: 522 RIFDTM-YERTVISWNAMLVGYSKHGE 547
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
A L+ C A G+ +H ++ + V L LI +Y K +G A VF+ M +
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307
Query: 140 SVITWTTMIAGLALHGLGREALDMF-------------------SRMERARV--KPNEIT 178
+V++WT MI+ + G +AL++F S R V +PNE T
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFT 367
Query: 179 FIAILSACC-HVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
F +L++C +G + LGR+ + I+K Y E + ++D+ + G + EA +
Sbjct: 368 FATVLTSCTSSLGFI-LGRQIHSLIIKLNY--EDHVFVGSSLLDMYAKDGKIHEARTVFE 424
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN-SGNYAILSNIYAILG 292
+P E + ++++ Y + L E AL+ +L+ NY + + L
Sbjct: 425 CLP-ERDVVSCTAIISG---YAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 221/347 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y+K G + +AR +F+ M ++++SW +IAGYAQ A+ +MQ ++V
Sbjct: 672 NALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVV 731
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + ++ L+AC+ A+E G+ +H I + L V + ALI MYAK G G+A +V
Sbjct: 732 PNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEV 791
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+N+ K+V+TW MI A HGL +AL F+ ME+ +KP+ TF +ILSAC H GLV
Sbjct: 792 FDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLV 851
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + F+ M+S YG+ P IE YGC++ LLGRA QEAE L+ +MPF +AA+W +LL
Sbjct: 852 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLG 911
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G++ L E A + +KL N Y +LSN+YA GRW++ KIR+VM G++K
Sbjct: 912 ACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 971
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S+IEV +HEF+A D SHP+ +Y L +++ +M+ A + +
Sbjct: 972 PGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPD 1018
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 132/226 (58%), Gaps = 1/226 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YA+ GDL AR LF M ++++ISW +IAGYA+ + EA+ L+++MQ E VK
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + L LSACA A G+ IH I + G+ + L NAL++MY + G + +A V
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + + VI+W +MIAG A HG A +F M+ ++P+ ITF ++LS C + +
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
ELG++ + + G++ + +I++ R G LQ+A + +
Sbjct: 549 ELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 7/266 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L A+ +FE ++VISW ++IAG+AQ A LF+ MQ E ++
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + LS C A+ELG+ IH I + GL V L NALI+MY + G + A V
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +++++ V++WT MI G A G +A+++F +M+ +P + TF +IL C +
Sbjct: 590 FHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACL 649
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G++ I+ S Y ++ + +I ++G + +A ++ +MP + W ++
Sbjct: 650 DEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKII 706
Query: 252 AASNIYGDVELGECALQHLIKLEPHN 277
A Y LG+ A++ +++ +
Sbjct: 707 AG---YAQNGLGQTAVEFAYQMQEQD 729
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 152/300 (50%), Gaps = 23/300 (7%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V + GD+++A+ F+ +++V+ + LIA AQ EA + RM+ + V +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L+ L+AC+ A+E G+ IH++I + G ++ V + NALI MYA+ G + KA ++F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + +I+W +IAG A EA+ ++ +M+ VKP +TF+ +LSAC +
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA----IWGS 249
G+ + +I++S GI+ ++++ R G L EA+ + FE A W S
Sbjct: 450 GKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNV-----FEGTQARDVISWNS 502
Query: 250 LLAASNIYGDVELGECALQHLI--KLEPHNSGNYAILSNI---------YAILGRWNESG 298
++A +G E Q + +LEP N ++LS I GR ESG
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 2/244 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N++++ Y K GDL AR +F ++ ++V+S+ T++ YAQ E + LF +M E
Sbjct: 164 RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSE 223
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD++ + L A ++ G+ IH + GLN+ + + AL+ M + G + A
Sbjct: 224 GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
Q F+ ++ V+ + +IA LA HG EA + + RM V N T+++IL+AC
Sbjct: 284 KQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+E G+ + + S G ++ +I + R G L +A +L MP + + W +
Sbjct: 344 KALEAGKLIHSHI-SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNA 401
Query: 250 LLAA 253
++A
Sbjct: 402 IIAG 405
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K + +A +F+ M ++VISW +LI+ YAQ +A LF MQ
Sbjct: 66 NLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI 125
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I ++ L+AC +E G+ IH+ I + G + N+L+ MY K G + +A QV
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + V+++ TM+ A +E L +F +M + P+++T+I +L A ++
Sbjct: 186 FAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+R + G+ I ++ + R G + A++ + + + ++ +L+A
Sbjct: 246 DEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIA 303
Query: 253 ASNIYG 258
A +G
Sbjct: 304 ALAQHG 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
Q + + +A L C + + + IH + + + + L+N LI+MY K +
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A QVF+ M + VI+W ++I+ A G ++A +F M+ A PN+IT+I+IL+AC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 187 CHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+E G++ + I+K+ Y +P+++ ++ + G+ G L A ++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF 186
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 213/326 (65%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K ++ AR F+ M +++V++W+T+IAGYAQ +P+E++ LF RM+ + KP+E+ +
Sbjct: 261 YVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTL 320
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLG+ ELG I +++E L L +ALIDMY K G +G+A VF M++
Sbjct: 321 VGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEH 380
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K VITW +M+ GLAL+G ++A+ ++ M V+PNEITF+A+L+AC H GLV+ G +
Sbjct: 381 KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F MK+ + + P++E C++DLL ++G L+EA K + M E NA IW +LL+A +
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
DVEL + A L+ LEP NS Y +LSNIYA G W + +IR +MR V+K+ S+I
Sbjct: 501 DVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
E+ VH+F+ DT HP ++ ++
Sbjct: 561 ELDGEVHKFLVQDTYHPKSAEIFNVV 586
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY+K GD+ AR LF+ M + SW ++IA YA + EA+ LFRRM E +
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGAR 214
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + S CA+ G +E G+W + I + L ++ ++ AL++MY K I +A +
Sbjct: 215 PNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMI-VHTALMEMYVKCQAIDEARRE 273
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ + V+ W+TMIAG A +G E+L++F RM+ KPNE+T + +LSAC +G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG + + ++S+ P G +ID+ + G++ A + RM + W S++
Sbjct: 334 ELGGQIGSHVESQN--LPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMM 390
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G + AR++F M K VI+W +++ G A +AITL++ M E+V+
Sbjct: 356 SALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQ 415
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN---ALIDMYAKSGKIGKA 129
P+EI +A L+AC G V+ G + + E ++ + P ++D+ KSG++ +A
Sbjct: 416 PNEITFVALLTACTHAGLVDQG--MSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREA 473
Query: 130 LQVFENMK-NKSVITWTTMIAGLALHG 155
+ +M+ + + W+T+++ H
Sbjct: 474 YKFICDMEVEPNAVIWSTLLSACRAHA 500
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 7 LLYKFWNTMVAGYAKVGDLNN----------ARALFELMTEKNVISWTTLIAGYAQMDQP 56
L Y+ +AG K L++ AR LF+ + TLI+ +++
Sbjct: 7 LPYRHLPQHLAGLLKTRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSH 66
Query: 57 NEAITLFRRMQV--ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
E + F + +V P + ++ + +CA L A G+ +H + GL + +
Sbjct: 67 QELLDAFSSLHRRGSDVPPGCVPLV--VKSCAILAASRQGKQVHCHAIVRGLLGDIFVQT 124
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVI-------------------------------T 143
AL+D YAK+G + A++VF+ M K I +
Sbjct: 125 ALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSAS 184
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
W +MIA A G +EAL +F RM +PN IT + S C G +E G+
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGK 237
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 215/350 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V YA+ G + A + FE + K+ I+W L++G+AQ EA+ +F RM V
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++ALSA A L ++ G+ IH + + G + + NALI +Y K G A
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP A+A +W +LL
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++RK+MRD GV+K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
PG S+IEV VH F GD HP +++Y L IN ++ + Q ++
Sbjct: 784 EPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L AR + E++ EK+V+SWT++IAGY Q + +A+ F+ MQ + PD I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A+S CA + A+ G IH I G + V + NAL+++YA+ G+I +A FE +++
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K ITW +++G A GL EAL +F RM+++ VK N TF++ LSA ++ ++ G++
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K+ + E ++ +I L G+ G ++A+ M E N W +++ + + +
Sbjct: 570 HARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Query: 258 G 258
G
Sbjct: 627 G 627
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G A +F M ++ +++ TLI+G+AQ A+ +F MQ +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA LG ++ G +H+Y+ + G+++ + +L+D+Y K G + AL +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +V+ W M+ ++ ++F +M+ A ++PN+ T+ IL C +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG + + + + G E + G +ID+ + G+L++A ++L M E + W S++A
Sbjct: 362 DLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
Query: 253 A 253
Sbjct: 420 G 420
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F NV+ W ++ + Q++ ++ LF +MQ ++P++
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C ++LGE IH+ + G + + ++ LIDMY+K G + KA +V E +K
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K V++WT+MIAG H ++AL F M++ + P+ I + +S C + + G +
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+ I S Y + I + +++L R G ++EA
Sbjct: 469 HARIYVSGYSGDVSI--WNALVNLYARCGRIREA 500
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G + AR +FE ++ ++ +SW +++GYAQ EA+ L+R+M V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LS+C + G IH ++G + + + NA+I +Y + G A +V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M ++ +T+ T+I+G A G G AL++F M+ + + P+ +T ++L+AC +G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + + + + GI G ++DL + G ++ A + N +W +L
Sbjct: 261 QKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLV 318
Query: 253 A 253
A
Sbjct: 319 A 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 93
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMP 239
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 226/343 (65%), Gaps = 3/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+GYA G L+ AR LFE ++++ WT +I GY Q + +EA+ LFR+MQ++ +
Sbjct: 284 WTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRL 343
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD ++ L CAQ GA+E G+W+H YI + + + AL+D+YAK G + KAL+
Sbjct: 344 RPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALE 403
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF MK + +WT++I GLA++G+ +ALD FS+ME A +P++ITFI +L+AC H GL
Sbjct: 404 VFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGL 463
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN---AAIWG 248
VE GRRYF+ M Y I+PK E Y C+IDLL RAG L EAE LL +P E++ ++
Sbjct: 464 VEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYC 523
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLL+A YG++++ E + L ++E +S + +L+++YA RW + +R+ M+++G
Sbjct: 524 SLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWEDVTTVRRKMKELG 583
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
++K PGCS IEV+ +HEF+ G SH + D ++ +L ++ M
Sbjct: 584 IRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQVTKWM 626
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 35/278 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+++ Y +G + A+ +F+ + E++V+SW LI+ Y + +AI +FRRM+ E N+
Sbjct: 153 NSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNL 212
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K DE +++ LSAC+ L E+GE IH Y++ L + NAL+DMY K G + KA
Sbjct: 213 KADEATVVSTLSACSVLRNQEVGEEIHRYVDAE-LEMTTKIGNALLDMYCKCGCVDKARA 271
Query: 132 VFENMKNKSVITWTTMIAGLALHG-------------------------------LGREA 160
+F+ M NK+VI WT+M++G A +G L EA
Sbjct: 272 IFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEA 331
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L +F +M+ R++P+ + +L C G +E G+ + ++ ++D
Sbjct: 332 LKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTA-LVD 390
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G +++A ++ M E + A W S++ + G
Sbjct: 391 VYAKCGCVEKALEVFYEMK-ERDTASWTSVIYGLAVNG 427
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 8/236 (3%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + A + + ++ + +I A+ + + + LF ++ + + PD +
Sbjct: 64 GSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVF 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
A LG V GE +H Y+ + G + V N+++ MY GK+ A +VF+ + + V+
Sbjct: 124 KAMGCLGKVVEGEKVHGYVVKSGFDACVC--NSVMGMYGALGKMEVAKKVFDEIPERDVV 181
Query: 143 TWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+W +I+ H +A+ +F RM R + +K +E T ++ LSAC + E+G
Sbjct: 182 SWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRY 241
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASN 255
+ + + KI ++D+ + G + +A + M N W S+++ ASN
Sbjct: 242 VDAELEMTTKIGN--ALLDMYCKCGCVDKARAIFDEMG-NKNVICWTSMVSGYASN 294
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 215/335 (64%), Gaps = 2/335 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+A+ G + AR LF+ + K++++W T I Y + D P EA+ L ++M ++ + PD I +
Sbjct: 153 FARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITL 212
Query: 79 LAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
L + AC+ L + +L +H I + N ++ + ALID+Y K G + A +VF+ M+
Sbjct: 213 LGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ 272
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+++ITW+ MI+G +HG GREAL++F +M +A VKP+ ITF++ILSAC H GLV G
Sbjct: 273 ERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWE 331
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
FN M +G+ P+ E Y CM+D+LGRAG L EA + RMP NAA+WG+LL A I+
Sbjct: 332 CFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+V+L E + L L+PHN+G Y IL NIY + G+ E+ IR +M++ GVKK+ G S
Sbjct: 392 LNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSV 451
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
IE+ +++ FVAGD SHP D +Y L ++ +++
Sbjct: 452 IEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIR 486
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 4/246 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K +R +F+ M +KN +SW+ +I Q D+ E +LFR+M E +
Sbjct: 49 NSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSR 108
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P A+L A+ AC + + E + ++ + + GL+ + +A M+A+ G++ A ++
Sbjct: 109 PSRGAILNAM-ACVR--SHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKL 165
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + +K ++TW T I + EAL + +M + P+ IT + ++ AC +
Sbjct: 166 FDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASF 225
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+L I+ + + + +IDL + G L A K+ M E N W ++++
Sbjct: 226 QLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ-ERNIITWSAMIS 284
Query: 253 ASNIYG 258
++G
Sbjct: 285 GYGMHG 290
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PD + AC+ L E G IH + ++G + V ++N+LI MY K K +
Sbjct: 6 IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
QVF+ M +K+ ++W+ +I +E +F +M +P+
Sbjct: 66 QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPS 110
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 215/350 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V YA+ G + A + FE + K+ I+W L++G+AQ EA+ +F RM V
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++ALSA A L ++ G+ IH + + G + + NALI +Y K G A
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP A+A +W +LL
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++RK+MRD GV+K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
PG S+IEV VH F GD HP +++Y L IN ++ + Q ++
Sbjct: 784 EPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L AR + E++ EK+V+SWT++IAGY Q + +A+ F+ MQ + PD I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A+S CA + A+ G IH I G + V + NAL+++YA+ G+I +A FE +++
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K ITW +++G A GL EAL +F RM+++ VK N TF++ LSA ++ ++ G++
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K+ + E ++ +I L G+ G ++A+ M E N W +++ + + +
Sbjct: 570 HARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Query: 258 G 258
G
Sbjct: 627 G 627
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G A +F M ++ +++ TLI+G+AQ A+ +F MQ +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA LG ++ G +H+Y+ + G+++ + +L+D+Y K G + AL +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +V+ W M+ ++ ++F +M+ A ++PN+ T+ IL C +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG + + + + G E + G +ID+ + G+L++A ++L M E + W S++A
Sbjct: 362 DLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
Query: 253 A 253
Sbjct: 420 G 420
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F NV+ W ++ + Q++ ++ LF +MQ ++P++
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C ++LGE IH+ + G + + ++ LIDMY+K G + KA +V E +K
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K V++WT+MIAG H ++AL F M++ + P+ I + +S C + + G +
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+ I S Y + I + +++L R G ++EA
Sbjct: 469 HARIYVSGYSGDVSI--WNALVNLYARCGRIREA 500
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G + AR +FE ++ ++ +SW +++GYAQ EA+ L+R+M V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LS+C + G IH ++G + + + NA+I +Y + G A +V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M ++ +T+ T+I+G A G G AL++F M+ + + P+ +T ++L+AC +G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + + + + GI G ++DL + G ++ A + N +W +L
Sbjct: 261 QKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLV 318
Query: 253 A 253
A
Sbjct: 319 A 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 93
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMP 239
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 212/321 (66%), Gaps = 2/321 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ YAK G+L +AR +F+ M ++VI+W +I+GYAQ +EAI LF M+ + V
Sbjct: 263 SALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++I + A LSACA +GA++LG+ I Y Q G + + ALIDMYAKSG + A +V
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRV 382
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
F++M K+ +W MI+ LA HG +EAL +F M E +PN+ITF+ +LSAC H G
Sbjct: 383 FKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAG 442
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G R F++M + +G+ PKIE Y CM+DLL RAG+L EA L+R+MP + + G+L
Sbjct: 443 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGAL 502
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +V++GE ++ +++++P NSGNY I S IYA L W +S ++R +MR G+
Sbjct: 503 LGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGIT 562
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS+IEV +HEF AGD
Sbjct: 563 KTPGCSWIEVENHLHEFHAGD 583
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 157/259 (60%), Gaps = 3/259 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
++++ YA+ G + +AR +F+ + ++ +SW ++IAGYA+ EA+ +FR M + +
Sbjct: 161 HSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGF 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+++++ L AC +LG +ELG W+ ++ + G+ + +ALI MYAK G++ A +
Sbjct: 221 EPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARR 280
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + VITW +I+G A +G+ EA+ +F M+ V N+IT A+LSAC +G
Sbjct: 281 IFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGA 340
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG++ + S+ G + I +ID+ ++G L A+++ + MP + N A W +++
Sbjct: 341 LDLGKQ-IDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP-QKNEASWNAMI 398
Query: 252 AASNIYGDVELGECALQHL 270
+A +G + QH+
Sbjct: 399 SALAAHGKAKEALSLFQHM 417
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
A++LF RM ++ PD +CA L ++ H+ + + L++ ++LI
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEI 177
YA+ G + A +VF+ + ++ ++W +MIAG A G REA+++F M R +P+E+
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
+ +++L AC +G +ELGR + R G+ +I + + G L+ A ++
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVER-GMTLNSYIGSALISMYAKCGELESARRIFDG 284
Query: 238 M 238
M
Sbjct: 285 M 285
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 215/348 (61%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y K ++A+ +F+ M +NV++WT LIAGY Q ++ + +F M +V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + LSACA +GA+ G +H Y+ + + LID+Y K G + +A+ V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K+V TWT MI G A HG R+A D+F M + V PNE+TF+A+LSAC H GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR F MK R+ +EPK + Y CM+DL GR G L+EA+ L+ RMP E +WG+L
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++ D ELG+ A +IKL+P +SG Y +L+N+Y+ W+E ++RK M+D V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKINGQMKFAEHLQN 359
PG S+IEV ++ EF+A D P + D LY+ L + QM+ + L++
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELED 591
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++GY+ G + A LF+ +K+V++WT +I G+ + +EA+ F M+ V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E+ +++ L A ++ V G +H Y+E + V + ++L+DMY K A +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++V+TWT +IAG + + +F M ++ V PNE T ++LSAC HVG
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GRR M + IE +IDL + G L+EA + R+ E N W +++
Sbjct: 322 LHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMI 379
Query: 252 AASNIYG 258
+G
Sbjct: 380 NGFAAHG 386
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL--FRRMQVENVKPDEIAMLAALSAC 85
AR L + ++ W +LI ++ N ++ +R M+ V P L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+L ++ H +I ++GL++ + N+LI Y+ SG A ++F+ ++K V+TWT
Sbjct: 115 FKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
MI G +G EA+ F M++ V NE+T +++L A V V GR +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + ++D+ G+ +A+K+ MP N W +L+A
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAG 280
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 209/330 (63%), Gaps = 1/330 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N ++ YAK G L +A LF K+ ++W +IA Y Q EAI+ F +M++EN
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + ++ L A A L A G H I Q G + + N+LIDMYAK G++ + +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 689
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC H GL
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 749
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +WG+LL
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ ++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+G+KK
Sbjct: 810 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 869
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS++E+ +VH F GD SHP + ++
Sbjct: 870 TPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G+ A+ LF + +++++W+ +IA Q P EA++LF+ MQ + +KP+ + +
Sbjct: 374 YAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTL 433
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L ACA L ++LG+ IH + + +++ + AL+ MYAK G AL F M +
Sbjct: 434 MSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS 493
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++TW ++I G A G A+DMF ++ + + P+ T + ++ AC + ++ G
Sbjct: 494 RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI 553
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G E +ID+ + G L AE L + F + W ++AA
Sbjct: 554 HGLI-VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K GD++ AR +F+ M +++ +SW T++AGYA E + LF +M++ NV+
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++++ ++A A A+ +E G+ IH Q +++ + + L+ MYAK G+ KA Q+
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + ++ W+ +IA L G EAL +F M+ ++KPN +T ++IL AC + L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG+ + + ++ + ++ + + G+ A RM + W SL+
Sbjct: 447 KLGKS-IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLIN 504
Query: 253 ASNIYGD 259
GD
Sbjct: 505 GYAQIGD 511
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V+ YAK G A F M+ +++++W +LI GYAQ+ P AI +F ++++ +
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M+ + ACA L ++ G IH I + G + + NALIDMYAK G + A +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 133 FENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F K +TW +IA +G +EA+ F +M PN +TF+++L A ++
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G F+ + G +ID+ + G L +EKL M + + W ++L
Sbjct: 649 FREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAML 706
Query: 252 AASNIYG 258
+ ++G
Sbjct: 707 SGYAVHG 713
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K+GDL AR +F+ M +++V++W +IAG +Q + P EA+ FR MQ+ V+P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++L +L +EL IH Y+ + ++ V +N LID+Y+K G + A +VF+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFD 287
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++ ++W TM+AG A +G E L++F +M+ V+ N+++ ++ A +E
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 195 GR 196
G+
Sbjct: 348 GK 349
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR++F+ + I W ++I Y + Q NEA+ ++ M + ++PD+ L AC
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
++ G W H I++ GL V + L+DMY+K G + +A +VF+ M + V+ W M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAGL+ EA+D F M+ V+P+ ++ + + C + +EL R + R
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR-- 259
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +IDL + G + A ++ +M + + WG+++A
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
LI++Y+ K A VF++ N S I W +MI EAL+M+ M ++P+
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 176 EITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+ TF +L AC G + L +F+ R G+E + ++D+ + G L+ A ++
Sbjct: 129 KYTFTFVLKAC--TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 235 LRRMPFEANAAIWGSLLA 252
+MP + + W +++A
Sbjct: 187 FDKMP-KRDVVAWNAMIA 203
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 211/341 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G + A L + + E+ V+SW +I+G++ Q EA F +M V PD
Sbjct: 475 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 534
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L CA L VELG+ IH I + L + +++ L+DMY+K G + +FE N
Sbjct: 535 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 594
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +TW M+ G A HGLG EAL +F M+ VKPN TF+A+L AC H+GLVE G Y
Sbjct: 595 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 654
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M S YG++P++E Y C++D++GR+G + +A +L+ MPFEA+A IW +LL+ I+G
Sbjct: 655 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 714
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+ E A +++LEP +S Y +LSNIYA G WNE K+RK+MR G+KK PGCS+I
Sbjct: 715 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 774
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
E+ VH F+ GD +HP +Y+ L + +MK+ ++ +
Sbjct: 775 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 815
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYA GD+ A+ LF+ M E++V+SW +LI+GY + I +F +M
Sbjct: 111 WNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGT 170
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D L +C+ L G IH + G + V +AL+DMYAK K+ ++Q
Sbjct: 171 VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQ 230
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F +M K+ ++W+ +IAG + R L++F M++A V ++ TF ++ +C +
Sbjct: 231 FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSA 290
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ LG + + + +K+ +G + I +D+ + L +A+KL +P
Sbjct: 291 LRLGSQLHGHALKTDFGTDVVIGT--ATLDMYMKCNNLSDAQKLFNSLP 337
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ + + +FE ++ ++W ++ GYAQ EA+ +F MQ+ENVK
Sbjct: 570 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 629
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ LA L AC +G VE G + H+ + YGL+ + + ++D+ +SG++ KAL+
Sbjct: 630 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 689
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ E M + W T+++ +HG
Sbjct: 690 LIEGMPFEADAVIWRTLLSICKIHG 714
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 49/280 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L A +FE M ++ +SW +IA + Q + ++LF
Sbjct: 401 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF--------- 451
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
IHN I + GL++ V + ALIDMY+K G + KA
Sbjct: 452 ------------------------IHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAE 485
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++ + + ++V++W +I+G +L EA FS+M V P+ T+ IL C ++
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
VELG++ + I+K + I ++D+ + G +Q+ + + + P + W +
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNA 602
Query: 250 LLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 284
++ +G LGE AL+ L ++P+++ A+L
Sbjct: 603 MVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVL 639
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK L+ + F M EKN +SW+ +IAG Q D + LF+ MQ V +
Sbjct: 219 YAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTF 278
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +CA L A+ LG +H + + T V + A +DMY K + A ++F ++ N
Sbjct: 279 ASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338
Query: 139 KSVITWTTMIAGLAL--HGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVELG 195
++ ++ +I G A GLG + E++ AC + G +E
Sbjct: 339 HNLQSYNAIIVGYARSDKGLGLD----------------EVSLSGAFRACAVIKGDLEGL 382
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ + MKS + I ++D+ G+ G L EA + M +A W +++AA
Sbjct: 383 QVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHE 439
Query: 256 IYGDVE 261
G+ E
Sbjct: 440 QNGNEE 445
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K +L++A+ LF + N+ S+ +I GYA+ D+ + DE+++
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK--------------GLGLDEVSL 365
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A ACA + G +H + + + + NA++DMY K G + +A VFE M +
Sbjct: 366 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 425
Query: 139 KSVITWTTMIAGLALHGLGREALDMF--SRMERARVKPNEITFIAILSACCHVGLVELGR 196
+ ++W +IA +G + L +F +R+ ++R+ + IA++ G++E
Sbjct: 426 RDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 485
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR---MPFEANAAIWGSLLAA 253
+ + + E + + +I +EA+K + M + + + ++L
Sbjct: 486 KLHDRLA-----EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 540
Query: 254 SNIYGDVELGECALQHLIKLE 274
VELG+ +IK E
Sbjct: 541 CANLVTVELGKQIHAQIIKKE 561
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 47/242 (19%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
I+ F Q K + + C+ A+ G+ H + V + N LI M
Sbjct: 29 ISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 120 YAKS-------------------------------GKIGKALQVFENMKNKSVITWTTMI 148
Y K G IG A ++F+ M + V++W ++I
Sbjct: 87 YIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLI 146
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC----HVGLVELGRRYFNIMKS 204
+G +G R+ +D+F +M R + TF +L +C H G +++ + +
Sbjct: 147 SGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI-----HGLAV 201
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA----SNIYGDV 260
+ G + + ++D+ + L + + MP E N W +++A ++ G +
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 261 EL 262
EL
Sbjct: 261 EL 262
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 218/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR LFE M E+NVISW+ +I GY + +PNEA+ F+RM +
Sbjct: 247 WNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGI 306
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A + A++ACAQLGA+E G W+H+Y+E+ + V + ALIDMY K G++ A
Sbjct: 307 KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKL 366
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M KSV+TW MI GL HG G +A+ +F++ME R ++++ +A+L++C H GL
Sbjct: 367 IFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGL 426
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F M+ G+EPK+E YG +IDLLGRAG + +A + MP E +WGSLL
Sbjct: 427 VSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLL 486
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A+ + VEL E +++ L L +SG Y +LSNIYA G W++ +IRK+M G+KK
Sbjct: 487 ASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKK 546
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV ++HEFV G +SHP + +Y L
Sbjct: 547 NIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTL 579
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 26 NNARALFELMTE---KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
++A ++F + E ++ W TL+ +A P ++ F RM+ V PD A L
Sbjct: 65 DHADSVFAHLAEEASRHAFPWNTLVRLHAAA-SPRRSLLYFSRMRRAAVAPDAYTFPAVL 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC +G +H + GL+ + NALI Y + G +VF++ + ++
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDH-GVRDLV 182
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W +M+AG G A D+F M R R + T I G V+ R F+ M
Sbjct: 183 SWNSMVAGYVGCGEVDLAQDLFDEM-RQRDAFSWATMIDGYGEM--AGGVDRARELFDQM 239
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
R + + MID R G + EA L MP E N W + I G V
Sbjct: 240 PDR-----DLVCWNSMIDGYARHGRMDEARVLFEEMP-ERNVISWSIV-----IDGYVRF 288
Query: 263 GE 264
GE
Sbjct: 289 GE 290
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 220/348 (63%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G++ AR +F+ + K+V++W +I GYAQ EAI LF M+ E
Sbjct: 257 SALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGAS 316
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I ++ LSACA +GA+ELG + Y GL V + AL+DMY+K G + KA+QV
Sbjct: 317 PDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQV 376
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F + K+ TW +I GLA +G G EA+ F M ++P++ITFI +LSAC H GL
Sbjct: 377 FGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGL 436
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GRR+FN + S + I PKIE Y CM+DLL RAG+L+EA + ++P +A+A + G+LL
Sbjct: 437 LKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALL 496
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+ E + +++LEP NS NY + S IYA R ++S K+R +MR+ GV K
Sbjct: 497 AACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSK 556
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+PGCS++EVS +V EF AGD S D +YQ+ + +M+ ++ N
Sbjct: 557 IPGCSWVEVSGKVLEFYAGDESQHGADDMYQLHDMLIDEMRLEGYVPN 604
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 131/240 (54%), Gaps = 3/240 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
+++V Y+ +GD AR +F+ + ++V+SW ++ Y + + +FR M E V
Sbjct: 155 HSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAV 214
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ + L+AC G + LG W+ ++ + + +AL+ MY K G++ +A +
Sbjct: 215 APNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARR 274
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + +K V+ W MI G A +G+ +EA+ +F M + P++IT + +LSAC VG
Sbjct: 275 VFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGA 334
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG + S G+ + ++D+ + G L +A ++ ++P + N A W +L+
Sbjct: 335 LELGTE-LDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCK-NEATWNALI 392
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+P A+ LF RM ++PD + L A A+ H + + GL +
Sbjct: 96 RPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVH 155
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVK 173
+L+ MY+ G A +VF+ + + V++W M+ G+ + MF M + V
Sbjct: 156 SLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVA 215
Query: 174 PNEITFIAILSACCHVGLVELGR 196
PNE+T +L+AC G + LGR
Sbjct: 216 PNEVTVAVVLAACRDAGDLVLGR 238
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 215/315 (68%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y ++G+L AR LF+ M +++VISWT++I GY+Q Q ++A+ LF+ M VK
Sbjct: 164 NTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 223
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + + LSACA LG +++G +H+YI ++G+ + + N+LIDMY K G + KAL+V
Sbjct: 224 PDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEV 283
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK+K ++WT++I+GLA++G ALD+FS+M R V+P TF+ IL AC H GLV
Sbjct: 284 FHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLV 343
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G YF M+S +G+ P ++ YGC++DLL R+G + +A + +++MP + +W LL+
Sbjct: 344 NKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLS 403
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+V L E A + L++L+P +SGNY +LSN YA + RW+++ K+R++M D V+K
Sbjct: 404 ACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKP 463
Query: 313 PGCSYIEVSKRVHEF 327
G S IEV V +
Sbjct: 464 SGSSSIEVDGMVSNY 478
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 145/246 (58%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA G L A+ +F+ M +++++SW TLI GY+Q ++ E + LF M N+K
Sbjct: 63 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 122
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + M+ + AC+ LG E + + YI++ L V L N LIDMY + G + A ++
Sbjct: 123 ADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKL 182
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+NM + VI+WT+MI G + +A+ +F M A+VKP+++T ++LSAC H+G +
Sbjct: 183 FDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKL 242
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
++G + ++ R+G++ I +ID+ + G +++A ++ RM + ++ W S+++
Sbjct: 243 DVGWAVHHYIR-RHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVIS 300
Query: 253 ASNIYG 258
+ G
Sbjct: 301 GLAVNG 306
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 15/240 (6%)
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
A++ AL+ + A + IH + + G + + ++NALI MYA G++G A ++F+ M
Sbjct: 28 ALVVALTT--NINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGM 85
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
++ +++W T+I G + + +E L +F M A +K + +T + I+ AC H+G E
Sbjct: 86 LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFAD 145
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA---- 252
+K +E + +ID+ GR G L A KL MP + + W S++
Sbjct: 146 SMVKYIKEN-NLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMP-KRDVISWTSMITGYSQ 203
Query: 253 ASNIYGDVELGECALQHLI--KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AS V+L Q ++ K++P ++LS A LG+ + + +R GV+
Sbjct: 204 ASQFSDAVKL----FQEMMAAKVKPDKVTVASVLSAC-AHLGKLDVGWAVHHYIRRHGVQ 258
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 220/345 (63%), Gaps = 3/345 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+MV GYAK G L+ AR LF+LM E++V SW+ LI GYA+ +A+ +F +M+
Sbjct: 79 WNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGP 138
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K +E+ M++ L ACA LGA++ G +H Y+ G + L +LIDMYAK G + +A
Sbjct: 139 KANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFA 198
Query: 132 VFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF +++ V+ W MI GLA HGL +E+LD+++ M+ A +KP+EITF+ +LSAC H
Sbjct: 199 VFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKPDEITFLCLLSACAHG 258
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV+ F + + G+ PK E Y CM+D++ RAG + EA + L +MP E A++ G+
Sbjct: 259 GLVKQASYVFEGL-GKNGMTPKTEHYACMVDVMARAGQVAEAYQFLCQMPLEPTASMLGA 317
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+ +G ++L E + LI+L+P + G Y LSN+YAI RW+E+ +R+ M GV
Sbjct: 318 LLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRRWDEARIMREAMERRGV 377
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
KK PG S++E+S H F+A D SHP +++Y +L I QM+F
Sbjct: 378 KKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVSQMQFG 422
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD + A ++L ELG IH ++ + G + N+LI MY G I A
Sbjct: 5 GIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYA 64
Query: 130 LQVFENMKNKSVITWTTMIAGLALHG---LGR---------------------------- 158
+VF+ K++++W +M+ G A G L R
Sbjct: 65 RKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYG 124
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
+A+ +F +M + K NE+T +++L AC H+G ++ GR + G E + +
Sbjct: 125 DAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDN-GFELNLVLRTSL 183
Query: 219 IDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAASNIYGDVE 261
ID+ + G ++EA + R + +++ IW +++ +G V+
Sbjct: 184 IDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVK 227
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 229/376 (60%), Gaps = 9/376 (2%)
Query: 2 FTLSRLLYKF--------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 53
F +RL++ F WNTM+ GY + G +NNA LF+ M E+++ISWT +I G+ +
Sbjct: 119 FGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKK 178
Query: 54 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
EA+ FR MQ+ VKPD +A++AAL+AC LGA+ G W+H Y+ + ++
Sbjct: 179 GFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVS 238
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N+LID+Y + G + A +VF+ M+ ++V++W ++I G A +G E+L F +M+ K
Sbjct: 239 NSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFK 298
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+ +TF L+AC HVGLVE G RYF MK + I P+IE YGC++DL RAG L++A
Sbjct: 299 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALN 358
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILG 292
+++ MP + N + GSLLAA +G + L E ++HL L + NY ILSN+YA G
Sbjct: 359 VVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADG 418
Query: 293 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
W + K+R+ M+ +G+KK PG S +E+ H F+AGD++H + + ++L I+ ++
Sbjct: 419 IWEGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDLR 478
Query: 353 FAEHLQNEFSGVLESD 368
+ +G L +D
Sbjct: 479 LQGCVFETLAGDLFND 494
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 42/253 (16%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + +SWT+ I ++ + EA F M++ V+P+ I +A LS C + G+ L
Sbjct: 26 TSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEAL 85
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--- 149
G+ +H Y + GL+ T V + A++ MY+K G+ GKA VF+ M++K+ +TW TMI
Sbjct: 86 GDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYM 145
Query: 150 ----------------------------GLALHGLGREALDMFSRMERARVKPNEITFIA 181
G G EAL F M+ + VKP+ + IA
Sbjct: 146 RSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 205
Query: 182 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC H+G + G RY +M + + I +IDL R G ++ A ++ +M
Sbjct: 206 ALAACTHLGALSFGLWVHRY--VMNQDF--KNNIRVSNSLIDLYCRCGCVEFAREVFDKM 261
Query: 239 PFEANAAIWGSLL 251
+ W S++
Sbjct: 262 E-KRTVVSWNSVI 273
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 224/346 (64%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y + D+++AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ + +KP
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+EI +L+ LS+CA LG+++LG+WIH Y +++ V +N ALIDM+AK G + A+ +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
E M+ K W+ MI A HG +++ MF RM V+P+EITF+ +L+AC H G VE
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR+YF+ M S++GI P I+ YG M+DLL RAG L++A + + ++P +W LLAA
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ + +++L E + + +L+ + G+Y ILSN+YA +W +RKVM+D K+P
Sbjct: 409 CSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IEV+ VHEF +GD +L++ L ++ ++K + ++ +
Sbjct: 469 GCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 121/234 (51%), Gaps = 2/234 (0%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LFE M+E +++ + ++ GY++ P E +LF + + + PD + L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
A+E G +H + GL+ V + LI+MY + + A VF+ + V+ + M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I G A EAL +F M+ +KPNEIT +++LS+C +G ++LG ++ + ++
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHS 260
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ +ID+ + G L +A + +M ++ A W +++ A +G E
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMIVAYANHGKAE 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 33/146 (22%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ M+ YA G + +++ +F RM+ ENV
Sbjct: 299 WSAMIVAYANHG-------------------------------KAEKSMLMFERMRSENV 327
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDEI L L+AC+ G VE G ++ + ++G+ + +++D+ +++G + A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 131 QVFENMK-NKSVITWTTMIAGLALHG 155
+ + + + + + W ++A + H
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHN 413
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 213/326 (65%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K ++ AR F+ M +++V++W+T+IAGYAQ +P+E++ LF RM+ + KP+E+ +
Sbjct: 261 YVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTL 320
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLG+ ELG I +++E L L +ALIDMY K G +G+A VF M++
Sbjct: 321 VGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEH 380
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K VITW +M+ GLAL+G ++A+ ++ M V+PNEITF+A+L+AC H GLV+ G +
Sbjct: 381 KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F MK+ + + P++E C++DLL ++G L+EA K + M E NA IW +LL+A +
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
DVEL + A L+ LEP NS Y +LSNIYA G W + +IR +MR V+K+ S+I
Sbjct: 501 DVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
E+ VH+F+ DT HP ++ ++
Sbjct: 561 ELDGEVHKFLVQDTYHPKSAEIFNVV 586
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY+K GD+ AR LF+ M + SW ++IA YA + EA+ LFRRM E +
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGAR 214
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + S CA+ G +E G+W + I + L ++ ++ AL++MY K I +A +
Sbjct: 215 PNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMI-VHTALMEMYVKCRAIDEARRE 273
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ + V+ W+TMIAG A +G E+L++F RM+ KPNE+T + +LSAC +G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG + + ++S+ P G +ID+ + G++ A + RM + W S++
Sbjct: 334 ELGGQIGSHVESQN--LPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMM 390
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G + AR++F M K VI+W +++ G A +AITL++ M E+V+
Sbjct: 356 SALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQ 415
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN---ALIDMYAKSGKIGKA 129
P+EI +A L+AC G V+ G + + E ++ + P ++D+ KSG++ +A
Sbjct: 416 PNEITFVALLTACTHAGLVDQG--MSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREA 473
Query: 130 LQVFENMK-NKSVITWTTMIAGLALHG 155
+ +M+ + + W+T+++ H
Sbjct: 474 YKFICDMEVEPNAVIWSTLLSACRAHA 500
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 7 LLYKFWNTMVAGYAKVGDLNN----------ARALFELMTEKNVISWTTLIAGYAQMDQP 56
L Y+ +AG K L++ AR LF+ + TLI+ +++
Sbjct: 7 LPYRHLPQHLAGLLKTRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSH 66
Query: 57 NEAITLFRRMQV--ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
E + F + +V P + ++ + +CA L A G+ +H + GL + +
Sbjct: 67 QELLDAFSSLHRRGSDVPPGCVPLV--VKSCAILAASRQGKQVHCHAIVRGLLGDIFVQT 124
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVI-------------------------------T 143
AL+D YAK+G + A++VF+ M K I +
Sbjct: 125 ALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSAS 184
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
W +MIA A G +EAL +F RM +PN IT + S C G +E G+
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGK 237
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 219/342 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K G + +A +FE +++ +T+L+ YAQ Q EA+ L+ MQ +K
Sbjct: 352 NSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIK 411
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA L A E G+ +H +I ++G + + N+L++MYAK G I A
Sbjct: 412 PDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCA 471
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W+ MI GLA HG G+EAL +F +M + V PN IT +++L AC H GLV
Sbjct: 472 FSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLV 531
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ YFN MK +GIEP E Y CMIDLLGRAG L+ A +L+ +MPF+ANA +WG+LL
Sbjct: 532 AEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLG 591
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A+ I+ +++LGE A + L+ LEP SG + +L+NIYA +G W++ ++R++M+D VKK
Sbjct: 592 AARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKE 651
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S++EV +V+ F+ GD SH +Y L +++ +K A
Sbjct: 652 PGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKA 693
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 131/241 (54%), Gaps = 4/241 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V YAK G +AR+LF+ + +++V+SW L + Y D EA++LF M + ++
Sbjct: 49 NSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIR 108
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ + ++ C L G IH Y+ + G ++ NAL+DMYAK G + A V
Sbjct: 109 PNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSV 168
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + +++W +IAG LH AL++ M ++ + PN T + L AC + L
Sbjct: 169 FDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALR 228
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELGR+ + +++K G + + +ID+ + + +A + + MP E + W +++
Sbjct: 229 ELGRQLHSSLIKMDMGSDSFLGV--GLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVI 285
Query: 252 A 252
+
Sbjct: 286 S 286
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 5/262 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAKVG L +A ++F+ + + +++SW +IAG + + A+ L R M +
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMC 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +AL ACA + ELG +H+ + + + + L LIDMY+K + A V
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLV 269
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +I W +I+G + + EA +F M + N+ T +L + +
Sbjct: 270 FKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQAN 329
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ R+ + + + G E +ID G+ G++++A ++ P + ++ SL+
Sbjct: 330 YMCRQ-IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVT 387
Query: 253 ASNIYGDVELGECALQHLIKLE 274
A Y GE AL+ ++++
Sbjct: 388 A---YAQDGQGEEALRLYLEMQ 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M + +K +E A + L AC + LG+ +H + G ++ + N+L+ +YAK G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
G A +F+ + ++SV++W + + + EA+ +F M + ++PNE + ++++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C + GR+ + + G + ++D+ + G L++A + + + +
Sbjct: 121 CTGLEDSVQGRKIHGYL-IKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIV 178
Query: 246 IWGSLLAASNIY 257
W +++A ++
Sbjct: 179 SWNAIIAGCVLH 190
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 208/307 (67%), Gaps = 2/307 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + ++ A LF M E++V SW+T+I+GY Q +QPN A+ LF +M +
Sbjct: 399 WNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGI 458
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E+ M++ LSA A G ++ G W H Y+ + L+ A+IDMYAK G I AL+
Sbjct: 459 KPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALE 518
Query: 132 VFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF ++ K +V W +I GLA+HG +L +FS +ER +K N ITFI +L+ACCHV
Sbjct: 519 VFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHV 578
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+R+F MKS + I+P I+ YGCM+DLLGRAG L+EAE+++R MP +A+ IWG+
Sbjct: 579 GLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGT 638
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA +G+V++GE A ++L +LEP + + +LSN+YA G+W ++ +R+ M+ +
Sbjct: 639 LLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRM 698
Query: 310 KKMPGCS 316
+++PG S
Sbjct: 699 QRLPGYS 705
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 144/283 (50%), Gaps = 33/283 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY+K G +++AR +FE + K++++W T+I GY ++++ NEA+ ++R M
Sbjct: 267 WNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGW 326
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-------TIVPLN----------- 113
+P+++ M+ +S C + A+ G+ + + + + G + TI+ L
Sbjct: 327 EPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACL 386
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
NALI Y ++ I +A+++F M + V +W+TMI+G + A
Sbjct: 387 QFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLA 446
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L++F +M + +KPNE+T +++LSA G ++ GR + + I +ID
Sbjct: 447 LELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNN-SITVSDNLSAAIID 505
Query: 221 LLGRAGYLQEAEKLLRRMPFEANA-AIWGSLLAASNIYGDVEL 262
+ + G + A ++ + +A+ + W +++ ++G L
Sbjct: 506 MYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANL 548
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 35/274 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M++GY K G L+ A LF+ M K +S+TT+I G++Q + N+A+ LF++M+ V
Sbjct: 135 YNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGV 194
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-----EQYGLNTIVPLN------------- 113
P+E+ + +SA + G + +H + E++ L + L
Sbjct: 195 VPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARA 254
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
N +++ Y+K+G + A VFE + NK ++TW T+I G EA
Sbjct: 255 LFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEA 314
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMI 219
L M+ M A +PN++ + ++S C + G++ + ++K + I+ +I
Sbjct: 315 LMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQS--TII 372
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
L G + EA L R+ + N A W +L+A
Sbjct: 373 HLYAACGRINEA-CLQFRIGSKENVASWNALIAG 405
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA------------- 121
E+ +++AL C+ + G+ IH + + GL + + N+LI+MY
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 122 ------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
KSG++ A ++F+ M K +++TTMI G + + +A+++
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F +M V PNE+T ++SA H G + R ++ I+ E++ + L
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLV-----IKMLFEEFVLVSTNLL 240
Query: 224 R----AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
R L EA L MP E N W +L + G V+ + +
Sbjct: 241 RMYCVCSSLVEARALFDEMP-EKNIVSWNVMLNGYSKAGFVDSARVVFERI 290
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 214/340 (62%), Gaps = 2/340 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ MV+G+A+VGD+ +A +F M +++V SW LIAG Q + I LFRRM E
Sbjct: 174 FTAMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECN 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + ++ ALSAC +G ++LG WIH Y+ + GL + NAL+DMY K G +GKA +
Sbjct: 234 RPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARK 293
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITFIAILSACCHV 189
VFE K + +W +MI ALHG A+ +F +M V+P+E+TF+ +L+AC H
Sbjct: 294 VFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHG 353
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G YF +M YGIEP+IE YGC+IDLLGRAG EA +++ M E + +WGS
Sbjct: 354 GLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGS 413
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL ++G +L E A + LI+++PHN G +L+N+Y LG+W+E + + ++
Sbjct: 414 LLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKS 473
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 349
K+PGCS+IEV +VH+F + D S+P + LY +L + G
Sbjct: 474 YKVPGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVLESLVG 513
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRM-QVENVKPDEIAML 79
+ +L AR +F+ + N +T +I YA + A++LFR M + + +P+
Sbjct: 52 LSNLTYARLIFDHIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFP 111
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK-SGKIGKALQVFENMKN 138
AL C + A E +H I + G + + AL+D Y+K SG +G A +VF+ M +
Sbjct: 112 HALKTCPESCAAES---LHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSD 168
Query: 139 KSVITWTTMIAGLA-------------------------------LHGLGREALDMFSRM 167
+SV+++T M++G A +G + +++F RM
Sbjct: 169 RSVVSFTAMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRM 228
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+PN +T + LSAC H+G+++LG R+ + + G+ ++D+ G+ G
Sbjct: 229 VFECNRPNGVTVVCALSACGHMGMLQLG-RWIHGYVYKNGLAFDSFVLNALVDMYGKCGS 287
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
L +A K+ P E W S++ ++G +
Sbjct: 288 LGKARKVFEMNP-EKGLTSWNSMINCFALHGQSD 320
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 218/333 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR LFE M E+NVISW+ +I GY + +PNEA+ F+RM +
Sbjct: 141 WNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGI 200
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A + A++ACAQLGA+E G W+H+Y+E+ + V + ALIDMY K G++ A
Sbjct: 201 KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKL 260
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M KSV+TW MI GL HG G +A+ +F++ME R ++++ +A+L++C H GL
Sbjct: 261 IFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGL 320
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F M+ G+EPK+E YG +IDLLGRAG + +A + MP E +WGSLL
Sbjct: 321 VSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLL 380
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A+ + VEL E +++ L L +SG Y +LSNIYA G W++ +IRK+M G+KK
Sbjct: 381 ASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKK 440
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV ++HEFV G +SHP + +Y L
Sbjct: 441 NIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTL 473
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y ++GD + R +F+ ++++SW +++AGY + + A LF M+ +
Sbjct: 49 NALISFYCRIGDCRSGRKVFDHGV-RDLVSWNSMVAGYVGCGEVDLAQDLFDEMR----Q 103
Query: 73 PDEIAMLAALSACAQL-GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + + ++ G V+ + + + L N++ID YA+ G++ +A
Sbjct: 104 RDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCW----NSMIDGYARHGRMDEARV 159
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M ++VI+W+ +I G G EAL+ F RM R +KP+ + + ++AC +G
Sbjct: 160 LFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGA 219
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E GR + ++ + + + Q +ID+ + G L A+ + MP + + W ++
Sbjct: 220 LEQGRWLHSYLEKKKVLFDVVVQTA-LIDMYVKCGRLDLAKLIFESMP-KKSVVTWNVMI 277
Query: 252 AASNIYG 258
+G
Sbjct: 278 VGLGTHG 284
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 10/194 (5%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M+ V PD A L AC +G +H + GL+ + NALI Y + G
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+VF++ + +++W +M+AG G A D+F M R R + T I
Sbjct: 61 CRSGRKVFDH-GVRDLVSWNSMVAGYVGCGEVDLAQDLFDEM-RQRDAFSWATMIDGYGE 118
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
G V+ R F+ M R + + MID R G + EA L MP E N
Sbjct: 119 --MAGGVDRARELFDQMPDR-----DLVCWNSMIDGYARHGRMDEARVLFEEMP-ERNVI 170
Query: 246 IWGSLLAASNIYGD 259
W ++ +G+
Sbjct: 171 SWSIVIDGYVRFGE 184
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 211/341 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G + A L + + E+ V+SW +I+G++ Q EA F +M V PD
Sbjct: 522 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 581
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L CA L VELG+ IH I + L + +++ L+DMY+K G + +FE N
Sbjct: 582 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 641
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +TW M+ G A HGLG EAL +F M+ VKPN TF+A+L AC H+GLVE G Y
Sbjct: 642 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 701
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M S YG++P++E Y C++D++GR+G + +A +L+ MPFEA+A IW +LL+ I+G
Sbjct: 702 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 761
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+ E A +++LEP +S Y +LSNIYA G WNE K+RK+MR G+KK PGCS+I
Sbjct: 762 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 821
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
E+ VH F+ GD +HP +Y+ L + +MK+ ++ +
Sbjct: 822 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 862
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 16/280 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L A +FE M ++ +SW +IA + Q + ++LF M ++
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PDE + L ACA A+ G IHN I + GL++ V + ALIDMY+K G + KA
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAE 532
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++ + + ++V++W +I+G +L EA FS+M V P+ T+ IL C ++
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
VELG++ + I+K + I ++D+ + G +Q+ + + + P + W +
Sbjct: 593 TVELGKQIHAQIIKKELQSDAYISS--TLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNA 649
Query: 250 LLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 284
++ +G LGE AL+ L ++P+++ A+L
Sbjct: 650 MVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVL 686
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYA GD+ A+ LF+ M E++V+SW +LI+GY + I +F +M
Sbjct: 111 WNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGT 170
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D L +C+ L G IH + G + V +AL+DMYAK K+ ++Q
Sbjct: 171 VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQ 230
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F +M K+ ++W+ +IAG + R L++F M++A V ++ TF ++ +C +
Sbjct: 231 FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSA 290
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ LG + + + +K+ +G + I +D+ + L +A+KL +P
Sbjct: 291 LRLGSQLHGHALKTDFGTDVVIGT--ATLDMYMKCNNLSDAQKLFNSLP 337
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K +L++A+ LF + N+ S+ +I GYA+ D+ EA+ +FR +Q + DE+++
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A ACA + G +H + + + + NA++DMY K G + +A VFE M +
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++W +IA +G + L +F M ++ ++P+E T+ ++L AC + G
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 499
Query: 199 FN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
N I+KSR G++ + +ID+ + G +++AEKL R+ E W ++++ ++
Sbjct: 500 HNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQ 556
Query: 258 GDVELGECALQHLIKL--EPHNSGNYAILSN 286
E + ++++ +P N IL
Sbjct: 557 KQSEEAQKTFSKMLEMGVDPDNFTYATILDT 587
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK L+ + F M EKN +SW+ +IAG Q D + LF+ MQ V +
Sbjct: 219 YAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTF 278
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +CA L A+ LG +H + + T V + A +DMY K + A ++F ++ N
Sbjct: 279 ASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVELGRR 197
++ ++ +I G A G EAL MF ++++ + +E++ AC + G +E +
Sbjct: 339 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV 398
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ MKS + I ++D+ G+ G L EA + M +A W +++AA
Sbjct: 399 HGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQN 455
Query: 258 GDVE 261
G+ E
Sbjct: 456 GNEE 459
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ + + +FE ++ ++W ++ GYAQ EA+ +F MQ+ENVK
Sbjct: 617 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 676
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ LA L AC +G VE G + H+ + YGL+ + + ++D+ +SG++ KAL+
Sbjct: 677 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 736
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ E M + W T+++ +HG
Sbjct: 737 LIEGMPFEADAVIWRTLLSICKIHG 761
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 47/242 (19%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
I+ F Q K + + C+ A+ G+ H + V + N LI M
Sbjct: 29 ISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 120 YAKS-------------------------------GKIGKALQVFENMKNKSVITWTTMI 148
Y K G IG A ++F+ M + V++W ++I
Sbjct: 87 YIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLI 146
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC----HVGLVELGRRYFNIMKS 204
+G +G R+ +D+F +M R + TF +L +C H G +++ + +
Sbjct: 147 SGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI-----HGLAV 201
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA----SNIYGDV 260
+ G + + ++D+ + L + + MP E N W +++A ++ G +
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 261 EL 262
EL
Sbjct: 261 EL 262
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 209/314 (66%), Gaps = 2/314 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK G++ AR LF + E++V+SW +I+G+ + A+ LF +MQ
Sbjct: 212 WNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQ 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT--IVPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G +++G +H+ + + L T V L NALIDMYAK G + A
Sbjct: 272 KPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTGFTVILGNALIDMYAKCGSMKSA 331
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
LQVF M++K V TW ++I GLALHG E++D+F +M + +V+P+EITF+A+L AC H
Sbjct: 332 LQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHG 391
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ GR YFN+M+ Y IEP ++ YGCM+D+LGRAG L+EA + + M E N+ IW +
Sbjct: 392 GMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRT 451
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++G++EL E A + L+K SG+Y +LSNIYA G W+ES K+RK+M D GV
Sbjct: 452 LLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSNIYASAGEWSESEKMRKLMDDSGV 511
Query: 310 KKMPGCSYIEVSKR 323
K G + ++ S +
Sbjct: 512 NKQAGRTVVDGSAK 525
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAM 78
G + +A +F+ + ++ + TLI G A P +A++L+ RM V+PD+I
Sbjct: 56 GAIAHAYLVFDQIPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITF 115
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC +GA G +H ++ + G + + NALI M+A G++G A +F+
Sbjct: 116 PFVLRACTAMGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAR 175
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ + W+ MI G A G A +F + VK + +++ +++A G + R
Sbjct: 176 EDAVAWSAMITGCARRGDIVAARKLF---DECPVK-DHVSWNVMITAYAKRGEMAPARVL 231
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAG---YLQEAEKLLRRMPFEANAAIWGSLLAASN 255
FN + R + + MI R G Y E + ++RM + + SLL+A
Sbjct: 232 FNRIPER-----DVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACA 286
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSN----IYAILGRWNESGKIRKVMRDMGV 309
GD+++G L ++ +G IL N +YA G + ++ VMRD V
Sbjct: 287 DSGDIDVGRRLHSSLSEMFL-RTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDV 343
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 153/366 (41%), Gaps = 61/366 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ +A G+L A ALF+ ++ ++W+ +I G A+ A LF V+
Sbjct: 151 NALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAARKLFDECPVK--- 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D ++ W N +I YAK G++ A +
Sbjct: 208 -DHVS------------------W-----------------NVMITAYAKRGEMAPARVL 231
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + V++W MI+G G A+++F +M+R KP+ +T +++LSAC G +
Sbjct: 232 FNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDI 291
Query: 193 ELGRRYFNIMKS---RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
++GRR + + R G + +ID+ + G ++ A ++ M + + + W S
Sbjct: 292 DVGRRLHSSLSEMFLRTGFTVILGN--ALIDMYAKCGSMKSALQVFWVMR-DKDVSTWNS 348
Query: 250 LLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGK-----IRK 302
++ ++G V + ++K + P A+L I G + G+ ++
Sbjct: 349 IIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVL--IACSHGGMVDKGREYFNLMQH 406
Query: 303 VMRDMGVKKMPGC-----SYIEVSKRVHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 355
R K GC + K EF+ P+ +L C+++G+++ AE
Sbjct: 407 HYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAE 466
Query: 356 HLQNEF 361
H +
Sbjct: 467 HANRQL 472
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER----ARVKPNE 176
A G I A VF+ + + + T+I G A R+A+ +++RM R V+P++
Sbjct: 53 AVRGAIAHAYLVFDQIPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDK 112
Query: 177 ITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
ITF +L AC +G G + + +++K+ G E +I + G L A L
Sbjct: 113 ITFPFVLRACTAMGAGGTGAQVHAHVVKA--GCESDAFVRNALIGMHASCGELGVASALF 170
Query: 236 RRMPFEANAAIWGSLLAASNIYGDV 260
E +A W +++ GD+
Sbjct: 171 DGRARE-DAVAWSAMITGCARRGDI 194
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 223/341 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++GY G + AR LF+ M EKN +SW LIAGY ++ EA+ +F MQV
Sbjct: 181 WTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGF 240
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + +++ AL+ACA LGA++ G WIH Y++++ ++ L ALIDMYAK G I A
Sbjct: 241 RLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACS 300
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++ V +T +I+GLA H A+D+F+RM+ V PNE+TF+ +L+AC +G+
Sbjct: 301 VFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGM 360
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F M +RY IEP+I+ YGC++DLLGRAG ++EA++++R MP + ++ G+LL
Sbjct: 361 VDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALL 420
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++GDV+LGE + L++ + G + +LSN+YA +W ++ KIRK M D ++K
Sbjct: 421 DACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRK 480
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PGCS IEV+ V EFV GD S+ + + +L I+ Q+K
Sbjct: 481 LPGCSSIEVNGTVCEFVTGDRSYALEEDIMFLLFGIDKQLK 521
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A LF + K+ W T++ + + ++ A +L++ M N P+ + AC
Sbjct: 65 AERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACID 124
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT-- 145
+ +++G H + ++G + + N LI +YA G + A +F+ + V+TWT
Sbjct: 125 VFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCL 184
Query: 146 -----------------------------TMIAGLALHGLGREALDMFSRMERARVKPNE 176
+IAG G +EAL++F M+ + + N
Sbjct: 185 ISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNR 244
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+ + L+AC +G ++ G R+ + R+ + +ID+ + G ++ A +
Sbjct: 245 ASIVGALTACAFLGALDQG-RWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFD 303
Query: 237 RM 238
M
Sbjct: 304 EM 305
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 220/342 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y+K G + +AR +F+ M ++++SW +IAGYAQ A+ +MQ + V
Sbjct: 727 NALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVV 786
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++ + ++ L+AC+ A+E G+ +H I + + V + ALI MYAK G + +A +V
Sbjct: 787 LNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEV 846
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+N K+V+TW MI A HGL +ALD F+ M++ +KP+ TF +ILSAC H GLV
Sbjct: 847 FDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLV 906
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G R F+ ++S++G+ P IE YGC++ LLGRAG QEAE L+ +MPF +AA+W +LL
Sbjct: 907 MEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLG 966
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+V L E A + +KL N Y +LSN+YA GRW++ KIR+VM G++K
Sbjct: 967 ACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 1026
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S+IEV +HEF+A D SHP+ +Y+ L +++ +M+ A
Sbjct: 1027 PGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERA 1068
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 140/241 (58%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ GDL AR LF M ++++ISW +IAGYA+ + EA+ L+++MQ E VK
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + L LSAC A G+ IH I + G+ + L NAL++MY + G I +A V
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + + +I+W +MIAG A HG A +F M++ ++P++ITF ++L C + +
Sbjct: 544 FEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEAL 603
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELGR+ +++ G++ + +I++ R G LQ+A ++ + N W +++
Sbjct: 604 ELGRQ-IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIG 661
Query: 253 A 253
Sbjct: 662 G 662
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 143/263 (54%), Gaps = 7/263 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G + A+ +FE +++ISW ++IAG+AQ A LF M+ E ++
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I + L C A+ELG IH I + GL V L NALI+MY + G + A +V
Sbjct: 585 PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++++++V++WT MI G A G R+A ++F +M+ KP + TF +IL AC +
Sbjct: 645 FHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACL 704
Query: 193 ELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G++ +I+ S Y ++ + +I ++G + +A K+ +MP + W ++
Sbjct: 705 DEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMI 761
Query: 252 AASNIYGDVELGECALQHLIKLE 274
A Y LG ALQ +++
Sbjct: 762 AG---YAQNGLGGTALQFAYQMQ 781
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 131/247 (53%), Gaps = 4/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L +A +F + +NV+SWT +I G+A + +A LF +MQ + K
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + L AC ++ G+ + +I G + NALI Y+KSG + A +V
Sbjct: 686 PVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKV 745
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M N+ +++W MIAG A +GLG AL +M+ V N+ +F++IL+AC +
Sbjct: 746 FDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSAL 805
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+R + I+K + ++ + +I + + G L+EA+++ E N W +++
Sbjct: 806 EEGKRVHAEIVKRK--MQGDVRVGAALISMYAKCGSLEEAQEVFDNFT-EKNVVTWNAMI 862
Query: 252 AASNIYG 258
A +G
Sbjct: 863 NAYAQHG 869
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+ + GD+ A+ E +++V+ + LIA AQ EA + +M+ + V +
Sbjct: 329 FVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L+ L+AC+ A+ GE IH++I + G ++ V + N+LI MYA+ G + +A ++F M
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ +I+W +IAG A EA+ ++ +M+ VKP +TF+ +LSAC + G+
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA----IWGSLLAA 253
+ +I++S GI+ ++++ R G + EA+ + FE A W S++A
Sbjct: 509 HEDILRS--GIKSNGHLANALMNMYRRCGSIMEAQNV-----FEGTRARDIISWNSMIAG 561
Query: 254 SNIYGDVE 261
+G E
Sbjct: 562 HAQHGSYE 569
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N+++ Y K DL +AR +F + ++V+S+ T++ YAQ E I LF +M E
Sbjct: 219 RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSE 278
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD++ + L A ++ G+ IH GLN+ + + AL M+ + G + A
Sbjct: 279 GIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGA 338
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
Q E ++ V+ + +IA LA HG EA + + +M V N T++++L+AC
Sbjct: 339 KQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTS 398
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+ G + + S G ++ +I + R G L A +L MP + + W +
Sbjct: 399 KALGAGELIHSHI-SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNA 456
Query: 250 LLAA 253
++A
Sbjct: 457 IIAG 460
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K +++A +F M ++VISW +LI+ YAQ +A LF MQ
Sbjct: 121 NLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI 180
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P +I ++ L+AC +E G+ IH+ I + G + N+L++MY K + A QV
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + V+++ TM+ A E + +F +M + P+++T+I +L A ++
Sbjct: 241 FSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSML 300
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+R + + G+ I + + R G + A++ L + + ++ +L+A
Sbjct: 301 DEGKRIHKLAVNE-GLNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIA 358
Query: 253 ASNIYGDVE 261
A +G E
Sbjct: 359 ALAQHGHYE 367
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
Q + + A + + C + ++ + IH + + G+ + L+N LI+MY K +
Sbjct: 74 QPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 133
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A QVF M + VI+W ++I+ A G ++A +F M+ A P++IT+I+IL+AC
Sbjct: 134 SDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC 193
Query: 187 CHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
C +E G++ + I+++ Y +P+++ ++++ G+ L A ++
Sbjct: 194 CSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVF 241
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
W+TMV GY+K GD+ AR +F+ M KNV++WT +IAGYA+ EA L +M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVAS 309
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++ D A ++ L+ACA+ G + LG H+ I++ LN+ + NAL+DMYAK G + KA
Sbjct: 310 GLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKA 369
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF +M K +++W TM+ GL +HG G+EA+++FSRM + + P+++TFIA+L +C H
Sbjct: 370 FDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHA 429
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL++ G YF M+ Y + PK+E YGC++DLLGR G L+EA K+++ MP E N IWG+
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++ +V++ + L +L+KL+P + GNY +LSNIYA W IR M+ MGV
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+K G S +E+ +HEF D SHP D++YQ+L
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N A +F + E NV +LI +A QP +A +F MQ + D L AC
Sbjct: 68 NLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KALQVFENMKNKSVIT 143
+ L + + + +HN+IE+ GL++ + + NALID Y++ G +G A+++FE M + ++
Sbjct: 128 SGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +M+ GL G R+A +F M + + I++ +L + F M
Sbjct: 188 WNSMLGGLVKAGELRDARKLFDEMPQRDL----ISWNTMLDGYARCREMSRAFELFEKMP 243
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAA 253
R + + M+ +AG ++ A + +MPF A N W ++A
Sbjct: 244 ERNTV-----SWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAG 289
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 43/249 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ G K G+L +AR LF+ M ++++ISW T++ GYA+ + + A LF +M N
Sbjct: 188 WNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNT 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W + ++ Y+K+G + A
Sbjct: 248 V----------------------SW-----------------STMVMGYSKAGDMEMARV 268
Query: 132 VFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F+ M K+V+TWT +IAG A GL +EA + +M + ++ + I+IL+AC
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL+ LG R +I+K + + ++D+ + G L++A + MP + + W +
Sbjct: 329 GLLSLGMRAHSIIK-KSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMP-KKDLVSWNT 386
Query: 250 LLAASNIYG 258
+L ++G
Sbjct: 387 MLHGLGVHG 395
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L CA L V+ +H I + L+ + + LI + + AL+VF ++
Sbjct: 23 LQDLPKCANLNQVKQ---LHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQE 79
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V ++I AL+ +A +FS M+R + + T+ +L AC + + + +
Sbjct: 80 PNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMM 139
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYL--QEAEKLLRRMPFEANAAIWGSLLAA 253
N ++ + G+ I +ID R G L ++A KL +M E + W S+L
Sbjct: 140 HNHIE-KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGG 194
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%)
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M L ACA + A+E G+ +H I + G V ++N L+DMY K G+I A +VF +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
V +W MI+GLA HG G+EA+ +F +M + VKPN+ITF+ +LS C H GLV+ GR
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
YF+ M +GI PK E Y CM+DL GRAG L EA + +MP E NA++WGSLL A ++
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
G++EL E A++ LI+L P N G Y +LSNIYA GRW+++GK+RK+M+D VKK PGCS+
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
IEV +VH F+ GD+SHP + +Y+ L + QMK A ++ N
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPN 282
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K G + +A+ +F + E +V SW +I+G AQ EA+ LF +M VK
Sbjct: 37 NGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVK 96
Query: 73 PDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P++I + LS C+ G V+ G + + +G++ + ++D++ ++G + +AL
Sbjct: 97 PNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALN 156
Query: 132 VFENM---KNKSVITWTTMIAGLALHG 155
M N SV W +++ +HG
Sbjct: 157 FINQMPVEPNASV--WGSLLGACRVHG 181
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 212/347 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +FE + N+I++T++I +Q D +AI LF M + ++
Sbjct: 445 NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLE 504
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + T V NAL+ YAK G I A
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLA 564
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +K V++W+ MI GLA HG G+ ALD+F RM R+ PN IT ++L AC H GLV
Sbjct: 565 FSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLV 624
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + YF+ MK +GI+ E Y CMIDLLGRAG L +A +L+ MPFEANAA+WG+LLA
Sbjct: 625 DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG+ A + L LEP SG + +L+N YA G W+E K+RK+M+D VKK
Sbjct: 685 ASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKE 744
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S++E+ RVH F+ GD SHP +Y L ++ M A ++ N
Sbjct: 745 PAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPN 791
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
S LL+ F N +++ Y+K +AR +F+ + +SW++L+ Y+ P EA+ FR
Sbjct: 33 SGLLHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFR 92
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ V+ +E A+ L G LG +H GL+ + + NAL+ MY G
Sbjct: 93 AMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVANALVAMYGGFG 149
Query: 125 KIGKALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
+ +A +VF E ++++ ++W M++ + +A+++F M + V+PNE F ++
Sbjct: 150 FVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVV 209
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+AC +E GR+ + M R G + + ++D+ + G + A + ++P + +
Sbjct: 210 NACTGSRDLEAGRK-VHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTD 267
Query: 244 AAIWGSLLAASNIYG 258
W + ++ ++G
Sbjct: 268 VVSWNAFISGCVLHG 282
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G ++ AR +F E ++N +SW +++ + + D+ ++A+ LF M V
Sbjct: 139 NALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGV 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E ++AC +E G +H + + G + V NAL+DMY+K G I A
Sbjct: 199 RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAAL 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
VF + V++W I+G LHG + AL++ +M+ + + PN T +IL
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+V YAK G L++AR +FE + K+++ W LI+G + E+++LF RM+ E
Sbjct: 345 ALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDI 404
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ + A L + A L A+ +H E+ G + + N LID Y K + A +VF
Sbjct: 405 NRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVF 464
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
E + ++I +T+MI L+ G +A+ +F M R ++P+ ++L+AC + E
Sbjct: 465 EEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 524
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ + +++K ++ + + ++ + G +++A+ +P + W +++
Sbjct: 525 QGKQVHAHLIKRKFMTD--VFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMIG 581
Query: 253 ASNIYG 258
+G
Sbjct: 582 GLAQHG 587
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K+GD++ A +F + + +V+SW I+G A+ L +M+ +
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 73 PDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ + + L ACA GA IH ++ + ++ + AL+DMYAK G + A
Sbjct: 301 PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDAR 360
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+VFE + K ++ W +I+G + G E+L +F RM + N T A+L +
Sbjct: 361 KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 233/343 (67%), Gaps = 6/343 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ YAKVG++++A +F+ M ++++ SW LI+G+AQ +P EA++LF+RM+++ K
Sbjct: 144 TTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFK 203
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+EI++L ALSACAQLG + GE IH YI E++ +N V N +IDMYAK G + KA
Sbjct: 204 PNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVC--NVVIDMYAKCGFVDKAY 261
Query: 131 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VFE+M K ++TW TMI A+HG G +AL++F +M+++ V P++++++A+L AC H
Sbjct: 262 LVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHG 321
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G R FN M++ G++P ++ YG ++DLLGRAG L EA ++ MP + +W +
Sbjct: 322 GLVEEGFRLFNSMEN-CGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQT 380
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL AS + +VE+ E + L+++ ++ G++ +LSN+YA RW + G++R+ M++ V
Sbjct: 381 LLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDV 440
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
KK+PG SYIE + +H+F D SH + +Y L +I ++K
Sbjct: 441 KKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVK 483
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 81
+G+L+ A F + + W +I G+ Q P A ++ M ++ K D +
Sbjct: 52 LGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFV 111
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L ACA++ A IH +I + G L L+D+YAK G+I A +VF+ M + +
Sbjct: 112 LKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDI 171
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+W +I+G A EAL +F RME KPNEI+ + LSAC +G + G +
Sbjct: 172 ASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGY 231
Query: 202 MK-SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+K R+ + ++ +ID+ + G++ +A + M + W +++ A ++G+
Sbjct: 232 IKVERFDMNAQV--CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGE 288
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 223/342 (65%), Gaps = 2/342 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE--N 70
T++ YAK G ++ A ++F M KN +SW+ +IA +A+ + P +A+ LF+ M +E +
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHD 281
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ + M+ L ACA L A+E G+ IH YI + GL++I+P+ NALI MY + G+I
Sbjct: 282 SVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQ 341
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+NMKN+ V++W ++I+ +HG G++A+ +F M P+ I+FI +L AC H G
Sbjct: 342 RVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAG 401
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ F M S+Y I P +E Y CM+DLLGRA L EA KL+ M FE +WGSL
Sbjct: 402 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSL 461
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L + I+ +VEL E A L +LEP N+GNY +L++IYA W+E+ + K++ G++
Sbjct: 462 LGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQ 521
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K+PGCS+IEV ++V+ FV+ D +P + ++ +L K++ +MK
Sbjct: 522 KLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMK 563
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + +CAQ ++ G +H + G + L LI+MY + G I +A +V
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC----H 188
F+ + +++ W + LA+ G G+E LD++ +M + + T+ +L AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
V ++ G+ + +I+ R+G E I ++D+ + G + A + MP + N W
Sbjct: 196 VSPLQKGKEIHAHIL--RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSW 252
Query: 248 GSLLAASNIYGDVELGECALQ--HLIKLEPHNS 278
+++A + E+ AL+ L+ LE H+S
Sbjct: 253 SAMIAC---FAKNEMPMKALELFQLMMLEAHDS 282
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 209/330 (63%), Gaps = 1/330 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N ++ YAK G L +A LF K+ ++W +IA Y Q EAI+ F +M++EN
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + ++ L A A L A G H I Q G + + N+LIDMYAK G++ + +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEK 689
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC H GL
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGL 749
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +WG+LL
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ ++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+G+KK
Sbjct: 810 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 869
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS++E+ +VH F GD SHP + ++
Sbjct: 870 TPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G+ A+ LF + +++++W+ +IA Q P EA++LF+ MQ + +KP+ + +
Sbjct: 374 YAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTL 433
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L ACA L ++LG+ IH + + +++ + AL+ MYAK G AL F M +
Sbjct: 434 MSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS 493
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++TW ++I G A G A+DMF ++ + + P+ T + ++ AC + ++ G
Sbjct: 494 RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI 553
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G E +ID+ + G L AE L + F + W ++AA
Sbjct: 554 HGLI-VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K GD++ AR +F+ M +++ +SW T++AGYA E + LF +M++ NV+
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++++ ++A A A+ +E G+ IH Q +++ + + L+ MYAK G+ KA Q+
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + ++ W+ +IA L G EAL +F M+ ++KPN +T ++IL AC + L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG+ + + ++ + ++ + + G+ A RM + W SL+
Sbjct: 447 KLGKS-IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLIN 504
Query: 253 ASNIYGD 259
GD
Sbjct: 505 GYAQIGD 511
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V+ YAK G A F M+ +++++W +LI GYAQ+ P AI +F ++++ +
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M+ + ACA L ++ G IH I + G + + NALIDMYAK G + A +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 133 FENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F K +TW +IA +G +EA+ F +M PN +TF+++L A ++
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G F+ + G +ID+ + G L +EKL M + + W ++L
Sbjct: 649 FREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAML 706
Query: 252 AASNIYG 258
+ ++G
Sbjct: 707 SGYAVHG 713
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K+GDL AR +F+ M +++V++W +IAG +Q + P EA+ FR MQ+ V+P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++L +L +EL IH Y+ + ++ V +N LID+Y+K G + A +VF+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFD 287
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++ ++W TM+AG A +G E L++F +M+ V+ N+++ ++ A +E
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 195 GR 196
G+
Sbjct: 348 GK 349
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR++F+ + I W ++I Y + Q NEA+ ++ M + ++PD+ L AC
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
++ G W H I++ GL V + L+DMY+K G + +A +VF+ M + V+ W M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAGL+ EA+D F M+ V+P+ ++ + + C + +EL R + R
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR-- 259
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +IDL + G + A ++ +M + + WG+++A
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
LI++Y+ K A VF++ N S I W +MI EAL+M+ M ++P+
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 176 EITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+ TF +L AC G + L +F+ R G+E + ++D+ + G L+ A ++
Sbjct: 129 KYTFTFVLKAC--TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 235 LRRMPFEANAAIWGSLLA 252
+MP + + W +++A
Sbjct: 187 FDKMP-KRDVVAWNAMIA 203
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 211/341 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G + A L + + E+ V+SW +I+G++ Q EA F +M V PD
Sbjct: 459 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 518
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L CA L VELG+ IH I + L + +++ L+DMY+K G + +FE N
Sbjct: 519 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 578
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +TW M+ G A HGLG EAL +F M+ VKPN TF+A+L AC H+GLVE G Y
Sbjct: 579 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 638
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M S YG++P++E Y C++D++GR+G + +A +L+ MPFEA+A IW +LL+ I+G
Sbjct: 639 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHG 698
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+ E A +++LEP +S Y +LSNIYA G WNE K+RK+MR G+KK PGCS+I
Sbjct: 699 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 758
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
E+ VH F+ GD +HP +Y+ L + +MK+ ++ +
Sbjct: 759 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 799
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 16/280 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L A +FE M ++ +SW +IA + Q + ++LF M ++
Sbjct: 352 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 411
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PDE + L ACA A+ G IHN I + GL++ V + ALIDMY+K G + KA
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAE 469
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++ + + ++V++W +I+G +L EA FS+M V P+ T+ IL C ++
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
VELG++ + I+K + I ++D+ + G +Q+ + + + P + W +
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISST--LVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNA 586
Query: 250 LLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 284
++ +G LGE AL+ L ++P+++ A+L
Sbjct: 587 MVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVL 623
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 139/272 (51%), Gaps = 7/272 (2%)
Query: 19 YAKVGDLNN-ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
Y K +L++ + LF + N+ S+ +I GYA+ D+ EA+ +FR +Q + DE++
Sbjct: 256 YMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVS 315
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ A ACA + G +H + + + + NA++DMY K G + +A VFE M
Sbjct: 316 LSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV 375
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
++ ++W +IA +G + L +F M ++ ++P+E T+ ++L AC + G
Sbjct: 376 SRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGME 435
Query: 198 YFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 256
N I+KSR G++ + +ID+ + G +++AEKL R+ E W ++++ ++
Sbjct: 436 IHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSL 492
Query: 257 YGDVELGECALQHLIKL--EPHNSGNYAILSN 286
E + ++++ +P N IL
Sbjct: 493 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 524
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ + + +FE ++ ++W ++ GYAQ EA+ +F MQ+ENVK
Sbjct: 554 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 613
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ LA L AC +G VE G + H+ + YGL+ + + ++D+ +SG++ KAL+
Sbjct: 614 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 673
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ E M + W T+++ +HG
Sbjct: 674 LIEGMPFEADAVIWRTLLSXCKIHG 698
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 119/319 (37%), Gaps = 73/319 (22%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR-------- 64
N ++ Y K DL A +F+ M +++ +SW ++ GYA A LF
Sbjct: 81 NCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCG 140
Query: 65 -------RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
RM D L +C+ L G IH + G + V +AL+
Sbjct: 141 VVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALL 200
Query: 118 DMYAK----SGKIGKALQVFENMK------------------------------------ 137
DMYAK + + L++F+ M+
Sbjct: 201 DMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCN 260
Query: 138 --------------NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
N ++ ++ +I G A G EAL MF ++++ + +E++
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 184 SACCHV-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
AC + G +E + + MKS + I ++D+ G+ G L EA + M
Sbjct: 321 RACAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEM-VSR 377
Query: 243 NAAIWGSLLAASNIYGDVE 261
+A W +++AA G+ E
Sbjct: 378 DAVSWNAIIAAHEQNGNEE 396
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 17/142 (11%)
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
I+ F Q K + + C+ A+ G+ H + V + N LI M
Sbjct: 29 ISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGL--------------ALHGLGREALDMFS 165
Y K +G A +VF+ M + ++W M+ G A+ G G +++F
Sbjct: 87 YIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFD 146
Query: 166 -RMERARVKPNEITFIAILSAC 186
RM R + TF +L +C
Sbjct: 147 FRMGRMGTVFDRTTFAVVLKSC 168
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 220/357 (61%), Gaps = 4/357 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+ +AR +F++M+ ++V++WT +I GY Q +EA+ LFR M
Sbjct: 366 FTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGP 425
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS CA L +E G+ IH + ++N+++ MYA+SG + A +
Sbjct: 426 EPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARR 485
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ + K +TWT+MI LA HGLG +A+ +F M R VKP+ ITF+ +LSAC HVG
Sbjct: 486 VFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVG 545
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ G+RYF ++ ++GI P++ Y CM+DLL RAG EA++ +++MP E +A WGSL
Sbjct: 546 FVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSL 605
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ + +L E A + L+ ++P NSG Y+ LSN+Y+ GRWN++ KI K +D VK
Sbjct: 606 LSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVK 665
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGV 364
K G S+ + RVH F A D HP D +Y+ K+ +K F LQ+ V
Sbjct: 666 KETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDV 722
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 145/260 (55%), Gaps = 37/260 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ YAK G L +ARA+F M E++ +SWT ++ G ++ + EAI +F M + +
Sbjct: 99 WNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGL 158
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-------- 123
P + + LS+CA A +G +H+++ + GL++ VP+ N++++MY K
Sbjct: 159 SPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARA 218
Query: 124 -----------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
G++ AL +FENM ++++++W +IAG +GL +A
Sbjct: 219 VFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKA 278
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY-GC 217
L FSRM + + P+E T ++LSAC ++G+V +G++ + I++SR P I Q
Sbjct: 279 LWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM---PYIGQVTNA 335
Query: 218 MIDLLGRAGYLQEAEKLLRR 237
+I + ++G ++ A ++++
Sbjct: 336 LISMYAKSGSVENARGVMQQ 355
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 204/309 (66%), Gaps = 1/309 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G++ +AR LF+ K+V+SW +IAGY +A+ LF M V
Sbjct: 208 WNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGV 267
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKSGKIGKAL 130
PDE+ +L+ LSACA LG +E G+ +H + + + + L NALIDMYAK G I ++L
Sbjct: 268 FPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESL 327
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF ++ +K VI+W ++I G+ALHG G+E+L +F M+R ++ PNEITF+ +L AC H G
Sbjct: 328 DVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAG 387
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ G +YF++M S Y IEP I GCM+D+LGRAG L+EA K + M E NA IW +L
Sbjct: 388 EIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTL 447
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA ++GDVEL + A + L + +SG+Y ++SN+YA G W+ + K+RK+M D GV
Sbjct: 448 LAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVT 507
Query: 311 KMPGCSYIE 319
K+ G S++E
Sbjct: 508 KIRGSSFVE 516
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
++ +L N ++ YAK G++ + +F +T+K+VISW ++I G A E+++L
Sbjct: 301 SMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSL 360
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYA 121
F+ MQ + P+EI + L AC+ G ++ G ++ +Y + + ++DM
Sbjct: 361 FKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLG 420
Query: 122 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A + ++MK + I W T++A +HG
Sbjct: 421 RAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHG 455
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 30/273 (10%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
L L+ ++V A N A LF + + + + +I G +Q P AI+L+
Sbjct: 37 LGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLY 96
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
M VK D L AC +L V G +H + + G + + N L+ +AK
Sbjct: 97 TEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKC 156
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAI 182
G + A +F++ V+ W+++IAG A G + A +F+ M ER V N +
Sbjct: 157 GDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWN-----VM 211
Query: 183 LSACCHVGLVELGRRYF-----------NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
++ G +E R F N M + Y + +Q + + + RAG +
Sbjct: 212 ITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDE 271
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
LL SLL+A GD+E G+
Sbjct: 272 VTLL-------------SLLSACADLGDLENGK 291
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 210/321 (65%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L +A+ +F M ++ +SW+T+I G A NE+ FR +Q +
Sbjct: 198 WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 257
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+++ LSAC+Q G+ E G+ +H ++E+ G + IV +NNALIDMY++ G + A
Sbjct: 258 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 317
Query: 132 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ K +++WT+MIAGLA+HG G EA+ +F+ M V P+ I+FI++L AC H G
Sbjct: 318 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 377
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E G YF+ MK Y IEP+IE YGCM+DL GR+G LQ+A + +MP A +W +L
Sbjct: 378 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 437
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + +G++EL E Q L +L+P+NSG+ +LSN YA G+W + IRK M +K
Sbjct: 438 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 497
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K S +EV K +++F AG+
Sbjct: 498 KTTAWSLVEVGKTMYKFTAGE 518
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 112/300 (37%), Gaps = 64/300 (21%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALS 83
L AR L E + + TL+ GY++ D+P+ ++ +F M + V PD + +
Sbjct: 47 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 106
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI- 142
A ++ G +H ++GL + + + LI MY G + A +VF+ M +++
Sbjct: 107 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 166
Query: 143 ------------------------------TWTTMIAGLALHGLGREALDMFSRM----- 167
+W M+AG G A +FS M
Sbjct: 167 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 226
Query: 168 --------------------------ERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+RA + PNE++ +LSAC G E G+
Sbjct: 227 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 286
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ + G + +ID+ R G + A + M + W S++A ++G E
Sbjct: 287 VE-KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 345
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 224/354 (63%), Gaps = 7/354 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A YAK D+ A+ +F+ M ++ +I+W +LI+GY Q P E+I LF M +PD
Sbjct: 230 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 289
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ LS+C+QLGA++ G W+H+Y + G + V L +LI+MY + G + KA +VF+
Sbjct: 290 SATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFD 349
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+MK ++V+TWT MI+G +HG GR+A+++F+ M +PN ITF+A+LSAC H GL++
Sbjct: 350 SMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDD 409
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR-MPFEANAAIWGSLLAA 253
GRR F+ MK YG+ P +E CM+D+ GRAG L +A + +++ +P E A+W S+L A
Sbjct: 410 GRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA 469
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
++ + +LG +H++ +EP N G+Y +LSNIYA+ GR + +R +M +KK
Sbjct: 470 CRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV 529
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL------CKINGQMKFAEHLQNEF 361
G S IE++++ + F GD SHP + +Y+ L C +G + E L ++
Sbjct: 530 GYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 583
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + AR LF + + + +L+ ++ + + +RRM + +
Sbjct: 137 GSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVI 196
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA L A+ LG+ IH+++ G + + + ALI +YAK+ + A +VF+ M +++I
Sbjct: 197 KACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTII 256
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W ++I+G +GL +E++ +F M + +P+ T +++LS+C +G ++ G + +
Sbjct: 257 AWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFG-CWLHDY 315
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G + + +I++ R G + +A ++ M E N W ++++ ++G
Sbjct: 316 ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMISGYGMHG 370
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y + G+++ AR +F+ M E+NV++WT +I+GY +A+ LF M+ +
Sbjct: 329 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 388
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ I +A LSACA G ++ G + + + E YGL V N ++DM+ ++G + A Q
Sbjct: 389 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 448
Query: 132 VFENM--KNKSVITWTTMIAGLALH 154
+ K WT+M+ +H
Sbjct: 449 FIKKFIPKEPGPAVWTSMLGACRMH 473
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+ +H +I GL+ L LI + +G I A ++F + N + +++ +
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIE 213
G + + + RM + + TF +++ AC + + LG+ + ++M YG + ++
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+I L +A ++ A+K+ MP + W SL++ + G
Sbjct: 228 --AALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLISGYDQNG 269
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G +A +F+ + KN ISWT LI G+ + D EA+ FR MQ+ V
Sbjct: 164 WNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGV 223
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + ++A ++ACA LG + LG W+H + V ++N+LIDMY++ G I A Q
Sbjct: 224 APDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQ 283
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++++W ++I G A++GL EAL F+ M+ KP+ +++ L AC H GL
Sbjct: 284 VFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGL 343
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G R F MK I P+IE YGC++DL RAG L+EA +L+ MP + N I GSLL
Sbjct: 344 IGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLL 403
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA G++ L E + +LI+L+ NY +LSNIYA +G+W+ + K+R+ M++ G++K
Sbjct: 404 AACRTQGNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQK 463
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 363
PG S IE+ +H+FV+GD SH + D +Y L ++ +++ ++ +FSG
Sbjct: 464 KPGFSSIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGYIP-DFSG 514
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 37/254 (14%)
Query: 40 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL---GAVELGEW 96
++SWTT IA Y + +A + F +M+ ++P+ I + LSACA ++ G
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 97 IHNYIEQYGLN-TIVPLNNALIDMYAKSGKI----------------------------G 127
IH ++ + GL+ V + ALIDMYAK G++ G
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 128 K---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
K ALQVF+ + K+ I+WT +I G EAL+ F M+ + V P+ +T IA+++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++G + LG ++ ++ ++ +ID+ R G + A ++ RMP +
Sbjct: 236 ACANLGTLGLGLWVHRLVMTQ-DFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMP-QRTL 293
Query: 245 AIWGSLLAASNIYG 258
W S++ + G
Sbjct: 294 VSWNSIIVGFAVNG 307
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 47/235 (20%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y++ G ++ AR +F+ M ++ ++SW ++I G+A +EA++ F MQ E
Sbjct: 263 KVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEE 322
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL---NNALIDMYAKSGKI 126
KPD ++ AL AC+ G + G I ++++ + I+P L+D+Y+++G++
Sbjct: 323 GFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKR--VRRILPRIEHYGCLVDLYSRAGRL 380
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+AL V +NM +KPNE+ ++L+AC
Sbjct: 381 EEALNVLKNMP----------------------------------MKPNEVILGSLLAAC 406
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKI---EQYGCMIDLLGRAGYLQEAEKLLRRM 238
G + L N Y IE Y + ++ G A K+ RRM
Sbjct: 407 RTQGNIGLAENVMN-----YLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRM 456
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 45/155 (29%)
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH--------- 188
N +++WTT IA G +A F +M A ++PN ITFI +LSAC H
Sbjct: 53 NDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISF 112
Query: 189 ------------------------------VGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
G VE R F+ M R + + M
Sbjct: 113 GTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVR-----NLVSWNTM 167
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
ID R G ++A ++ +P + NA W +L+
Sbjct: 168 IDGYMRNGKFEDALQVFDGLPVK-NAISWTALIGG 201
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 210/321 (65%), Gaps = 1/321 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGY K G+L +A+ +F M ++ +SW+T+I G A NE+ FR +Q +
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+++ LSAC+Q G+ E G+ +H ++E+ G + IV +NNALIDMY++ G + A
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 132 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE M+ K +++WT+MIAGLA+HG G EA+ +F+ M V P+ I+FI++L AC H G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E G YF+ MK Y IEP+IE YGCM+DL GR+G LQ+A + +MP A +W +L
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A + +G++EL E Q L +L+P+NSG+ +LSN YA G+W + IRK M +K
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K S +EV K +++F AG+
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGE 526
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 112/300 (37%), Gaps = 64/300 (21%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALS 83
L AR L E + + TL+ GY++ D+P+ ++ +F M + V PD + +
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI- 142
A ++ G +H ++GL + + + LI MY G + A +VF+ M +++
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 143 ------------------------------TWTTMIAGLALHGLGREALDMFSRM----- 167
+W M+AG G A +FS M
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 168 --------------------------ERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
+RA + PNE++ +LSAC G E G+
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ + G + +ID+ R G + A + M + W S++A ++G E
Sbjct: 295 VE-KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 216/332 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++ A ALF+ M K+ +S++ L++GY Q + EA +F++MQ NV+
Sbjct: 379 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G H + GL + + NALIDMYAK G+I + QV
Sbjct: 439 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 498
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++ +++W TMIAG +HGLG+EA +F M P+ +TFI +LSAC H GLV
Sbjct: 499 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 558
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F++M+ YG+ P++E Y CM+DLL R G+L EA + ++ MP A+ +W +LL
Sbjct: 559 IEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +Y +++LG+ + + +L P +GN+ +LSNIY+ GR++E+ ++R + + G KK
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 678
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H FV GD SHP +Y+ L
Sbjct: 679 PGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 131/243 (53%), Gaps = 7/243 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDE 75
YAK G L AR +F+ M +N ++W+ LI G+ + +A LF+ M + + P
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
IA +AL ACA L + +GE +H + + G++ + N+L+ MYAK+G I +A+ +F+
Sbjct: 343 IA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M K ++++ +++G +G EA +F +M+ V+P+ T ++++ AC H+ ++ G
Sbjct: 401 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
R + R G+ + +ID+ + G + + ++ MP + W +++A
Sbjct: 461 RCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYG 518
Query: 256 IYG 258
I+G
Sbjct: 519 IHG 521
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 16/243 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA---ITLFRRMQVENVKPDEIAML 79
G L+ A LF+ + +V ++ LI Y+ P A + L+RRM V P+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSS-SSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
AL AC+ L G IH + GL + ++ AL+DMY K + A +F M +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 140 SVITWTTMIAGLALHGLGREALD--MFSRMERARVKPNEITFIAILSACCHVGLVELGR- 196
++ W M+AG A HG+ A+ + +M+ R++PN T +A+L G + G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 197 ----RYFNIMKSRYGIEPKIEQ----YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
R + S + K+ ++D+ + G L A ++ MP N W
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 249 SLL 251
+L+
Sbjct: 309 ALI 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 18/235 (7%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT--LFRRMQVENVKPDEI 76
Y K L +A +F M +++++W ++AGYA + A+ L +MQ+ ++P+
Sbjct: 170 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 229
Query: 77 AMLAALSACAQLGAVELGEWIHNYI----------EQYGLNTIVPLNNALIDMYAKSGKI 126
++A L AQ GA+ G +H Y + L V L AL+DMYAK G +
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSL 289
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITFIAIL 183
A +VF+ M ++ +TW+ +I G L +A +F M + P I + L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SAL 347
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
AC + + +G + ++ ++ G+ + ++ + +AG + +A L M
Sbjct: 348 RACASLDHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 224/354 (63%), Gaps = 7/354 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++A YAK D+ A+ +F+ M ++ +I+W +LI+GY Q P E+I LF M +PD
Sbjct: 166 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ LS+C+QLGA++ G W+H+Y + G + V L +LI+MY + G + KA +VF+
Sbjct: 226 SATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFD 285
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+MK ++V+TWT MI+G +HG GR+A+++F+ M +PN ITF+A+LSAC H GL++
Sbjct: 286 SMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDD 345
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR-MPFEANAAIWGSLLAA 253
GRR F+ MK YG+ P +E CM+D+ GRAG L +A + +++ +P E A+W S+L A
Sbjct: 346 GRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA 405
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
++ + +LG +H++ +EP N G+Y +LSNIYA+ GR + +R +M +KK
Sbjct: 406 CRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV 465
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL------CKINGQMKFAEHLQNEF 361
G S IE++++ + F GD SHP + +Y+ L C +G + E L ++
Sbjct: 466 GYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 519
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + AR LF + + + +L+ ++ + + +RRM + +
Sbjct: 73 GSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVI 132
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
ACA L A+ LG+ IH+++ G + + + ALI +YAK+ + A +VF+ M +++I
Sbjct: 133 KACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTII 192
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W ++I+G +GL +E++ +F M + +P+ T +++LS+C +G ++ G + +
Sbjct: 193 AWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFG-CWLHDY 251
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G + + +I++ R G + +A ++ M E N W ++++ ++G
Sbjct: 252 ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMISGYGMHG 306
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y + G+++ AR +F+ M E+NV++WT +I+GY +A+ LF M+ +
Sbjct: 265 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ I +A LSACA G ++ G + + + E YGL V N ++DM+ ++G + A Q
Sbjct: 325 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 384
Query: 132 VFENM--KNKSVITWTTMIAGLALH 154
+ K WT+M+ +H
Sbjct: 385 FIKKFIPKEPGPAVWTSMLGACRMH 409
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+ +H +I GL+ L LI + +G I A ++F + N + +++ +
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIE 213
G + + + RM + + TF +++ AC + + LG+ + ++M YG + ++
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+I L +A ++ A+K+ MP + W SL++ + G
Sbjct: 164 --AALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLISGYDQNG 205
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 230/344 (66%), Gaps = 6/344 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MVAG + GD+ AR LFE M ++++SW +++G A +P EA+ LFRRM E
Sbjct: 109 WTSMVAGLCRAGDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGF 168
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP--LNNALIDMYAKSGKIGKA 129
P+ +L+AL+ACA GA+E G+WIH ++E+ L L AL+DMYAK G + A
Sbjct: 169 APNRGTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELA 228
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCH 188
L VF +++++ TW MI GLA++G +ALDMF +ME R V P+E+TF+ +L AC H
Sbjct: 229 LDVFTKLRSRNTCTWNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSH 288
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V++GR +F++++ +YGI +E Y CM+DLL R+G+LQEA K++ MP + +A +W
Sbjct: 289 GGFVDVGREHFHMIEKKYGIRLILEHYACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWR 348
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL ++ DV++ E A+ ++E SG++ +LSN+YA +GRW+ +R+ MR G
Sbjct: 349 ALLGGCRLHKDVKMAETAIS---EMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKG 405
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++K+PGCS IE++ +HEFV+GD SHP ++ ++ L +I+ +M+
Sbjct: 406 IEKIPGCSSIEINDSIHEFVSGDKSHPSYNDIHAKLAEISARMQ 449
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + + GL ++NALI YA SG + A +VF+ M ++ +++ +MI A+ G
Sbjct: 31 LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSGD 90
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
A +F R+ P +T+ ++++ C G V RR F M R + +
Sbjct: 91 VVSARRLFERVP----SPTPVTWTSMVAGLCRAGDVAAARRLFEEMPVR-----DLVSWN 141
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
M+ L EA L RRM E A G++L+
Sbjct: 142 AMMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLS 177
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 216/347 (62%), Gaps = 1/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E +
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE+ M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL V
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N+ K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+
Sbjct: 1210 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 1269
Query: 313 -PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
PG S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 1270 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 1316
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 44/265 (16%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K T++ Y+ G + AR +F+ M E++ I+WTT+++ Y ++ + A +L +M +
Sbjct: 905 KIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 964
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
N A S C LI+ Y G + +A
Sbjct: 965 N---------EATSNC------------------------------LINGYMGLGNLEQA 985
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F M K +I+WTTMI G + + REA+ +F +M + P+E+T ++SAC H+
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G++E+G+ ++ + G + ++D+ + G L+ A + +P + N W S
Sbjct: 1046 GVLEIGKE-VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNS 1103
Query: 250 LLAASNIYGDVELGECALQHLIKLE 274
++ +G + AL+ K+E
Sbjct: 1104 IIEGLAAHG---FAQEALKMFAKME 1125
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N + L+ A + M E NV + L G+ P ++ L+ RM +
Sbjct: 806 RLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 865
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+V P + + A + A GE + +I ++G V + LID Y+ +G+I +A
Sbjct: 866 SVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 923
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITFIAILSACC 187
+VF+ M + I WTTM++ R LDM S A + NE T +++
Sbjct: 924 RKVFDEMPERDDIAWTTMVSAY------RRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 188 HVGLVELGRRYFNIM 202
+G +E FN M
Sbjct: 978 GLGNLEQAESLFNQM 992
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
LN L N I ++ A+ M+ +V + + G +L+++
Sbjct: 800 SLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 859
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRY-FNIMKSRYGIEPKIEQYGCMIDLLG 223
RM R V P+ T+ +++ A G +I K +G KI+ +ID
Sbjct: 860 VRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQT--TLIDFYS 915
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G ++EA K+ MP E + W ++++A
Sbjct: 916 ATGRIREARKVFDEMP-ERDDIAWTTMVSA 944
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 210/333 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G+ + G++ A LF+ M ++ ISWT LI G + +A+ F +MQ V
Sbjct: 164 WNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV 223
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D ++++A L+ACA LGA+ LG W+H ++ + ++N+LIDMY++ G I A Q
Sbjct: 224 AADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQ 283
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M +++++W ++I G A++G E+L+ F M++ KP+ +++ L+AC H GL
Sbjct: 284 VFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGL 343
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F+ MKS + I P+IE YGC++DL GRAG L++A ++ MP + N + GSLL
Sbjct: 344 VNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLL 403
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +GDV L E ++HL KL+P Y +LSNIYA +G+W+ + +R+ M+ GV+K
Sbjct: 404 AACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQK 463
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S +E+ +VHEFVAGD H D D +Y +L
Sbjct: 464 KPGYSSVEIDGKVHEFVAGDNYHADADNIYSML 496
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 44/275 (16%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 86
N + F + ++ WT+ +A Y + Q +EA F RM++ V+P+ I + LSACA
Sbjct: 44 NISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACA 103
Query: 87 QLGAVEL--GEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGK--------------- 128
+ +H Y +YGL+T V + ALIDMY+K ++G
Sbjct: 104 DFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVS 163
Query: 129 ----------------ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
A+Q+F+ M + I+WT +I GL HG +AL+ F +M+R+ V
Sbjct: 164 WNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV 223
Query: 173 KPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
+ ++ IA+L+AC +G + LG R+ +M + KI +ID+ R G ++
Sbjct: 224 AADYVSIIAVLAACADLGALTLGLWVHRF--VMPQEFKDNIKISN--SLIDMYSRCGCIE 279
Query: 230 EAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
A ++ +M + W S++ A N + D L
Sbjct: 280 FARQVFVKMA-KRTLVSWNSIIVGFAVNGFADESL 313
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 214/339 (63%), Gaps = 28/339 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV+GY G L+ AR LFE ++V+ WT +I GY Q ++ ++A+ LFR MQ++ V
Sbjct: 236 WTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRV 295
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD ++A L+ + ALI+MYAK G I K+L+
Sbjct: 296 SPDRFTLVALLTDAV-------------------------VGTALIEMYAKCGFIEKSLE 330
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F +K K +WT++I GLA++G +AL++F+ M + VKP++ITFI +LSAC H GL
Sbjct: 331 IFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGL 390
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WG 248
VE GR++F M + Y IEPK+E YGC+IDLLGRAG L EAE+L+ + P N I +G
Sbjct: 391 VEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYG 450
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A +G+VE+GE + L+ +E +S + +L+NIYA RW + K+R+ M+D+G
Sbjct: 451 ALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLG 510
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
VKK+PGCS +EV+ VHEF+ GD SHP+ +Y +L I
Sbjct: 511 VKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 549
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 81
+G+L+ A +F + + + +I + + +A+ LFR+++ E + PD
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
A LG V GE ++ ++ + GL + N+L+DMYA+ G++ QVFE M + V
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
++W +I+G +A+D+F ++ I + +++S + G ++ R F
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELF 256
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 223/347 (64%), Gaps = 2/347 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKP 73
M+ YAK G++ ARALF+ M E++++SW +I GY+Q P++A+ LF+++ + KP
Sbjct: 196 MITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKP 255
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
DEI ++AALSAC+Q+GA+E G WIH ++ + V + ALIDMY+K G + +A+ VF
Sbjct: 256 DEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVF 315
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 192
+ K ++ W MI G A+HG ++AL +F M+ ++P +ITFI L AC H GLV
Sbjct: 316 NDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLV 375
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + F M YGI+PKIE YGC++ LLGRAG L+ A ++++ M EA++ +W S+L
Sbjct: 376 NEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLG 435
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++G+ LG+ ++LI NSG Y +LSNIYA++G + K+R +M++ G+ K
Sbjct: 436 SCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKE 495
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IE+ +VHEF AGD H +Y +L K++ ++K ++ N
Sbjct: 496 PGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPN 542
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA G + ++ ALF + ++ +T I + ++A L+ ++ + P+E
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L +C+ + G+ IH ++ ++GL + L+D+YAK G + A +VF+ M
Sbjct: 131 FSSILKSCS----TKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 138 NKS-------------------------------VITWTTMIAGLALHGLGREALDMFSR 166
+S +++W MI G + HG +AL +F +
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 167 -MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+ + KP+EIT +A LSAC +G +E G R+ ++ + I ++ +ID+ +
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETG-RWIHVFVNSSRIRLNVKVCTALIDMYSKC 305
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G L+EA + P + W +++ ++G
Sbjct: 306 GSLEEAVLVFNDTP-RKDIVAWNAMITGYAMHG 337
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
RL K ++ Y+K G L A +F K++++W +I GYA +A+ LF
Sbjct: 289 RLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDE 348
Query: 66 MQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKS 123
MQ + ++P +I + L ACA G V G I + ++YG+ + L+ + ++
Sbjct: 349 MQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRA 408
Query: 124 GKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGRE 159
G++ +A ++ +NM ++ + W++++ LHG LG+E
Sbjct: 409 GQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKE 448
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
LN L YA GKI +L +F + + +T I +++GL +A ++ ++ ++
Sbjct: 64 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQ 123
Query: 172 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
+ PNE TF +IL +C + G+ + +++K G++P + ++D+ + G +
Sbjct: 124 INPNEFTFSSILKSCS----TKSGKLIHTHVLKFGLGLDPYVAT--GLVDIYAKGGDVVS 177
Query: 231 AEKLLRRMP 239
A+K+ RMP
Sbjct: 178 AQKVFDRMP 186
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 213/334 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K ++ AR F+ M ++V++W+T+IAGY+Q +P+E++ LF RM+ N KP+E+ +
Sbjct: 350 YVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTL 409
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLG+ ELGE I NYIE L L +ALIDMY K G + +A VF M+
Sbjct: 410 VGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQ 469
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V+TW +MI GLAL+G +A+ ++ +M ++PNE+TF+A+L+AC H GLV+ G +
Sbjct: 470 KVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAF 529
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F MK + + P++E C++DLL ++G L EA K + M E NA IW +LL+A +
Sbjct: 530 FEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHA 589
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
DVEL + A L+ LEP+NS Y +LSNIYA G W + +IR +MR ++K+ S+I
Sbjct: 590 DVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWI 649
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E+ VH F+ DT HP +Y ++ + Q++
Sbjct: 650 ELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLE 683
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 4/227 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY+K GD+ AR LF+ M + SW ++IA YA + EA+TLF +M E
Sbjct: 244 NCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGAS 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + S CA+ G ++ G +I + L ++ ++ AL++MY K I +A
Sbjct: 304 PNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVI-VHTALMEMYVKCRAIDEARHE 362
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V+ W+TMIAG + +G E+L++F RM+ KPNE+T + +LSAC +G
Sbjct: 363 FDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSD 422
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRM 238
ELG + N ++S+ P G +ID+ + G++ A + RM
Sbjct: 423 ELGEQIGNYIESQ--TLPLTSYLGSALIDMYTKCGHVARARSVFNRM 467
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G + AR++F M +K V++W ++I G A +AI L+R+M + ++
Sbjct: 445 SALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQ 504
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ +A L+AC G V+ G + ++ ++ V ++D+ KSG++ +A +
Sbjct: 505 PNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYK 564
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+M+ + + W+T+++ H
Sbjct: 565 FICDMEVEPNAVIWSTLLSACRAHA 589
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 42/260 (16%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+++ ++G +++ E I + + + L +CAQ
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL----------------- 130
A G H + G+ V + AL+D YAK+G + AL
Sbjct: 187 SAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCL 246
Query: 131 --------------QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
++F++M ++ +W +MIA A G REAL +F +M R PN
Sbjct: 247 ITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ----YGCMIDLLGRAGYLQEAE 232
IT + S C G ++ GRR +R I + Q + ++++ + + EA
Sbjct: 307 ITITTVFSICAKTGDLDTGRR------ARAWIREEDLQNVIVHTALMEMYVKCRAIDEAR 360
Query: 233 KLLRRMPFEANAAIWGSLLA 252
RMP + W +++A
Sbjct: 361 HEFDRMP-RRDVVAWSTMIA 379
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 207/331 (62%), Gaps = 15/331 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN + AG+ K G +++A F+ M ++V SW+T+I+GYAQ + P A+ LF +M +
Sbjct: 386 WNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI 445
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E+ M++ SA A LG ++ G+ H Y+ + L ALIDMYAK G I ALQ
Sbjct: 446 KPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505
Query: 132 VFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
F ++++ SV W +I GLA HG L++FS M+R +KPN ITFI +LSACCH
Sbjct: 506 FFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHA 565
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+R F MKS Y +EP I+ YGCMID+LGRAG L+EAE+++R MP EA+ IWG+
Sbjct: 566 GLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGT 625
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA +G+V +GE A ++L +L P + G +LSNIYA G+W E +R VM+ +
Sbjct: 626 LLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTM 685
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
+ PG S FVAG D DR+
Sbjct: 686 DREPGYS---------GFVAGS----DLDRM 703
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 33/283 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAK G ++ AR LF+ + +K+VISW T+I GY Q + EA+ ++R M
Sbjct: 254 WNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGH 313
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA---------- 121
P+E+ ++ +SAC + A+ G +H + + G + + +I YA
Sbjct: 314 GPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACL 373
Query: 122 ---------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
K+G + AL+ F+ M + V +W+TMI+G A + A
Sbjct: 374 QFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMA 433
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L++F +M +KPNE+T +++ SA +G ++ G+ M+S I +ID
Sbjct: 434 LELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSE-SIPFNDNLRAALID 492
Query: 221 LLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVEL 262
+ + G + A + ++ E ++ + W +++ +G +
Sbjct: 493 MYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASM 535
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 33/206 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N MV+GY + G ++NAR LF++M K +S+TT+I G+ Q EA+ +F+ M+ V
Sbjct: 123 NIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVV 182
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLN---------------- 113
P+++ ++ +SAC+ LG V +H + + GL IV N
Sbjct: 183 PNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGL-VIVSTNLMHAYCLCSGVREARR 241
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
N +++ YAK+G + +A ++F+ + +K VI+W TMI G G REA
Sbjct: 242 LFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREA 301
Query: 161 LDMFSRMERARVKPNEITFIAILSAC 186
L+++ M + PNE+ + ++SAC
Sbjct: 302 LEIYRAMLQTGHGPNEVMIVNLVSAC 327
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 55 QPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
P I +F + +N E+A+++AL +C+ L + G IH+ I + GL+ +
Sbjct: 32 NPQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQ 91
Query: 114 NALIDMYAK-------------------------------SGKIGKALQVFENMKNKSVI 142
N+LI+MYAK +G+I A ++F+ M NK +
Sbjct: 92 NSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCV 151
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
++TTMI G +G REAL++F M V PN++T + ++SAC H+G V R ++
Sbjct: 152 SYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLV 211
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
+ + I M +G ++EA +L MP E N W +L N Y L
Sbjct: 212 VKMFVVGLVIVSTNLMHAYCLCSG-VREARRLFDEMP-ERNLVTWNVML---NGYAKTGL 266
Query: 263 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+ A + + + ++ + + Y GR E+ +I + M G
Sbjct: 267 VDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTG 312
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 206/332 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y K G +N A+ LF+ M K +ISW +++GYAQ + L+R M + V
Sbjct: 191 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 250
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++ LS+CA LGA +G + I+ G + LNNALI+MYA+ G + KA V
Sbjct: 251 PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +++++WT +I G +HG G A+ +F M R+ ++P+ F+ +LSAC H GL
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 370
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF +MK Y +EP E Y CM+DLLGRAG L+EA+ L+ MP + + A+WG+LL
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VEL E A + +I+LEP N G Y +LSNIY+ +IR +M++ +KK
Sbjct: 431 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 490
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCSY+E+ RVH F+ GD +H D +Y++L
Sbjct: 491 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 522
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 15 MVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y K ++NAR +FE + K + + L++GY + +EA+ LFR+M E V
Sbjct: 90 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +L + AC +ELG +H +YG ++ V + N I MY K G + A ++
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K +I+W M++G A +GL L+++ M+ V P+ +T + +LS+C ++G
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 193 ELGRRY-FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+G F I S + P + +I++ R G L +A+ + MP E W +++
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAII 326
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
++G E+ + +I+ +EP + +LS
Sbjct: 327 GGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 362
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W T + A+ Q +A++L+ +M +P+ AL +CA L LG H I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREA 160
+ G + LI MY K + A +VFE K + + +++G + EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F +M V N +T + ++ AC +ELG + +YG + + C I
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSVVNCFIT 195
Query: 221 LLGRAGYLQEAEKLLRRMPFEA----NAAIWG 248
+ + G + A+KL MP + NA + G
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 227
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 217/343 (63%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ V
Sbjct: 132 WNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGV 191
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A++AAL+AC LGA+ G W+H Y+ V ++N+LID+Y + G + A +
Sbjct: 192 KPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFARE 251
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ KP+ +TF L+AC HVGL
Sbjct: 252 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 311
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYF MK + I P+IE YGC++DL RAG L+EA K+++ MP + N + GSLL
Sbjct: 312 VEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLL 371
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G + L E ++HL + NY ILSN+YA G+W + ++R+ M+ +G+K
Sbjct: 372 AACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLK 431
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PG S IE+ H F+AGD++H + + ++L ++ ++
Sbjct: 432 KQPGFSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQL 474
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + ++SWT+ I + + EA F M++ V+P+ I +A LS C G+ L
Sbjct: 21 TSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEAL 80
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--- 149
G+ +H Y + G + T V + A++ MY+K ++ KA VF+ M++K+ +TW TMI
Sbjct: 81 GDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYM 140
Query: 150 ----------------------------GLALHGLGREALDMFSRMERARVKPNEITFIA 181
G G EAL F M+ + VKP+ + IA
Sbjct: 141 RNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 200
Query: 182 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC ++G + G RY +M + K+ +IDL R G ++ A ++ +M
Sbjct: 201 ALNACTNLGALSFGLWVHRY--VMSQDFKNNVKVSN--SLIDLYCRCGCVEFAREVFDKM 256
Query: 239 PFEANAAIWGSLL 251
+ W S++
Sbjct: 257 E-KRTVVSWNSVI 268
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y + G + AR +F+ M ++ V+SW ++I G+A +E++ FR+MQ E
Sbjct: 231 KVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEE 290
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
KPD + AL+AC+ +G VE G + + ++ + L+D+Y+++G++ +
Sbjct: 291 GFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEE 350
Query: 129 ALQVFENMKNK-SVITWTTMIAGLALHG 155
AL+V ++M K + + +++A HG
Sbjct: 351 ALKVVQSMPMKPNEVVIGSLLAACRTHG 378
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 34/155 (21%)
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 186
+Q ++++++WT+ I L +G EA FS M A V+PN ITFIA+LS C
Sbjct: 14 IQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDF 73
Query: 187 ---------------CHVG-----------LVELGRRYFNIMKSR----YGIEPKIEQYG 216
C +G ++ + ++ + K+R Y + +
Sbjct: 74 SSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWN 133
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
MID R G + A K+ +MP E + W +++
Sbjct: 134 TMIDGYMRNGQVDNAVKMFDKMP-ERDLISWTAMI 167
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 204/315 (64%), Gaps = 1/315 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
TMV GYAK G + A ++F M K+V+SW+ +IAGYA+ +P EA+ LF MQ VK
Sbjct: 240 TTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVK 299
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDEI ML+ +SACA +GA+E IH+++E + + I+P+ NALIDM++K G + AL V
Sbjct: 300 PDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLALDV 359
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+V+TWT++I A+HG GR AL +F M+ ++PN +TF+ +L ACCH GLV
Sbjct: 360 FNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLV 419
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR F IM +Y IEP E YGCM+DLLGRA L +A L++ M N IWGSLLA
Sbjct: 420 EEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLA 479
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++GD+ELG A + +++L+P++ G +LSNIYA G WN+ K +D KK
Sbjct: 480 ACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDV-KEGLSKKDYEKKKE 538
Query: 313 PGCSYIEVSKRVHEF 327
++E+S + F
Sbjct: 539 LAARFLEISADLSNF 553
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 35/279 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YA G + +AR +F+ M ++++++W ++ Y Q EA+ LF M+ V
Sbjct: 108 TALVRAYAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVV 167
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
PD++ + LS CA + G+ IH+Y+ ++ AL++MYA
Sbjct: 168 PDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKL 227
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
K+GK+ A +F M K V++W+ MIAG A EAL
Sbjct: 228 YNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEAL 287
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG-CMID 220
++F M+R+ VKP+EIT ++++SAC +VG +E R + +++ KI G +ID
Sbjct: 288 NLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMC--KILPIGNALID 345
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ + G L A + MP + N W S++ AS ++GD
Sbjct: 346 MFSKCGSLTLALDVFNAMP-QKNVVTWTSIITASAMHGD 383
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
+ AL+ YA G++ A +VF+ M ++ ++ W M+ EAL +F M+R+R
Sbjct: 106 VGTALVRAYAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSR 165
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
V P+++ +LS C H + G+ + M S I+ ++ ++++ ++
Sbjct: 166 VVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVS--CALMNMYASCADMEM 223
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 271
AEKL R+ + +L+ + +YG + G+ + H I
Sbjct: 224 AEKLYNRVSEKE------IVLSTTMVYGYAKNGKVEIAHSI 258
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 235/368 (63%), Gaps = 13/368 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W ++ G + + N R +F+ M E+N ++WT +IAGY E+ L R M +
Sbjct: 187 WTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLE 246
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNY---IEQYGLNTIVPLNNALIDMYAKSGKIG 127
++ + + + + L+AC+Q G + +G W+H Y ++ LN +V A++DMYAK G+I
Sbjct: 247 MELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMV--GTAMVDMYAKCGRIH 304
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A + F+ M ++V++W M++GLA+HGLGR ALD+F +M + KP+++TF ++LSAC
Sbjct: 305 IAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFK-EAKPDDVTFTSVLSACS 363
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ G YF ++S YGI PK+E Y CM+DLLGRAG L+EAE L+R MP N +
Sbjct: 364 HSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVL 423
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLL + +I+G ++LGE LQ L++L+P N+ + +LSN+YA+ G+ N + +R+V++
Sbjct: 424 GSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKR 483
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN----EFSG 363
G+KK+PG S I V +VH+F AGD SHP +Y +L ++ +++ A + N F+G
Sbjct: 484 GIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAG 543
Query: 364 V--LESDV 369
LE D+
Sbjct: 544 CDSLEDDL 551
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 42/311 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++ YA G AR +F+ + + K+ + WTTL+ + + + +EA+ +F M+
Sbjct: 54 NALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCG 113
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKPDE+ ++ CA+LG V +G H + + GL + NA++DMYAKSG +G+A
Sbjct: 114 VKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEAR 173
Query: 131 QVFENMKNKSVITWTT-------------------------------MIAGLALHGLGRE 159
+VF MK +SV++WT MIAG GL +E
Sbjct: 174 RVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQE 233
Query: 160 ALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
+ + M ++ N +T +IL+AC G + +GR E I M
Sbjct: 234 SFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAM 293
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL----QHLIKLE 274
+D+ + G + A K ++MP + N W ++L+ ++G LG AL Q + +
Sbjct: 294 VDMYAKCGRIHIAFKFFKKMP-QRNVVSWNAMLSGLAMHG---LGRAALDIFPQMFKEAK 349
Query: 275 PHNSGNYAILS 285
P + ++LS
Sbjct: 350 PDDVTFTSVLS 360
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVP--LNNALIDMYAKSGKIGKALQVFENM--K 137
L +CA+ ++++GE +H I G+ L+NAL+ YA G +A +VF+ +
Sbjct: 20 LRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHS 79
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+K + WTT++ H + EAL +F M R VKP+E+T + + C +G V +G +
Sbjct: 80 HKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQ 139
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
M + G+ + ++D+ ++G + EA ++ M
Sbjct: 140 GHGCM-VKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEM 179
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 202/299 (67%), Gaps = 1/299 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV YAK GDL +A LF+ M +NV+SW+ +IA Y+Q++QP EA+ LFR M V
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P + +++ LSACAQLG ++LG WI+ NYI + V L NALIDM+AK G +G+A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M ++V++W TMI A+HG EA+ +F +++ + P++ITF+ +L++C H G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GRRYF M+ Y IEP++E Y CMIDLLG+ G L+EA ++ R MP EA+ A WG+L
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L A ++G+VE+G C L++L+P +SG Y ++S IYA +W++ +R MRD G
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGT 612
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 148/283 (52%), Gaps = 37/283 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
N +V YA L++A +F+ M E++V+SWTTL+ GYA+ +EA LF RM V +
Sbjct: 182 NALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGM 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------ 119
+P+ + ++AA+SA Q+G + G +H Y+ + G+ V L+NAL+DM
Sbjct: 242 RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYARE 301
Query: 120 -------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
YAK G + A Q+F++M ++V++W+ MIA + EA
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN--IMKSRYGIEPKIEQYGCM 218
+ +F M A V P + T +++LSAC +G ++LGR + I+ ++ G+ + +
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGL--TVNLGNAL 419
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
ID+ + G + EA KL M E N W +++ A ++G E
Sbjct: 420 IDMFAKCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSE 461
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 45 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL------GAVELGEWIH 98
T++ G+ + P A+ LFRR+ + + D + A+ A A G GE IH
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165
Query: 99 NYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
+ G + V + NAL+ YA + A +VF+ M + V++WTT++ G A GL
Sbjct: 166 CAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLA 225
Query: 158 REALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY----GIEPKI 212
EA +F RM ++PN +T +A +SA +GL+ F IM +Y G+ +
Sbjct: 226 DEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLA-----FGIMLHKYVTEGGVARSV 280
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
++D+ G+ G ++ A ++ M + + W S++ A GD+E E
Sbjct: 281 NLDNALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAE 331
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 197/308 (63%), Gaps = 1/308 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ KVGD+ LF M +++V+SW ++IAG Q + EA+ LFR M
Sbjct: 176 WNMMIRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGF 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKAL 130
+PD+ ++ L CA+LGAV++GEWIH+Y E L + + N+L+D Y K G + A
Sbjct: 236 EPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAW 295
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF M K+V++W MI+GL +G G D+F M V+PN+ TF+ +LS C H G
Sbjct: 296 RVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAG 355
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR F M + +EPK+E +GCM+DLL R G ++EA L+R MP NA +WGSL
Sbjct: 356 LVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSL 415
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A GDV+ ECA++ LI+LEP NSGNY +LSN+YA G+W+E K+R +M++ ++
Sbjct: 416 LSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIR 475
Query: 311 KMPGCSYI 318
K PG S +
Sbjct: 476 KNPGQSMV 483
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 34/291 (11%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A +F N++ + ++I GY+ ++ LF +M+ + PDE L +C+
Sbjct: 60 ANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSG 119
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT-- 145
+ +G+ +H + G + +ID+Y G++ A +VF+ M ++ VI W
Sbjct: 120 ICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMM 179
Query: 146 -----------------------------TMIAGLALHGLGREALDMFSRMERARVKPNE 176
+MIAGL G EAL++F M +P++
Sbjct: 180 IRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDD 239
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
T + IL C +G V++G + +S + I ++D + G L+ A ++
Sbjct: 240 ATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFN 299
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
MP + N W ++++ G ELG + +I + P+++ +LS
Sbjct: 300 EMP-QKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLS 349
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH +I ++ L+ + + I + K+G A VF +N +++ + +MI G +L G
Sbjct: 28 IHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGP 87
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
+L +FS+M+ + P+E TF +L +C G+ + I E++
Sbjct: 88 SENSLLLFSQMKNRGIWPDEFTFAPLLKSCS--GICD---NRIGKGVHGVVIVVGFERFS 142
Query: 217 C----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
+IDL G +++A+K+ M + + +W ++ GD+E+G
Sbjct: 143 SIRIGIIDLYTSCGRMEDAKKVFDEM-LDRDVIVWNMMIRGFCKVGDIEMG 192
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 223/341 (65%), Gaps = 2/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
T++ YAK GDL++A+ +F+ + ++V +W LIAG AQ + +EA+ LF RM+ E K
Sbjct: 139 TTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEK 198
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+EI++L AL+AC+QLGA+ GE +H + + L+ V + NA+IDMYAK G K +V
Sbjct: 199 INEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRV 258
Query: 133 FENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M KSV+TW TMI A+HG G AL++F M + +V+ + +T++A+L AC H GL
Sbjct: 259 FSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGL 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R F+ M R G+ ++ YG ++DLLGRAG L EA +++ MP + +W SLL
Sbjct: 319 VEEGVRLFDEMVGR-GVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLL 377
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A YG+VE+ E A + L+++ ++ G++ +LSN+YA RW + G++R+ M+ V+K
Sbjct: 378 GACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRK 437
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+PG SYIEV +H+FV GD SHPD+ +Y L +I ++K
Sbjct: 438 VPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIK 478
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
+ L+ G A+ P A+T + + PD + +L A A+ A+ IH+++
Sbjct: 72 FNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALALSETSQIHSHLL 127
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ G + + L LID YAK G + A +VF+ + + V W +IAGLA EAL
Sbjct: 128 RRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALA 187
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+F+RM K NEI+ + L+AC +G + G ++ + ++ ++ +ID+
Sbjct: 188 LFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVR-KMDLDINVQVCNAVIDMY 246
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ G+ + ++ M + W +++ A ++GD
Sbjct: 247 AKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGD 283
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 215/340 (63%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ + GDL +A+ LF M +++++SW T+IAG+ Q + A F+ MQ +K
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I L+ACA A+ G +H I + + V + LI MY K G I A QV
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K+V +WT+MIAG A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL+
Sbjct: 673 FHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +F MK + IEP++E YGCM+DL GRAG L EA + + +M E ++ +WG+LL
Sbjct: 733 EEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +VEL E A Q ++L+P+++G + ILSNIYA G W E K+RKVM D GV K
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV +VH F + D +HP + ++ L +++ +M+
Sbjct: 852 PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 156/274 (56%), Gaps = 4/274 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YAK G+ +A+ +F+ M EK+V SW L+ GY Q EA L +M ++VK
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ ++ L+ACA V+ G ++N I + G +T + + ALI+M+ K G IG A +V
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+N+ + ++TWT+MI GLA HG ++A ++F RME V+P+++ F+++L AC H +
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G++ MK G + +I ++ + + G +++A ++ + N W +++A
Sbjct: 329 EQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR-NVVSWTAMIA 386
Query: 253 ASNIYGDVELGECALQHLIK--LEPHNSGNYAIL 284
+G ++ +I+ +EP+ +IL
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 167/283 (59%), Gaps = 10/283 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+ K GD+ +A +F+ + +++++WT++I G A+ + +A LF+RM+ E V+PD++A
Sbjct: 256 HIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L AC A+E G+ +H +++ G +T + + A++ MY K G + AL+VF+ +K
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++V++WT MIAG A HG EA F++M + ++PN +TF++IL AC ++ G++
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 199 FN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ I+++ YG + ++ ++ + + G L++A ++ ++ + N W +++ A +
Sbjct: 436 QDHIIEAGYGSDDRVRT--ALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQH 492
Query: 258 GDVELGECALQHLIK--LEPHNSGNYAIL----SNIYAILGRW 294
+ Q L+K ++P++S +IL S+ LG+W
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKW 535
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 137/244 (56%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ YAK G L +A +FE ++++NV++W +I Y Q +Q + A+ F+ + E +KP+
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPN 513
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L+ C ++ELG+W+H I + GL + + ++NAL+ M+ G + A +F
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN 573
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+M + +++W T+IAG HG + A D F M+ + +KP++ITF +L+AC +
Sbjct: 574 DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE 633
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GRR ++ + + + +I + + G +++A ++ ++P + N W S++A
Sbjct: 634 GRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGY 691
Query: 255 NIYG 258
+G
Sbjct: 692 AQHG 695
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
Q NEA+ + R+ +++ A L C + + GE I+N+I++ G+ + + N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
LI+MYAK G A Q+F++M+ K V +W ++ G HGL EA + +M + VKP
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
++ TF+++L+AC V+ GR +N++ + G + + +I++ + G + +A K+
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLI-LKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 235 LRRMPFEANAAIWGSLLAASNIYG 258
+P + W S++ +G
Sbjct: 269 FDNLPTR-DLVTWTSMITGLARHG 291
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 210/334 (62%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G++ AR++F+ M ++ ++W ++ GYA P EA+ LF MQ+E KPD +
Sbjct: 87 YVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTV 146
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ ALSAC +LGA++LG + + L ALIDMYAK G +A VF+ M
Sbjct: 147 VGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLE 206
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +I W MI GL + G + A + +M+++ VK N+ TFI +L +C H GLV GR+Y
Sbjct: 207 RDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQY 266
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M Y I P+IE YGCM+DL RAG L+EA +L+ MP ANA +WG+LL I+
Sbjct: 267 FHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHR 326
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ +L E AL+ LI+LEP NSGNY +LSNIY+ GRW ++ K+R M+ G++K+P S++
Sbjct: 327 NADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWV 386
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
E+ +VH+F GD SHP D++Y L ++ +MK
Sbjct: 387 ELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMK 420
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
M + +SWT LIA Y EAI + RR ++PD + L+ACA++ +E G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 95 EWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
E + Q G+ V + A +D+Y K G++ KA VF+ MKN+ + W M+ G A
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+G REALD+F M+ KP+ T + LSAC +G ++LGR+ ++ + +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G EA + ++M E + +W +++ + G
Sbjct: 181 GTA-LIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMILGLGMTG 223
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 226/340 (66%), Gaps = 2/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ + A+ +F + KNV+SW LIAG+A+ + + LF +M + +
Sbjct: 245 SSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFE 304
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + L ACA G++E G+W+H ++ + G I + N LIDMYAKSG I A +V
Sbjct: 305 PTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W ++I+G A HGLG EAL +F +M +A+V+PNEITF+++L+AC H GL+
Sbjct: 364 FRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLL 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+ YF +MK ++ IE ++ + ++DLLGRAG L EA K + MP + AA+WG+LL
Sbjct: 424 DEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLG 482
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +++LG A + + +L+PH+SG + +LSNIYA GR +++ K+RK+M++ GVKK
Sbjct: 483 ACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKE 542
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++E+ VH FVA D SHP + + ++ KI+G++K
Sbjct: 543 PACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 582
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 145/257 (56%), Gaps = 8/257 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G L A+ LF+ M K+++SWT LI+GY+Q Q +EA+ LF +M +
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + L A + G +H + +YG + V + ++L+DMYA+ + +A +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ K+V++W +IAG A G G + +F +M R +P T+ ++L AC G +
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSL 322
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G+ + +++KS G +P +ID+ ++G +++A+K+ RR+ + + W S++
Sbjct: 323 EQGKWVHAHVIKS--GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSII 379
Query: 252 AASNIYGDVELGECALQ 268
+ +G LG ALQ
Sbjct: 380 SGYAQHG---LGAEALQ 393
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+++P+ L+ C L ++ G IH +I+ + L N +++MYAK G + +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F+ M K +++WT +I+G + G EAL +F +M +PNE T ++L A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASG-T 218
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + R + +YG + + ++D+ R +++EA+ + + + N W +
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNA 277
Query: 250 LLAASNIYGDVE 261
L+A G+ E
Sbjct: 278 LIAGHARKGEGE 289
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 210/333 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G+ + G++ A LF+ M ++ ISWT LI G + +A+ F +MQ V
Sbjct: 164 WNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV 223
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D ++++A L+ACA LGA+ LG W+H ++ + ++N+LIDMY++ G I A Q
Sbjct: 224 AADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQ 283
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M +++++W ++I G A++G E+L+ F M++ KP+ +++ L+AC H GL
Sbjct: 284 VFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGL 343
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F+ MKS + I P+IE YGC++DL GRAG L++A ++ MP + N + GSLL
Sbjct: 344 VNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLL 403
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +GDV L E ++HL KL+P Y +LSNIYA +G+W+ + +R+ M+ GV+K
Sbjct: 404 AACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQK 463
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S +E+ +VHEFVAGD H D D +Y +L
Sbjct: 464 KPGYSSVEIDGKVHEFVAGDNYHADADNIYSML 496
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 44/275 (16%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 86
N + F + ++ WT+ +A Y + Q +EA F RM++ V+P+ I + LSACA
Sbjct: 44 NISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACA 103
Query: 87 QLGAVEL--GEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGK--------------- 128
+ +H Y +YGL+T V + ALIDMY+K ++G
Sbjct: 104 DFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVS 163
Query: 129 ----------------ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
A+Q+F+ M + I+WT +I GL HG +AL+ F +M+R+ V
Sbjct: 164 WNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV 223
Query: 173 KPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
+ ++ IA+L+AC +G + LG R+ +M + KI +ID+ R G ++
Sbjct: 224 AADYVSIIAVLAACADLGALTLGLWVHRF--VMPQEFKDNIKISN--SLIDMYSRCGCIE 279
Query: 230 EAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
A ++ +M + W S++ A N + D L
Sbjct: 280 FARQVFVKMA-KRTLVSWNSIIVGFAVNGFADESL 313
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 208/316 (65%), Gaps = 6/316 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +MQ
Sbjct: 214 WNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGE 273
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIE----QYGLNTIVPLNNALIDMYAKSGKIG 127
KPD + ML+ LSACA G ++ G +H ++ + G +T+ L NALIDMYAK G +
Sbjct: 274 KPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTV--LGNALIDMYAKCGSMT 331
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
AL+VF M++K+V TW ++I GLALHG EA+D+F +M + VKP+EITF+A+L AC
Sbjct: 332 SALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACS 391
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+V+ G YFN+M+ RY IEP ++ YGCM+D+L RAG L+EA + + M E N IW
Sbjct: 392 HGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIW 451
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+LL A I+G++EL E A Q L+K SG++ +LSNIYA +G W S +RK+M D
Sbjct: 452 RTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYASVGEWLGSENMRKLMDDS 511
Query: 308 GVKKMPGCSYIEVSKR 323
GV K GC+ ++ S +
Sbjct: 512 GVNKEAGCAVVDGSSK 527
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN------VKPDEI 76
G +AR +F+ + + + TLI G A P +A++++ RM + V+PD+
Sbjct: 56 GGTAHARLVFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKR 115
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
L ACA +GA E G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 116 TFPFVLRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGE 175
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+ + W+ MI+G A G A ++F + + VK + +++ +++A +G + R
Sbjct: 176 AREDAVAWSAMISGFARRGDIGAARELF---DESPVK-DLVSWNVMITAYAKLGDMAPAR 231
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAA 253
F+ R + + MI R G ++A +L +M + + SLL+A
Sbjct: 232 ELFDGAPDR-----DVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSA 286
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSN----IYAILGRWNESGKIRKVMRDMGV 309
GD++ G L + G +L N +YA G + ++ +M+D V
Sbjct: 287 CADSGDMDAGR-RLHRFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNV 345
Query: 310 K 310
Sbjct: 346 S 346
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 211/346 (60%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+MV+GYAK + AR +F M E+NV+SW LIAGY Q + EA+ LF ++ E++
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIW 382
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVPLNNALIDMYAKSGKI 126
P L+ACA L ++LG H +I ++G ++ + + N+LIDMY K G +
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
VFE M + ++W MI G A +G G EAL++F M + +P+ +T I +LSAC
Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSAC 502
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLVE GR YF M +G+ P + Y CM+DLLGRAG L EA L++ MP E +A +
Sbjct: 503 SHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVV 562
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WGSLLAA ++G++ LG+ + L++++P NSG Y +LSN+YA LGRW + ++RK MR
Sbjct: 563 WGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
MGV K PGCS+I + +H F+ D HP +Y IL + QMK
Sbjct: 623 MGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMK 668
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ K G L+ A LF+ M E++ SW +++G+AQ D+ EA+ M E+
Sbjct: 88 WNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDF 147
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E + +ALSACA L + +G IH I + + V + +AL+DMY+K + A +
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F++M +++++W ++I +G +AL++F RM ++P+EIT ++ SAC +
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+ G + + + ++D+ + + EA + RMP
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 42/286 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y+K + +A+ F+ M +N++SW +LI Y Q +A+ +F RM ++
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGKAL 130
PDEI + + SACA L A+ G IH + ++ N +V L NAL+DMYAK ++ +A
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV-LGNALVDMYAKCRRVNEAR 308
Query: 131 QVFE-------------------------------NMKNKSVITWTTMIAGLALHGLGRE 159
VF+ NM ++V++W +IAG +G E
Sbjct: 309 LVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEE 368
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRY----GIEPKIEQ 214
A+ +F ++R + P TF +L+AC ++ ++LGR+ + +I+K + G + I
Sbjct: 369 AVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFV 428
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+ID+ + G +++ + RM E + W +++ A N YG
Sbjct: 429 GNSLIDMYMKCGLVEDGRLVFERM-LERDNVSWNAMIVGYAQNGYG 473
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L C + +V +H I + ++ + + N L+D+Y K G + A +VF++M+ ++
Sbjct: 26 LDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNT 85
Query: 142 ITWTTMIAGLALHGLGREALDMFSRM----------------ERARVKP----------- 174
+W ++ L G EAL++F M +R R +
Sbjct: 86 FSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSE 145
Query: 175 ----NEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
NE +F + LSAC + + +G + I KSRY ++ + ++D+ + +
Sbjct: 146 DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLD--VYMGSALVDMYSKCRVVA 203
Query: 230 EAEKLLRRMPFEANAAIWGSLLA 252
A++ M N W SL+
Sbjct: 204 SAQRAFDDMDVR-NIVSWNSLIT 225
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 220/356 (61%), Gaps = 5/356 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K W +MV+GY G + AR LFE K+V+ WT ++ GY Q ++ +EA+ LFR MQ
Sbjct: 198 KCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 257
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD +++ L+ CAQ GA+E G+WIH YI + + + AL+DMYAK G I A
Sbjct: 258 RIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETA 317
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L VF MK + +WT++I GLA +G+ ALD++ ME V+ ++ITF+A+L+AC H
Sbjct: 318 LGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHG 377
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA---I 246
G V GRR F M R+ I+PK E Y C+IDLL RAG L EAE+L+ +M E + +
Sbjct: 378 GFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPV 437
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
+ SLL+A+ YG+V++ E + L K+E +S + +L+++YA RW + +R+ M+D
Sbjct: 438 YCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKD 497
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGD--TSHPDFDRLYQILCKINGQMKFAEHLQNE 360
+G++K PGCS IEV HEF+ G+ +SHP D + +L + M EH + E
Sbjct: 498 LGIRKFPGCSSIEVDGVSHEFIVGNDPSSHPKMDEINSMLHQTTHLMLDLEHEEIE 553
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 144/273 (52%), Gaps = 39/273 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+++ YA +G + +F+ M E++V+SW LI+ Y + +AI++F+RM E N+
Sbjct: 69 NSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNL 128
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
K DE +++ LSAC+ L +E+GE I+ Y+ ++ ++ V NAL+DM+ K G + KA
Sbjct: 129 KADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMS--VRTGNALVDMFCKCGCLDKAR 186
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR------------------------ 166
+F++M++K+V WT+M++G +G EA ++F R
Sbjct: 187 AIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDE 246
Query: 167 -------MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
M+ AR++P+ +++L+ C G +E G+ I ++R ++ + +
Sbjct: 247 ALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGT--AL 304
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+D+ + G ++ A + M E + A W SL+
Sbjct: 305 VDMYAKCGCIETALGVFYEMK-ERDTASWTSLI 336
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
++ A+ + + LF ++ + + PD + L + +L V GE +H Y + G
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
L + + N+L+ MYA GK+ +VF+ M + V++W +I+ HG +A+ +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 166 RMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
RM R + +K +E T ++ LSAC + +E+G R + + + + E + ++D+ +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEF--EMSVRTGNALVDMFCK 178
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G L +A + M + N W S+++
Sbjct: 179 CGCLDKARAIFDSMR-DKNVKCWTSMVSG 206
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 210/310 (67%), Gaps = 7/310 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVE 69
WN M++ YA+VGDL +A+ LF+ M +++ +SW ++IAGY Q + +AI LF M +
Sbjct: 325 WNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSED 384
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ KPDE+ M++ SAC LG + LG W + ++ + + + N+LI+MY++ G + A
Sbjct: 385 SRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDA 444
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ +F+ M + ++++ T+I+G A HG G E++++ S+M+ ++P+ IT+IAIL+AC H
Sbjct: 445 VLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHA 504
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL++ G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E +A I+GS
Sbjct: 505 GLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGS 559
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A++I+ VELGE A L K+EPHNSGNYA+LSNIYA GRW E K+R MR GV
Sbjct: 560 LLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGV 619
Query: 310 KKMPGCSYIE 319
KK G S++E
Sbjct: 620 KKTTGLSWLE 629
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 43/267 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
W TM+ G+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M N
Sbjct: 188 WTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 247
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWI--------------------------------- 97
V+PDE +S+C+ LG L E I
Sbjct: 248 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAA 307
Query: 98 HNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
H EQ G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG +
Sbjct: 308 HKIFEQLGVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 366
Query: 155 GLGREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
G +A+ +F M E +R KP+E+T +++ SAC H+G + LG +I+K + I+
Sbjct: 367 GESFKAIKLFEEMISSEDSR-KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQIS 424
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRM 238
I Y +I++ R G +Q+A + + M
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEM 451
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 42/266 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR LF+ M ++ V W +I+GY + EA TLF M + +
Sbjct: 123 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 182
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ I W +I +AK G + A
Sbjct: 183 RNVIT------------------W-----------------TTMITGHAKKGNLKTARMY 207
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M +SV++W M++G A G E + +F+ M V+P+E T+ ++S+C +G
Sbjct: 208 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 267
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAI-WGS 249
L + + G P ++D+ + G L+ A K+ ++ ++ +++ W +
Sbjct: 268 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 327
Query: 250 LLAASNIYGDVELGECALQHLIKLEP 275
+++A GD+ + +HL P
Sbjct: 328 MISAYARVGDLP----SAKHLFDKMP 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMDQPNEA-ITLFRRM-QVENVKPDEIAMLAALSACAQL 88
+F T +V +T ++ Y+Q+ ++ ++LF+ M Q ++KP+ + +
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
+ L ++ + G + + N ++ +YAK G I A ++F+ M +++V W MI
Sbjct: 103 SMLFLA-----HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 157
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+G G EA +F M + N IT+ +++ G ++ R YF+ M R
Sbjct: 158 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--- 214
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA----AIWGSLLAASNIYGDVELGE 264
+ + M+ + G +E +L M N W +++++ + GD L E
Sbjct: 215 --SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSE 272
Query: 265 CALQHL---IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ L + P NY + + + + + K+ +GV K
Sbjct: 273 SIVRKLDDKVGFRP----NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 318
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 212/337 (62%), Gaps = 1/337 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+TMV GY+K GD++ AR LF+ KN++ WTT+I+GYA+ Q EA+ L M+ +
Sbjct: 255 WSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGL 314
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D+ ++ L+ACA+ G + LG+ +H+ + + N+ IDMYAK G + A +
Sbjct: 315 RLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFR 374
Query: 132 VFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF MK K +++W +MI G +HG G +++++F+ M R KP+ TFI +L AC H G
Sbjct: 375 VFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAG 434
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR YF M+ YGI P+IE YGCM+DLLGR G+L+EA L+R MPFE NA I G+L
Sbjct: 435 LVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTL 494
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ DV+L ++L KL P + GN+++LSNIYA G W K+RK M D G +
Sbjct: 495 LGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQ 554
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
K G S IEV + VHEF D SHP +Y ++ ++
Sbjct: 555 KPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRL 591
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 129/250 (51%), Gaps = 11/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y + GD+ A +F M E++V+SW +++ G + + A+ +F M +
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP----E 218
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D ++ L + G ++ E+ IV + ++ Y+K+G + A +
Sbjct: 219 RDRVSWNTMLDGFTKAGEMDKA---FKLFERMAERDIVSW-STMVCGYSKNGDMDMARML 274
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ K+++ WTT+I+G A G +EA+++ ME++ ++ ++ FI+IL+AC G++
Sbjct: 275 FDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGML 334
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG++ + + ++SR+ K+ ID+ + G + +A ++ M E + W S++
Sbjct: 335 GLGKKMHDSFLRSRFRCSTKV--LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMI 392
Query: 252 AASNIYGDVE 261
I+G E
Sbjct: 393 HGFGIHGHGE 402
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 16/252 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR---RMQVENV 71
++A Y+ +L++A +F + + NV + LI Y+ + ++ F +M V+ V
Sbjct: 60 LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGV 119
Query: 72 KPDEIAMLAALSACAQLGA-VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
D L C + + L + +H ++E+ G + + N+LID Y + G + A+
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHV 189
+VF M+ + V++W +M+ GL +G AL +F M ER RV N +L
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWN-----TMLDGFTKA 234
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G ++ + F M R I + M+ + G + A L R P + N +W +
Sbjct: 235 GEMDKAFKLFERMAER-----DIVSWSTMVCGYSKNGDMDMARMLFDRCPVK-NLVLWTT 288
Query: 250 LLAASNIYGDVE 261
+++ G V+
Sbjct: 289 IISGYAEKGQVK 300
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 222/342 (64%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ +++ GY K+GD++ ARA+F+ + ++V++WT +I GYAQ ++A+ LFR M E
Sbjct: 349 FTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGP 408
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ + A LS + L +++ G+ +H + + V + NALI MY++SG I A +
Sbjct: 409 KPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARK 468
Query: 132 VFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F ++ + + +TWT+MI LA HGLG EA+++F +M R +KP+ IT++ +LSAC HVG
Sbjct: 469 IFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVG 528
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ YFN+MK+ + IEP Y CMIDLLGRAG L+EA +R MP E + WGSL
Sbjct: 529 LVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSL 588
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ ++ V+L + A + L+ ++P+NSG Y L+N + G+W ++ K+RK M+D VK
Sbjct: 589 LSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVK 648
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++++ +VH F D HP D +Y ++ KI ++K
Sbjct: 649 KEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIK 690
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 41/312 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
WNTM++ + + + A ALF+ MT+ +++SW ++I GY A+ F M + +
Sbjct: 214 WNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSS 273
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 124
+KPD+ + + LSACA +++LG+ IH +I + ++ + NALI MYAKSG
Sbjct: 274 LKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAH 333
Query: 125 ------------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLG 157
KIG A +F+++K++ V+ WT MI G A +GL
Sbjct: 334 RIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLI 393
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
+AL +F M R KPN T A+LS + ++ G++ + + R +
Sbjct: 394 SDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ-LHAVAIRLEEVSSVSVGNA 452
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELGECALQHLIKL 273
+I + R+G +++A K+ + + W S++ + +G +EL E L+ I L
Sbjct: 453 LITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR--INL 510
Query: 274 EPHNSGNYAILS 285
+P + +LS
Sbjct: 511 KPDHITYVGVLS 522
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 147/284 (51%), Gaps = 36/284 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++ +AK G+L++AR +F+ + + + +SWTT+I GY + A+ F RM +
Sbjct: 82 WNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGI 141
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------- 124
P + L++CA A+++G+ +H+++ + G + +VP+ N+L++MYAK G
Sbjct: 142 SPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKV 201
Query: 125 ------------------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ AL +F+ M + +++W ++I G G A
Sbjct: 202 VFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRA 261
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
L+ FS M + + +KP++ T ++LSAC + ++LG++ + +I+++ I + +
Sbjct: 262 LETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN--AL 319
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIYGDVE 261
I + ++G ++ A +++ + N + SLL GD++
Sbjct: 320 ISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDID 363
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 93 LGEWIHNYIEQYGLNTI-VPLNNALIDMY------------------------------- 120
+G IH I ++GL + V L N L+++Y
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
AK+G + A +VF+ + ++WTTMI G GL + A+ F RM + + P + TF
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 181 AILSACCHVGLVELGRRY--FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+L++C +++G++ F + + G+ P ++++ + G A+ + RM
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANS---LLNMYAKCGDSVMAKVVFDRM 206
Query: 239 PFEANAAIWGSLLA 252
+ + + W ++++
Sbjct: 207 RLK-DTSTWNTMIS 219
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 223/340 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G +++AR F+++ EKN+IS+ T+I YA+ EA+ LF ++ + +
Sbjct: 415 NSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMG 474
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +G + GE IH + + GL + NALI MY++ G I A QV
Sbjct: 475 ASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQV 534
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+M++++VI+WT++I G A HG +AL++F +M V+PNE+T+IA+LSAC HVGLV
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLV 594
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++F M + +G+ P++E Y C++D+LGR+G L EA + + MP++A+A +W + L
Sbjct: 595 NEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLG 654
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G++ELG+ A + +I+ EPH+ Y +LSN+YA + +W+E IRK M++ + K
Sbjct: 655 ACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKE 714
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS++EV +VH+F GDTSHP +Y L ++ ++K
Sbjct: 715 AGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 9/261 (3%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAI 60
TL R + M A + G + AR +F+ + + NV SWT +I GY Q EA+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LFR M + +V P+ + L ACA L A+ +GE + + + G +++ + N+LI MY
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMY 421
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
A+SG+I A + F+ + K++I++ T+I A + EAL++F+ +E + + TF
Sbjct: 422 ARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFA 481
Query: 181 AILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRR 237
++LS +G + G + + ++KS G+ K+ Q C +I + R G ++ A ++
Sbjct: 482 SLLSGAASIGTIGKGEQIHARVIKS--GL--KLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 238 MPFEANAAIWGSLLAASNIYG 258
M + N W S++ +G
Sbjct: 538 ME-DRNVISWTSIITGFAKHG 557
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 14/239 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL +A +FE M E+N ++WT +I Q EAI LF M +PD + +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNK 139
SACA + + LG+ +H+ ++GL + LI+MYAK G + A ++F+ + +
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 140 SVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V +WT MI G G EALD+F M V PN TF + L AC ++ + +G +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 199 FNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
F + ++ C +I + R+G + +A K + FE N + +++ A
Sbjct: 399 FT-----HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N++++ Y+K G A ++F LM + +++ISW+ +++ +A + A+ F M
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKS-GKIGKA 129
P+E AA AC+ V +G+ I ++ + G L + V + LIDM+ K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M ++ +TWT MI L G EA+D+F M + +P+ T ++SAC ++
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA---GYLQEAEKLLRRMPFEANAAI 246
L+ LG++ + R+G+ C+I++ + G + A K+ ++ + N
Sbjct: 285 ELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFS 342
Query: 247 WGSLLAA 253
W +++
Sbjct: 343 WTAMITG 349
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
++AI+ M + PD L C + + ++G +H + Q L N+L
Sbjct: 48 HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107
Query: 117 IDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
I +Y+K G+ KA +F M ++ +I+W+ M++ A + +G AL F M PN
Sbjct: 108 ISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 176 EITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGC-MIDLLGRA-GYLQEAE 232
E F A AC V +G F ++K+ Y ++ + GC +ID+ + G L A
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVIKTGY-LQSDV-CVGCGLIDMFVKGRGDLVSAF 225
Query: 233 KLLRRMPFEANAAIW 247
K+ +MP E NA W
Sbjct: 226 KVFEKMP-ERNAVTW 239
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 213/333 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M+ GYA+ G ++ ARALFE M E+NVISW+ ++ GY + +P+EA+ LF+RM +
Sbjct: 240 WCSMIDGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGI 299
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A + A +ACAQLGA+E G W+H+Y+E+ + V + ALIDMY K G++
Sbjct: 300 KPDRVAAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKL 359
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M +KSV+TW MI GL H G A+ +F +ME ++++ +A+L+AC H GL
Sbjct: 360 IFESMPDKSVVTWNVMIIGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGL 419
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G F+ M+ +G++PK+E YG ++DLLGRAG+L A + MP E +WGSLL
Sbjct: 420 ISEGLGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLL 479
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA + VEL E +++ L L + G Y +LSNIYA G W+ +IR++M G+KK
Sbjct: 480 AACRSHRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKK 539
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S IEV + HEFV G +SH D ++ +L
Sbjct: 540 DIGRSVIEVDGQTHEFVNGGSSHSCKDEVHLML 572
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 14/212 (6%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 95
++ W TLI +A P A+ F M+ V+PD A L ACA LG
Sbjct: 74 ASRDAFPWNTLIRLHAPA-SPRNALAYFACMRRAAVEPDAYTFPAVLKACA---CGVLGL 129
Query: 96 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
+H + G++ + NAL+ Y + G +VF++ + +++W +M+AG G
Sbjct: 130 PVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDH-GARDLVSWNSMVAGYVACG 188
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
A ++F M R + T I G V+ R F+ +R + +
Sbjct: 189 ELELAQELFDGMP-LRDAFSWATMIDAYGK--RSGGVDRARELFDETPNR-----DLVCW 240
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
MID R G + EA L MP E N W
Sbjct: 241 CSMIDGYARQGRMDEARALFEEMP-ERNVISW 271
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 210/310 (67%), Gaps = 7/310 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVE 69
WN M++ YA+VGDL +A+ LF+ M +++ +SW ++IAGY Q + +AI LF M +
Sbjct: 268 WNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSED 327
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ KPDE+ M++ SAC LG + LG W + ++ + + + N+LI+MY++ G + A
Sbjct: 328 SRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDA 387
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ +F+ M + ++++ T+I+G A HG G E++++ S+M+ ++P+ IT+IAIL+AC H
Sbjct: 388 VLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHA 447
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL++ G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E +A I+GS
Sbjct: 448 GLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGS 502
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A++I+ VELGE A L K+EPHNSGNYA+LSNIYA GRW E K+R MR GV
Sbjct: 503 LLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGV 562
Query: 310 KKMPGCSYIE 319
KK G S++E
Sbjct: 563 KKTTGLSWLE 572
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 43/267 (16%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
W TM+ G+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M N
Sbjct: 131 WTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 190
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWI--------------------------------- 97
V+PDE +S+C+ LG L E I
Sbjct: 191 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAA 250
Query: 98 HNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
H EQ G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG +
Sbjct: 251 HKIFEQLGVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 309
Query: 155 GLGREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
G +A+ +F M E +R KP+E+T +++ SAC H+G + LG +I+K + I+
Sbjct: 310 GESFKAIKLFEEMISSEDSR-KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQIS 367
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRM 238
I Y +I++ R G +Q+A + + M
Sbjct: 368 ISVYNSLINMYSRCGSMQDAVLIFQEM 394
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 42/267 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR LF+ M ++ V W +I+GY + EA TLF M + +
Sbjct: 66 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 125
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ I W +I +AK G + A
Sbjct: 126 RNVIT------------------W-----------------TTMITGHAKKGNLKTARMY 150
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M +SV++W M++G A G E + +F+ M V+P+E T+ ++S+C +G
Sbjct: 151 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 210
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAI-WGS 249
L + + G P ++D+ + G L+ A K+ ++ ++ +++ W +
Sbjct: 211 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 270
Query: 250 LLAASNIYGDVELGECALQHLIKLEPH 276
+++A GD+ + +HL P
Sbjct: 271 MISAYARVGDLP----SAKHLFDKMPQ 293
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 22/260 (8%)
Query: 60 ITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
++LF+ M Q ++KP+ + + + L ++ + G + + N ++
Sbjct: 16 VSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLA-----HVLKSGYDRDHYVRNGILG 70
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
+YAK G I A ++F+ M +++V W MI+G G EA +F M + N IT
Sbjct: 71 IYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT 130
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ +++ G ++ R YF+ M R + + M+ + G +E +L M
Sbjct: 131 WTTMITGHAKKGNLKTARMYFDKMPER-----SVVSWNAMLSGYAQGGAPEETIRLFNDM 185
Query: 239 PFEANA----AIWGSLLAASNIYGDVELGECALQHL---IKLEPHNSGNYAILSNIYAIL 291
N W +++++ + GD L E ++ L + P NY + + + +
Sbjct: 186 LSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRP----NYFVKTALLDMH 241
Query: 292 GRWNESGKIRKVMRDMGVKK 311
+ K+ +GV K
Sbjct: 242 AKCGNLEAAHKIFEQLGVYK 261
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 215/332 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++ A ALF+ M K+ +S++ L++GY Q + EA +F++MQ NV+
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G H + GL + + NALIDMYAK G+I + QV
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 383
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++ +++W TMIAG +HGLG+EA +F M P+ +TFI +LSAC H GLV
Sbjct: 384 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F++M YG+ P++E Y CM+DLL R G+L EA + ++ MP A+ +W +LL
Sbjct: 444 IEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +Y +++LG+ + + +L P +GN+ +LSNIY+ GR++E+ ++R + + G KK
Sbjct: 504 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 563
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H FV GD SHP +Y+ L
Sbjct: 564 PGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 131/243 (53%), Gaps = 7/243 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDE 75
YAK G L AR +F+ M +N ++W+ LI G+ + +A LF+ M + + P
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
IA +AL ACA L + +GE +H + + G++ + N+L+ MYAK+G I +A+ +F+
Sbjct: 228 IA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 285
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M K ++++ +++G +G EA +F +M+ V+P+ T ++++ AC H+ ++ G
Sbjct: 286 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
R + R G+ + +ID+ + G + + ++ MP + W +++A
Sbjct: 346 RCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYG 403
Query: 256 IYG 258
I+G
Sbjct: 404 IHG 406
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 18/235 (7%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT--LFRRMQVENVKPDEI 76
Y K L +A +F M +++++W ++AGYA + A+ L +MQ+ ++P+
Sbjct: 55 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 114
Query: 77 AMLAALSACAQLGAVELGEWIHNYI----------EQYGLNTIVPLNNALIDMYAKSGKI 126
++A L AQ GA+ G +H Y + L V L AL+DMYAK G +
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITFIAIL 183
A +VF+ M ++ +TW+ +I G L +A +F M + P I + L
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SAL 232
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
AC + + +G + ++ ++ G+ + ++ + +AG + +A L M
Sbjct: 233 RACASLDHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M V P+ AL AC+ L G IH + GL + ++ AL+DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD--MFSRMERARVKPNEITFIAIL 183
+ A +F M + ++ W M+AG A HG+ A+ + +M+ R++PN T +A+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 184 SACCHVGLVELGRRYFNIM---------KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
G + G S+ + + ++D+ + G L A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 235 LRRMPFEANAAIWGSLL 251
MP N W +L+
Sbjct: 181 FDAMPAR-NEVTWSALI 196
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 222/378 (58%), Gaps = 37/378 (9%)
Query: 12 WNTMVAGYAKVGDLNNA-------------------------------------RALFEL 34
WN+MVAGYA+ G ++A +FE
Sbjct: 206 WNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFER 265
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
MT+KN+ISW +IA Y PNEA++LF +M+ +KPD + + + L AC L A+ LG
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+H YIE+ L + L NAL+DMYAK G + +A VF+ M+ + V++WT+M++
Sbjct: 326 RRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
G G +A+ +F++M + P+ I F+++LSAC H GL++ GR YF +M +YGI P+IE
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ CM+DL GRAG ++EA +++MP E N +WG+LL+A ++ +++G A L +L
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 334
P SG Y +LSNIYA G W + +R M+ +G+KK+PG S +E++ +VH F+AGD H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 335 PDFDRLYQILCKINGQMK 352
P +Y L + G+MK
Sbjct: 566 PQAKNIYGELDVLVGKMK 583
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 35/241 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA Y K G L AR + + M ++V+SW +++AGYAQ Q ++A+ + + M N+
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D M A+LS ++E ++IHN +
Sbjct: 236 HDAGTM-ASLSPVVCYTSLENVQYIHN--------------------------------M 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M K++I+W MIA + + EA+ +F +ME +KP+ +T ++L AC + +
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGRR ++ + ++P + ++D+ + G L+EA + +M + W S+++
Sbjct: 323 FLGRRLHKYIE-KGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMS 380
Query: 253 A 253
A
Sbjct: 381 A 381
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 9/296 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y+ G+ + AR +F+ EKNV+ + +I Y + EA+++F+ M PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ L + +G +H+ I + GL+T + + NAL+ MY K G + +A +V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + V++W +M+AG A G +AL++ M+ + + T ++ C+ L +
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 251
+Y + M R + + + MI + EA L +M + +A SLL
Sbjct: 257 --QYIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
A + LG +++ K L+P+ A+L ++YA G E+ + MR
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 215/332 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++ A ALF+ M K+ +S++ L++GY Q + EA +F++MQ NV+
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G H + GL + + NALIDMYAK G+I + QV
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 383
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++ +++W TMIAG +HGLG+EA +F M P+ +TFI +LSAC H GLV
Sbjct: 384 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F++M YG+ P++E Y CM+DLL R G+L EA + ++ MP A+ +W +LL
Sbjct: 444 IEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +Y +++LG+ + + +L P +GN+ +LSNIY+ GR++E+ ++R + + G KK
Sbjct: 504 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 563
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H FV GD SHP +Y+ L
Sbjct: 564 PGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 131/243 (53%), Gaps = 7/243 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDE 75
YAK G L AR +F+ M +N ++W+ LI G+ + +A LF+ M + + P
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
IA +AL ACA L + +GE +H + + G++ + N+L+ MYAK+G I +A+ +F+
Sbjct: 228 IA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 285
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M K ++++ +++G +G EA +F +M+ V+P+ T ++++ AC H+ ++ G
Sbjct: 286 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
R + R G+ + +ID+ + G + + ++ MP + W +++A
Sbjct: 346 RCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYG 403
Query: 256 IYG 258
I+G
Sbjct: 404 IHG 406
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 18/235 (7%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT--LFRRMQVENVKPDEI 76
Y K L +A +F M +++++W ++AGYA + A+ L +MQ+ ++P+
Sbjct: 55 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 114
Query: 77 AMLAALSACAQLGAVELGEWIHNYI----------EQYGLNTIVPLNNALIDMYAKSGKI 126
++A L AQ GA+ G +H Y + L V L AL+DMYAK G +
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITFIAIL 183
A +VF+ M ++ +TW+ +I G L +A +F M + P I + L
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SAL 232
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
AC + + +G + ++ ++ G+ + ++ + +AG + +A L M
Sbjct: 233 RACASLDHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M V P+ AL AC+ L G IH + GL + ++ AL+DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD--MFSRMERARVKPNEITFIAIL 183
+ A +F M + ++ W M+AG A HG+ A+ + +M+ R++PN T +A+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 184 SACCHVGLVELGRRYFNIM---------KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
G + G S+ + + ++D+ + G L A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 235 LRRMPFEANAAIWGSLL 251
MP N W +L+
Sbjct: 181 FDAMPAR-NEVTWSALI 196
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 232/358 (64%), Gaps = 4/358 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V YAK G ++NA+ LF+ M +K++++ T +IAGYA+ +PNE+ LF +M+ +
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD++AM+ ++ACA+LGA+ +H+Y+ +Y L+ V L A+IDMYAK G I +
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD--VELGTAMIDMYAKCGSIDSSR 257
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M+ K+VI+W+ MI HG GREAL++F M + + PN ITFI++L AC H G
Sbjct: 258 EIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G + F++M YG+ P ++ Y CM+DLLGRAG L +A +L+ M E + IW +
Sbjct: 318 LVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAF 377
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ V+L E A + L+ L+ N G+Y +LSNIYA GRW + KIR +M +K
Sbjct: 378 LGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLK 437
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K+PG ++IEV ++ F AGD SH + +Y++L ++ +++ A ++ + S + + D
Sbjct: 438 KIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVD 495
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ AK DL A LF M E++ +SW+ +I G+ + FR + K
Sbjct: 39 NKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSK 98
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ + AC + +G IH+ + + GL+ + + L+DMYAK G I A Q+
Sbjct: 99 PDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQL 158
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K ++T T MIAG A G E+ +F +M R P+++ + I++AC +G +
Sbjct: 159 FDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAM 218
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
R + + RY ++ +E MID+ + G + + ++ RM + N W +++
Sbjct: 219 NKARLVHDYVCARRYSLD--VELGTAMIDMYAKCGSIDSSREIFDRME-QKNVISWSAMI 275
Query: 252 AASNIYG 258
A +G
Sbjct: 276 GAYGYHG 282
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + G+ + + N L+ M AK + A +F M+ + ++W+ MI G +G
Sbjct: 22 VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGD 81
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 215
F + RA KP+ + ++ AC + +GR + ++K+ G+ ++ +
Sbjct: 82 YERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKN--GLH--LDNF 137
Query: 216 GC--MIDLLGRAGYLQEAEKLLRRMP 239
C ++D+ + G + A++L RMP
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQLFDRMP 163
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 215/332 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++ A ALF+ M K+ +S++ L++GY Q + EA +F++MQ NV+
Sbjct: 379 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G H + GL + + NALIDMYAK G+I + QV
Sbjct: 439 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 498
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++ +++W TMIAG +HGLG+EA +F M P+ +TFI +LSAC H GLV
Sbjct: 499 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 558
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F++M YG+ P++E Y CM+DLL R G+L EA + ++ MP A+ +W +LL
Sbjct: 559 IEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +Y +++LG+ + + +L P +GN+ +LSNIY+ GR++E+ ++R + + G KK
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 678
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IE++ +H FV GD SHP +Y+ L
Sbjct: 679 PGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 131/243 (53%), Gaps = 7/243 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV---KPDE 75
YAK G L AR +F+ M +N ++W+ LI G+ + +A LF+ M + + P
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
IA +AL ACA L + +GE +H + + G++ + N+L+ MYAK+G I +A+ +F+
Sbjct: 343 IA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M K ++++ +++G +G EA +F +M+ V+P+ T ++++ AC H+ ++ G
Sbjct: 401 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
R + R G+ + +ID+ + G + + ++ MP + W +++A
Sbjct: 461 RCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYG 518
Query: 256 IYG 258
I+G
Sbjct: 519 IHG 521
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA---ITLFRRMQVENVKPDEIAML 79
G L+ A LF+ + +V ++ LI Y+ P A + L+RRM V P+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSS-SSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
AL AC+ L G IH + GL + ++ AL+DMY K + A +F M +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 140 SVITWTTMIAGLALHGLGREALD--MFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
++ W M+AG A HG+ A+ + +M+ R++PN T +A+L G + G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 198 YFNIM---------KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
S+ + + ++D+ + G L A ++ MP N W
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 249 SLL 251
+L+
Sbjct: 309 ALI 311
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 18/235 (7%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT--LFRRMQVENVKPDEI 76
Y K L +A +F M +++++W ++AGYA + A+ L +MQ+ ++P+
Sbjct: 170 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 229
Query: 77 AMLAALSACAQLGAVELGEWIHNYI----------EQYGLNTIVPLNNALIDMYAKSGKI 126
++A L AQ GA+ G +H Y + L V L AL+DMYAK G +
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 289
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITFIAIL 183
A +VF+ M ++ +TW+ +I G L +A +F M + P I + L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SAL 347
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
AC + + +G + ++ ++ G+ + ++ + +AG + +A L M
Sbjct: 348 RACASLDHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 210/310 (67%), Gaps = 10/310 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ G+ K G ++ AR +F++M EK+V SW+T+I+GYAQ + P+ A+ LF M V+
Sbjct: 395 NVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVE 454
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIGK 128
P+EI M++ SA A LG + G W H Y+ N ++PLN+ A+IDMYAK G I
Sbjct: 455 PNEITMVSVFSAIAALGKLPEGRWAHEYV----CNKVIPLNDNLSAAIIDMYAKCGSIDT 510
Query: 129 ALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
AL VF +K+K+ V W +I GLA+HG +L++FS ++R +K N ITF+ +LSAC
Sbjct: 511 ALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSAC 570
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
CH GLVE+G RYF MK+++G+EP I+ YGC++DLLGR G L+EAE+++R MP +A+ I
Sbjct: 571 CHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVI 630
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WG+LLA+S +G+VE+GE A ++L +L+P + +LSN+YA G W ++ +R+ ++
Sbjct: 631 WGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQS 690
Query: 307 MGVKKMPGCS 316
+ + PG S
Sbjct: 691 QRMIRSPGYS 700
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 33/284 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G ++ AR LFE + E++V SW +I G+ QM + +A+ L+ M+ ++
Sbjct: 262 WNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDL 321
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-------NTIVPL------------ 112
P+E+ ++ LSAC Q ++E G H+ I + G TI+
Sbjct: 322 HPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYL 381
Query: 113 ------------NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+N +I + K+G I +A Q+F+ M K V +W+TMI+G A + L A
Sbjct: 382 QYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVA 441
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
LD+F M ++V+PNEIT +++ SA +G + GR + ++ I +ID
Sbjct: 442 LDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV-IPLNDNLSAAIID 500
Query: 221 LLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVELG 263
+ + G + A + R++ + + + W +++ ++G L
Sbjct: 501 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 544
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 74/362 (20%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M++GY K+ L NAR LF M E+ +S+TT+I G AQ D EAI +F+ M+ V
Sbjct: 131 NIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVA 190
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTI-------------------- 109
P+E+ M + +SAC+ +G + +H + + +GL I
Sbjct: 191 PNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRL 250
Query: 110 ---VPLNNA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+P+ N ++ Y KSG + +A ++FE + + V +W MI G R+AL
Sbjct: 251 FNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKAL 310
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK---------------SRY 206
++S M ++ + PNE+ + +LSAC +E GR++ +++ S Y
Sbjct: 311 LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFY 370
Query: 207 GIEPKIE----QY-----------GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+I+ QY MI + G + +A ++ MP E + W +++
Sbjct: 371 AACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFSWSTMI 429
Query: 252 AASNIYGDVELGECALQHL-----IKLEPHNSGNYAILSNIYAI----LGRWNESGKIRK 302
+ Y EL + AL K+EP+ ++ S I A+ GRW K
Sbjct: 430 SG---YAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNK 486
Query: 303 VM 304
V+
Sbjct: 487 VI 488
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD-EIAMLAALSACAQLGAVELGEWIHN 99
+ W + + +P + ++ F + + D E+++++AL CA A+ G+ IH
Sbjct: 26 LKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQIHA 85
Query: 100 YIEQYGLNTIVPLNNALIDMYAKSG-------------------------------KIGK 128
+ +YG N+ + N+LI+MY K G ++
Sbjct: 86 IVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLEN 145
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A Q+F M + +++TTMI GLA + EA+++F M A V PNE+T +++SAC H
Sbjct: 146 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSH 205
Query: 189 VG 190
+G
Sbjct: 206 IG 207
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 205/313 (65%), Gaps = 1/313 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ K+GDL LF+ M +++V+SW +I+ AQ + EA +FR M +
Sbjct: 177 WNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGF 236
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKAL 130
+PD+ ++ L CA+LG V+ GEWIH+Y + GL ++ + N+L+D Y K G + A
Sbjct: 237 EPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAW 296
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF M K+V++W MI+GL L+G G +++F +M R V P++ TF+ +L+ C H G
Sbjct: 297 KVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAG 356
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ GR F+ M ++ + PK+E YGC++DLLGR G+++EA L+R MP NAA+WG+L
Sbjct: 357 FVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGAL 416
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +GD E+ E A + L++LEP NSGNY +LSN+YA +WNE K+R +M+ +G+K
Sbjct: 417 LSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIK 476
Query: 311 KMPGCSYIEVSKR 323
K PG S ++ S R
Sbjct: 477 KNPGQSALQDSHR 489
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 33/268 (12%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACA 86
A +F N++ + ++I ++ +++ F M++ N+ PD L A +
Sbjct: 60 ATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATS 119
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
L +LG+ +H ++ G P+ L+++Y+ GK+ A +VF+ M ++ V+ W
Sbjct: 120 YLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNI 179
Query: 147 MIAGLALHGLGREALDMFSRMERARV-------------------------------KPN 175
MI G G L +F RM + V +P+
Sbjct: 180 MINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPD 239
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ T + +L C +G V+ G + + + I ++D + G L+ A K+
Sbjct: 240 DATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVF 299
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELG 263
M + N W ++++ + G ELG
Sbjct: 300 NEMT-KKNVVSWNAMISGLGLNGKGELG 326
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
L R + N++V Y K G+L A +F MT+KNV+SW +I+G + + LF
Sbjct: 271 LLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELF 330
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAK 122
+M + V P + + L+ CA G V+ G I + + ++ L+ + ++D+ +
Sbjct: 331 EKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGR 390
Query: 123 SGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G + +A + NM + W +++ HG RE ++ ++ E R++P
Sbjct: 391 CGHVKEAYDLIRNMPLMPNAALWGALLSACRTHG-DREVAEIAAK-ELVRLEPGNSGNYV 448
Query: 182 ILS 184
+LS
Sbjct: 449 LLS 451
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 231/357 (64%), Gaps = 7/357 (1%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
+ + R LY WNT++A Y G+++ A+ LF+ M E++V+SW+T+IAGY Q+ EA+
Sbjct: 175 WAVDRDLYS-WNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALD 233
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
F +M KP+E +++AL+AC+ L A++ G+WIH YI + + L ++IDMYA
Sbjct: 234 FFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYA 293
Query: 122 KSGKIGKALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
K G+I A +VF E+ + V W MI G A+HG+ EA+++F +M+ ++ PN++TFI
Sbjct: 294 KCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFI 353
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
A+L+AC H +VE G+ YF +M S Y I P+IE YGCM+DLL R+G L+EAE ++ MP
Sbjct: 354 ALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPM 413
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
+ AIWG+LL A IY D+E G + + ++P++ G + +LSNIY+ GRWNE+ +
Sbjct: 414 APDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARIL 473
Query: 301 R---KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
R ++ RD KK+PGCS IE+ H+F+ GD SHP +Y L ++ ++K A
Sbjct: 474 REKNEISRDR--KKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSA 528
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 34/272 (12%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP-NEAITLFRRM-QVENVKPDEIA 77
A L+ A LF+ + + ++ + T+I ++ + ++ +FR + Q + P+ +
Sbjct: 58 AACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYS 117
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV----- 132
+ A SAC V+ GE + + + GL V + NALI MY K G +G++ +V
Sbjct: 118 FVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAV 177
Query: 133 --------------------------FENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
F+ M+ + V++W+T+IAG G EALD F +
Sbjct: 178 DRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHK 237
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
M + KPNE T ++ L+AC ++ ++ G ++ + + I+ +ID+ + G
Sbjct: 238 MLQIGPKPNEYTLVSALAACSNLVALDQG-KWIHAYIGKGEIKMNERLLASIIDMYAKCG 296
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++ A ++ + +W +++ ++G
Sbjct: 297 EIESASRVFFEHKVKQKVWLWNAMIGGFAMHG 328
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 222/378 (58%), Gaps = 37/378 (9%)
Query: 12 WNTMVAGYAKVGDLNNA-------------------------------------RALFEL 34
WN+MVAGYA+ G ++A +FE
Sbjct: 206 WNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFER 265
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
MT+KN+ISW +IA Y PNEA++LF +M+ +KPD + + + L AC L A+ LG
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+H YIE+ L + L NAL+DMYAK G + +A VF+ M+ + V++WT+M++
Sbjct: 326 RRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
G G +A+ +F++M + P+ I F+++LSAC H GL++ GR YF +M +YGI P+IE
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ CM+DL GRAG ++EA +++MP E N +WG+LL+A ++ +++G A L +L
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 334
P SG Y +LSNIYA G W + +R M+ +G+KK+PG S +E++ +VH F+AGD H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 335 PDFDRLYQILCKINGQMK 352
P +Y L + G+MK
Sbjct: 566 PQAKNIYGELDVLVGKMK 583
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 35/241 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA Y K G L AR + + M ++V+SW +++AGYAQ Q ++A+ + + M N+
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D M A+LS ++E ++IHN +
Sbjct: 236 HDAGTM-ASLSPVVCYTSLENVQYIHN--------------------------------M 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M K++I+W MIA + + EA+ +F +ME +KP+ +T ++L AC + +
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGRR ++ + + P + ++D+ + G L+EA + +M + W S+++
Sbjct: 323 FLGRRLHKYIE-KGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMS 380
Query: 253 A 253
A
Sbjct: 381 A 381
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 9/296 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y+ G+ + AR +F+ EKNV+ + +I Y + EA+++F+ M PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ L + +G +H+ I + GL+T + + NAL+ MY K G + +A +V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + V++W +M+AG A G +AL++ M+ + + T ++ C+ L +
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 251
+Y + M R + + + MI + EA L +M + +A SLL
Sbjct: 257 --QYIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
A + LG +++ K L P+ A+L ++YA G E+ + MR
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 217/335 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G +N A LF+ + K+ IS+ L++GY Q + EA +F++MQ NV+
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + AC+ L A++ G H + GL + N+LIDMYAK G+I + QV
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQV 464
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +++W TMIAG +HGLG+EA +F M+ +P+++TFI +++AC H GLV
Sbjct: 465 FDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLV 524
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F+ M +YGI P++E Y CM+DLL R G+L EA + ++ MP +A+ +WG+LL
Sbjct: 525 TEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLG 584
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +++LG+ + + KL P +GN+ +LSNI++ GR++E+ ++R + + G KK
Sbjct: 585 ACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKS 644
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
PGCS+IE++ +H FV GD SHP +Y L I
Sbjct: 645 PGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNI 679
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 3/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIA 77
YAK L A +F MT +N ++W+ LI G+ D+ EA LF+ M VE + +
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ +AL CA L + +G +H + + G++ + N+L+ MYAK+G I +A +F+ +
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K I++ +++G +G EA +F +M+ V+P+ T ++++ AC H+ ++ GR
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRC 428
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ R G+ + +ID+ + G + + ++ +MP + W +++A I+
Sbjct: 429 SHGSVIIR-GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIH 486
Query: 258 G 258
G
Sbjct: 487 G 487
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K W + + G L AR +F+ + + ++ LI Y+ + AI L+R M
Sbjct: 34 KEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYF 93
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V P++ L AC+ L + G IH + GL+T + ++ ALID+Y + + G A
Sbjct: 94 RVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPA 153
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREAL-DMFSRMERARVKPNEITFIAIL 183
VF M + V+ W M+AG A HG+ A+ + +R ++PN T +++L
Sbjct: 154 ANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLL 208
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 7/248 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIA 77
Y + A +F M ++V++W ++AGYA + AI MQ ++P+
Sbjct: 144 YIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAST 203
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNT---IVPLNNALIDMYAKSGKIGKALQVFE 134
+++ L AQ GA+ G +H Y + L+ V + AL+DMYAK + A +VF
Sbjct: 204 LVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFH 263
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA-ILSACCHVGLVE 193
M ++ +TW+ +I G L EA ++F M + T +A L C + +
Sbjct: 264 GMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLR 323
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+G + ++ ++ GI + ++ + +AG + EA L + + + +G+LL+
Sbjct: 324 MGTQLHALL-AKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALLSG 381
Query: 254 SNIYGDVE 261
G E
Sbjct: 382 YVQNGKAE 389
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 219/342 (64%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+ AR +F + + +V++WT +I GY Q N+AI +F+ M E
Sbjct: 311 FTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGP 370
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LSA + + ++ G+ IH + G + NAL MYAK+G I A +
Sbjct: 371 RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF ++ N+ ++WT+MI LA HGLG EA+++F +M +KP+ IT++ +LSAC H G
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGG 490
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR YF++MK+ + I+P + Y CM+DL GRAG LQEA K + MP E + WGSL
Sbjct: 491 LVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSL 550
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ +Y +V+L + A + L+ +EP+NSG Y+ L+N+Y+ G+W+++ KIRK+M+ GVK
Sbjct: 551 LSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++++ + H F D HP D +Y+++ KI ++K
Sbjct: 611 KEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIK 652
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 137/259 (52%), Gaps = 35/259 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GYAK G L A +F+L+ ++ +SWTT+I GY QM + +AI +F M + V
Sbjct: 44 WNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKV 103
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + + L++CA G+ +G+ +H+++ + GL+ VP+ N+L++MYAK+G + A
Sbjct: 104 LPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKV 163
Query: 132 VFENMK-------------------------------NKSVITWTTMIAGLALHGLGREA 160
VF+ MK + +++W +MIAG HG EA
Sbjct: 164 VFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEA 223
Query: 161 LDMFSR-MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
L FS ++ +KP+ + + LSAC ++ + G++ I+++ + + +
Sbjct: 224 LQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN--AL 281
Query: 219 IDLLGRAGYLQEAEKLLRR 237
I + ++G ++ A +++ +
Sbjct: 282 ISMYAKSGGVEIARRIIEQ 300
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 40/292 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVEN 70
WN M++ + G ++ A A FEL++E++++SW ++IAG Q NEA+ F ++ +
Sbjct: 176 WNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTS 235
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------- 123
+KPD ++ +ALSACA L + G+ IH YI + + + NALI MYAKS
Sbjct: 236 LKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIAR 295
Query: 124 --------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
G I A Q+F ++K+ V+ WT MI G +GL
Sbjct: 296 RIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLN 355
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYG 216
+A+++F M +PN T A+LSA V + G++ + + ++S + P +
Sbjct: 356 NDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN-- 413
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
+ + +AG + A K+ + + W S++ A +G LGE A++
Sbjct: 414 ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGEEAIE 462
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 205/310 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G+L AR LF+ M ++VISWT++I+ Y+Q Q +A+ LF+ M V V
Sbjct: 965 WNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV 1024
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDEI + + LSACA +GA+++GE +H YI +Y +N + + NALIDMY K G + K L
Sbjct: 1025 KPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLS 1084
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M + ++WT++IAGLA++G AL++FS M R V+P TF+ +L AC H G+
Sbjct: 1085 VFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGV 1144
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G YF M+ YG+ P+++ YGC++DLL R+G L A + ++RMP + + +W LL
Sbjct: 1145 VDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILL 1204
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+AS ++G++ L E A + L++ +P NSGNY + SN YA RW + K+R++M + V K
Sbjct: 1205 SASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHK 1264
Query: 312 MPGCSYIEVS 321
S +E++
Sbjct: 1265 PSASSSVEIN 1274
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 144/280 (51%), Gaps = 33/280 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GYA +L AR +F+ M+E++++SW +LI GY + + +E + +F M++ +VK
Sbjct: 834 NALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVK 893
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------- 119
D + M+ + AC LG + + + YIE+ + V L N LIDM
Sbjct: 894 GDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRV 953
Query: 120 ------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
Y K+G + A ++F++M ++ VI+WT+MI+ + G +A+
Sbjct: 954 FDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAV 1013
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M +VKP+EIT ++LSAC H+G +++G ++ +Y + I +ID+
Sbjct: 1014 RLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIR-KYDVNADIYVGNALIDM 1072
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G +++ + M + ++ W S++A + G +
Sbjct: 1073 YCKCGAVEKGLSVFEEMG-KRDSVSWTSVIAGLAVNGSAD 1111
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 148/319 (46%), Gaps = 31/319 (9%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A LF + + W +I G++Q +QP EAI + M + + + + L ACA+
Sbjct: 749 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 808
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
+ V +H + + G ++ + ++NALI YA ++G A +VF+ M + +++W ++
Sbjct: 809 ISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL 867
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV---GLVELGRRYFNIMKS 204
I G E L +F M A VK + +T + ++ AC + G+V+ Y K
Sbjct: 868 ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENK- 926
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+E + +ID+ GR + A ++ RM + N W +++ G++
Sbjct: 927 ---VEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR-DRNMVSWNAMIMGYGKAGNL---- 978
Query: 265 CALQHLIKLEPHNSG-NYAILSNIYAILGRWNESGKIRKVMRDMGVKK-----------M 312
A + L PH ++ + + Y+ G++ GK ++ ++M V K +
Sbjct: 979 VAARKLFDDMPHRDVISWTSMISSYSQAGQF---GKAVRLFQEMMVTKVKPDEITVASVL 1035
Query: 313 PGCSYI---EVSKRVHEFV 328
C++I +V + VHE++
Sbjct: 1036 SACAHIGALDVGEAVHEYI 1054
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 222/351 (63%), Gaps = 3/351 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNTM+ G + GDL AR LF M +KNVISWTT+I G Q + EA+ +F RM N
Sbjct: 252 WNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNG 311
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP++ ++ L AC+ L + G+ +H I + + +ALI+MY+K G++G A
Sbjct: 312 AKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTAR 371
Query: 131 QVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
++F++ + +++W +IA A HG G+EA++ F M ++ KP+++T++ +LSAC H
Sbjct: 372 KMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSH 431
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE G +YF+ + I + + Y C++DL GRAG L+EA + R+ + +A +WG
Sbjct: 432 AGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWG 491
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LLA N++ +V++G+ A + L+++EP N+G Y +LSNIYA G+W E+ ++R M+D G
Sbjct: 492 ALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKG 551
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+KK PGCS+IEV RVH FV GD SH +Y +L ++ +MK A + N
Sbjct: 552 LKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 602
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G +++A LFE M E+NV+SW T+++ AQ + EA LF RM +V
Sbjct: 164 WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV 223
Query: 72 KPDEIAMLA-----ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
AM+A AL ++ +L W N +I ++G +
Sbjct: 224 -ISWTAMIAGLLDEALDLFERMPERDLPSW-----------------NTMITGLIQNGDL 265
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSA 185
+A ++F M K+VI+WTTMI G G EAL +FSRM KPN+ TF+++L A
Sbjct: 266 RRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGA 325
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR-MPFEANA 244
C ++ + G++ I+ S+ + +I++ + G L A K+ M + +
Sbjct: 326 CSNLAGLGEGQQVHQII-SKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDL 384
Query: 245 AIWGSLLAASNIYG 258
W ++AA +G
Sbjct: 385 VSWNGIIAAYAHHG 398
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 22/249 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ +K G + AR LF+ M E +VI+WTT+I+GY + EA LF R+ + K
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAK 127
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + A + + + E + N + N V N +ID YA++G+I A+ +
Sbjct: 128 KNVVTWTAMVGGYIRSNKISDAEKLFNEMP----NKNVVSWNTMIDGYAQNGRIDSAMYL 183
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M ++V++W T+++ LA G EA +F RM V I++ A+++ GL+
Sbjct: 184 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV----ISWTAMIA-----GLL 234
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ F M R + + MI L + G L+ A KL MP + N W +++
Sbjct: 235 DEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMIT 288
Query: 253 ASNIYGDVE 261
G+ E
Sbjct: 289 GCVQEGESE 297
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 210/344 (61%), Gaps = 2/344 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V Y + GD+ +A +F K++++WT ++ GYAQ P +A+ +F RM +
Sbjct: 211 WTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGM 270
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
DE+++ A+SACAQLGA+ W+ E+ G V + + L+DMYAK G I +A +
Sbjct: 271 VIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASK 330
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 190
VF M+ K+V T+++MIAGLA HG EA+ +F M RA V+PN +TFI +L+AC H G
Sbjct: 331 VFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAG 390
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V GR YF MK +YGI P + Y CM+DLLGRAG + EA L+R M + +WG+L
Sbjct: 391 MVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGAL 450
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G E+ + +HL KLEP + GNY +LSNI A G+W E K+R +MR +K
Sbjct: 451 LGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLK 510
Query: 311 KMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K P S E VH+F AGD +HP + + L ++ ++K
Sbjct: 511 KDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKL 554
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT------------------------- 146
+ N+LI Y G +G A +VF+ M K VI+WT+
Sbjct: 179 VENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKD 238
Query: 147 ------MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR--Y 198
M+ G A + + +AL++F RM + +E++ +SAC +G + RR +
Sbjct: 239 MVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGAL---RRAAW 295
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G + ++D+ + G + EA K+ M E N + S++A +G
Sbjct: 296 VQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQ-EKNVYTYSSMIAGLASHG 354
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 223/346 (64%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ Y + D+++AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ + +KP
Sbjct: 169 TLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+EI +L+ LS+CA LG+++LG+WIH Y +++ V +N ALIDM+AK G + A+ +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
E M+ K W+ MI A HG +++ MF RM V+P+EITF+ +L+AC H G VE
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR+YF+ M S++GI P I+ YG M+DLL AG L++A + + ++P +W LLAA
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ + +++L E + + +L+ + G+Y ILSN+YA +W +RKVM+D K+P
Sbjct: 409 CSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IEV+ VHEF +GD +L++ L ++ ++K + ++ +
Sbjct: 469 GCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 121/234 (51%), Gaps = 2/234 (0%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LFE M+E +++ + ++ GY++ P E +LF + + + PD + L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
A+E G +H + GL+ V + LI+MY + + A VF+ + V+ + M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM 201
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
I G A EAL +F M+ +KPNEIT +++LS+C +G ++LG ++ + ++
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHS 260
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
++ +ID+ + G L +A + +M ++ A W +++ A +G E
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMIVAYANHGKAE 313
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ M+ YA G + +++ +F RM+ ENV
Sbjct: 299 WSAMIVAYANHG-------------------------------KAEKSMLMFERMRSENV 327
Query: 72 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PDEI L L+AC+ G VE G ++ + ++G+ + +++D+ + +G + A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAY 387
Query: 131 QVFENMK-NKSVITWTTMIAGLALHG 155
+ + + + + + W ++A + H
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHN 413
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 224/344 (65%), Gaps = 3/344 (0%)
Query: 19 YAKVG-DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEI 76
YAK G ++ +R +FE + +++ W T+I+GY+Q + + EA+ FR+MQ PD+
Sbjct: 286 YAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDC 345
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKALQVFEN 135
+ + A+SAC+ L + G+ H + + + + +NNAL+ MY+K G + A ++F+
Sbjct: 346 SFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQR 405
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M + +T ++IAG A HG+G E+L++F +M A + P IT ++ILSAC H G VE G
Sbjct: 406 MPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEG 465
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
++YFN+MK +GIEP+ E Y CMIDLLGRAG L EAE+L+ MPF +A W +LL A
Sbjct: 466 KKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACR 525
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 315
YG++EL E A ++LEP N+ Y +L+++Y+ +W E+ +IRK+MRD G++K PGC
Sbjct: 526 KYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGC 585
Query: 316 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
S+IE++KRVH FVA D SHP ++ L ++ +MK A ++ +
Sbjct: 586 SWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPD 629
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K G+L +AR LF+ M + N ++ ++IAGYAQ E++ LF +M ++
Sbjct: 384 NALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIA 443
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P I +++ LSACA G VE G+ N ++ +G+ + +ID+ ++GK+ +A +
Sbjct: 444 PTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAER 503
Query: 132 VFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
+ + M + W ++ +G L +A + F ++E P
Sbjct: 504 LIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 9/262 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N ++A YAK ++ A LF+ + + +++S+ TLI YA A++LF M+ +
Sbjct: 77 FNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGL 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D ++AC V L +H+ G ++ V + N+L+ Y+K+G + +A
Sbjct: 137 VMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEM 194
Query: 132 VFENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF M + ++W +MI H G +AL ++ M + + T ++L+ V
Sbjct: 195 VFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCV 254
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY-LQEAEKLLRRMPFEANAAIWG 248
+ G + F+ + G +ID+ + G + E+ K+ + ++ +W
Sbjct: 255 EDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEIC-GSDLVVWN 312
Query: 249 SLLA--ASNIYGDVELGECALQ 268
++++ + N VE EC Q
Sbjct: 313 TMISGYSQNKELSVEALECFRQ 334
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 220/346 (63%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++V YAK + +A+ LFE M K++++WT +I YA + E++ LF RM+ E V P
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVP 199
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D++AM+ ++ACA+LGA+ + ++YI + G + V L A+IDMYAK G + A +VF
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ MK K+VI+W+ MIA HG G++A+D+F M + PN +TF+++L AC H GL+E
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G R+FN M + + P ++ Y CM+DLLGRAG L EA +L+ M E + +W +LL A
Sbjct: 320 EGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
I+ +EL E A L++L+P N G+Y +LSNIYA G+W + K R +M +KK+P
Sbjct: 380 CRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIP 439
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G ++IEV + ++F GD SHP +Y++L + +++ A ++ +
Sbjct: 440 GWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPD 485
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA+ +++A +LF+ +T ++ +W+ ++ G+A+ FR + V
Sbjct: 39 NKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVT 98
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + C +++G IH+ + ++GL + + +L+DMYAK + A ++
Sbjct: 99 PDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRL 158
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M +K ++TWT MI A E+L +F RM V P+++ + +++AC +G +
Sbjct: 159 FERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAM 217
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R+ N R G + MID+ + G ++ A ++ RM E N W +++A
Sbjct: 218 HRA-RFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-EKNVISWSAMIA 275
Query: 253 ASNIYG 258
A +G
Sbjct: 276 AYGYHG 281
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H ++ G + + N L+ YA+ I A +F+ + + TW+ M+ G A G
Sbjct: 22 VHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGD 81
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
F + R V P+ T ++ C +++GR +++ ++G+
Sbjct: 82 HAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVV-LKHGLLSDHFVCA 140
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++D+ + +++A++L RM + W ++ A
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMIGA 176
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 223/345 (64%), Gaps = 13/345 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
W M++GYA++G+ ++A LFE M E++V +W LIAG AQ EAI LF+RM +
Sbjct: 213 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLAL 272
Query: 69 -------ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
EN KP++ + +ALSAC G + LG+WIH Y+ + ++NAL+DMY
Sbjct: 273 EGNNNDREN-KPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYG 331
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITF 179
K G + A +VF+ + K++ +W ++I LALHG A+D+F+ + VKPNE+TF
Sbjct: 332 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTF 391
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ +L+AC H GLVE G YF +M+ Y IEP+IE +GC+IDLLGRAG +EA +++R M
Sbjct: 392 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 451
Query: 240 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 299
E + +WGSLL A I+G +L E +++ LI+++P N G +L+NIYA G+W+E K
Sbjct: 452 IEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRK 511
Query: 300 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+R+++++ K PGCS+IEV +V++F + D SHP + +Y+ L
Sbjct: 512 VRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTL 556
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 46/280 (16%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLA 80
+ DL AR +F+ +T NV +T +I YA P A L+R M ++P+
Sbjct: 89 LADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPH 148
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK-SGKIGKALQVFENMKNK 139
L +C + + +H + + G + A++D Y++ S IG A Q+F+ M +
Sbjct: 149 VLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLER 208
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARV--------------------------- 172
+V++WT MI+G A G A+++F M V
Sbjct: 209 TVVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMV 268
Query: 173 -------------KPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 218
KPN+ T + LSAC H G++ LG+ + K+ G + I +
Sbjct: 269 LLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISN--AL 326
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+D+ G+ G L+ A ++ + + N W SL+ ++G
Sbjct: 327 LDMYGKCGNLKVARRVFDMITLK-NLTSWNSLINCLALHG 365
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 222/351 (63%), Gaps = 3/351 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNTM+ G + GDL AR LF M +KNVISWTT+I G Q + EA+ +F RM N
Sbjct: 273 WNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNG 332
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP++ ++ L AC+ L + G+ +H I + + +ALI+MY+K G++G A
Sbjct: 333 AKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTAR 392
Query: 131 QVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
++F++ + +++W +IA A HG G+EA++ F M ++ KP+++T++ +LSAC H
Sbjct: 393 KMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSH 452
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE G +YF+ + I + + Y C++DL GRAG L+EA + R+ + +A +WG
Sbjct: 453 AGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWG 512
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LLA N++ +V++G+ A + L+++EP N+G Y +LSNIYA G+W E+ ++R M+D G
Sbjct: 513 ALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKG 572
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+KK PGCS+IEV RVH FV GD SH +Y +L ++ +MK A + N
Sbjct: 573 LKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 623
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 28/273 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G +++A LFE M E+NV+SW T+++ AQ + EA LF RM +V
Sbjct: 149 WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV 208
Query: 72 KPDEIAMLAALSACAQLGAVEL----------GEW---IHNYIEQYGLNTI--------- 109
AM+A LS ++ L W I Y + L+
Sbjct: 209 -ISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPE 267
Query: 110 --VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
+P N +I ++G + +A ++F M K+VI+WTTMI G G EAL +FSRM
Sbjct: 268 RDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRM 327
Query: 168 ERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
KPN+ TF+++L AC ++ + G++ I+ S+ + +I++ + G
Sbjct: 328 LSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII-SKTVYQDSTFVVSALINMYSKCG 386
Query: 227 YLQEAEKLLRR-MPFEANAAIWGSLLAASNIYG 258
L A K+ M + + W ++AA +G
Sbjct: 387 ELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHG 419
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 25/300 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W MV GY + +++A LF M KNV+SW T+I GYAQ + + A+ LF +M NV
Sbjct: 118 WTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV 177
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ +S AQ G +E + + + + + + A+I +K+G+I +A
Sbjct: 178 ----VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWT----AMIAGLSKNGRIDEARL 229
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M ++V++W MI G A + EALD+F RM R P+ T I + G
Sbjct: 230 LFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPE-RDLPSWNTMI---TGLIQNGD 285
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM----PFEANAAIW 247
+ R+ FN M + I GC+ + G +EA K+ RM + N +
Sbjct: 286 LRRARKLFNEMPKKNVISWTTMITGCV-----QEGESEEALKIFSRMLSTNGAKPNQGTF 340
Query: 248 GSLLAA-SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
S+L A SN+ G LGE H I + + ++S + + + E G RK+ D
Sbjct: 341 VSVLGACSNLAG---LGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDD 397
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 17/248 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ +K G + AR LF+ M E +VI+WTT+I+GY + EA LF R+ + K
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAK 112
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + A + + + E + N + N V N +ID YA++G+I A+ +
Sbjct: 113 KNVVTWTAMVGGYIRSNKISDAEKLFNEMP----NKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M ++V++W T+++ LA G EA +F RM V I++ A+++ G +
Sbjct: 169 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV----ISWTAMIAGLSKNGRI 224
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ R F+ M R + + MI + L EA L RMP E + W +++
Sbjct: 225 DEARLLFDRMPER-----NVVSWNAMITGYAQNLRLDEALDLFERMP-ERDLPSWNTMIT 278
Query: 253 ASNIYGDV 260
GD+
Sbjct: 279 GLIQNGDL 286
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 19/251 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W T+++GY K G + AR LF+ + +KNV++WT ++ GY + ++ ++A LF M +N
Sbjct: 86 WTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKN 145
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V ++ + AQ G ++ ++ E+ +V N ++ M A+ G+I +A
Sbjct: 146 V----VSWNTMIDGYAQNGRIDSAMYL---FEKMPERNVVSW-NTVMSMLAQCGRIEEAR 197
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + VI+WT MIAGL+ +G EA +F RM + N +++ A+++
Sbjct: 198 RLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMP----ERNVVSWNAMITGYAQNL 253
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ F M R + + MI L + G L+ A KL MP + N W ++
Sbjct: 254 RLDEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTM 307
Query: 251 LAASNIYGDVE 261
+ G+ E
Sbjct: 308 ITGCVQEGESE 318
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 206/332 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y K G +N A+ LF+ M K +ISW +++GYAQ + L+R M + V
Sbjct: 182 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 241
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++ LS+CA LGA +G + ++ G + LNNALI+MYA+ G + KA V
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +++++WT +I G +HG G A+ +F M R+ ++P+ F+ +LSAC H GL
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 361
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF +MK Y +EP E Y CM+DLLGRAG L+EA+ L+ MP + + A+WG+LL
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VEL E A + +I+LEP N G Y +LSNIY+ +IR +M++ +KK
Sbjct: 422 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 481
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCSY+E+ RVH F+ GD +H D +Y++L
Sbjct: 482 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 513
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 15 MVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y K ++NAR +FE + K + + L++GY + ++A+ LFR+M E V
Sbjct: 81 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +L + AC +ELG +H +YG ++ V + N I MY K G + A ++
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K +I+W M++G A +GL L+++ M+ V P+ +T + +LS+C ++G
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 193 ELGRRY-FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+G F + S + P + +I++ R G L +A+ + MP E W +++
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAII 317
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
++G E+ + +I+ +EP + +LS
Sbjct: 318 GGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 353
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W T + A+ Q +A++L+ +M +P+ AL +CA L LG H I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREA 160
+ G + LI MY K + A +VFE K + + +++G + +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ +F +M V N +T + ++ AC +ELG + +YG + + C I
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSVVNCFIT 186
Query: 221 LLGRAGYLQEAEKLLRRMPFEA----NAAIWG 248
+ + G + A+KL MP + NA + G
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 218
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 210/310 (67%), Gaps = 10/310 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+ G+ K G ++ AR +F++M EK+V SW+T+I+GYAQ + P+ A+ LF M V+
Sbjct: 566 NVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVE 625
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIGK 128
P+EI M++ SA A LG + G W H Y+ N ++PLN+ A+IDMYAK G I
Sbjct: 626 PNEITMVSVFSAIAALGKLPEGRWAHEYV----CNKVIPLNDNLSAAIIDMYAKCGSIDT 681
Query: 129 ALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
AL VF +K+K+ V W +I GLA+HG +L++FS ++R +K N ITF+ +LSAC
Sbjct: 682 ALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSAC 741
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
CH GLVE+G RYF MK+++G+EP I+ YGC++DLLGR G L+EAE+++R MP +A+ I
Sbjct: 742 CHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVI 801
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WG+LLA+S +G+VE+GE A ++L +L+P + +LSN+YA G W ++ +R+ ++
Sbjct: 802 WGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQS 861
Query: 307 MGVKKMPGCS 316
+ + PG S
Sbjct: 862 QRMIRSPGYS 871
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 33/283 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K G ++ AR LFE + E++V SW +I G+ QM + +A+ L+ M+ ++
Sbjct: 433 WNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDL 492
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-------NTIVPL------------ 112
P+E+ ++ LSAC Q ++E G H+ I + G TI+
Sbjct: 493 HPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYL 552
Query: 113 ------------NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+N +I + K+G I +A Q+F+ M K V +W+TMI+G A + L A
Sbjct: 553 QYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVA 612
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
LD+F M ++V+PNEIT +++ SA +G + GR + ++ I +ID
Sbjct: 613 LDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV-IPLNDNLSAAIID 671
Query: 221 LLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVEL 262
+ + G + A + R++ + + + W +++ ++G L
Sbjct: 672 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANL 714
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 74/362 (20%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M++GY K+ L NAR LF M E+ +S+TT+I G AQ D EAI +F+ M+ V
Sbjct: 302 NIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVA 361
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTI-------------------- 109
P+E+ M + +SAC+ +G + +H + + +GL I
Sbjct: 362 PNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRL 421
Query: 110 ---VPLNNA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+P+ N ++ Y KSG + +A ++FE + + V +W MI G R+AL
Sbjct: 422 FNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKAL 481
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK---------------SRY 206
++S M ++ + PNE+ + +LSAC +E GR++ +++ S Y
Sbjct: 482 LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFY 541
Query: 207 GIEPKIE----QY-----------GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+I+ QY MI + G + +A ++ MP E + W +++
Sbjct: 542 AACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFSWSTMI 600
Query: 252 AASNIYGDVELGECALQHL-----IKLEPHNSGNYAILSNIYAI----LGRWNESGKIRK 302
+ Y EL + AL K+EP+ ++ S I A+ GRW K
Sbjct: 601 SG---YAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNK 657
Query: 303 VM 304
V+
Sbjct: 658 VI 659
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 31/147 (21%)
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG---------- 124
E+++++AL CA A+ G+ IH + +YG N+ + N+LI+MY K G
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 125 ---------------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
++ A Q+F M + +++TTMI GLA + EA+++
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 164 FSRMERARVKPNEITFIAILSACCHVG 190
F M A V PNE+T +++SAC H+G
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIG 378
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 216/346 (62%), Gaps = 1/346 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +F + K+++SW T+I GY+Q PNEA+ LF MQ + K
Sbjct: 711 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFK 769
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I M L ACA L A++ G IH +I + G + + + AL+DMYAK G + A +
Sbjct: 770 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 829
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +I+WT MIAG +HG G EA+ F+ M A ++P+E +F IL+AC H GL+
Sbjct: 830 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLL 889
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++FN M++ G+EPK+E Y C++DLL R G L +A K + MP + + IWG LL+
Sbjct: 890 NEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 949
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DV+L E +H+ +LEP N+ Y +L+N+YA +W E K+RK M+ G K+
Sbjct: 950 GCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 1009
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 358
PGCS+IEV + + FVAG++ HP R+ +L K+ QM+ ++
Sbjct: 1010 PGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFS 1055
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 164/299 (54%), Gaps = 8/299 (2%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F NT++ Y+K G+LN A +F M + ++SWT+ IA Y + ++AI LF MQ +
Sbjct: 608 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG 667
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD + + + ACA +++ G +H+Y+ + G+ + +P+ NALI+MYAK G + +A
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K +++W TMI G + + L EAL++F M++ + KP++IT +L AC +
Sbjct: 728 LVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLA 786
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
++ GR + +I+ R G + ++D+ + G L A+ L +P + + W
Sbjct: 787 ALDKGREIHGHIL--RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTV 843
Query: 250 LLAASNI--YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
++A + +G+ + + +EP S +++++ N + G NE K MR+
Sbjct: 844 MIAGYGMHGFGNEAISTFNEMRIAGIEPDES-SFSVILNACSHSGLLNEGWKFFNSMRN 901
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++A Y K G + +A LF+ ++E +V+SW ++I G + +F +M + V+
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 568
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ L A A +G + LG +H + + + V +N L+DMY+K G + A +V
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 628
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + ++++WT+ IA GL +A+ +F M+ V+P+ T +I+ AC +
Sbjct: 629 FVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSL 688
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR + + + G+ + +I++ + G ++EA + ++P + + W +++
Sbjct: 689 DKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 746
Query: 253 A 253
Sbjct: 747 G 747
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y GDL R +F+ + V W L++ YA++ E+++LF++MQ V +
Sbjct: 410 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L A LG V+ + +H Y+ + G + + N+LI Y K G + A +F+
Sbjct: 470 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ V++W +MI G ++G L++F +M V+ + T +++L A ++G + L
Sbjct: 530 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSL 589
Query: 195 GRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR +K+ + E ++D+ + G L A ++ +M + W S +AA
Sbjct: 590 GRALHGFGVKACFSEEVVFSNT--LLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTIAA 646
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L CA+ ++E G+ +H+ I G++ L L+ MY G + + ++F+ + N
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV-ELGRRY 198
V W +++ A G RE++ +F +M++ V N TF +L +G V E R +
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++K +G + +I + G ++ A L + E + W S++ + G
Sbjct: 494 GYVLKLGFGSNTAV--VNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 550
Query: 259 DVELG-ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR--KVMRDMGVK 310
G E +Q LI G L+ + ++L W G + + + GVK
Sbjct: 551 FSGNGLEIFIQMLIL------GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVK 599
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 210/343 (61%), Gaps = 4/343 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M+ YA+ G ++ A LF M ++V+SW T++AGY + EA+ LFR+M +
Sbjct: 185 WNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSS 244
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V P+ M L ACA G +E G W+H YIE+ +N L+ LIDMY K G I
Sbjct: 245 CAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDN 304
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
ALQVFE + + + +WTT+I GLA+HG +AL MF M+ + P+++T + +L+AC
Sbjct: 305 ALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACA 364
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ G YF M++++ I PKIE YGCMIDLLGR G LQEA ++R MP + N IW
Sbjct: 365 HGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIW 424
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+ L+A ++G++ELG+ A + L +L+P + +LS++YA W + R+ M M
Sbjct: 425 GAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSM 484
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 350
VKK PGCS IE+ VHEFVAG + HP + + +L + Q
Sbjct: 485 QVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEAQ 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA +G ++AR LF+ M E+ ++ T + + Q +AI +F M + V
Sbjct: 50 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 109
Query: 73 PDEIAMLAALSACAQLGA----VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +A+ AL AC G+ G+ IH I G+ V ++ LI +Y + GK+
Sbjct: 110 PDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAV 169
Query: 129 ALQVFENMKNKSVITWTTMI-------------------------------AGLALHGLG 157
+ +VF++M ++S ITW M+ AG + G
Sbjct: 170 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRC 229
Query: 158 REALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIE 213
REAL +F +M V PN T IL AC G +E G + I ++R + ++
Sbjct: 230 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 289
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ C+ID+ + G + A ++ + P + + W +++ ++G
Sbjct: 290 R--CLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHG 332
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 211/308 (68%), Gaps = 1/308 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ M+ GYAKVGD+ +ARALF+ EK+V++W+ LI+GY++ +QPNEA+ +F M NV
Sbjct: 236 FTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNV 295
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKAL 130
KPDE M++ +SAC+QLG +L +W+ +Y+ Q ++T + ALIDM+AK G + KA+
Sbjct: 296 KPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAV 355
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F++M ++ +I ++I GL++HG G EA+++F+RM + P+ + F IL+AC G
Sbjct: 356 KLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGG 415
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E G +F+ MK++Y + P Y CM+DLL RAG L+ A LL+ MP + +A WG+L
Sbjct: 416 LIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGAL 475
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++GDVEL E L++LEP +G+Y +LSNIYA +W + +R M++ G++
Sbjct: 476 LGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIR 535
Query: 311 KMPGCSYI 318
K+PGCSYI
Sbjct: 536 KIPGCSYI 543
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++++ Y K ++ +AR +F+ + E+NV+SWT ++AGYA + A +F RM N+
Sbjct: 144 SSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNL- 202
Query: 73 PDEIAMLAALSACAQLGAVE--LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P AM++ L L E + + + +ID YAK G + A
Sbjct: 203 PSWNAMISGLGKAGDLSGARKVFDEMVERNVVSF---------TVMIDGYAKVGDMASAR 253
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ K V+ W+ +I+G + + EA+ +F M VKP+E ++++SAC +G
Sbjct: 254 ALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLG 313
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQY-GCMIDLLGRAGYLQEAEKLLRRMP 239
+L ++ + S+ I+ + +ID+ + G +++A KL + MP
Sbjct: 314 NSDLA-KWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMP 362
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACA 86
+ ++F + + + L+ +++ Q + +LF RM Q E D+ + C+
Sbjct: 57 STSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCS 116
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
++ GE +H + G++ V + ++LI Y K +I A +VF+ + ++V++WT
Sbjct: 117 NELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTA 176
Query: 147 MIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
M+AG A G A +F RM ER N ++ A++S G + R+ F+ M
Sbjct: 177 MVAGYASVGDLENAKRVFERMPER-----NLPSWNAMISGLGKAGDLSGARKVFDEM--- 228
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+E + + MID + G + A L P E + W +L++
Sbjct: 229 --VERNVVSFTVMIDGYAKVGDMASARALFDEAP-EKDVVAWSALIS 272
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 222/348 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +FR M + V
Sbjct: 216 WNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGV 275
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK G + A +
Sbjct: 276 RPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVARE 335
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L+ C GL
Sbjct: 336 VFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGL 395
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M + +WG++L
Sbjct: 396 VAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTIL 455
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+M G K
Sbjct: 456 SSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 59/254 (23%)
Query: 60 ITLFRRMQVENVKPDEIAMLAA------------LSACAQLGAVELGEWIHNYIEQYGLN 107
+TLF R + N P L A SAC+ LG+ +H + G
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGL---GREALD- 162
+ + NAL+ Y SG +G +VF+ + + + V+TW ++AG G+ RE D
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 163 ---------------------------MFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+F M V+PN+ + LSA +GL+E G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL----RRMPFEANAAIWGSLL 251
+ N+++ R G+ + ++D+ + G + A ++ RR F NA I G L
Sbjct: 299 KFVHNVVQ-RSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICG--L 355
Query: 252 AASNIYGD-VELGE 264
AA + D VEL E
Sbjct: 356 AAHGLGRDAVELFE 369
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 222/348 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +FR M + V
Sbjct: 216 WNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGV 275
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK G + A +
Sbjct: 276 RPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVARE 335
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L+ C GL
Sbjct: 336 VFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGL 395
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M + +WG++L
Sbjct: 396 VAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTIL 455
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+M G K
Sbjct: 456 SSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 59/254 (23%)
Query: 60 ITLFRRMQVENVKPDEIAMLAA------------LSACAQLGAVELGEWIHNYIEQYGLN 107
+TLF R + N P L A SAC+ LG+ +H + G
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGL---GREALD- 162
+ + NAL+ Y SG +G +VF+ + + + V+TW ++AG G+ RE D
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 163 ---------------------------MFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+F M V+PN+ + LSA +GL+E G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL----RRMPFEANAAIWGSLL 251
+ N+++ R G+ + ++D+ + G + A ++ RR F NA I G L
Sbjct: 299 KFVHNVVQ-RSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICG--L 355
Query: 252 AASNIYGD-VELGE 264
AA + D VEL E
Sbjct: 356 AAHGLGRDAVELFE 369
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 235/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVG--DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
NTM+ YAK G DL AR +F+ M E++V+SW ++IA YAQ EAI L+ +M
Sbjct: 91 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 149
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+K + +A+ A L ACA GA++ G+ IHN + + GL V + +++DMY+K G++
Sbjct: 150 GGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEM 209
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F +K K++++W+ MI G +HG G+EAL++F+ M+R+ ++PN ITFI++L+AC H
Sbjct: 210 ASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSH 269
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL++ GR ++N MK +GIE +E YGCM+DLLGRAG L EA L++ M + +AAIWG
Sbjct: 270 AGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWG 329
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +VEL E +++ L +L+ NSG Y +LSNIYA G W + +IR +++
Sbjct: 330 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRR 389
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG S E+ +++ F GD SHP +Y L K+ +M+ A ++ N S + + D
Sbjct: 390 IEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLD 449
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSA 84
+AR F+ + + N + T + +GY + + ++ LFR M + DE A L A SA
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--IGKALQVFENMKNKSVI 142
A++ + +H I + G + N ++D YAK G + A +VF+ M+ + V+
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVV 120
Query: 143 TWTTMIAGLALHGLGREALDMFSRMER--ARVKPNEITFIAILSACCHVGLVELGRRYFN 200
+W +MIA A +G+ EA+ ++S+M +K N + A+L AC H G ++ G+ N
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G+E + ++D+ + G ++ A + R++ E N W +++ ++G
Sbjct: 181 QV-VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK-EKNILSWSAMITGYGMHG 236
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 222/355 (62%), Gaps = 3/355 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ G A +F M +++V+SWT++I G+ D+ EAI LF M + V+
Sbjct: 135 NGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVE 194
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E +++ L ACA GAV +G + IE+ + + ALIDMYAK G IG A +V
Sbjct: 195 PNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKV 254
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + NK V WT MI+GLA HGL EA+ +F +ME ++P+E T A+LSAC + G
Sbjct: 255 FDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWF 314
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G YFN M +YGI+P I+ YGCM+DLL R G+L EAE+ +R+MP E + +W +L+
Sbjct: 315 SEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIW 374
Query: 253 ASNIYGDVELGECALQH--LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AS ++GD++ E ++ L+K++ + G+Y +L N+YA G+W++ K+R++M G+
Sbjct: 375 ASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLS 434
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
K PGCS IEV VHEF AGD+ H + +++Y L ++ ++K AE + S VL
Sbjct: 435 KPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLK-AEGYHPKLSEVL 488
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 5/222 (2%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPD 74
A + GDL A + ++ +N T+I Y+Q P +A+ LF M Q + +PD
Sbjct: 36 AALSPAGDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPD 95
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L +CA+L +G+ +H I + GL + ++N LI MY+ GK G+A +VF
Sbjct: 96 KFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFG 155
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+++ V++WT+MI G EA+ +F M V+PNE T +++L AC G V +
Sbjct: 156 KMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGM 215
Query: 195 GRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
GRR +++ R G+E + +ID+ + G + A K+
Sbjct: 216 GRRVQGVIEERKIGLEANVRT--ALIDMYAKCGSIGSARKVF 255
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 217/352 (61%), Gaps = 6/352 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T++ LL NT + + V + +F + K+++SW +IA Y P EA+ +
Sbjct: 1229 TMASLLPAVTNTCLDNVSFV------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDI 1282
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
F +M+ V PD I++ + L AC L A+ LG IH Y+ + L + L NALIDMYAK
Sbjct: 1283 FLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 1342
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + A +VF+ MK + V++WT+MI+ ++G GR+A+ +FSRM+ + P+ I F+++
Sbjct: 1343 CGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSV 1402
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
LSAC H GL++ GR YF +M I P+IE + CM+DLLGRAG + EA +++MP E
Sbjct: 1403 LSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 1462
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
N +WG+LL+A +Y ++ +G A L +L P SG Y +LSNIYA GRW + +R
Sbjct: 1463 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 1522
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+M+ G+KKMPG S E+ RVH F+AGD SHP ++Y+ L + G+MK A
Sbjct: 1523 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEA 1574
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y K G L A + + M ++V+SW +L+AG A+ Q ++A+ + + M++ +K
Sbjct: 1165 NGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLK 1224
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M + L A + N +D + ++
Sbjct: 1225 PDAGTMASLLPA---------------------------VTNTCLD------NVSFVKEM 1251
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + NKS+++W MIA + + EA+D+F +ME V P+ I+ ++L AC + +
Sbjct: 1252 FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSAL 1311
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGRR + R ++P + +ID+ + G L+ A ++ +M F + W S+++
Sbjct: 1312 LLGRRIHEYV-VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMIS 1369
Query: 253 ASNIYG 258
A + G
Sbjct: 1370 AYGMNG 1375
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 92/177 (51%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA G+ + R +F+ + +KNV+ + +I Y ++A+ +F+ M + PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L A + + +G IH + + GL+ V + N LI MY K G + +A +V +
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
M + V++W +++AG A +G +AL++ ME +KP+ T ++L A + L
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL 1242
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 208/334 (62%), Gaps = 1/334 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y + D+++AR F+ M EK + SW +I+GYAQ A+ LF++MQ NV+P+ + +
Sbjct: 367 YCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTI 426
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ALSACAQLGA+ LG+W+H I L V + ALIDMY K G I +A +F++M N
Sbjct: 427 SSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDN 486
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+V++W MI+G LHG G EAL ++ M A + P TF+++L AC H GLV+ G
Sbjct: 487 KNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTV 546
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIY 257
F M S YGI P IE CM+DLLGRAG L+EA +L+ P A IWG+LL A ++
Sbjct: 547 FRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVH 606
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
D +L + A Q L +LEP N+G Y +LSN+Y +++E+ +R+ + + K PGC+
Sbjct: 607 KDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTL 666
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
IE+ R H F+AGD +HP D +Y L K+ +M
Sbjct: 667 IEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKM 700
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 126/244 (51%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ YAK GD+ AR LF+ M +++++ LI+GY+ ++ LF+ + ++P
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++A + + G L +H ++ + GL+ P++ AL +Y + + A + F+
Sbjct: 322 SSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFD 381
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K++ +W MI+G A +GL A+ +F +M+ V+PN +T + LSAC +G + L
Sbjct: 382 AMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSL 441
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ I+ + +E + +ID+ + G + EA + M N W +++
Sbjct: 442 GKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNVMISGY 499
Query: 255 NIYG 258
++G
Sbjct: 500 GLHG 503
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 48/278 (17%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSA 84
N+AR +F+ + + + W TL+AG + +EA+ F RM +V+PD + + L A
Sbjct: 175 NDARKVFDAVPSPDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLASVLPA 230
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
A++ +G +H + E+ GL + LI +YAK G + A +F+ M+ ++T+
Sbjct: 231 AAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTY 290
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI-----------LSACCHVGLVE 193
+I+G +++G+ ++++F + ++P+ T +A+ L+ C H +V+
Sbjct: 291 NALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVK 350
Query: 194 LG------------------------RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
G RR F+ M E +E + MI + G +
Sbjct: 351 AGLDANAPVSTALTTLYCRFNDMDSARRAFDAMP-----EKTMESWNAMISGYAQNGLTE 405
Query: 230 EAEKLLRRMP---FEANAAIWGSLLAASNIYGDVELGE 264
A L ++M N S L+A G + LG+
Sbjct: 406 MAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK 443
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RV 172
+AL +Y + A +VF+ + + + W T++AGL+ G EAL+ F RM A V
Sbjct: 162 SALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSV 217
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ T ++L A V +G R + + G+ +I L + G ++ A
Sbjct: 218 RPDSTTLASVLPAAAEVANTTMG-RCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR 276
Query: 233 KLLRRM 238
L RM
Sbjct: 277 HLFDRM 282
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 222/348 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +FR M + V
Sbjct: 216 WNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGV 275
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK G + A +
Sbjct: 276 RPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVARE 335
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L+ C GL
Sbjct: 336 VFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGL 395
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M + +WG++L
Sbjct: 396 VAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTIL 455
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+M G K
Sbjct: 456 SSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 59/254 (23%)
Query: 60 ITLFRRMQVENVKPDEIAMLAA------------LSACAQLGAVELGEWIHNYIEQYGLN 107
+TLF R + N P L A SAC+ LG+ +H + G
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 108 TIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGL---GRE---- 159
+ + NAL+ Y SG +G +VF+ + + + V+TW ++AG G+ RE
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 160 ------------------------ALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
AL +F M V+PN+ + LSA +GL+E G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL----RRMPFEANAAIWGSLL 251
+ N+++ R G+ + ++D+ + G + A ++ RR F NA I G L
Sbjct: 299 KFVHNVVQ-RSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICG--L 355
Query: 252 AASNIYGD-VELGE 264
AA + D VEL E
Sbjct: 356 AAHGLGRDAVELFE 369
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 216/336 (64%), Gaps = 3/336 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V YAK GD++ A +FE M EK+VISWT+L+ GYAQ + E++ +F M+V V
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + + LSACA+L +E G+ +H + GL + N+L+ MYAK G + A +
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M+ K VITWT +I G A +G GR +L + M + +P+ ITFI +L AC H GLV
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 582
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR+YF M YGI+P E Y CMIDL GR+G L EA++LL +M + +A +W SLL+
Sbjct: 583 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++EL E A +L +LEP N+ Y +LSN+Y+ +WN+ KIRK+M+ G+ K
Sbjct: 643 ACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKE 702
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
PGCS++E++ RV+ F++ D HP R +I KI+
Sbjct: 703 PGCSWLEINSRVNTFISDDRGHP---REAEIYTKID 735
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 132/242 (54%), Gaps = 6/242 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK GDL NA+ + E M + +V+SW +L+ G+ + EA+ LF+ M N+K
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMK 363
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ + L+ C +G++ + +H I + G ++NAL+DMYAK+G + A V
Sbjct: 364 IDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTV 421
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M K VI+WT+++ G A + E+L +F M V P++ +ILSAC + L+
Sbjct: 422 FEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLL 481
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ + + +KS G+ Y ++ + + G L +A+ + M + + W +++
Sbjct: 482 EFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 538
Query: 252 AA 253
Sbjct: 539 VG 540
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 133/245 (54%), Gaps = 6/245 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM++ Y VG L AR LF+ + K+ I+W+++I+GY + EA LFR M++E
Sbjct: 99 WNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGW 158
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + + + L C+ LG ++ GE IH ++ + G V + L+DMYAK + +A
Sbjct: 159 KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEF 218
Query: 132 VFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F+ ++ K+ + WT M+ G A +G G +A++ F M V+ N+ TF IL+AC V
Sbjct: 219 LFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSV 278
Query: 190 GLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + I+KS +G ++ ++D+ + G L+ A+ +L M + + W
Sbjct: 279 LARCFGEQVHGFIVKSGFGSNVYVQS--ALVDMYAKCGDLKNAKNMLETME-DDDVVSWN 335
Query: 249 SLLAA 253
SL+
Sbjct: 336 SLMVG 340
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 6/241 (2%)
Query: 15 MVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK ++ A LF+ + KN + WT ++ GYAQ +A+ FR M + V+
Sbjct: 203 LVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVE 262
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++ L+AC+ + A GE +H +I + G + V + +AL+DMYAK G + A +
Sbjct: 263 CNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNM 322
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
E M++ V++W +++ G HGL EAL +F M +K ++ TF ++L+ CC VG +
Sbjct: 323 LETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN-CCVVGSI 381
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ I+K+ G E ++D+ + G + A + +M E + W SL+
Sbjct: 382 NPKSVHGLIIKT--GFENYKLVSNALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVT 438
Query: 253 A 253
Sbjct: 439 G 439
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N++VA YAK G L++A A+F M K+VI+WT +I GYAQ + ++ + M
Sbjct: 503 YNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGT 562
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKIG 127
+PD I + L AC+ G V+ G Y +Q YG+ +ID++ +SGK+
Sbjct: 563 RPDFITFIGLLFACSHAGLVDEGR---KYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLD 619
Query: 128 KALQVFENMKNKSVIT-WTTMIAGLALH 154
+A Q+ + M K T W ++++ +H
Sbjct: 620 EAKQLLDQMDVKPDATVWKSLLSACRVH 647
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 33/179 (18%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA----------------------- 149
N L++ +KSG++ A ++F+ M K +W TMI+
Sbjct: 68 TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127
Query: 150 --------GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 201
G G EA D+F M K ++ T ++L C +GL++ G
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGD 259
+ + G E + ++D+ + + EAE L + + F+ N +W +++ GD
Sbjct: 188 V-VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGD 245
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 222/344 (64%), Gaps = 7/344 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W +++ GYAK G+++ A LF +M +N +SW +I+G+ + EA+T F M ++
Sbjct: 247 WTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDR 306
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P+E ++ LSACA LGA++ G WIH YI++ G+ ++ ALIDMYAK G+I A
Sbjct: 307 VNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCAS 366
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF + + V+++T+MI+GL+ HGLG++AL +F +M V PNEIT + +L+ C H G
Sbjct: 367 RVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSG 426
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G M+S +GI PKIE YGC IDLLGRAGYL+ A ++++ MP E + IW +L
Sbjct: 427 LVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRAL 486
Query: 251 LAASNIYGDVELGECALQHL--IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
L+AS I+ +V LGE + H+ +K HN G +LSN+YA LGRW ++RK+M D
Sbjct: 487 LSASRIHHNVNLGEQIISHIGQLKSSDHNGGE-VLLSNLYASLGRWERVTEMRKLMVDRR 545
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+ PGCS+IEV+ VHEF D HP ++ +I K+N +K
Sbjct: 546 SESSPGCSWIEVNGLVHEFRVADQLHP---QIVEIRNKLNEILK 586
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKN--VISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
+++ Y + NAR LF+ + + W +I Y+++ E I LF RM +
Sbjct: 111 SLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDG 170
Query: 71 ---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
V PDE +++C+ ++ GE +H + + G + + + N++I+M + ++
Sbjct: 171 PMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARME 230
Query: 128 KALQVFENMKNKSVITWTTMIAGLALH-----------------------------GLGR 158
A +VF M + V +WT+++ G A H G GR
Sbjct: 231 DARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGR 290
Query: 159 --EALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
EAL F M RV PNE + +LSAC H+G ++ G + ++ + GI
Sbjct: 291 YPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQG-NWIHLYIDKIGIRQSSNIS 349
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 275
+ID+ + G + A ++ + + + + S+++ + +G LG+ AL+ ++
Sbjct: 350 TALIDMYAKCGRIDCASRVFNGI-CKRDVLSFTSMISGLSYHG---LGKDALRVFYQMLD 405
Query: 276 HNSGNYAILSNIYAILGRWN 295
N ++ N ILG N
Sbjct: 406 EN-----VMPNEITILGVLN 420
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 210/343 (61%), Gaps = 4/343 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M+ YA+ G ++ A +F M ++V+SW T++AGY + EA+ LFR+M +
Sbjct: 184 WNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSS 243
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V P+ M L ACA G +E G W+H YIE+ +N L+ LIDMY K G I
Sbjct: 244 CAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDN 303
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
ALQVFE + K + +WTT+I GLA+HG +AL MF M+ + P+++T + +L+AC
Sbjct: 304 ALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACA 363
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ G YF M++++ I PKIE YGCMIDLLGR G LQEA ++R MP + N IW
Sbjct: 364 HGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIW 423
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+ L+A ++G++ELG+ A + L +L+P + +LS++YA W + R+ M M
Sbjct: 424 GAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSM 483
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 350
VKK PGCS IE+ VHEFVAG + HP + + +L + Q
Sbjct: 484 QVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEAQ 526
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA +G ++AR LF+ M E+ ++ T + + Q +AI +F M + V
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 108
Query: 73 PDEIAMLAALSACAQLGA----VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +A+ AL AC G+ G+ IH + G+ V ++ LI +Y +SG++
Sbjct: 109 PDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPV 168
Query: 129 ALQVFENMKNKSVIT-------------------------------WTTMIAGLALHGLG 157
+ +VF++M ++S IT W T++AG + G
Sbjct: 169 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 158 REALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIE 213
REAL +F +M V PN T IL AC G +E G + I ++R + ++
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 288
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ C+ID+ + G + A ++ + P + + W +++ ++G
Sbjct: 289 R--CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHG 331
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 213/334 (63%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA LF+ M E ++ISWT ++ G+ + EA+ FR MQ+ V
Sbjct: 118 WNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGV 177
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A++AAL+AC LGA+ LG W+H Y+ V ++N+LID+Y + G + A +
Sbjct: 178 KPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARE 237
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ KPN +TF L+AC HVGL
Sbjct: 238 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGL 297
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+F MK Y I P+IE YGC++DL RAG L++A K+++ MP + N + GSLL
Sbjct: 298 VDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLL 357
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G + L E ++HL L + NY ILSN+YA +W + ++R+ M+ +G+K
Sbjct: 358 AACRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLK 417
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PG S IE+ H F+AGD++H + + ++L
Sbjct: 418 KQPGFSSIEIDDCTHVFMAGDSAHVETAYIREVL 451
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 42/253 (16%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + ++SWT+ I + EA F M++ V+P I +A LS C G+ L
Sbjct: 7 TSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETL 66
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--- 149
G+ +H Y + GL+ V + A++ MY+K G++ KA VF+ M +K+ +TW TMI
Sbjct: 67 GDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYM 126
Query: 150 ----------------------------GLALHGLGREALDMFSRMERARVKPNEITFIA 181
G G EAL F M+ + VKP+ + IA
Sbjct: 127 RSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIA 186
Query: 182 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC ++G + LG RY +M + ++ +IDL R G ++ A ++ +M
Sbjct: 187 ALNACTNLGALSLGLWVHRY--VMSQDFKNNVRVSN--SLIDLYCRCGCVEFAREVFDKM 242
Query: 239 PFEANAAIWGSLL 251
+ W S++
Sbjct: 243 E-KRTVVSWNSVI 254
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 226/358 (63%), Gaps = 1/358 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MVAGY K G + +AR +F+ M +N+ +W+ +I GYA+ + +AI LF M+ E V
Sbjct: 188 WTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGV 247
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E M++ +S+CA LGA+E GE H Y+ + + + L AL+DMY + G+I KA++
Sbjct: 248 VANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIR 307
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + +K ++W+++I GLA+HG +A+ FS+M R P +IT A+LSAC H GL
Sbjct: 308 VFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGL 367
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G + MK YGIEP++E YGC++D+LGRAG L EAE + +MP + NA I G+LL
Sbjct: 368 VDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALL 427
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A IY + E+ E LI+++P +SG Y +LSNIYA G+W + +R +M++ VKK
Sbjct: 428 GACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKK 487
Query: 312 MPGCSYIEVSKRVHEFVAGDTS-HPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
PG S IE+ ++++F GD HP+ ++ ++ +I G+++ + N + D
Sbjct: 488 PPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVD 545
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A +F + N+ + LI ++ +P++A + +M + PD I + A
Sbjct: 69 LGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
++ V +GE H+ I ++G V + N+L+ MYA G I A ++F M + V++W
Sbjct: 129 STEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSW 188
Query: 145 TTMIAGLALHGL---GRE----------------------------ALDMFSRMERARVK 173
T+M+AG G+ RE A+D+F M+R V
Sbjct: 189 TSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVV 248
Query: 174 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
NE ++++S+C H+G +E G R ++KS + + ++D+ R G +++A
Sbjct: 249 ANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGT--ALVDMYWRCGEIEKAI 306
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPHNSGNYAILS 285
++ +P + ++ W S++ ++G +++L P + A+LS
Sbjct: 307 RVFEELP-DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLS 360
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM---------YAKSGKIGKA 129
LA L +C+ +++ IH ++ + L + V + + L+ + + + +G A
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYA 72
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F ++N ++ + +I + +A +++M ++R+ P+ ITF ++ A +
Sbjct: 73 YGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEM 132
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
V +G + + + R+G + + ++ + G + A ++ +MPF + W S
Sbjct: 133 ECVVVGEQTHSQI-VRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFR-DVVSWTS 190
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG- 308
++A Y + E A + ++ N ++I+ N YA + ++ + ++M+ G
Sbjct: 191 MVAG---YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGV 247
Query: 309 -------VKKMPGCSY---IEVSKRVHEFV 328
V + C++ +E +R HE+V
Sbjct: 248 VANETVMVSVISSCAHLGALEFGERAHEYV 277
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 211/323 (65%), Gaps = 3/323 (0%)
Query: 1 MFTLSRLLYKF-WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
+F S L F WN+M++GY K G + +A+ALF +M +K+ +SW+ +IAG Q +Q +EA
Sbjct: 326 LFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEA 385
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+T+F M+ +KPDE+ +++ +SAC L A+E G+ +H YI QY N + L +LIDM
Sbjct: 386 LTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDM 445
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-PNEIT 178
Y K G + AL+VF+ ++ K W +I GLA++GL +LDMFS ME + + P+EIT
Sbjct: 446 YMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEIT 505
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F +LSAC H GLVE GR++F +M+++Y I P I YGCM+DLLGRAGY++EAE L++ M
Sbjct: 506 FTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSM 565
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P + WG+LL A + D E+GE + L+KL+PH+ G +LSNIYA G W
Sbjct: 566 PMSPDVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVK 625
Query: 299 KIRKVMRDMGVKKMPGCSYIEVS 321
+R M+ V K+ GCS +E S
Sbjct: 626 DLRGSMKQH-VAKVAGCSVVESS 647
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 33/270 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++MVA +A+ G + AR +F+ ++ +WT +I+ + + D EA+ +F M+ E
Sbjct: 207 SSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWP 266
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
DE M++ ++ACA+ ++ GE H + + GL + V + NALI MY+
Sbjct: 267 VDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRL 326
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
K+G++ A +F M +K ++W+ MIAG + EAL
Sbjct: 327 FDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEAL 386
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M +KP+E+T ++++SAC ++ +E G+ ++ +Y I +ID+
Sbjct: 387 TVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIR-QYQYNITIVLGTSLIDM 445
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G ++ A ++ M E W +++
Sbjct: 446 YMKCGCMEAALEVF-DMVEEKGTPCWNAVI 474
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
+ SRLL F + A L+++ LF L+ N + TLI + P+
Sbjct: 37 YAASRLLL-FTTSATAARLLPQPLHHSLQLFRLVRSPNAFTCNTLIRAALRQGLPHLCFP 95
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L+ M PD +ACA G G +H++ ++G + L NAL+ MY+
Sbjct: 96 LYASMPA---APDTYTHPLLAAACAARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYS 152
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G + A +VF+ ++W T++A G +A+ +F+RM R + +A
Sbjct: 153 ACGCVAGARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVGVFARMPE-RSAAAVSSMVA 211
Query: 182 ILSACCHVGLVELGRRYFNIMKSR 205
+ + G+VE R F+ + R
Sbjct: 212 LFA---RTGMVEEARGVFDGAEHR 232
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 48/244 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ G + AR +F+ + +SW T++A Y + +A+ +F RM
Sbjct: 145 NALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVGVFARM------ 198
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ A AA+S+ ++ ++A++G + +A V
Sbjct: 199 PERSA--AAVSS-------------------------------MVALFARTGMVEEARGV 225
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +++ TWT MI+ + L EAL +FS M +E +++++AC ++
Sbjct: 226 FDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVI 285
Query: 193 ELGRRYFNI-----MKSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ G + + SR ++ I Y +D++ +E L F N+ I
Sbjct: 286 QNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDH---FSWNSMI 342
Query: 247 WGSL 250
G L
Sbjct: 343 SGYL 346
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 214/340 (62%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ + GDL +A+ LF M +++++SW T+IAG+ Q + A F+ MQ +K
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I L+ACA A+ G +H I + + V + LI MY K G I A QV
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K+V +WT+MI G A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL+
Sbjct: 673 FHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +F MK + IEP++E YGCM+DL GRAG L EA + + +M E ++ +WG+LL
Sbjct: 733 EEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +VEL E A Q ++L+P+++G + ILSNIYA G W E K+RKVM D GV K
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IEV +VH F + D +HP + ++ L +++ +M+
Sbjct: 852 PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 157/275 (57%), Gaps = 4/275 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT++ YAK G+ +A+ +F+ M EK+V SW L+ GY Q EA L +M ++V
Sbjct: 148 WNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSV 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ ++ L+ACA V+ G ++N I + G +T + + ALI+M+ K G IG A +
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+N+ + ++TWT+MI GLA HG ++A ++F RME V+P+++ F+++L AC H
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G++ MK G + +I ++ + + G +++A ++ + N W +++
Sbjct: 328 LEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR-NVVSWTAMI 385
Query: 252 AASNIYGDVELGECALQHLIK--LEPHNSGNYAIL 284
A +G ++ +I+ +EP+ +IL
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 167/283 (59%), Gaps = 10/283 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+ K GD+ +A +F+ + +++++WT++I G A+ + +A LF+RM+ E V+PD++A
Sbjct: 256 HIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L AC A+E G+ +H +++ G +T + + A++ MY K G + AL+VF+ +K
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++V++WT MIAG A HG EA F++M + ++PN +TF++IL AC ++ G++
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 199 FN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ I+++ YG + ++ ++ + + G L++A ++ ++ + N W +++ A +
Sbjct: 436 QDHIIEAGYGSDDRVRT--ALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQH 492
Query: 258 GDVELGECALQHLIK--LEPHNSGNYAIL----SNIYAILGRW 294
+ Q L+K ++P++S +IL S+ LG+W
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKW 535
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 136/244 (55%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ YAK G L +A +FE ++++NV++W +I Y Q +Q + A+ F+ + E +KP+
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPN 513
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L+ C ++ELG+W+H I + GL + + ++NAL+ M+ G + A +F
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN 573
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+M + +++W T+IAG HG + A D F M+ + +KP++ITF +L+AC +
Sbjct: 574 DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE 633
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GRR ++ + + + +I + + G +++A ++ ++P + N W S++
Sbjct: 634 GRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGY 691
Query: 255 NIYG 258
+G
Sbjct: 692 AQHG 695
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
Q NEA+ + R+ +++ A L C + + GE I+N+I++ G+ + + N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
LI+MYAK G A Q+F++M+ K V +W ++ G HGL EA + +M + VKP
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
++ TF+++L+AC V+ GR +N++ + G + + +I++ + G + +A K+
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLI-LKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 235 LRRMPFEANAAIWGSLLAASNIYG 258
+P + W S++ +G
Sbjct: 269 FDNLPTR-DLVTWTSMITGLARHG 291
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 215/340 (63%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +F + K+++SW T+I GY+Q PNEA+ LF MQ + K
Sbjct: 436 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFK 494
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I M L ACA L A++ G IH +I + G + + + AL+DMYAK G + A +
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 554
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +I+WT MIAG +HG G EA+ F+ M A ++P+E +F AIL+AC H GL+
Sbjct: 555 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLL 614
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++FN M++ G+EPK+E Y C++DLL R G L +A K + MP + + IWG LL+
Sbjct: 615 NEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 674
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DV+L E +H+ +LEP N+ Y +L+N+YA +W E K+RK M+ G K+
Sbjct: 675 GCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 734
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV + + FVAG++ HP ++ +L K+ QM+
Sbjct: 735 PGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 163/299 (54%), Gaps = 8/299 (2%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F NT++ Y+K G+LN A +F M + ++SWT++IA Y + ++AI LF MQ +
Sbjct: 333 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD + + + ACA +++ G +H+Y+ + G+ + +P+ NALI+MYAK G + +A
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + K +++W TMI G + + L EAL++F M++ + KP++IT +L AC +
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLA 511
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
++ GR + +I+ R G + ++D+ + G L A+ L +P + + W
Sbjct: 512 ALDKGREIHGHIL--RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTV 568
Query: 250 LLAASNI--YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
++A + +G+ + + +EP S AIL N + G NE K MR+
Sbjct: 569 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL-NACSHSGLLNEGWKFFNSMRN 626
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++A Y K G + +A LF+ ++E +V+SW ++I G + +F +M + V+
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ L ACA +G + LG +H + + + V +N L+DMY+K G + A +V
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 353
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + ++++WT++IA GL +A+ +F M+ V+P+ T +I+ AC +
Sbjct: 354 FVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSL 413
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR + + + G+ + +I++ + G ++EA + ++P + + W +++
Sbjct: 414 DKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 471
Query: 253 A 253
Sbjct: 472 G 472
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y GDL R +F+ + V W L++ YA++ E+++LF++MQ V +
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L A LG V+ + +H Y+ + G + + N+LI Y K G + A +F+
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ V++W +MI G ++G L++F +M V+ + T +++L AC ++G + L
Sbjct: 255 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL 314
Query: 195 GRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR +K+ + E ++D+ + G L A ++ +M + W S++AA
Sbjct: 315 GRALHGFGVKACFSEEVVFSNT--LLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA 371
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L CA+ ++E G+ +H+ I G++ L L+ MY G + + ++F+ + N
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV-ELGRRY 198
V W +++ A G RE++ +F +M++ V N TF +L +G V E R +
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
++K +G + +I + G ++ A L + E + W S++ + G
Sbjct: 219 GYVLKLGFGSNTAV--VNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 275
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 218/353 (61%), Gaps = 6/353 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
TMV+GYAK + AR++F + +K+++SW LIAGY Q + EA+ LFR ++ E+V
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVC 387
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVPLNNALIDMYAKSGKI 126
P L+A A L +ELG H+++ ++G + + N+LIDMY K G +
Sbjct: 388 PTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSV 447
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+ L+VFENM K ++W TMI G A +G G EAL++F +M + KP+ +T I L AC
Sbjct: 448 EEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCAC 507
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLVE GRRYF M +G+ P + Y CM+DLLGRAG L+EA+ L+ MP + +A +
Sbjct: 508 SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W SLL+A ++ ++ LG+ + + +++P +SG Y +L+N+Y+ LGRW ++ +RK+MR
Sbjct: 568 WSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRR 627
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GV K PGCS+I++ VH F+ D HP +Y IL + M+ A ++ +
Sbjct: 628 RGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 125/228 (54%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N++++ + G ++ + LF LM EK+ SW ++IAG+AQ D+ EA+ F RM ++
Sbjct: 93 FNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDF 152
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ + + LSAC++L ++LG IH I + + V + + LID Y+K G +G A +
Sbjct: 153 VLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ K+V++W +I +G EAL+ F RM KP+E+T +++SAC +
Sbjct: 213 VFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAA 272
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ G + + + ++D+ + G + EA + RMP
Sbjct: 273 FKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 40/279 (14%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G + AR +F+ M EKNV+SW LI Y Q EA+ F RM KPDE+ +
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTL 260
Query: 79 LAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM- 136
+ +SACA L A + G IH ++ + L NAL+DMYAK G++ +A VF+ M
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Query: 137 ------------------------------KNKSVITWTTMIAGLALHGLGREALDMFSR 166
K K +++W +IAG +G EAL +F
Sbjct: 321 VRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRM 380
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRY----GIEPKIEQYGCMIDL 221
++R V P TF +L+A ++ +ELGR+ + +++K + G EP I +ID+
Sbjct: 381 LKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDM 440
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+ G ++E ++ M E + W +++ A N YG
Sbjct: 441 YMKCGSVEEGLRVFENM-VEKDHVSWNTMIIGYAQNGYG 478
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 35/204 (17%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L C +L + +H + Q V + N LID+Y K G + A +VF+ M ++V
Sbjct: 31 LDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNV 90
Query: 142 I-------------------------------TWTTMIAGLALHGLGREALDMFSRMERA 170
+W +MIAG A H EALD F RM R
Sbjct: 91 FSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRD 150
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
N+ +F + LSAC + ++LG + I KS+Y ++ + +ID + G +
Sbjct: 151 DFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLD--VFMGSGLIDFYSKCGLVG 208
Query: 230 EAEKLLRRMPFEANAAIWGSLLAA 253
A ++ M E N W L+
Sbjct: 209 CARRVFDGME-EKNVVSWNCLITC 231
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 223/357 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++AG + GD+ A +F+ M E++++SW T+I Q+ EAI LFR MQ + +
Sbjct: 401 WNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGI 460
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + M+ SAC LGA++L +W+ YIE+ ++ + L AL+DM+++ G A+
Sbjct: 461 PGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMH 520
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + V WT I +A+ G A+++F+ M +VKP+++ F+A+L+AC H G
Sbjct: 521 VFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGS 580
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+ F M+ +GI P I YGCM+DLLGRAG L+EA L++ MP E N +WGSLL
Sbjct: 581 VDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLL 640
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA + +VEL A + L +L P G + +LSNIYA G+W + ++R M++ GV+K
Sbjct: 641 AACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQK 700
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+PG S IEV +HEF +GD SH + + +L +IN ++ A ++ + + +L+ D
Sbjct: 701 VPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVD 757
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 141/251 (56%), Gaps = 2/251 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA+ G ++ R LF+ M E+NV+SWT+LI GY+ D EA++LF +M V+
Sbjct: 169 NSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVE 228
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + M+ +SACA+L +ELG+ + +YI + G+ + NAL+DMY K G I A Q+
Sbjct: 229 PNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQI 288
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ NK+++ + T+++ H + L + M + +P+++T ++ ++AC +G +
Sbjct: 289 FDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDL 348
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+G+ + R G+E +ID+ + G + A K+ MP W SL+A
Sbjct: 349 SVGKSSHAYVL-RNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIA 406
Query: 253 ASNIYGDVELG 263
GD+EL
Sbjct: 407 GLVRDGDMELA 417
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 37/307 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K GD+ AR +F+ KN++ + T+++ Y + ++ + + M + +
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ ML+ ++ACAQLG + +G+ H Y+ + GL ++NA+IDMY K GK A +V
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389
Query: 133 FENMKNKSVITWTTMIAGLALHG-------------------------------LGREAL 161
FE+M NK+V+TW ++IAGL G + EA+
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F M+ + + +T + I SAC ++G ++L + ++ + I ++ ++D+
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIE-KNDIHVDLQLGTALVDM 508
Query: 222 LGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 278
R G A + +RM A A G + N G +EL L+ K++P +
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQ--KVKPDDV 566
Query: 279 GNYAILS 285
A+L+
Sbjct: 567 VFVALLT 573
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 13 NTMVAGYAKVGDLNN---ARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
N ++A ++G L + AR F + ++ + LI GYA ++AI L+ +M
Sbjct: 63 NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
V + PD+ LSAC+++ A+ G +H + + GL + ++N+LI YA+ GK+
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
++F+ M ++V++WT++I G + L +EA+ +F +M A V+PN +T + ++SAC
Sbjct: 183 LGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACA 242
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ +ELG++ + + S G+E ++D+ + G + A ++
Sbjct: 243 KLKDLELGKKVCSYI-SELGMELSTIMVNALVDMYMKCGDICAARQIF 289
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 4/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV+GY K GDL AR +F M E+ ++SW+ +I + + +EA+ +F +M
Sbjct: 187 WNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGF 246
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI---VPLNNALIDMYAKSGKIGK 128
+PD + + + L ACA LGA+E G W+H +++ GL V L AL+DMY K G + +
Sbjct: 247 RPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDE 306
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A VF+ ++++ V+ W MI GLA++G G+ AL++F RM PNE TF+ +L AC H
Sbjct: 307 AWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTH 366
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V+ G+ F M +GIEP+ E YGC+ DLLGRAG L+EAE +L MP E +A+ WG
Sbjct: 367 TGRVDEGKEIFRSM-CDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWG 425
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L+++ ++ +V +GE + LI+LEP + G Y +L N+YA+ G W ++ +RK+M + G
Sbjct: 426 ALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERG 485
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
KK G S+IE + VHEF +GDT HP ++Y +L + +++ ++++ +++ D
Sbjct: 486 AKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMD 545
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 105/267 (39%), Gaps = 46/267 (17%)
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV- 141
+ C +L A L H ++G + N L+ +Y G + A +VF+ S+
Sbjct: 127 AVCDRLAAAGLA---HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLD 183
Query: 142 -ITWTTMIAGLA-------------------------------LHGLGREALDMFSRMER 169
+W TM++G G EAL MF +M
Sbjct: 184 AFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMG 243
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPK-IEQYGCMIDLLGRAGY 227
+P+ + ++L AC H+G +E GR +K+ G P + ++D+ + G
Sbjct: 244 NGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGC 303
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP----HNSGNYAI 283
+ EA + + + + +W +++ + G G+ AL+ ++ N + +
Sbjct: 304 MDEAWWVFDGVQSQ-DVVLWNAMIGGLAMNGH---GKRALELFRRMLDMGFVPNESTFVV 359
Query: 284 LSNIYAILGRWNESGKIRKVMRDMGVK 310
+ GR +E +I + M D G++
Sbjct: 360 VLCACTHTGRVDEGKEIFRSMCDHGIE 386
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/321 (44%), Positives = 209/321 (65%), Gaps = 2/321 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ YAK GDL +AR +F+ M ++VI+W +I+GYAQ +EAI+LF M+ + V
Sbjct: 257 SALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVT 316
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++I + A LSACA +GA++LG+ I Y Q G + + ALIDMYAK G + A +V
Sbjct: 317 ENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRV 376
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
F+ M K+ +W MI+ LA HG +EAL +F M E +PN+ITF+ +LSAC H G
Sbjct: 377 FKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAG 436
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV G R F++M + +G+ PKIE Y CM+DLL RAG+L EA L+ +MP + + G+L
Sbjct: 437 LVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGAL 496
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +V++GE ++ +++++P NSGNY I S IYA L W +S ++R +MR G+
Sbjct: 497 LGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGIT 556
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS+IEV +HEF AGD
Sbjct: 557 KTPGCSWIEVENHLHEFHAGD 577
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 151/247 (61%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
++++ Y++ G + AR +F+ + ++++SW ++IAGYA+ EA+ +F M + +
Sbjct: 155 HSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGF 214
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+++++ L AC +LG +ELG W+ ++ + G+ + +ALI MYAK G +G A +
Sbjct: 215 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARR 274
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M + VITW +I+G A +G+ EA+ +F M+ V N+IT A+LSAC +G
Sbjct: 275 IFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGA 334
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG++ + S+ G + I +ID+ + G L A+++ + MP + N A W +++
Sbjct: 335 LDLGKQ-IDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP-QKNEASWNAMI 392
Query: 252 AASNIYG 258
+A +G
Sbjct: 393 SALASHG 399
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
A+TLF RM ++ P+ +CA L + H+ + + L++ ++LI
Sbjct: 100 ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLIT 159
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEI 177
MY++ G++ A +VF+ + + +++W +MIAG A G REA+++F M R +P+E+
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM 219
Query: 178 TFIAILSACCHVGLVELGR 196
+ +++L AC +G +ELGR
Sbjct: 220 SLVSVLGACGELGDLELGR 238
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 210/343 (61%), Gaps = 4/343 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M+ YA+ G ++ A +F M ++V+SW T++AGY + EA+ LFR+M +
Sbjct: 184 WNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSS 243
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V P+ M L ACA G +E G W+H YIE+ +N L+ LIDMY K G I
Sbjct: 244 CAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDN 303
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
ALQVFE + K + +WTT+I GLA+HG +AL MF M+ + P+++T + +L+AC
Sbjct: 304 ALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACA 363
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ G YF M++++ I PKIE YGCMIDLLGR G LQEA ++R MP + N IW
Sbjct: 364 HGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIW 423
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+ L+A ++G++ELG+ A + L +L+P + +LS++YA W + R+ M M
Sbjct: 424 GAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSM 483
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 350
VKK PGCS IE+ VHEFVAG + HP + + +L + Q
Sbjct: 484 QVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEAQ 526
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA +G ++AR LF+ M E+ ++ T + + Q +AI +F M + V
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 108
Query: 73 PDEIAMLAALSACAQLGA----VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +A+ AL AC G+ G+ IH + G+ V ++ LI +Y +SG++
Sbjct: 109 PDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPV 168
Query: 129 ALQVFENMKNKSVIT-------------------------------WTTMIAGLALHGLG 157
+ +VF++M ++S IT W T++AG + G
Sbjct: 169 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 158 REALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIE 213
REAL +F +M V PN T IL AC G +E G + I ++R + ++
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 288
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ C+ID+ + G + A ++ + P + + W +++ ++G
Sbjct: 289 R--CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHG 331
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 217/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY + A ++F M E+NV++WT +I+G AQ E + LF +M+ E +
Sbjct: 360 WNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGL 419
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A A++AC+ LG+++ G+ IH+ + + G ++ + NALI MY++ G + A
Sbjct: 420 EPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAES 479
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++W MIA LA HG G +A+++F +M + + P+ ITF+ IL+AC H GL
Sbjct: 480 VFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGL 539
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GR YF+ M +RYGI P + Y +IDLL RAG +A+ +++ MPFEA A IW +LL
Sbjct: 540 IKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALL 599
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G++ELG A L++L P G Y ILSN+YA LG+W+E ++R +MR+ GVKK
Sbjct: 600 AGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKK 659
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS++EV VH F+ D HP+ +Y L ++ +MK
Sbjct: 660 EPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMK 700
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 41/286 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+AGY + DL AR L + +T ++W +I+GY + EA FRRM +
Sbjct: 220 WTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGI 279
Query: 72 KPDEIAMLAALSACA----QLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAK- 122
+ DE + +SAC ++G G +H YI + + ++ +NNALI Y K
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339
Query: 123 ------------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLA 152
+ +I +A +F M ++V+TWT MI+GLA
Sbjct: 340 DRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G G E L +F++M+ ++P + F ++AC +G ++ G++ + + R G + +
Sbjct: 400 QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQV-IRLGHDSGL 458
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+I + R G ++ AE + MP+ ++ W +++AA +G
Sbjct: 459 SAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHG 503
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 55/293 (18%)
Query: 13 NTMVAGYAKVGDLNNARALFEL--MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T+++ Y+ G++ A+ LF +T ++ +S+ +I Y+ + + A+ LF +M+
Sbjct: 75 TTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYG 134
Query: 71 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMY--------A 121
PD + LSA + + E + +H + + G I + NAL+ Y
Sbjct: 135 FLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLV 194
Query: 122 KSGKI-GKALQVFENMKNKSVI--TWTTMIAGLALH------------------------ 154
KS ++ A +VF+ + +WTTMIAG +
Sbjct: 195 KSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAM 254
Query: 155 -------GLGREALDMFSRMERARVKPNEITFIAILSAC--CH--VGLVELGRRYFNIMK 203
GL EA D F RM ++ +E T+ +++SAC C+ +G+ GR+ +
Sbjct: 255 ISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYIL 314
Query: 204 SRYGIEPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R +EP + +I + + EA ++ +MP + W ++L+
Sbjct: 315 -RTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLS 365
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M+AG+A+ GD++ A LF LM +NV+SWTT+I+GY++ + EA+ LF RM+ E
Sbjct: 152 WNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKG 211
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+ + + + A A LGA+E+G+ + Y + G + ++NA+++MYAK GKI A
Sbjct: 212 MMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAW 271
Query: 131 QVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF + + +++ +W +MI GLA+HG + L ++ +M P+++TF+ +L AC H
Sbjct: 272 KVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHG 331
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+VE GR F M + + I PK+E YGCM+DLLGRAG L+EA ++++RMP + ++ IWG+
Sbjct: 332 GMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGA 391
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + + +VEL E A + L LEP N GNY ILSNIYA G+W+ K+RKVM+ +
Sbjct: 392 LLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKI 451
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K G S+IE ++H+F+ D SHP+ + ++ +L
Sbjct: 452 TKSAGHSFIEEGGQLHKFIVEDRSHPESNEIFALL 486
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEIAML 79
++ +L+ A + + + + LI Y+ Q ++ +L+ +M + + P++
Sbjct: 28 EIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFN 87
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY------------------- 120
SAC L + LG+ +H + + G + AL+DMY
Sbjct: 88 FLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVR 147
Query: 121 ------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
A+ G + AL++F M +++V++WTTMI+G + EAL +F RME
Sbjct: 148 GVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRME 207
Query: 169 RAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ + + PN +T +I A ++G +E+G+R + G + ++++ + G
Sbjct: 208 QEKGMMPNAVTLASIFPAFANLGALEIGQR-VEAYARKNGFFKNLYVSNAVLEMYAKCGK 266
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ A K+ + N W S++ ++G+
Sbjct: 267 IDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGE 298
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH Y + G++ LI+ + + A +V + ++ + +I + H
Sbjct: 7 IHGYTLRNGIDQ----TKILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQ 62
Query: 157 GR-EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQ 214
+ + ++S+M PN+ TF + SAC + LG+ + + +KS G EP +
Sbjct: 63 HQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKS--GFEPDLFA 120
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
++D+ + G L+ A KL +MP W +++A +GD+++
Sbjct: 121 ATALLDMYTKVGTLELARKLFDQMPVRG-VPTWNAMMAGHARFGDMDVA 168
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 206/325 (63%), Gaps = 5/325 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN+MV GY + G++ A LF M +N+I+W ++I G Q E++ +F MQ
Sbjct: 198 WNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSG 257
Query: 69 -ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ VKPD+I + + LSACA LG+++ G+W+H Y+ + + V + AL++MY K G +
Sbjct: 258 DDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQ 317
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+A+++F +M K WT MI+ ALHG G++A D F ME+A VKPN +TF+ +LSAC
Sbjct: 318 QAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACS 377
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLVE GR F++MK Y IEP+I Y CM+D+L RA EA L+R MP + + +W
Sbjct: 378 HSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVW 437
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LL ++G+++LGE +LI LEPHN Y L +IY G+++ + +IR M++
Sbjct: 438 GALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKER 497
Query: 308 GVK-KMPGCSYIEVSKRVHEFVAGD 331
G++ K+PGCS IE++ V EF G+
Sbjct: 498 GIETKIPGCSIIEINGVVQEFSVGE 522
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 145/317 (45%), Gaps = 57/317 (17%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM---DQPN- 57
+ +RLLY ++ N A +F ++ + + +I Y + D N
Sbjct: 55 YLFTRLLY------FCSFSNYASFNYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNC 108
Query: 58 --EAITLFRRMQVENVKPDEIAMLAALSACAQL---GAVELGEWIHNYIEQYGLNTIVPL 112
+A+ L+++M + + P+ + + C++L G V GE IH ++ ++G V +
Sbjct: 109 CYKALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTV--GEVIHAHVLKFGFLNDVFV 166
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM------------------------- 147
N+LI ++ G A +VF+ M + V++W +M
Sbjct: 167 GNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNI 226
Query: 148 ------IAGLALHGLGREALDMFSRMERAR----VKPNEITFIAILSACCHVGLVELGRR 197
I GL G +E+L++F M+ VKP++IT ++LSAC +G ++ G +
Sbjct: 227 ITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHG-K 285
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + + IE + ++++ G+ G +Q+A ++ MP E +A+ W ++++ ++
Sbjct: 286 WVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP-EKDASAWTAMISVFALH 344
Query: 258 GDVELGECALQHLIKLE 274
G G+ A +++E
Sbjct: 345 G---FGKKAFDCFLEME 358
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 211/318 (66%), Gaps = 11/318 (3%)
Query: 8 LYKF-----WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
+YK+ WN M++ YA+VGDL +AR LF+ M +++ +SW ++IAGY Q + +AI L
Sbjct: 331 VYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKL 390
Query: 63 FRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
F M E+ KPDE+ M++ SAC LG + LG W + +++ + + + N+LI MY+
Sbjct: 391 FEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYS 450
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
+ G + A+ +F+ M + ++++ T+I+G A HG G E++++ +M+ ++P+ IT+IA
Sbjct: 451 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIA 510
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
IL+AC H GL+ G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E
Sbjct: 511 ILTACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPME 565
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
+A I+GSLL A++I+ VELGE A L K+EPHNSGNY +LSNIYA GRW + K+R
Sbjct: 566 PHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVR 625
Query: 302 KVMRDMGVKKMPGCSYIE 319
MR GVKK G S++E
Sbjct: 626 DTMRKQGVKKTTGLSWLE 643
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 40/265 (15%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
W TM+ G+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M N
Sbjct: 203 WTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 262
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWI--------------------------------- 97
V+PDE + +S+C+ LG L E I
Sbjct: 263 VQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAA 322
Query: 98 HNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
H EQ G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG +
Sbjct: 323 HKIFEQLGVYKYRSSVPW-NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQN 381
Query: 155 GLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
G +A+ +F M KP+E+T +++ SAC H+G + LG +I+K + I+ I
Sbjct: 382 GESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-IQISIS 440
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRM 238
Y +I + R G +Q+A + + M
Sbjct: 441 VYNSLISMYSRCGSMQDAVLIFQEM 465
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 42/266 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR LF+ M ++ V W +I+GY + EA TLF M + +
Sbjct: 138 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 197
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ I W +I +AK G + A
Sbjct: 198 RNVIT------------------W-----------------TTMITGHAKKGNLKTARMY 222
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M +SV++W M++G A G E + +F+ M V+P+E T++ ++S+C +G
Sbjct: 223 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD 282
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAI-WGS 249
L + G P ++D+ + G L+ A K+ ++ ++ +++ W +
Sbjct: 283 PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 342
Query: 250 LLAASNIYGDVELGECALQHLIKLEP 275
+++A GD+ + +HL P
Sbjct: 343 MISAYARVGDLP----SARHLFDKMP 364
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 123/290 (42%), Gaps = 23/290 (7%)
Query: 31 LFELMTEKNVISWTTLIAGYAQMD-QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQL 88
+F T +V +T ++ Y+Q+ + ++LF+ M N+KP+ + +
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSE 117
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
+ L ++ + G + + N ++ +YAK G I A ++F+ M +++V W MI
Sbjct: 118 SMLFLA-----HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+G G EA +F M + N IT+ +++ G ++ R YF+ M R
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--- 229
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA----AIWGSLLAASNIYGDVELGE 264
+ + M+ + G +E +L M N W +++++ + GD L E
Sbjct: 230 --SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE 287
Query: 265 CALQHL---IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
++ L + P NY + + + + + K+ +GV K
Sbjct: 288 SIVRKLDDTVGFRP----NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 333
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 212/341 (62%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N MV+ + G N+A+ LF+ M ++N W +++AGYA E+ F M +++
Sbjct: 650 NVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQ 131
D + M+ ++ C+ L A+E G+ +H+ I + G +N V L AL+DMY+K G I KA
Sbjct: 710 YDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKART 769
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+NM K++++W MI+G + HG +EAL ++ M + + PNE+TF+AILSAC H GL
Sbjct: 770 VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGL 829
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G R F M+ Y IE K E Y CM+DLLGRAG L++A++ + +MP E + WG+LL
Sbjct: 830 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ D+++G A Q L +L+P N G Y I+SNIYA GRW E IR++M+ GVKK
Sbjct: 890 GACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKK 949
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+IE++ + F AG +HP + +Y L + Q K
Sbjct: 950 DPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSK 990
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 154/323 (47%), Gaps = 39/323 (12%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y++ G LN A+ +F M E+N SW ++I GY Q + EA+ LF++MQ+ +KPD
Sbjct: 520 LVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPD 579
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYI-----EQYGL----------------------- 106
++ + LS+C L + G +HN+I E+ G+
Sbjct: 580 CFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYD 639
Query: 107 NTI---VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 163
TI V LNN ++ + SG+ A +F+ M+ ++ W +++AG A GL +E+ +
Sbjct: 640 QTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNH 699
Query: 164 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
F M + ++ + +T + I++ C + +E G + +++ + + + ++D+
Sbjct: 700 FLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYS 759
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP-HNSGNYA 282
+ G + +A + M + N W ++++ + +G C+ + LI E G Y
Sbjct: 760 KCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG------CSKEALILYEEMPKKGMYP 812
Query: 283 ILSNIYAILGRWNESGKIRKVMR 305
AIL + +G + + +R
Sbjct: 813 NEVTFLAILSACSHTGLVEEGLR 835
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 129/250 (51%), Gaps = 3/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK D + +F+ M E+N ++W ++I+ AQ N+A+ LF RMQ K
Sbjct: 315 NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK 374
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + + L A A L + G +H ++ + LN+ + L +AL+DMY+K G + +A QV
Sbjct: 375 SNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQV 434
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
F ++ ++ +++ ++AG G EAL+++ M+ ++P++ TF +L+ C +
Sbjct: 435 FRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRN 494
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
GR+ + R I I ++ + G L A+++ RM E NA W S++
Sbjct: 495 DNQGRQ-IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMI 552
Query: 252 AASNIYGDVE 261
G+ +
Sbjct: 553 EGYQQNGETQ 562
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V GYA+ G +++A + + +V++W +IAGY ++ EA +F RM V PD
Sbjct: 216 LVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPD 275
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+AL C L + + G+ +H+ + G + NALIDMYAK L+VF+
Sbjct: 276 NFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD 335
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M ++ +TW ++I+ A G +AL +F RM+ + K N +IL A GL ++
Sbjct: 336 EMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS--AGLADI 393
Query: 195 GR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G+ R + R + I ++D+ + G ++EA ++ R + E N + +LLA
Sbjct: 394 GKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAG 452
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
+ +V Y+K G + A +F + E+N +S+ L+AGY Q + EA+ L+ MQ E+ +
Sbjct: 416 SALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGI 475
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+ L+ CA G IH ++ + + + + L+ MY++ G++ A +
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 535
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++ +W +MI G +G +EAL +F +M+ +KP+ + ++LS+C +
Sbjct: 536 IFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSD 595
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+ GR N + E I Q ++D+ + G + A K+
Sbjct: 596 SQKGRELHNFIVRNTMEEEGILQV-VLVDMYAKCGSMDYAWKV 637
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 19 YAKVG---DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 75
YA+ G DL AR LFE M E+N+ +W T+I YA++D E + L+ RM+ D+
Sbjct: 116 YARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDK 175
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
+ + AC + + + + + + GLN + + AL+D YA+ G + A+ +
Sbjct: 176 FTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDE 235
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
++ SV+TW +IAG EA +F RM + V P+ TF + L C + + G
Sbjct: 236 IEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 295
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
++ + + + G + +ID+ + + K+ M E N W S+++A
Sbjct: 296 KQVHSKLIA-CGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG-ERNQVTWNSIISAEA 353
Query: 256 IYG 258
+G
Sbjct: 354 QFG 356
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 44 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 103
TT+ + D P T +V P + L + C + + G+ IH +
Sbjct: 44 TTIKLKFNGPDSPKP--TSIHTKPASDVNPLPYSSL--IQDCIDSNSFQRGKSIHTQMIS 99
Query: 104 YGLNTIVPLNNALIDMYAKSGKIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
G N L ++ +YA+SG + A ++FE M +++ W TMI A E
Sbjct: 100 NGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEV 159
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMI 219
L ++ RM + ++ TF +++ AC + + ++G R + G+ + G ++
Sbjct: 160 LRLYGRMRGSGNFSDKFTFPSVIKAC--IAMEDMGGVRQLQSSVVKAGLNCNLFVGGALV 217
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
D R G++ +A L + + W +++A
Sbjct: 218 DGYARFGWMDDAVTSLDEIE-GTSVVTWNAVIAG 250
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 216/341 (63%), Gaps = 6/341 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ +AK+G+ +A ++F+ M + I W ++I G+AQ + + A+ LF+RM+
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++ + + L AC L +ELG H +I +Y + I LNNAL+DMY K G + AL+V
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRV 315
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK + VITW+TMI+GLA +G +EAL +F RM+ + KPN IT + +L AC H GL+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF MK YGI+P E YGCMIDLLG+AG L +A KLL M E +A W +LL
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + ++ L E A + +I L+P ++G Y +LSNIYA +W+ +IR MRD G+KK
Sbjct: 436 ACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDF----DRLYQILCKING 349
PGCS+IEV+K++H F+ GD SHP +L Q++ ++ G
Sbjct: 496 PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K LN+A LF+ M ++NVISWTT+I+ Y++ +A+ L M +NV+
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L +C + V + +H I + GL + V + +ALID++AK G+ AL V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M I W ++I G A + AL++F RM+RA + T ++L AC + L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 193 ELGR---------------------------------RYFNIMKSRYGIEPKIEQYGCMI 219
ELG R FN MK R + + MI
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-----DVITWSTMI 331
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANA----AIWGSLLAASN 255
L + GY QEA KL RM I G L A S+
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 111
Q D P A+ +Q + D + C AV G I ++ G ++
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L N LI+MY K + A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+PN T+ ++L +C G+ ++ + I+K G+E + +ID+ + G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDA 213
Query: 232 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
+ M +A +W S++ A N DV L
Sbjct: 214 LSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 219/322 (68%), Gaps = 2/322 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN+++AGYA+ G + A LF M +NVISWT LI+GYAQ + +A+ +F ++ E
Sbjct: 151 WNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKG 210
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KP+E+++ + L AC+QLGA+++G+ I Y G ++NA+++++A+ G I +A
Sbjct: 211 TKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQ 270
Query: 131 QVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF+ + +K ++ +W TMI GLA+HG +AL ++ +M +++P+++TF+ +L AC H
Sbjct: 271 QVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHG 330
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V GR+ F M+S++ + PK+E YGC++DLLGRAG LQEA L++ MP ++ IWG+
Sbjct: 331 GMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGT 390
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VELGE A + L KLEP N GNY ILSNIYA+ G W+ ++RK+M+ +
Sbjct: 391 LLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHI 450
Query: 310 KKMPGCSYIEVSKRVHEFVAGD 331
K G SYIEV +HEF+ D
Sbjct: 451 TKRAGYSYIEVGDGIHEFIVED 472
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 33/270 (12%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 80
++ DL A LF+ + + +V + I ++ + P+ L+ +M + P++ +
Sbjct: 28 QLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTF 87
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------------ 122
ACA L V G+ +H++ + G + + AL+DMYAK
Sbjct: 88 LFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRD 147
Query: 123 -------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
SG + AL++F M ++VI+WT +I+G A +G +AL+MF +E
Sbjct: 148 IPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLEN 207
Query: 170 AR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ KPNE++ ++L AC +G +++G+R ++ G +++L R G +
Sbjct: 208 EKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNN-GFFKNAYVSNAVLELHARCGNI 266
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+EA+++ + + N W +++ ++G
Sbjct: 267 EEAQQVFDEIGSKRNLCSWNTMIMGLAVHG 296
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 27/246 (10%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH Y + GL+ LI+ + + A +F+ + SV + I + G
Sbjct: 7 IHAYSLRNGLDH----TKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGH 62
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 215
++ +M PN+ +F + AC + V G+ + + KS G +
Sbjct: 63 PHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS--GFASDMFAM 120
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 275
++D+ + G L+ A +L MP + W SL+A G + E AL+ K+
Sbjct: 121 TALLDMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHM---EAALELFNKMPV 176
Query: 276 HNSGNYAILSNIYAILGRW-----------NESGKIRKVMRDMGVKKMPGCSY---IEVS 321
N ++ L + YA G++ NE G + V +P CS +++
Sbjct: 177 RNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV--LPACSQLGALDIG 234
Query: 322 KRVHEF 327
KR+ +
Sbjct: 235 KRIEAY 240
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 214/348 (61%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y K ++A+ +F+ M +NV++WT LIAGY Q ++ + +F M +V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + LSACA +GA+ G +H Y+ + + LID+Y K G + +A+ V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K+V TWT MI G A HG R+A D+F M + V PNE+TF+A+LSAC H GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GRR F MK R+ +E K + Y CM+DL GR G L+EA+ L+ RMP E +WG+L
Sbjct: 424 EEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ ++ D ELG+ A +IKL+P +SG Y +L+N+Y+ W+E ++RK M+D V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKINGQMKFAEHLQN 359
PG S+IEV ++ EF+A D P + D LY+ L + QM+ + L++
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELED 591
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++GY+ G + A LF+ +K+V++WT +I G+ + +EA+ F M+ V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E+ +++ L A ++ V G +H Y+E + V + ++L+DMY K A +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++V+TWT +IAG + + +F M ++ V PNE T ++LSAC HVG
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GRR M + IE +IDL + G L+EA + R+ E N W +++
Sbjct: 322 LHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMI 379
Query: 252 AASNIYG 258
+G
Sbjct: 380 NGFAAHG 386
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL--FRRMQVENVKPDEIAMLAALSAC 85
AR L + ++ W +LI ++ N ++ +R M+ V P L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+L ++ H +I ++GL++ + N+LI Y+ SG A ++F+ ++K V+TWT
Sbjct: 115 FKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
MI G +G EA+ F M++ V NE+T +++L A V V GR +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + ++D+ G+ +A+K+ MP N W +L+A
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAG 280
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 216/341 (63%), Gaps = 6/341 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ +AK+G+ +A ++F+ M + I W ++I G+AQ + + A+ LF+RM+
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++ + + L AC L +ELG H +I +Y + I LNNAL+DMY K G + AL+V
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRV 315
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK + VITW+TMI+GLA +G +EAL +F RM+ + KPN IT + +L AC H GL+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF MK YGI+P E YGCMIDLLG+AG L +A KLL M E +A W +LL
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + ++ L E A + +I L+P ++G Y +LSNIYA +W+ +IR MRD G+KK
Sbjct: 436 ACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDF----DRLYQILCKING 349
PGCS+IEV+K++H F+ GD SHP +L Q++ ++ G
Sbjct: 496 PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K LN+A LF+ M ++NVISWTT+I+ Y++ +A+ L M +NV+
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L +C + V + +H I + GL + V + +ALID++AK G+ AL V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M I W ++I G A + AL++F RM+RA + T ++L AC + L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 193 ELGR---------------------------------RYFNIMKSRYGIEPKIEQYGCMI 219
ELG R FN MK R + + MI
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-----DVITWSTMI 331
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANA----AIWGSLLAASN 255
L + GY QEA KL RM I G L A S+
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 111
Q D P A+ +Q + D + C AV G I ++ G ++
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L N LI+MY K + A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+PN T+ ++L +C G+ ++ + I+K G+E + +ID+ + G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDA 213
Query: 232 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
+ M +A +W S++ A N DV L
Sbjct: 214 LSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 206/342 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ GD A + FE M ++++SW + A YAQ EA+ LFR+MQ+E VK
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVK 736
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ L+ V G+ H + GL++ V + L+ +YAK GK+ +A+ +
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSL 796
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +V+ +I LA HG EA+ MF +M++ V+P+ T ++I+SAC H G+V
Sbjct: 797 FRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMV 856
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G F MK +GI P +E Y C +DLLGRAG L+ AE+++R+MPFE N +W SLL
Sbjct: 857 EEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ GD ELGE Q +++L+PHNS + +LSNIY G+W ++ RK M D VK
Sbjct: 917 TCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNA 976
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S+ E+ K+VHEFVAGD SHP D +Y +L K+ M+ A
Sbjct: 977 PGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRA 1018
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ + + +L AR++F M +V+SWT +++ A+ E LFRRMQ+E V
Sbjct: 576 TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVI 635
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L C + LG+ IH + + GL + + NAL++MY+ G +AL
Sbjct: 636 PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE MK + +++W M A A GL +EA+ +F +M+ VKP+++TF L+ LV
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
G + F+ + + G++ + ++ L + G L EA L R
Sbjct: 756 SDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFR 798
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 131/248 (52%), Gaps = 8/248 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT---EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
N ++ Y K GD A ++F+ M E +++SW +I+ + + +A+ +FRR+++E
Sbjct: 269 NALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Query: 70 NVKPDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++P+ + ++ L+A A G V+ G H I + G V + NA+I MYAK G
Sbjct: 329 GMRPNSVTLITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFS 387
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VF ++ K VI+W TM+ + ++ F M A + PN+++FIAIL+AC
Sbjct: 388 AAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNAC 447
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ ++ GR+ +++ +R + ++ + G+ G + EAE + + MP + + +
Sbjct: 448 SNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLV 507
Query: 247 -WGSLLAA 253
W +L A
Sbjct: 508 TWNVMLGA 515
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 12/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N ++ Y + G L A A+F M E+NV+SWT LI+ AQ A LFR M +E +
Sbjct: 64 NCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSA 123
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL----NTIVPLNNALIDMYAKSGKIG 127
P+ ++A L+ACA + +G IH I + GL T + NA+I+MYAK G +
Sbjct: 124 APNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLE 183
Query: 128 KALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSAC 186
A+ VF + K V++WT M A +AL +F M + PN ITFI L AC
Sbjct: 184 DAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC 243
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF--EANA 244
L + + + ++ G +P +I++ G+ G + A + + M E +
Sbjct: 244 --TSLRDGTWLHSLLHEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDL 299
Query: 245 AIWGSLLAAS 254
W ++++AS
Sbjct: 300 VSWNAMISAS 309
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 24/253 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +++ YAK G + A A+F + K +VISW T++ + + F M + +
Sbjct: 374 NAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIG 127
P++++ +A L+AC+ A++ G IH+ I Y +++ + L+ MY K G I
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKCGSIS 490
Query: 128 KALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+A VF+ M ++S++TW M+ A + +EA M + V P+ ++F ++LS+
Sbjct: 491 EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSS 550
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFE 241
C ++ R I++S Y + C +I + GR L++A + M
Sbjct: 551 CYCSQEAQVLR--MCILESGY-------RSACLETALISMHGRCRELEQARSVFNEMD-H 600
Query: 242 ANAAIWGSLLAAS 254
+ W ++++A+
Sbjct: 601 GDVVSWTAMVSAT 613
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V+ Y K G ++ A +F+ M +++++W ++ YAQ D+ EA M V
Sbjct: 479 LVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ + LS+C + + + I + G + L ALI M+ + ++ +A V
Sbjct: 539 PDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCRELEQARSV 594
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + V++WT M++ A + +E ++F RM+ V P++ T L C +
Sbjct: 595 FNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTL 654
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
LG + + + G+E I ++++ G +EA M
Sbjct: 655 GLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
A L +C + G+ H I GL + L N LI+MY + G + +A +F M+ +
Sbjct: 30 ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V++WT +I+ A G A +F M + PN T +A+L+AC + + +GR
Sbjct: 90 NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS- 148
Query: 199 FNIMKSRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ M G+E MI++ + G L++A + +P E + W ++ A
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP-EKDVVSWTAMAGA 206
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 217/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +M+ GY K +++A + F+ + ++V++WT LI G+ Q QP A+ LF RM +E
Sbjct: 182 WGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGH 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + ++ LSACA +GA++LG IH Y + + + ++NAL+DMYAKSG I A
Sbjct: 242 RPTHVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFS 301
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ +++K TWTTMI+ + G G++AL++F M RA V PN +TF+++LSAC H GL
Sbjct: 302 VFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGL 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G F+ M+ Y I+P +E YGCMIDLLGR G L+EAE L+ M E + IW SLL
Sbjct: 362 IEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLL 421
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A + G+ L E A + ++K EP + G Y +L N+YA +W E+ ++R+ M + + K
Sbjct: 422 SACLVRGNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFK 481
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE+ VHEF+ D +H +Y+ L ++ Q+K
Sbjct: 482 KPGCSWIEIDGAVHEFLVEDKTHDARREIYETLEYMSRQLK 522
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 139/272 (51%), Gaps = 33/272 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA G + +AR LF+ + ++IS+T+L++ + Q+D EAI+LF R+ +PD A+
Sbjct: 57 YADFGRVADARKLFDEIPNPDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAV 116
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ ALSA + G +G +H I + GL+ V + NALIDMY++ GK A++VF+ M
Sbjct: 117 VGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSL 176
Query: 139 KSVITWTTMIAG----------------------------LALHGLGRE---ALDMFSRM 167
K +TW +M+ G + H GR+ AL++F RM
Sbjct: 177 KDEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRM 236
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+P +T + +LSAC +G ++LG R + S+ I ++D+ ++G+
Sbjct: 237 VLEGHRPTHVTIVGVLSACADIGALDLG-RVIHGYGSKCNASLNIIVSNALMDMYAKSGH 295
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++ A + + + ++ W ++++ + GD
Sbjct: 296 IEMAFSVFQEVQ-SKDSFTWTTMISCCTVQGD 326
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 208/341 (60%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY G ++ A++ FE M E+N+++WT +I+G AQ E++ LF RM+ E
Sbjct: 364 WNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGF 423
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A A+ ACA L A+ G +H + + G ++ + NALI MYAK G + A
Sbjct: 424 EPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHC 483
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++W MIA L HG G +AL++F M + + P+ ITF+ +LS C H GL
Sbjct: 484 LFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGL 543
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYF M YGI P + Y MIDLL RAG EA+ ++ MP E IW +LL
Sbjct: 544 VEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALL 603
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+++LG A + L +L P + G Y +LSN+YA +GRW++ K+RK+MRD GVKK
Sbjct: 604 AGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKK 663
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV +VH F+ D HP+ +Y L ++ +M+
Sbjct: 664 EPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMR 704
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+AGY + G+L+ AR + MTEK V++W +I+GY EA+ +FR+M + +
Sbjct: 228 WTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGI 287
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIG 127
+ DE + LSACA G G+ +H YI + L+ + +NNAL +Y K GK+
Sbjct: 288 QWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVD 347
Query: 128 KALQV-------------------------------FENMKNKSVITWTTMIAGLALHGL 156
+A QV FE M ++++TWT MI+GLA +G
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGF 407
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
G E+L +F+RM+ +P + F + AC + + GR+ + R G + +
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQ-LHAQLVRLGFDSSLSAGN 466
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+I + + G ++ A L MP+ ++ W +++AA +G
Sbjct: 467 ALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHG 507
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 13 NTMVAGYAKVGDLNNARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T++A ++ G+ N AR +F + ++ + + +I GY+ + AI LFR +
Sbjct: 85 TTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNG 144
Query: 71 VKPDEIAMLAALSACAQLGAVE-LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---- 125
+PD + L A A + E + IH + + G + + NAL+ ++ K
Sbjct: 145 FRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLV 204
Query: 126 -----IGKALQVFENMKNKSVITWTTMIAGLAL--------------------------- 153
+ A ++F+ M + ++WTTMIAG
Sbjct: 205 SSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMIS 264
Query: 154 ----HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRY 206
HG EAL+MF +M ++ +E T+ ++LSAC + G G++ Y + R
Sbjct: 265 GYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRP 324
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + + L + G + EA ++ +MP + + W ++L+
Sbjct: 325 SLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSG 370
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 1/346 (0%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
T++ YA+ GD AR +F + + V+S+ +I + +P EA+ LFR MQ + +K
Sbjct: 182 TLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKL 241
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ +++ LSACA LGA+ELG WIH Y+ + L+++V +N ALIDMY K G + A+ VF
Sbjct: 242 TSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVF 301
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M+++ W+ MI A H GREA+ +F M++ +KP+++TF+ +L AC H GLV
Sbjct: 302 QGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVS 361
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YF+ M+ +G+ P I+ YGC+ DLL R+G L A + + +P + A +W +LL+A
Sbjct: 362 EGLQYFDSMRE-FGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSA 420
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
GD +LG+ + +++L+ + G+Y I SN+ A GRW E ++RK+M + GV K+P
Sbjct: 421 CGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVP 480
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
GCS IEV RVHEF AGD HP +++ + Q+K A ++ N
Sbjct: 481 GCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPN 526
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISW-TTLIAGYAQMD-----QP--NEAITLFRRMQVE 69
G AK L+ AR +F+ + + W TL+ GYA+ +P EA +F RM E
Sbjct: 77 GAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEE 136
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V PD ++ L ACA A E G H + G + LI+MYA+ G A
Sbjct: 137 GVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAA 196
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+F + + V+++ MI EAL +F M+ +K +T I++LSAC +
Sbjct: 197 RTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALL 256
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G +ELGR ++ + ++ ++ +ID+ G+ G L++A + + M A W
Sbjct: 257 GALELGRWIHEYVR-KVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQA-WSV 314
Query: 250 LLAA 253
++ A
Sbjct: 315 MIVA 318
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L K ++ Y K G L +A ++F+ M ++ +W+ +I YA EAI+LF M+
Sbjct: 277 LVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMK 336
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
+ +KPD++ L L AC+ G V G + + ++GL + + D+ A+SG++
Sbjct: 337 KQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSGQLD 396
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRM 167
+A + + + K + I W T+++ G +F R+
Sbjct: 397 RAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERI 437
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 221/340 (65%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G +++AR F+++ EKN+IS+ T+I YA+ EA+ LF ++ + +
Sbjct: 415 NSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMG 474
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +G + GE IH + + GL + NALI MY++ G I A QV
Sbjct: 475 ASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQV 534
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+M++++VI+WT++I G A HG +AL++F +M V+PN +T+IA+LSAC HVGLV
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLV 594
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++F M + +G+ P++E Y CM+D+LGR+G L EA + + MP++A+A +W + L
Sbjct: 595 NEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLG 654
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G++ELG+ A + +I+ EPH+ Y +LSN+YA +W+E IRK M++ + K
Sbjct: 655 ACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKE 714
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS++EV +VH+F GDTSHP +Y L ++ ++K
Sbjct: 715 AGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 14/239 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL +A +FE M E+N ++WT +I Q EAI LF M + +PD + +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNK 139
SACA + + LG+ +H+ ++GL + LI+MYAK G + A ++F+ + +
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 140 SVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V +WT MI G G EALD+F M V PN TF + L AC ++ + +G +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 199 FNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
F + ++ C +I + R+G + +A K + FE N + +++ A
Sbjct: 399 FT-----HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 9/261 (3%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAI 60
TL R + M A + G + AR +F+ + + NV SWT +I GY Q EA+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LFR M + +V P+ + L ACA L A+ +GE + + + G +++ + N+LI MY
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMY 421
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
A+SG+I A + F+ + K++I++ T+I A + EAL++F+ +E + + TF
Sbjct: 422 ARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFA 481
Query: 181 AILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRR 237
++LS +G + G + + ++KS G+ K+ Q C +I + R G ++ A ++
Sbjct: 482 SLLSGAASIGTIGKGEQIHARVIKS--GL--KLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 238 MPFEANAAIWGSLLAASNIYG 258
M + N W S++ +G
Sbjct: 538 ME-DRNVISWTSIITGFAKHG 557
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N++++ Y+K G A ++F+LM + +++ISW+ +++ +A + A+ F M
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKS-GKIGKA 129
P+E AA AC+ V +G+ I ++ + G L + V + LIDM+ K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M ++ +TWT MI L G EA+D+F M + +P+ T ++SAC ++
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA---GYLQEAEKLLRRMPFEANAAI 246
L+ LG++ + R+G+ C+I++ + G + A K+ ++ + N
Sbjct: 285 ELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFS 342
Query: 247 WGSLLAA 253
W +++
Sbjct: 343 WTAMITG 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
++AI+ M + PD L C + + ++G +H + Q L N+L
Sbjct: 48 HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107
Query: 117 IDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
I +Y+K G+ KA +F+ M ++ +I+W+ M++ A + +G AL F M PN
Sbjct: 108 ISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC-MIDLLGRA-GYLQEAEK 233
E F A AC V +G F + ++ + GC +ID+ + G L A K
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV-CVGCGLIDMFVKGRGDLVSAFK 226
Query: 234 LLRRMPFEANAAIW 247
+ +MP E NA W
Sbjct: 227 VFEKMP-ERNAVTW 239
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 221/346 (63%), Gaps = 6/346 (1%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
+ RL W+ M++GYAKVGD+++AR F+ EK+ W +I+GY Q E + LF
Sbjct: 166 MPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLF 225
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
R +Q+ +V PDE ++ LSACA LGA+++G WIH Y+ + ++ + L+ +L+DMYAK
Sbjct: 226 RLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKC 285
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + A ++F++M + ++ W MI+GLA+HG G AL MFS ME+ +KP++ITFIA+
Sbjct: 286 GNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVF 345
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA- 242
+AC + G+ G + + M S Y IEPK E YGC++DLL RAG EA ++RR+ +
Sbjct: 346 TACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSW 405
Query: 243 ----NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
W + L+A +G +L E A + L++LE H SG Y +LSN+YA G+ +++
Sbjct: 406 NGSEETLAWRAFLSACCNHGQAQLAERAAKRLLRLENH-SGVYVLLSNLYAASGKHSDAR 464
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
++R +MR+ GV K PGCS +E+ V EF+AG+ +HP + ++ +L
Sbjct: 465 RVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHSVL 510
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 132/307 (42%), Gaps = 48/307 (15%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LSRLL + G L A +FE + + T+I +
Sbjct: 38 FALSRLL------AFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTFLVNGNFYGTFH 91
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F +M + PD + L ACA L LG+ +H Y + GL + + N+L+ MY+
Sbjct: 92 VFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYS 151
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------------------- 155
G + A VF+ M S ++W+ MI+G A G
Sbjct: 152 VCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISG 211
Query: 156 -----LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYG 207
+E L +F ++ V P+E F++ILSAC H+G +++G RY N R
Sbjct: 212 YVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLN----RKT 267
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ I ++D+ + G L+ A++L MP E + W ++++ ++GD G AL
Sbjct: 268 VSLSIRLSTSLLDMYAKCGNLELAKRLFDSMP-ERDIVCWNAMISGLAMHGD---GASAL 323
Query: 268 QHLIKLE 274
+ ++E
Sbjct: 324 KMFSEME 330
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 219/352 (62%), Gaps = 5/352 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K W +MV GY G ++ AR LFE K+V+ WT ++ GY Q ++ +EA+ LFR MQ
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD +++ L+ CAQ GA+E G+WIH YI + + + AL+DMYAK G I A
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L+VF +K + +WT++I GLA++G+ ALD++ ME V+ + ITF+A+L+AC H
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN---AAI 246
G V GR+ F+ M R+ ++PK E C+IDLL RAG L EAE+L+ +M E++ +
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPV 453
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
+ SLL+A+ YG+V++ E + L K+E +S + +L+++YA RW + +R+ M+D
Sbjct: 454 YCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKD 513
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDT--SHPDFDRLYQILCKINGQMKFAEH 356
+G++K PGCS IE+ HEF+ GD SHP D + +L + M EH
Sbjct: 514 LGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDLEH 565
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 144/275 (52%), Gaps = 43/275 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
N+++ YA +G + +F+ M +++V+SW LI+ Y + +AI +F+RM Q N+
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
K DE +++ LSAC+ L +E+GE I+ + + ++ ++ V + NAL+DM+ K G + KA
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS--VRIGNALVDMFCKCGCLDKAR 202
Query: 131 QVFENMKNKSVITWTTMIAGLALHG-----------------------------LGR--E 159
VF++M++K+V WT+M+ G G R E
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE 262
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYG 216
AL++F M+ A ++P+ +++L+ C G +E G+ Y N ++R ++ +
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN--ENRVTVDKVVGT-- 318
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G ++ A ++ + E + A W SL+
Sbjct: 319 ALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 147/309 (47%), Gaps = 22/309 (7%)
Query: 34 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 93
L+ +++ + ++ A + + LF ++ + + PD + L + +L V
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
GE +H Y + GL ++N+L+ MYA GKI +VF+ M + V++W +I+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 154 HGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
+G +A+ +F RM + + +K +E T ++ LSAC + +E+G R + + + + + +I
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC-ALQHLI 271
++D+ + G L +A + M + N W S+ ++G V G + L
Sbjct: 185 GN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSM-----VFGYVSTGRIDEARVLF 236
Query: 272 KLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IE 319
+ P + + + N Y R++E+ ++ + M+ G++ + GC+ +E
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 320 VSKRVHEFV 328
K +H ++
Sbjct: 297 QGKWIHGYI 305
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 212/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY G + A++ FE M KN+++ T +I+G AQ +E + LF++M+++
Sbjct: 362 WNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGF 421
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A AL+AC+ LGA+E G +H + G + + + NA+I MYAK G + A
Sbjct: 422 EPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAES 481
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M + +++W +MIA L HG G +A+++F +M + V P+ ITF+ +L+AC H GL
Sbjct: 482 VFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGL 541
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR YFN M YGI P + Y M+DL RAG A ++ MP + A +W +LL
Sbjct: 542 VEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALL 601
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+++LG A + L KL P N G Y +LSNIYA +GRWNE K+RK+MRD V+K
Sbjct: 602 AGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRK 661
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS+IEV +VH F+ D HP+ +Y+ L ++ +MK
Sbjct: 662 EPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMK 702
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ GY + DLN AR +FE M E +W +I+GY EA+TL R+M+ +
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGI 285
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAKSGKIG 127
+ D+I +SACA +G+ ++G+ +H YI + LN + ++NALI +Y K+ K+
Sbjct: 286 QFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVD 345
Query: 128 KALQVFENMKNKSVITW-------------------------------TTMIAGLALHGL 156
+A ++F M +++ITW T MI+GLA +G
Sbjct: 346 EARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGF 405
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
G E L +F +M +P + F L+AC +G +E GR+ + G E +
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ-LHAQLVHLGYESSLSVGN 464
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
MI + + G ++ AE + MP + W S++AA +G
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHG 505
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 51/288 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T++ Y +G+L R +F + ++ + + +I GYA + A+ LFR M+ ++
Sbjct: 83 TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 71 VKPDEIAMLAALSACAQ-LGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAK-SGKIG 127
+PD+ + LSA +G + +H + + G+ + + NAL+ +Y K + ++G
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELG 202
Query: 128 -------KALQVFENMKNKSVITWTTMIAGLALH-------------------------- 154
A ++F+ M + +TWTTMI G +
Sbjct: 203 ISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMIS 262
Query: 155 -----GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 208
G +EAL + +M ++ ++IT+ I+SAC +VG ++G++ + I+K+ +
Sbjct: 263 GYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE--L 320
Query: 209 EPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
P + +I L + + EA K+ MP N W ++L+
Sbjct: 321 NPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILS 367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 33/130 (25%)
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT-- 146
+ L +H ++ G N L++MY KS + A Q+FE + N I TT
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLI 86
Query: 147 -------------------------------MIAGLALHGLGREALDMFSRMERARVKPN 175
MI G A +G G AL++F M R +P+
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 176 EITFIAILSA 185
+ TF ++LSA
Sbjct: 147 DFTFTSVLSA 156
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 53/297 (17%)
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
R++ E PD IA ++A LG +ELG I N Y +++ NA+I YA +
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV--FYNAMITGYAHN 125
Query: 124 GKIGKALQVFENMKNKSV----ITWTTMIAGLALHGLGREALDMFSRMERARVKPN-EIT 178
G AL++F M+ T+T++++ L L +G E +M A VK
Sbjct: 126 GDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLF-VGNE--QQCGQMHCAVVKTGMGCV 182
Query: 179 FIAILSACCHVGL---VELG---------RRYFNIMKSR---------------YGIEPK 211
++L+A V + ELG R+ F+ M R +
Sbjct: 183 SSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGA 242
Query: 212 IEQYGCMIDLLGRA-----------GYLQEAEKLLRRMPF---EANAAIWGSLLAASNIY 257
E + M++ LG A G QEA L R+M F + + + ++++A
Sbjct: 243 REVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANV 302
Query: 258 GDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
G ++G+ +++K L P++S ++ + + + + N+ + RK+ M V+ +
Sbjct: 303 GSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNI 359
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 232/359 (64%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ YAK G+ + AR +F+ + +K+ +S+ ++++ YAQ NEA +FRR+ E
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEK 281
Query: 71 VKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V + I + L A + GA+ +G+ IH+ + + GL V + ++IDMY K G++ A
Sbjct: 282 VVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
F+ MKNK+V +WT MIAG +HG +AL++F M + V+PN ITF+++L+AC H
Sbjct: 342 RLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GL ++G +FN MK R+G+EP +E YGCM+DLLGRAG+LQ+A L+++M E ++ IW S
Sbjct: 402 GLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSS 461
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLAA I+ +VEL E ++ L +L+P N G Y +LS+IYA GRW + ++R M++ G+
Sbjct: 462 LLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGL 521
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K PG S +E++ VH F+ GD HP +++Y+ L ++N ++ A ++ N S + D
Sbjct: 522 VKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVD 580
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 140/255 (54%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+ G L +AR +F+ + ++N++SWT++I GY +A++LF+ + +E
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEEND 174
Query: 73 P------DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
D + M++ +SAC+++ A L E IH+++ + G + V + N L+D YAK G+
Sbjct: 175 DDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 127 GKAL--QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-NEITFIAIL 183
G A+ ++F+ + +K +++ ++++ A G+ EA D+F R+ + +V N IT +L
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVL 294
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
A H G + +G+ + + R G+E + +ID+ + G ++ A RM N
Sbjct: 295 LAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK-NKN 352
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 353 VRSWTAMIAGYGMHG 367
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAIT 61
++SRLL+ +T + N LF +K +V SW ++IA A+ EA+
Sbjct: 12 SVSRLLHTERHT---------ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALR 62
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
F M+ ++ P + A+ AC+ L + G+ H +G + + +++ALI MY+
Sbjct: 63 AFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM------ERARVKPN 175
GK+ A +VF+ + +++++WT+MI G L+G +A+ +F + + A + +
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLD 182
Query: 176 EITFIAILSACCHV---GLVE-----LGRRYF-------NIMKSRYG------------- 207
+ ++++SAC V GL E + +R F N + Y
Sbjct: 183 SMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 208 ----IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAIWGSLLAASNIYGD 259
++ Y ++ + ++G EA + RR+ E N ++L A + G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGA 302
Query: 260 VELGECALQHLIKL 273
+ +G+C +I++
Sbjct: 303 LRIGKCIHDQVIRM 316
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 211/344 (61%), Gaps = 4/344 (1%)
Query: 4 LSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
SR++ K WN+ +A + L+ AR F+ M ++ +SWTT+I+ YA +Q NEA+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
F+ M E+ P+ + L C LGA ++G+ IH + G+++ + + NALI MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
K G + ++F+ M+ + + TW T+I G A HGLGREA+ M+ ME A V PNE+TF+
Sbjct: 597 FKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+L+AC H GLV+ G ++F M YG+ P E Y CM+DLLGR G +Q AE+ + MP
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E + IW +LL A I+ + E+G+ A + L ++EP N+GNY +LSNIY+ LG W E ++
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
RK+M+ GV K PGCS+ ++ ++H FV GD H + + L
Sbjct: 776 RKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 16/281 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY + +AR LFE M E+N++SWT +I+GY +++ +A +F +M E +
Sbjct: 161 WNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGL 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-GKAL 130
PD+ +ALSA LG +++ E + + G V + A++++Y++ + A+
Sbjct: 221 LPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ FE+M ++ TW+TMIA L+ G A+ ++ ER VK A+++ G
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACR-TALITGLAQCG 336
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ R F + EP + + +I + G + EA++L +MPF N W +
Sbjct: 337 RIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGM 390
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 291
+A G E LQ L H SG LS++ +I
Sbjct: 391 IAGYAQNGRSEEALGLLQEL-----HRSGMLPSLSSLTSIF 426
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY + G +N A+ LF+ M +N ISW +IAGYAQ + EA+ L + + +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P ++ + AC+ + A+E G +H+ + G NALI MY K + A Q
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
VF M K +++W + +A L + L EA + F M + +++++ I+SA H
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 14/231 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A FE M E+N +W+T+IA + + + AI ++ R V+++ A ++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA----CRTALITG 331
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
AQ G ++ + I + IV NALI Y ++G + +A ++F+ M ++ I+W
Sbjct: 332 LAQCGRIDDARILFEQIPE----PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
MIAG A +G EAL + + R+ + P+ + +I AC ++ +E G + ++
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 205 RYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + + C +I + G+ ++ A ++ RM + W S LAA
Sbjct: 448 ---VGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++ Y G + AR L++ ++ N+ + L++GY ++ + EA +F M N
Sbjct: 68 WNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT 127
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+A A +S Q G + + + + + +++ N+++ Y S ++ A
Sbjct: 128 ----VAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW----NSMLTGYCHSLQMVDARN 179
Query: 132 VFENMKNKSVITWTTMIAG---LALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+FE M +++++WT MI+G + HG +A D+F +M R + P++ F + LSA
Sbjct: 180 LFEKMPERNLVSWTVMISGYGRIENHG---KAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAIW 247
+G +++ ++ + G E + ++++ R L A K M E N W
Sbjct: 237 LGNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IERNEYTW 294
Query: 248 GSLLAASNIYGDVE 261
+++AA + G ++
Sbjct: 295 STMIAALSHGGRID 308
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
+A I + G++G+A +VF+ M + +I W +MI+ +G+ A D++ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
I +LS +G V RR F+ M R + + MI + G + A +
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTV-----AWNAMISCYVQNGDITMARR 148
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L MP + + W S+L
Sbjct: 149 LFDAMP-SRDVSSWNSMLTG 167
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 211/344 (61%), Gaps = 4/344 (1%)
Query: 4 LSRLLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
SR++ K WN+ +A + L+ AR F+ M ++ +SWTT+I+ YA +Q NEA+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
F+ M E+ P+ + L C LGA ++G+ IH + G+++ + + NALI MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
K G + ++F+ M+ + + TW T+I G A HGLGREA+ M+ ME A V PNE+TF+
Sbjct: 597 FKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+L+AC H GLV+ G ++F M YG+ P E Y CM+DLLGR G +Q AE+ + MP
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E + IW +LL A I+ + E+G+ A + L ++EP N+GNY +LSNIY+ LG W E ++
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
RK+M+ GV K PGCS+ ++ ++H FV GD H + + L
Sbjct: 776 RKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 16/281 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY + +AR LFE M E+N++SWT +I+GY +++ +A +F +M E +
Sbjct: 161 WNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGL 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-GKAL 130
PD+ +ALSA LG +++ E + + G V + A++++Y++ + A+
Sbjct: 221 LPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ FE+M ++ TW+TMIA L+ G A+ ++ ER VK A+++ G
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACR-TALITGLAQCG 336
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ R F + EP + + +I + G + EA++L +MPF N W +
Sbjct: 337 RIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGM 390
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 291
+A G E LQ L H SG LS++ +I
Sbjct: 391 IAGYAQNGRSEEALGLLQEL-----HRSGMLPSLSSLTSIF 426
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY + G +N A+ LF+ M +N ISW +IAGYAQ + EA+ L + + +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P ++ + AC+ + A+E G +H+ + G NALI MY K + A Q
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
VF M K +++W + +A L + L EA + F M + +++++ I+SA H
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 14/231 (6%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A FE M E+N +W+T+IA + + + AI ++ R V+++ A ++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA----CRTALITG 331
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
AQ G ++ + I + IV NALI Y ++G + +A ++F+ M ++ I+W
Sbjct: 332 LAQCGRIDDARILFEQIPE----PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
MIAG A +G EAL + + R+ + P+ + +I AC ++ +E G + ++
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 205 RYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + + C +I + G+ ++ A ++ RM + W S LAA
Sbjct: 448 ---VGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++ Y G + AR L++ ++ N+ + L++GY ++ + EA +F M N
Sbjct: 68 WNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT 127
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+A A +S Q G + + + + + +++ N+++ Y S ++ A
Sbjct: 128 ----VAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW----NSMLTGYCHSLQMVDARN 179
Query: 132 VFENMKNKSVITWTTMIAG---LALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+FE M +++++WT MI+G + HG +A D+F +M R + P++ F + LSA
Sbjct: 180 LFEKMPERNLVSWTVMISGYGRIENHG---KAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAIW 247
+G +++ ++ + G E + ++++ R L A K M E N W
Sbjct: 237 LGNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IERNEYTW 294
Query: 248 GSLLAASNIYGDVE 261
+++AA + G ++
Sbjct: 295 STMIAALSHGGRID 308
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
+A I + G++G+A +VF+ M + +I W +MI+ +G+ A D++ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
I +LS +G V RR F+ M R + + MI + G + A +
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTV-----AWNAMISCYVQNGDITMARR 148
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L MP + + W S+L
Sbjct: 149 LFDAMP-SRDVSSWNSMLTG 167
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 221/342 (64%), Gaps = 2/342 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE--N 70
T++ YAK G ++ A ++F M KN +SW+ +IA +A+ + P +A+ LF+ M E N
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACN 281
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ + M+ L ACA L A+E G+ IH YI + L++I+P+ NALI MY + G++
Sbjct: 282 SVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQ 341
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+NMK + V++W ++I+ +HG G++A+ +F M V P+ I+FI +L AC H G
Sbjct: 342 RVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAG 401
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ F M S+Y I P +E Y CM+DLLGRA L EA KL+ M FE +WGSL
Sbjct: 402 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSL 461
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L + I+ +VEL E A L +LEP N+GNY +L++IYA W+E+ + K++ G++
Sbjct: 462 LGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQ 521
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K+PGCS+IEV ++V+ FV+ D +P + ++ +L K++ +MK
Sbjct: 522 KLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMK 563
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 11/260 (4%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y ++G ++ A +F+ E+ + W L A + E + L+ +M D
Sbjct: 119 LINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSD 178
Query: 75 EIAMLAALSAC--AQLGAVEL--GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
L AC ++L L G+ IH +I ++G + + L+D+YAK G + A
Sbjct: 179 RFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYAN 238
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCH 188
VF M K+ ++W+ MIA A + + +AL++F M E PN +T + +L AC
Sbjct: 239 SVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAG 298
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+ +E G+ + R ++ + +I + GR G + +++ M + + W
Sbjct: 299 LAALEQGKLIHGYILRR-QLDSILPVLNALITMYGRCGEVLMGQRVFDNMK-KRDVVSWN 356
Query: 249 SLLAASNIYGDVELGECALQ 268
SL++ IYG G+ A+Q
Sbjct: 357 SLIS---IYGMHGFGKKAIQ 373
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + +CAQ ++ G +H + G + L LI+MY + G I +AL+V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + +++ W + LA+ G G+E LD++ +M + T+ +L AC L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 193 ELGRRYFNIMKS---RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
R + + R+G E I ++D+ + G + A + MP + N W +
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSA 254
Query: 250 LLAA 253
++A
Sbjct: 255 MIAC 258
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 217/335 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G L+ A +F M +K+V+SWT+L+ GY+ EAI LF +M++ V
Sbjct: 80 NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+IA+ + LSACA+L ++ G+ IH + + GL + + ++N+L+ MYAK G I A +
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+NM + VI+WT +I G A +G G+ +L + +M KP+ ITFI +L AC H GL+
Sbjct: 200 FDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLL 259
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR YF M YGI+P E Y CMIDLLGR+G L EA+ LL +M +A +W +LLA
Sbjct: 260 GSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLA 319
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ ++ELGE A ++L +LEP NS Y +LSN+Y+ G+W ++ +IR++MR G+ K
Sbjct: 320 ACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKE 379
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
PG S+IE + +V F++ D +HP + +Y + +I
Sbjct: 380 PGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEI 414
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
+SW +LI G + +A++ F++M+ ++K DE + + L++ A + ++ +H
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
I + G +NNALIDMYAK GK+ A+ VF M +K V++WT+++ G + +G EA
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
+ +F +M + V P++I ++LSAC + +++ G++ + ++KS G+E + ++
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS--GLESSLSVDNSLV 184
Query: 220 DLLGRAGYLQEAEKLLRRMP 239
+ + G + +A + MP
Sbjct: 185 TMYAKCGSIVDANRAFDNMP 204
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 218/337 (64%), Gaps = 1/337 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K+GD N A +FEL+ EK++++W+ +++GYAQM A+ +F ++ E V+P+E
Sbjct: 437 YSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTF 496
Query: 79 LAALSACA-QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L+ACA +VE G+ H+ + G + + +++AL+ MYAK G I A +VF+
Sbjct: 497 SSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV 556
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
++ +++W +MI+G A HG G+++L +F M ++ + ITFI ++SAC H GLV G+R
Sbjct: 557 DRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQR 616
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
YF++M Y I P +E Y CM+DL RAG L++A L+ +MPF A A IW +LLAA ++
Sbjct: 617 YFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+V+LGE A + LI L+P +S Y +LSNIYA G W E K+RK+M VKK G S+
Sbjct: 677 LNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSW 736
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
IEV + F+AGD SHP DR+Y L +++ ++K A
Sbjct: 737 IEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA 773
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 131/242 (54%), Gaps = 3/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V Y K + + +F+ M KNV+SWT+L+AGY Q +A+ LF +MQ+E +K
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ A L A GAVE G +H + + GL++ + + N++++MY+KS + A V
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++M+N++ ++W +MIAG +GL EA ++F RM VK + F ++ C ++ +
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + ++K+ + I+ ++ + + +A KL M N W +++
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKT--ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAII 368
Query: 252 AA 253
+
Sbjct: 369 SG 370
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 129/250 (51%), Gaps = 7/250 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+MV Y+K +++A+A+F+ M +N +SW ++IAG+ EA LF RM++E VK
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVK 291
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + CA + + + +H + + G + + + AL+ Y+K +I A ++
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 133 FENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++V++WT +I+G +G A+++F +M R V+PN T+ IL+A V
Sbjct: 352 FCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP 411
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + ++K+ Y P + + D + G EA K+ + E + W ++L
Sbjct: 412 SQI---HALVVKTNYENSPSVGT--ALSDSYSKIGDANEAAKIFELID-EKDIVAWSAML 465
Query: 252 AASNIYGDVE 261
+ GD+E
Sbjct: 466 SGYAQMGDIE 475
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 128/246 (52%), Gaps = 8/246 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++ Y+K ++++A LF +M +NV+SWT +I+GY Q + + A+ LF +M+ E V+P
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRP 394
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L+A A + + IH + + + AL D Y+K G +A ++F
Sbjct: 395 NHFTYSTILTANAAVSPSQ----IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF 450
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC-CHVGLV 192
E + K ++ W+ M++G A G A+ +F ++ + V+PNE TF ++L+AC V
Sbjct: 451 ELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASV 510
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G++ F+ + G + ++ + + G ++ A ++ +R + + W S+++
Sbjct: 511 EQGKQ-FHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMIS 568
Query: 253 ASNIYG 258
+G
Sbjct: 569 GYAQHG 574
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 86
+++ LF+ ++ + L+ +++ DQ EA+ LF ++ D ++ L C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 87 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 146
L +G+ +H + G V + +L+DMY K+ + +VF+ M+ K+V++WT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
++AG +GL +AL +FS+M+ +KPN TF A+L G VE G + + M +
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKS 222
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G++ I M+++ ++ + +A+ + M NA W S++A
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAG 268
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK G++ +A +F+ +++++SW ++I+GYAQ +++ +F M+ +N++
Sbjct: 533 SALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLE 592
Query: 73 PDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D I + +SAC G V G+ + ++ Y + + + ++D+Y+++G + KA+
Sbjct: 593 LDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMD 652
Query: 132 VFENMKNKSVIT-WTTMIAGLALH 154
+ M + T W T++A +H
Sbjct: 653 LINKMPFPAGATIWRTLLAACRVH 676
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 220/362 (60%), Gaps = 6/362 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T++ LL NT + + V + +F + K+++SW +IA Y P EA+ +
Sbjct: 240 TMASLLPAVTNTCLDNVSFV------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDI 293
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
F +M+ V PD I++ + L AC L A+ LG IH Y+ + L + L NALIDMYAK
Sbjct: 294 FLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 353
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + A +VF+ MK + V++WT+MI+ ++G GR+A+ +FSRM+ + P+ I F+++
Sbjct: 354 CGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSV 413
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
LSAC H GL++ GR YF +M I P+IE + CM+DLLGRAG + EA +++MP E
Sbjct: 414 LSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 473
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
N +WG+LL+A +Y ++ +G A L +L P SG Y +LSNIYA GRW + +R
Sbjct: 474 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 533
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
+M+ G+KKMPG S E+ RVH F+AGD SHP ++Y+ L G+MK A ++ S
Sbjct: 534 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDS 593
Query: 363 GV 364
+
Sbjct: 594 AL 595
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y K G L A + + M ++V+SW +L+AG A+ Q ++A+ + + M++ +K
Sbjct: 176 NGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLK 235
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M + L A + N +D + ++
Sbjct: 236 PDAGTMASLLPA---------------------------VTNTCLD------NVSFVKEM 262
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + NKS+++W MIA + + EA+D+F +ME V P+ I+ ++L AC + +
Sbjct: 263 FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSAL 322
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LGRR + R ++P + +ID+ + G L+ A ++ +M F + W S+++
Sbjct: 323 LLGRRIHEYV-VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMIS 380
Query: 253 ASNIYG 258
A + G
Sbjct: 381 AYGMNG 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA G+ + R +F+ + +KNV+ + +I Y ++A+ +F+ M + PD
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L A + + +G IH + + GL+ V + N LI MY K G + +A +V +
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M + V++W +++AG A +G +AL++ ME +KP+ T ++L A
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA 247
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 211/341 (61%), Gaps = 1/341 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N+ ++ + + AR +F M +V+SWTT+I+ AQ DQ NEA+ +FR M E
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + L LGA +LG+ IH + G+++ + + NAL+ MY K +L+
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLK 605
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++M+ + + TW T+I G A HGLGREA+ M+ M A V PNE+TF+ +L AC H GL
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G ++F M S YG+ P +E Y CM+DLLGRAG +Q AE + MP E ++ IW +LL
Sbjct: 666 VDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALL 725
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VE+G A + L +EP N+GNY +LSNIY+ G W+E K+RK+M++ GV K
Sbjct: 726 GACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNK 785
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS++++ ++H FV GD H +Y L ++ +K
Sbjct: 786 DPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLK 826
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + AR LFE M E+N +SWT +I+GY ++Q A +FR M E +
Sbjct: 160 WNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGM 219
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-GKIGKAL 130
P++ +++ LSA LG + E IH + + G V + A+++ Y K + A+
Sbjct: 220 TPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAV 279
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ FE M ++ TW+T+IA L+ G +A ++ R V + ++L+ G
Sbjct: 280 KFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGLARYG 335
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ-----EAEKLLRRMPFEANAA 245
++ + F+ + EP + + MI GY+Q EAE L RMPF N
Sbjct: 336 RIDDAKILFDQIH-----EPNVVSWNAMI-----TGYMQNEMVDEAEDLFNRMPFR-NTI 384
Query: 246 IWGSLLAASNIYGDVELGECALQHL 270
W ++A G E +LQ L
Sbjct: 385 SWAGMIAGYARNGRSEQALVSLQAL 409
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY + ++ A LF M +N ISW +IAGYA+ + +A+ + + + +
Sbjct: 355 WNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGM 414
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P ++ ++ AC+ + A+E G+ +H+ + G + NALI +Y K IG Q
Sbjct: 415 LPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQ 474
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+F+ M K +++ + ++ L + L EA D+F+ M P+ +++ I+SAC
Sbjct: 475 IFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISAC 525
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ Y G + R+L + ++ N+ + T L++GYA+ + +A +F M V N
Sbjct: 67 WNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNT 126
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+A A ++ Q G + L + + + +++ N ++ Y S + +A
Sbjct: 127 ----VAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSW----NTMLTGYCHSQLMEEARN 178
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+FE M ++ ++WT MI+G L A DMF M + P + +++LSA H+G
Sbjct: 179 LFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLG 237
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 130/282 (46%), Gaps = 20/282 (7%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
++G L+ AR +F+ M +++I+W ++I Y P+ +L + N++ I
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTIL-- 101
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
LS A+ G V + + G+ V N A++ Y ++G I A ++F+ M ++
Sbjct: 102 --LSGYARAGRVRDARRV---FDGMGVRNTVAWN-AMVTCYVQNGDITLARKLFDAMPSR 155
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY- 198
V +W TM+ G L EA ++F RM + N +++ ++S +V + + GR +
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMP----ERNGVSWTVMISG--YVLIEQHGRAWD 209
Query: 199 -FNIM--KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
F M + +P + + LG+ G L+ L+ + FE + + ++L +
Sbjct: 210 MFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL--NG 267
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 297
DV + + A++ + N ++ + + GR +++
Sbjct: 268 YTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDA 309
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 35/168 (20%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL---GREALDMFS----- 165
+A I + G++ +A +VF++M + +I W +MI +G+ GR D S
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96
Query: 166 -------------RMERAR-------VKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
R+ AR V+ N + + A+++ G + L R+ F+ M SR
Sbjct: 97 TGTILLSGYARAGRVRDARRVFDGMGVR-NTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + M+ + ++EA L RMP E N W +++
Sbjct: 156 -----DVSSWNTMLTGYCHSQLMEEARNLFERMP-ERNGVSWTVMISG 197
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 207/309 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+A YAK D+ +AR +F+ + +K++ISW+++I+GY+Q + ++A+ +FR+MQ VK
Sbjct: 258 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 317
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + + +S+CA LGA++LG+W+H Y+ + + + N+LIDMY K G +ALQV
Sbjct: 318 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 377
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++W ++I GLA +G +E+L++F M +PN +TF+ +L AC + LV
Sbjct: 378 FKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLV 437
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +F MK Y +EP+++ YGC++DLLGRAG L++A + + MP + + +W LL
Sbjct: 438 EEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 497
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ N +GDV + E + L +LEP NSGNY +LSN YA RW+E+ +R+ M D V+K
Sbjct: 498 SCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKS 557
Query: 313 PGCSYIEVS 321
PGCS +E +
Sbjct: 558 PGCSAVEAA 566
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 147/270 (54%), Gaps = 33/270 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA G+L AR++F+ M K+V+SW +LI GY+Q ++ + + LF+ MQ E VK
Sbjct: 126 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVK 185
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++ M+ +SAC +LG + +++ YIE Y + V L N L+D + + G++ A +V
Sbjct: 186 ADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 245
Query: 133 FENMK-------------------------------NKSVITWTTMIAGLALHGLGREAL 161
F NMK K +I+W++MI+G + +AL
Sbjct: 246 FFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDAL 305
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F +M+RA+VKP+ I +++S+C H+G ++LG+ ++ R I+ +ID+
Sbjct: 306 EIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVR-RNNIKADTIMENSLIDM 364
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G +EA ++ + M E + W S++
Sbjct: 365 YMKCGSAKEALQVFKEMK-EKDTLSWNSII 393
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 2/230 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
DL A +F+ + W LI G AQ D P +AI +++ Q + PD + L
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
ACA++ A+ GE +HN+I + GL + + ++N+LI +YA G + A VF+ M K V++
Sbjct: 96 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 155
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++I G + ++ L +F M+ VK +++T I ++SAC +G + ++
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 215
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
Y IE + ++D GR G LQ AEK+ M N +++AA
Sbjct: 216 D-YCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAA 263
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 213/342 (62%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+N AR +F+ + ++V++WT +I GY Q +A+ LFR M E
Sbjct: 349 FTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGP 408
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+ + LS + L +++ G IH + G + V ++NALI MYAKSG I A
Sbjct: 409 KPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARW 468
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF + + ITWT+MI LA HGLG EAL +F RM +KP+ IT++ +LSAC HVG
Sbjct: 469 VFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVG 528
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR Y+N+M++ + I P Y CMIDL GRAG LQEA + MP E + WGSL
Sbjct: 529 LVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSL 588
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LA+ ++ +VEL E A + L+ +EP NSG Y+ L+N+Y+ G+W + IRK M+D GVK
Sbjct: 589 LASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVK 648
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++++ +VH F D HP D +Y+++ KI ++K
Sbjct: 649 KDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIK 690
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 143/259 (55%), Gaps = 35/259 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GYAK G L A +FE M E + +SWT +I GY QM Q AI +FR M ++V
Sbjct: 82 WNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDV 141
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + + L++CA + + +G +H+++ ++GL++ + + N+L++MYAKSG A
Sbjct: 142 PPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKI 201
Query: 132 VFENMKNKS-------------------------------VITWTTMIAGLALHGLGREA 160
VF+ MK KS V++W MI+G HG REA
Sbjct: 202 VFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
LD+FS+M + KP++ T + LSAC ++ ++LG++ + +I+++ + + +
Sbjct: 262 LDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN--AL 319
Query: 219 IDLLGRAGYLQEAEKLLRR 237
I + ++G ++ A+K++ +
Sbjct: 320 ISMYSKSGGVEIAQKIIEQ 338
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 147/290 (50%), Gaps = 38/290 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM++ + + G ++ A+ FE M E++V+SW +I+GY Q EA+ +F +M +++
Sbjct: 214 WNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSS 273
Query: 72 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------- 123
KPD+ + +ALSACA L ++LG+ IH +I + +T + NALI MY+KS
Sbjct: 274 SKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQ 333
Query: 124 --------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
G I A ++F++++ + V+ WT MI G +G
Sbjct: 334 KIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFN 393
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
++A+++F M + KPN T +LS + ++ GR+ + +R G +
Sbjct: 394 QDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ-IHASATRSGNASSVSVSNA 452
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+I + ++G + +A + + ++ + W S++ A +G LGE AL
Sbjct: 453 LITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHG---LGEEAL 499
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV------------ 141
G+ IH I + GL+ V L N L++ YAK+G I A +VF+ M KSV
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 142 -------------------ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
++WT MI G G A+ MF M V P + T +
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L++C V + +GR+ + + ++G+ I ++++ ++G A+ + RM ++
Sbjct: 152 LASCAAVECLGIGRKVHSFV-VKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIK 272
++ W +++++ G V+L + + +I+
Sbjct: 211 TSS-WNTMISSHMQSGLVDLAQVQFEQMIE 239
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/320 (44%), Positives = 212/320 (66%), Gaps = 3/320 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD+ +F+ M ++V+SWT LI GY ++ ++A+ F +MQ V
Sbjct: 148 NSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITGYRSAERYDDALIAFEQMQYAGVV 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + M+ ALSACA GA+E+G WIH +I + G V L +LIDMY K G+I + L V
Sbjct: 208 PNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDMYGKCGRIEEGLVV 267
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +MK K+V TW ++I GLAL G EA+ F RME+ +K +E+T IA+L AC H G+V
Sbjct: 268 FRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEGIKADEVTLIAVLCACSHSGMV 327
Query: 193 ELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++GR+ F ++M +Y P ++ Y C+IDLL RAG LQEA +++ RMPFE N +WG+ L
Sbjct: 328 QMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQEAMEVMTRMPFEPNKVMWGAFL 387
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +GD+EL E A + L++LEP N Y +LSNIYA +GRW++ K+R++M++ G+ K
Sbjct: 388 AGCRAHGDLELSEFAARKLVELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGGLTK 447
Query: 312 MPGCSYIEV--SKRVHEFVA 329
GCS IE+ +RV+E +A
Sbjct: 448 DLGCSSIELEPQERVYELLA 467
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 32 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 91
F ++ +V +LI ++ P+ +++ M ++ P+ L + A +
Sbjct: 66 FTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKGL 125
Query: 92 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 151
G+ IH ++ + G + + N+L+++YA G +G ++VF+ M ++ V++WT +I G
Sbjct: 126 SEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITGY 185
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
+AL F +M+ A V PN +T + LSAC G +E+G ++ R G E
Sbjct: 186 RSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIR-RSGWEFD 244
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ +ID+ G+ G ++E + R M E N W SL+
Sbjct: 245 VILGTSLIDMYGKCGRIEEGLVVFRSMK-EKNVFTWNSLI 283
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 212/326 (65%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K +++AR F+ M++++V++W+T+IAGYAQ +P E++ LF RM+ + +P+E+ +
Sbjct: 295 YVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTL 354
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +SACAQLG+ EL E I NY E L L +ALIDMY + G +G+A VF M+
Sbjct: 355 VGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQ 414
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K VITW +MI GLA++G +A+ ++ +M V+PNEITF+A+L+AC H GLV+ G +
Sbjct: 415 KGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAF 474
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F MK + + P++E C++DLL ++G L EA K + M E NA IW +LL++ +
Sbjct: 475 FEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHA 534
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
DVEL + A + L+ +EP NS Y +LSNIYA G W ++ +IR +MR V+K+ S+I
Sbjct: 535 DVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWI 594
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
++ VH+F+ DT HP +Y ++
Sbjct: 595 KLDGEVHKFLVQDTYHPRSAEIYDVI 620
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 135/240 (56%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY+K GD++ AR LF+ M + SW ++IA YA + EA+TLF RM E +
Sbjct: 189 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGAR 248
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + + S CA+ G ++ G+ + + I + L ++ ++ AL++MY K I A +
Sbjct: 249 PNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVI-VHTALMEMYVKCRAIDDARRE 307
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V+ W+TMIAG A +G E+L++F RM+ +PNE+T + ++SAC +G
Sbjct: 308 FDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSD 367
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
EL + N +++ P G +ID+ R G++ A + RM + W S++
Sbjct: 368 ELVEQIGNYAENQR--LPLTSYLGSALIDMYTRCGHVGRARSVFSRME-QKGVITWNSMI 424
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y + G + AR++F M +K VI+W ++I G A +AI+L+ +M V+
Sbjct: 390 SALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQ 449
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+EI +A L+AC G V+ G + ++ ++ V ++D+ KSG + +A +
Sbjct: 450 PNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYK 509
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+M+ + + WTT+++ H E + SR A N ++ + + G
Sbjct: 510 FICDMEVEPNAVIWTTLLSSCRAHA-DVELAKLASRKLLAMEPDNSSIYVLLSNIYADAG 568
Query: 191 LVELGRRYFNIMKSR 205
L R ++M+S+
Sbjct: 569 LWGDAREIRDLMRSK 583
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 31/206 (15%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ + +T ++ ++ ++ + F M + + +CA
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA-------------------------- 121
+ G +H + GL V + AL+D YA
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCL 191
Query: 122 -----KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
K+G + KA ++F+ M+ ++ +W +MIA A G REAL +F RM +PN
Sbjct: 192 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNA 251
Query: 177 ITFIAILSACCHVGLVELGRRYFNIM 202
IT ++ S C G ++ G+R +++
Sbjct: 252 ITITSVFSICAKSGDLDTGKRVRDLI 277
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 215/344 (62%), Gaps = 4/344 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT ++ Y+K D +AR LF++MT + +SWT +I+GYA+ +EA+ LF M K
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 131
PD + +L+ +S C + G++E G+WI + YG V + NALIDMY+K G I +A
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+N K+V+TWTTMIAG AL+G+ EAL +FS+M KPN ITF+A+L AC H G
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G YF+IMK Y I P ++ Y CM+DLLGR G L+EA +L+R M + +A IWG+LL
Sbjct: 475 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V++ E A + L LEP + Y ++NIYA G W+ +IR +M+ +KK
Sbjct: 535 NACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK 594
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S I+V+ + H F G+ H + + +Y L NG FA+
Sbjct: 595 YPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL---NGLSLFAK 635
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 23/258 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT ++ Y K GDL++A+ +FE + ++ V+SW ++ Y+ + +A L+ M E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD + ++C + G IH++ G + + N I MY+KS A
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M +++ ++WT MI+G A G EAL +F M ++ KP+ +T ++++S C G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGC----------MIDLLGRAGYLQEAEKLLRRMPF 240
+E G+ I+ + + YGC +ID+ + G + EA + P
Sbjct: 372 SLETGK----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP- 420
Query: 241 EANAAIWGSLLAASNIYG 258
E W +++A + G
Sbjct: 421 EKTVVTWTTMIAGYALNG 438
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
Query: 11 FWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
FW+ + G + K ++ A +FE M E++ +W +++G+ Q ++A +LFR
Sbjct: 83 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFR 142
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M++ + PD + ++ + + + +++L E +H + G++ V + N I Y K G
Sbjct: 143 EMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 125 KIGKALQVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
+ A VFE + +++V++W +M ++ G +A ++ M R KP+ TFI +
Sbjct: 203 DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINL 262
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
++C + + G R + G + IE I + ++ A +LL +
Sbjct: 263 AASCQNPETLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA-RLLFDIMTSR 320
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIK 272
W +++ GD++ +IK
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIK 350
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 12/237 (5%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 88
R L+ + +V +W I + P E++ LFR M+ +P+ ACA+L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
V E +H ++ + + V + A +DM+ K + A +VFE M + TW M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+G G +A +F M + P+ +T + ++ + ++L + + R G+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMHAVGIRLGV 184
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA------NAAIWGSLLAASNIYGD 259
+ ++ I G+ G L A ++ FEA W S+ A +++G+
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSA-----KLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 214/350 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V YA+ G + A + FE M K+ I+ L++G+AQ EA+ +F RM V
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++ALSA A L ++ G+ IH + + G + + NALI +Y K G A
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP A+A +W +LL
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++RK+MRD GV+K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
PG S+IEV VH F GD HP +++Y L IN ++ + Q ++
Sbjct: 784 EPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 141/241 (58%), Gaps = 4/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L AR + E++ EK+V+SWT++IAGY Q + +A+ F+ MQ + PD I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A+S CA + A+ G IH I G + V + NAL+++YA+ G+I +A FE M+
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K IT +++G A GL EAL +F RM+++ VK N TF++ LSA ++ ++ G++
Sbjct: 510 KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K+ + E ++ +I L G+ G ++A+ M E N W +++ + + +
Sbjct: 570 HARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Query: 258 G 258
G
Sbjct: 627 G 627
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G A +F M ++ +++ TLI+G+AQ A+ +F MQ +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA LG ++ G +H+Y+ + G+++ + +L+D+Y K G + AL +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +V+ W M+ ++ ++F +M+ A ++PN+ T+ IL C +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG + + + + G E + G +ID+ + G+L++A ++L M E + W S++A
Sbjct: 362 DLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
Query: 253 A 253
Sbjct: 420 G 420
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F NV+ W ++ + Q++ ++ LF +MQ ++P++
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C ++LGE IH+ + G + + ++ LIDMY+K G + KA +V E +K
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K V++WT+MIAG H ++AL F M++ + P+ I + +S C + + G +
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+ I S Y + I + +++L R G ++EA
Sbjct: 469 HARIYVSGYSGDVSI--WNALVNLYARCGRIREA 500
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G + AR +FE ++ ++ +SW +++GYAQ EA+ L+R+M V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LS+C + G IH ++G + + + NA+I +Y + G A +V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M ++ +T+ T+I+G A G G AL++F M+ + + P+ +T ++L+AC +G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + + + + GI G ++DL + G ++ A + N +W +L
Sbjct: 261 QKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLV 318
Query: 253 A 253
A
Sbjct: 319 A 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 93
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMP 239
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 213/340 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+V YA+ G A +LF + K+ I+W LI+G+ Q +A+ +F +M
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA 544
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++A+SA A L ++ G+ +H + G + + NALI +Y K G I A
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M + YG+ P + Y C++D+LGRAG L A + + MP ANA IW +LL
Sbjct: 665 VEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ G+W ++RK+M+D G++K
Sbjct: 725 SACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PG S+IEV VH F GD HP D++Y+ L ++N ++
Sbjct: 785 EPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 131/240 (54%), Gaps = 2/240 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K L+ AR + E++ +++V+SWT++IAGY Q D EA+ F+ MQ V PD I +
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A SACA + A+ G IH + G + + N L+++YA+ G+ +A +F + +
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDH 510
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K ITW +I+G L +AL +F +M +A K N TFI+ +SA ++ ++ G++
Sbjct: 511 KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + E +I L G+ G +++A+ + M N W +++ + + +G
Sbjct: 571 HG-RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHG 628
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 8/273 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F L NV+ W ++ Y Q+ ++ +F +MQ + P++
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTY 349
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C G +ELGE IH+ + G + + ++ LIDMY+K + KA ++ E ++
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEK 409
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ V++WT+MIAG H EAL F M+ V P+ I + SAC + + G +
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + S Y + I + +++L R G +EA L R + + + W L++ +
Sbjct: 470 HARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG---F 523
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAI 290
G L E AL +K+ Y + + I AI
Sbjct: 524 GQSRLYEQALMVFMKMS-QAGAKYNVFTFISAI 555
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y G A +F M + +++ TLI+G+AQ A+ +F MQ+ ++
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA +G ++ G+ +H+Y+ + G++ +L+D+Y K G I A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +V+ W M+ ++ ++F +M+ + PN+ T+ IL C G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELG + + + + G E + G +ID+ + L +A K+L + + + W S++A
Sbjct: 363 ELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIA 420
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +F+ ++ ++ +SW +++GYAQ EA L+ +M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LSAC + G IH + + + + NALI +Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M +T+ T+I+G A G G AL +F M+ + ++P+ +T ++L+AC VG +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G++ + + + G+ G ++DL + G ++ A + + N +W +L
Sbjct: 262 QKGKQLHSYLL-KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLV 319
Query: 253 ASNIYGDV 260
A YG +
Sbjct: 320 A---YGQI 324
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 47 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-----IHNYI 101
+A + D P + ++L + + AL AC G W IH
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRG----NRWPLVLEIHATS 69
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
GL + N LID+YAK+G + +A QVF+ + ++ ++W M++G A GLG+EA
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAF 129
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 220
++S+M V P ++LSAC L GR + + K + E + +I
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIA 187
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
L G + AE++ M F + + +L++ G GECALQ
Sbjct: 188 LYLGFGSFKLAERVFCDMLF-CDRVTFNTLISGHAQCGH---GECALQ 231
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 205/342 (59%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+ GD A + FE M ++++SW + A YAQ EA+ LFR MQ+E VK
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVK 736
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ L+ V G+ H + GL++ V + L+ +YAK GK+ +A+ +
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISL 796
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +V+ +I LA HG EA+ MF +M++ V+P+ T ++I+SAC H G+V
Sbjct: 797 FRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMV 856
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G F MK +GI P +E Y C +DLLGRAG L+ AE+++R+MPFE N +W SLL
Sbjct: 857 EEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ GD ELGE Q +++L+PHNS + +LSNIY G+W ++ RK + D VK
Sbjct: 917 TCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNA 976
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S++E+ K+VHEFVAGD SHP D +Y +L K+ M+ A
Sbjct: 977 PGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRA 1018
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ + + +L AR++F+ M +V+SWT +++ A+ E LFRRMQ+E V
Sbjct: 576 TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVI 635
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L C + LG+ IH + + GL + + NAL++MY+ G +AL
Sbjct: 636 PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE MK + +++W M A A GL +EA+ +F M+ VKP+++TF L+ LV
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
G + F+ + + G++ + ++ L + G L EA L R
Sbjct: 756 SDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFR 798
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ--PNEAITLFRRMQVEN 70
N M+ YAK G +A A+F + EK+V+SWT + YAQ + P+ A+ +FR M ++
Sbjct: 170 NAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPD-ALRIFREMLLQP 228
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+ I + AL AC L G W+H+ + + GL NALI+MY K G A
Sbjct: 229 LAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAY 285
Query: 131 QVFENMKNK---SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
VF+ M ++ +++W MI+ G +A+ +F R+ ++PN +T I IL+A
Sbjct: 286 GVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA 345
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
G+ R F+ G + +I + + G+ A + RR+ ++ + W
Sbjct: 346 ASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISW 405
Query: 248 GSLLAAS 254
++L AS
Sbjct: 406 NTMLGAS 412
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 130/248 (52%), Gaps = 8/248 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT---EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
N ++ Y K GD A +F+ M E +++SW +I+ + + +A+ +FRR+++E
Sbjct: 269 NALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Query: 70 NVKPDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++P+ + ++ L+A A G V+ G H I + G V + NA+I MYAK G
Sbjct: 329 GMRPNSVTLITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFS 387
Query: 128 KALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VF ++ K VI+W TM+ + ++ F M A + PN+++FIAIL+AC
Sbjct: 388 AAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNAC 447
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ ++ GR+ +++ +R + ++ + G+ G + EAE + + MP + + +
Sbjct: 448 SNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLV 507
Query: 247 -WGSLLAA 253
W +L A
Sbjct: 508 TWNVMLGA 515
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N ++ Y + G L A A+F M E+NV+SWT LI+ AQ A LFR M +E +
Sbjct: 64 NCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSA 123
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL----NTIVPLNNALIDMYAKSGKIG 127
P+ ++A L+ACA + +G IH I + GL T + NA+I+MYAK G
Sbjct: 124 APNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPE 183
Query: 128 KALQVFENMKNKSVITWTTMIAGLAL-HGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A+ VF + K V++WT M A +AL +F M + PN ITFI L AC
Sbjct: 184 DAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC 243
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF--EANA 244
L + + + ++ G +P +I++ G+ G + A + + M E +
Sbjct: 244 --TSLRDGTWLHSLLHEAGLGFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDL 299
Query: 245 AIWGSLLAAS 254
W ++++AS
Sbjct: 300 VSWNAMISAS 309
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 123/253 (48%), Gaps = 24/253 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +++ YAK G + A +F + K +VISW T++ + + F M + +
Sbjct: 374 NAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIG 127
P++++ +A L+AC+ A++ G IH+ I Y +++ + L+ MY K G I
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKCGSIA 490
Query: 128 KALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+A VF+ M ++S++TW M+ A + +EA M + V P+ ++F ++LS+
Sbjct: 491 EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSS 550
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFE 241
C ++ R I++S Y + C +I + GR L++A + M
Sbjct: 551 CYCSQEAQVLR--MCILESGY-------RSACLETALISMHGRCRELEQARSVFDEMD-H 600
Query: 242 ANAAIWGSLLAAS 254
+ W ++++A+
Sbjct: 601 GDVVSWTAMVSAT 613
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V+ Y K G + A +F+ M +++++W ++ YAQ D+ EA M V
Sbjct: 479 LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++ + LS+C + + + I + G + L ALI M+ + ++ +A V
Sbjct: 539 PDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCRELEQARSV 594
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V++WT M++ A + +E +F RM+ V P++ T L C +
Sbjct: 595 FDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTL 654
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
LG + + + G+E I ++++ G +EA M
Sbjct: 655 GLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
A L +C + G+ H I GL + L N LI+MY + G + +A +F M+ +
Sbjct: 30 ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V++WT +I+ A G A +F M + PN T +A+L+AC + + +GR
Sbjct: 90 NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS- 148
Query: 199 FNIMKSRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ M G+E + MI++ + G ++A + +P E + W ++ A
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP-EKDVVSWTAMAGA 206
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 207/313 (66%), Gaps = 6/313 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G K ++++AR LF+ TEK+V++W +I+GY P EA+++F+ M+
Sbjct: 212 WNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGE 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKI 126
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 272 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 331
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+A++VF MK++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 332 DRAIEVFRGMKDRDLSTWNTLIVGLALHH-AEGSVEMFEEMQRLKVWPNEVTFIGVILAC 390
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +
Sbjct: 391 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIV 450
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 451 WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Query: 307 MGVKKMPGCSYIE 319
VKK G S IE
Sbjct: 511 TRVKKPTGISLIE 523
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 60/307 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ +A GDL A LF+ + + ++W+++ +GYA+ + +EA+ LF M
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP----D 206
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++A ++ C K ++ A ++
Sbjct: 207 KDQVAWNVMITGC-----------------------------------LKCREMDSAREL 231
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ K V+TW MI+G G +EAL +F M A P+ +T +++LSAC +G +
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 193 ELGRRYFNIMKSRYGIEPKI----EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+R + + I + +ID+ + G + A ++ R M + + + W
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMK-DRDLSTWN 350
Query: 249 SL---LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL-----GRWNESGKI 300
+L LA + G VE+ E +Q L K+ P+ ++ I IL GR +E K
Sbjct: 351 TLIVGLALHHAEGSVEMFE-EMQRL-KVWPNE------VTFIGVILACSHSGRVDEGRKY 402
Query: 301 RKVMRDM 307
+MRDM
Sbjct: 403 FSLMRDM 409
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L A LFE + + +V ++ G AQ +P + + L+ M+ V PD L
Sbjct: 60 GALKYAHKLFEEIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVL 119
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC++L G IH + ++G + NALI +A G +G A ++F++ +
Sbjct: 120 KACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W++M +G A G EA+ +F M +++ + +++ C ++ R F+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMP----DKDQVAWNVMITGCLKCREMDSARELFD-- 233
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASNIYGD 259
R+ E + + MI GY +EA + + M + SLL+A + GD
Sbjct: 234 --RF-TEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 260 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 295
+E G+ H+ LE ++ S+IY WN
Sbjct: 291 LETGK--RLHIYILE-----TASVSSSIYVGTPIWN 319
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK GD+ AR LF+ + E++V+SW +I+GY + A+ LF +MQ
Sbjct: 212 WNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G +++G+ +H+ + + + N V L NALIDMYAK G + A
Sbjct: 272 KPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSA 331
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF +M++K V TW +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H
Sbjct: 332 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 391
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ GR +FN+M+ +Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +
Sbjct: 392 GMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 451
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A ++G++EL + A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV
Sbjct: 452 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 511
Query: 310 KKMPGCSYIEVS 321
K G ++++ S
Sbjct: 512 NKEAGQTFVDGS 523
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 72/307 (23%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAM 78
G + +A +F+ + + + TLI G A P +A++L+ RM V+PD++
Sbjct: 56 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 115
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC +GA + G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 116 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 175
Query: 139 KSVITWTTMIAGLALHG----------------------------------LGREALD-- 162
+ + W+ MI G A G L RE D
Sbjct: 176 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 235
Query: 163 --------------------------MFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+F +M+R KP+ +T +++LSAC G +++G+
Sbjct: 236 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 295
Query: 197 RY---FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
R + M SR G + +ID+ + G ++ A ++ M + + + W S++
Sbjct: 296 RLHSSLSDMFSRNGFPVVLGN--ALIDMYAKCGSMKSAHEVFWSMR-DKDVSTWNSIVGG 352
Query: 254 SNIYGDV 260
++G V
Sbjct: 353 LALHGHV 359
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
MF+ + N ++ YAK G + +A +F M +K+V +W +++ G A E+I
Sbjct: 304 MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESI 363
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDM 119
+F +M V+PDEI +A L AC+ G V+ G N ++ +Y + + ++DM
Sbjct: 364 DMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDM 423
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A + + MK + + W T+++ +HG
Sbjct: 424 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 460
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----ERARVKPNE 176
A G I A VF+ + + T+I G A R+A+ +++RM V+P++
Sbjct: 53 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 112
Query: 177 ITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF +L AC +G + G + + +++K+ G E +I + G L A L
Sbjct: 113 LTFPFVLRACTAMGAGDTGVQVHAHVVKA--GCESDAFVKNALIGMHASCGNLGIAAALF 170
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVE-----LGECALQHLI 271
E +A W +++ GD+ EC ++ L+
Sbjct: 171 DGRARE-DAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 210
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 210/332 (63%), Gaps = 1/332 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD AR +F++M ++VI+WT +I GY Q Q +EA+ LFR M +
Sbjct: 551 FTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGP 610
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LSACA L ++ G+ IH + V ++NA+I +YA+SG + A +
Sbjct: 611 EPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARR 670
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ + K ITWT+MI +A HGLG +A+ +F M R VKP+ IT++ +LSAC H G
Sbjct: 671 VFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAG 730
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V+ G+RY+ M++ +GI P++ Y CM+DL RAG L EA + ++RMP + +WGSL
Sbjct: 731 FVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSL 790
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA + + +L E A L+ ++PHNSG Y+ L+N+Y+ GRWN++ +I K+ +D GVK
Sbjct: 791 LAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVK 850
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
K G S+ V +VH F A D HP D +Y+
Sbjct: 851 KETGFSWTHVRGKVHVFGADDVLHPQRDSIYR 882
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 33/256 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ YAK G L +A +F M +++ +SWT +I G + + +A+ F M E
Sbjct: 284 WNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGF 343
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--------- 122
P + + LS+CA + A +G +H ++ + GL++ VP+ N+++ MY K
Sbjct: 344 APSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 123 ----------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
G++ A+ +FENM +S+++W T+IAG +GL A
Sbjct: 404 VFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMA 463
Query: 161 LDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
L FSRM A ++P+ T ++LSAC ++ ++++G++ + + R G+ + +I
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYIL-RTGMPCSSQIMNALI 522
Query: 220 DLLGRAGYLQEAEKLL 235
++G ++ A +++
Sbjct: 523 STYAKSGSVETARRIM 538
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 217/334 (64%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G +++A +F+ M E+++ISWT +I G+ + EA+ FR MQV V
Sbjct: 132 WNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGV 191
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A++AAL+ACA LGA+ G W+H ++ V ++N+LID+Y + G + A Q
Sbjct: 192 KPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 251
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F RM+ R KP+ +TF L+AC HVGL
Sbjct: 252 VFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGL 311
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G RYF MK Y I P+IE YGC++DL RAG L+EA K++ MP + N + GSLL
Sbjct: 312 VEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLL 371
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G D EL E ++ L +L+ NY ILSN+YA G+W + K+R+ M+ +G+K
Sbjct: 372 AACRTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLK 431
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PG S IE+ R H F+AGD++H + + ++L
Sbjct: 432 KQPGFSSIEIDDRTHVFMAGDSAHVENGYIREVL 465
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 81/342 (23%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 95
T + +SWT+ I ++ + EA F M++ V+P+ I ++A LS CA G+
Sbjct: 25 TSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEP--FGD 82
Query: 96 WIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA----- 149
+H Y + GL+ V + A++ MY+K + KA VF+ +++K+ +TW TMI
Sbjct: 83 SLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRS 142
Query: 150 --------------------------GLALHGLGREALDMFSRMERARVKPNEIT----- 178
G GL EAL F M+ + VKP+ +
Sbjct: 143 GRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAAL 202
Query: 179 -----------------FI-------------AILSACCHVGLVELGRRYFNIMKSRYGI 208
F+ +++ C G VE R+ F+ M+ R
Sbjct: 203 AACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKR--- 259
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIYGDVELGEC 265
+ + +I G+ E+ RRM F+ +A + L A + G VE G
Sbjct: 260 --TVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVR 317
Query: 266 ---ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
A++ ++ P +Y L ++Y+ GR E+ K+ + M
Sbjct: 318 YFEAMKRDYRISPRIE-HYGCLVDLYSRAGRLEEALKVVESM 358
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 30/153 (19%)
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC- 186
K Q +++ ++WT+ I L+ +G EA F+ M A V+PN IT IA+LS C
Sbjct: 16 KLHQKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCA 75
Query: 187 -------------CHVGL----VELG---------RRYFNIMKSRYG-IEPKIE-QYGCM 218
C +GL V +G RR F + + +E K + M
Sbjct: 76 DCEPFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTM 135
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ID R+G + +A K+ MP E + W +++
Sbjct: 136 IDGYMRSGRVDDAAKVFDEMP-ERDLISWTAMI 167
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 224/348 (64%), Gaps = 2/348 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y G++ A+ LF+ M E++V+SW+T+IAGY Q+ EA+ F +M V
Sbjct: 347 WNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEV 406
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E M++AL+AC+ L A++ G+WIH YI + + L +LIDMYAK G+I A
Sbjct: 407 KPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASS 466
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF K + V W MI G A+HG EA+++F +M+ +V PN++TFIA+L+AC H
Sbjct: 467 VFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGY 526
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+V+ G+ YF +M S YGI P+IE YGCM+DLL R+G+L+++E+++ MP + AIWG+L
Sbjct: 527 MVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGAL 586
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR-KVMRDMGV 309
L A IY D+E G + + +++P++ G +L NIY+ GRWNE+ +R K +
Sbjct: 587 LNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDR 646
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
KK+PG S IE++ HEF+ GD SHP +Y L ++ ++K A ++
Sbjct: 647 KKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYV 694
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRM-QVENVKPDEIAML 79
+ L A LF+ + + ++ + T+I ++ ++I +FR + + P+ + +
Sbjct: 223 LASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFV 282
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN---- 135
A AC V GE + + + GL+ V + NALI M+ K G++ A VF++
Sbjct: 283 FAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDR 342
Query: 136 ---------------------------MKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
M + V++W+T+IAG G EALD F +M
Sbjct: 343 DFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKML 402
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
++ VKPNE T ++ L+AC ++ ++ G ++ ++ R I+ +ID+ + G +
Sbjct: 403 QSEVKPNEYTMVSALAACSNLVALDQG-KWIHVYIRRDNIKMNDRLLASLIDMYAKCGEI 461
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
A + + W +++ ++G E
Sbjct: 462 DSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPE 494
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 223/357 (62%), Gaps = 5/357 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K ++ A +FE T ++++++T++I Y+Q EA+ L+ +MQ ++K
Sbjct: 424 NSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK 483
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + L+ACA L A E G+ +H + ++G + +N+L++MYAK G I A +
Sbjct: 484 PDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRA 543
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N+ +++W+ MI G A HG G+EAL +F++M R V PN IT +++L AC H GLV
Sbjct: 544 FSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLV 603
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++YF M+ +GI+P E Y CMIDLLGR+G L EA +L+ +PFEA+ +WG+LL
Sbjct: 604 NEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A+ I+ ++ELG+ A + L LEP SG + +L+NIYA G W K+RK M+D VKK
Sbjct: 664 AARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKE 723
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
PG S+IE+ +V+ F+ GD SH D +Y L ++ + A +S ++E D+
Sbjct: 724 PGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKA-----GYSSIVEIDI 775
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 2/247 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK G L+++R LF + E+NV+SW L + Y Q + EA+ LF+ M +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E ++ L+ACA L +LG IH + + GL+ NAL+DMY+K+G+I A+ V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+++ + V++W +IAG LH AL + M+ + +PN T + L AC +G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELGR+ + + G ++D+ + + +A + MP + + W +L++
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALIS 358
Query: 253 ASNIYGD 259
+ GD
Sbjct: 359 GYSQCGD 365
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K +++AR ++ M +K++I+W LI+GY+Q +A++LF +M E++ +
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + L + A L A+++ + IH + G+ + + N+L+D Y K I +A ++FE
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFE 444
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ ++ +T+MI + +G G EAL ++ +M+ A +KP+ ++L+AC ++ E
Sbjct: 445 ERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQ 504
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
G++ ++ ++G I ++++ + G +++A++ +P
Sbjct: 505 GKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP 548
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 135/262 (51%), Gaps = 5/262 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K G++ A A+F+ + +V+SW +IAG D + A+ L M+ +
Sbjct: 222 NALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR 281
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +AL ACA +G ELG +H+ + + ++ + L+DMY+K + A +
Sbjct: 282 PNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRA 341
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+++M K +I W +I+G + G +A+ +FS+M + N+ T +L + + +
Sbjct: 342 YDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAI 401
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
++ ++ I + GI ++D G+ ++ EA K+ +E A + S++
Sbjct: 402 KVCKQIHTI-SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVA-YTSMIT 459
Query: 253 ASNIYGDVELGECALQHLIKLE 274
A + YGD GE AL+ ++++
Sbjct: 460 AYSQYGD---GEEALKLYLQMQ 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K AR L + +E +V+SW++L++GY Q EA+ +F M + VK
Sbjct: 20 NHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVK 79
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+E + L AC+ + +G +H G + + N L+ MYAK G + + ++
Sbjct: 80 CNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRL 139
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + ++V++W + + L EA+ +F M R+ + PNE + IL+AC +
Sbjct: 140 FGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEG 199
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR+ +M + G++ ++D+ +AG ++ A + + + + W +++A
Sbjct: 200 DLGRKIHGLML-KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIA 257
Query: 253 ASNIY 257
++
Sbjct: 258 GCVLH 262
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 18/252 (7%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H ++ ++G + L N L+ +Y+K + G A ++ + V++W+++++G +G
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
EAL +F+ M VK NE TF ++L AC + +GR+ M G E
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHG-MAVVTGFESDGFVAN 121
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL-GECA--LQHLIK- 272
++ + + G L ++ +L + E N W +L + Y EL GE + +++
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFSC---YVQSELCGEAVGLFKEMVRS 177
Query: 273 -LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG--VKKMPGCSYIEVSKRVHEF-- 327
+ P N + +I+ N A L + KI +M MG + + + +++ + E
Sbjct: 178 GIMP-NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEG 236
Query: 328 ---VAGDTSHPD 336
V D +HPD
Sbjct: 237 AVAVFQDIAHPD 248
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 215/343 (62%), Gaps = 37/343 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++G+ K G++ A LF M ++V+SW +++A YAQ +PNEA+ LF +MQ
Sbjct: 9 WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMQA--- 65
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
G+N+IV AL+DMYAK GKI A Q
Sbjct: 66 --------------------------------VGVNSIV--GTALVDMYAKCGKISLATQ 91
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M++K V+ W T+IAG+A+ G +EA +F M+ A V+PN+ITF+A+LSAC H G+
Sbjct: 92 VFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGM 151
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G++ + M S YGIEPK+E YGC+IDLL RAG L+EA +L+ MP E N G+LL
Sbjct: 152 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALL 211
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+ K
Sbjct: 212 EGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 271
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 272 VPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 314
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 212/326 (65%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K +++AR F+ M++++V++W+T+IAGYAQ +P E++ LF RM+ + +P+E+ +
Sbjct: 246 YVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTL 305
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +SACAQLG+ EL E I NY E L L +ALIDMY + G +G+A VF M+
Sbjct: 306 VGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQ 365
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K VITW +MI GLA++G +A+ ++ +M V+PNEITF+A+L+AC H GLV+ G +
Sbjct: 366 KGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAF 425
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F MK + + P++E C++DLL ++G L EA K + M E NA IW +LL++ +
Sbjct: 426 FEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHA 485
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
DVEL + A + L+ +EP NS Y +LSNIYA G W ++ +IR +MR V+K+ S+I
Sbjct: 486 DVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWI 545
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
++ VH+F+ DT HP +Y ++
Sbjct: 546 KLDGEVHKFLVQDTYHPRSAEIYDVI 571
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 134/240 (55%), Gaps = 5/240 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ GY+K GD++ AR LF+ M + SW ++IA YA + EA+ LF RM E +
Sbjct: 140 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGAR 199
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + + S CA+ G ++ G+ + + I + L ++ ++ AL++MY K I A +
Sbjct: 200 PNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVI-VHTALMEMYVKCRAIDDARRE 258
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V+ W+TMIAG A +G E+L++F RM+ +PNE+T + ++SAC +G
Sbjct: 259 FDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSD 318
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
EL + N +++ P G +ID+ R G++ A + RM + W S++
Sbjct: 319 ELVEQIGNYAENQR--LPLTSYLGSALIDMYTRCGHVGRARSVFSRME-QKGVITWNSMI 375
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y + G + AR++F M +K VI+W ++I G A +AI+L+ +M V+
Sbjct: 341 SALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQ 400
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+EI +A L+AC G V+ G + ++ ++ V ++D+ KSG + +A +
Sbjct: 401 PNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYK 460
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+M+ + + WTT+++ H E + SR A N ++ + + G
Sbjct: 461 FICDMEVEPNAVIWTTLLSSCRAHA-DVELAKLASRKLLAMEPDNSSIYVLLSNIYADAG 519
Query: 191 LVELGRRYFNIMKSR 205
L R ++M+S+
Sbjct: 520 LWGDAREIRDLMRSK 534
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 31/206 (15%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ + +T ++ ++ ++ + F M + + +CA
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA-------------------------- 121
+ G +H + GL V + AL+D YA
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCL 142
Query: 122 -----KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
K+G + KA ++F+ M+ ++ +W +MIA A G REAL +F RM +PN
Sbjct: 143 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNA 202
Query: 177 ITFIAILSACCHVGLVELGRRYFNIM 202
IT ++ S C G ++ G+R +++
Sbjct: 203 ITITSVFSICAKSGDLDTGKRVRDLI 228
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 216/341 (63%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
N ++ Y G L+ A +FE M E++++SW+++IA +A+ EA+ LF+RMQ V V
Sbjct: 123 NGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTV 182
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE+ +L+ +SA + LG +ELG+WI +I + GL V L AL+DM+++ G I ++++
Sbjct: 183 KPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMR 242
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++V+TWT +I GLA+HG EAL MF M +P+ +TF +L AC H GL
Sbjct: 243 VFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGL 302
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F +++ YG+EP E YGCM+DLLGRAG L EA K + MP N+ IW +LL
Sbjct: 303 VSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLL 362
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +EL E + + +L+ ++ G+Y +LSN+Y +GRW E +R MR+ + K
Sbjct: 363 GACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISK 422
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS I V+ +HEFVAGD +HP F+ + + L + +K
Sbjct: 423 KPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLK 463
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 125/235 (53%), Gaps = 7/235 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ AR++F+L+ + ++ T+I +A +M + V PD L A
Sbjct: 38 LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLF-SKMAMAGVSPDHFTFPFVLKA 96
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA+L + G +H+ + + G ++ V + N LI Y G + AL+VFE M + +++W
Sbjct: 97 CARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSW 153
Query: 145 TTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
++MIA A +G G EAL +F RM+ VKP+E+ ++++SA +G +ELG ++
Sbjct: 154 SSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG-KWIRGFI 212
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
SR G+E + ++D+ R G ++E+ ++ M E N W +L+ ++G
Sbjct: 213 SRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMG-ERNVLTWTALINGLAVHG 266
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 216/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY K G ++ AR+LF+ M +++I++ +++ GY Q EA+ LF M+ ++
Sbjct: 309 WNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D ++ L+ACA LGA++ G +H IEQ + + L AL+DMY K G++ +A
Sbjct: 369 RVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATI 428
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + V TWT MIAGLA +G+G+ AL+ F +M +PN +++IA+L+AC H L
Sbjct: 429 VFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCL 488
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GR YF+ M+ Y I P+IE YGCMIDLLGR+G L EA L++ MP + NA IW S+L
Sbjct: 489 LNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASIL 548
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++L +CA +HL+KLEP G Y L NIY +W + KIR +M + VKK
Sbjct: 549 SACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKK 608
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S I V+ +VH+FV D SHP + +L +I+ ++K
Sbjct: 609 TAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 649
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 42/311 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++G AK+G L + + L ++VISWT+LIA Y++ ++ EA+ F+ M +
Sbjct: 176 WTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGI 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ ++A LSACA+L +ELG +H +E+ G+ T L ALIDMYAK G G A Q
Sbjct: 236 APDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQ 295
Query: 132 V--------------------------------FENMKNKSVITWTTMIAGLALHGLGRE 159
V F+ M+ + +IT+ +M+ G G RE
Sbjct: 296 VFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLRE 355
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F M R ++ + T + +L+AC +G ++ GR ++ R +E I ++
Sbjct: 356 ALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLGTALL 414
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL-----E 274
D+ + G + EA + +RM + + W +++A G +G+ AL+H ++ +
Sbjct: 415 DMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIAGLAFNG---MGKAALEHFYQMRCDGFQ 470
Query: 275 PHNSGNYAILS 285
P++ A+L+
Sbjct: 471 PNSVSYIAVLT 481
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 38/276 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A LF+ M + T L A P+ LFRRM+ V+PD L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFT-FHFLFK 111
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVP-----LNNALIDMYAKSGKIGKALQVFENMKNK 139
C+ + + + L T++P ++N+LI MY + G A + F+ + K
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 140 SVITWTTMIAGLALHGL-------------------------------GREALDMFSRME 168
+ WT +I+GLA G+ REA+ F M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ P+E+T IA+LSAC + +ELGR +++ G+ +ID+ + G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRS-LHLLVEEKGMPTSENLVVALIDMYAKCGDF 290
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
A+++ + W +++ +G V++
Sbjct: 291 GHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 216/343 (62%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ V
Sbjct: 140 WNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGV 199
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD +A++AAL+AC LGA+ G W H Y+ V ++N+LID+Y + G + A Q
Sbjct: 200 NPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQ 259
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ KP+ +TF L+AC HVGL
Sbjct: 260 VFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 319
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +YF +MK+ Y I P+IE +GC++DL RAG L++A K++ MP + N + GSLL
Sbjct: 320 VEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLL 379
Query: 252 AASNIYGD-VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G+ L E ++H+ L+ NY ILSN+YA G+W + K+R+ M+ +G+K
Sbjct: 380 AACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 439
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PG S IE+ H F+AGD +H + + ++L I+ ++
Sbjct: 440 KQPGYSSIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDLRL 482
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 42/253 (16%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + ++SWT+ I ++ D+ EA F M++ ++P+ I ++ LSAC G+ L
Sbjct: 29 TSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEAL 88
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT------ 146
+ +H Y + GL+ + V + A++ MY+K G + KA VF+ M++K+ +TW T
Sbjct: 89 SDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYM 148
Query: 147 -------------------------MIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
MI G G EAL F M+ + V P+ + IA
Sbjct: 149 RNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIA 208
Query: 182 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
L+AC ++G + G RY R + +IDL R G ++ A ++ M
Sbjct: 209 ALAACTNLGALSFGLWAHRYVVSQDFRNNVRVS----NSLIDLYCRCGCVEFARQVFDTM 264
Query: 239 PFEANAAIWGSLL 251
+ W S++
Sbjct: 265 E-KRTVVSWNSVI 276
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 44/173 (25%)
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
+ + + +Q ++++++WT+ I L+ EA FS M A ++PN IT
Sbjct: 11 LTTRKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHIT 70
Query: 179 FIAILSAC------------------CHVGL--------------------VELGRRYFN 200
FI++LSAC C +GL V R F+
Sbjct: 71 FISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFD 130
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
M+ + + + MID R G + A K+ MP E + W +++
Sbjct: 131 YMEDKNSV-----TWNTMIDGYMRNGQVDNAVKVFDEMP-ERDLISWTAMITG 177
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 217/341 (63%), Gaps = 6/341 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y++ G+L NA +F+ M +++ W+++IAG+AQ +EA+ LF+RM+
Sbjct: 102 SALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFL 161
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + + L AC L +ELG +H ++ +Y + I LNNAL+DMY K G + A V
Sbjct: 162 AQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLI--LNNALLDMYCKCGSLEDANAV 219
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K VI+W+TMIAGLA +G +EAL +F M+ +KPN +T + +L AC H GLV
Sbjct: 220 FVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLV 279
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF+ MK +GI+P E YGCMIDLLGRAG L EA L+ M E +A W +LL
Sbjct: 280 EEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLN 339
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +V++ A + +++L+P ++G Y +LSNIYA RWN+ ++R+ M + G+KK
Sbjct: 340 ACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKE 399
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFD----RLYQILCKING 349
PGCS+IEVSK++H F+ GD SHP +L Q++ K+ G
Sbjct: 400 PGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMG 440
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 139/242 (57%), Gaps = 9/242 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L++A+ +F+ M ++NV+SWTT+I+ Y+ ++A+ M E V+
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L AC G L + +H I + GL++ V + +ALID+Y++ G++ AL+V
Sbjct: 64 PNMFTYSSVLRACD--GLFNLRQ-LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++ W+++IAG A + G EAL +F RM+RA + T ++L AC + L+
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELGR+ + +++K + + ++D+ + G L++A + RM E + W +++
Sbjct: 181 ELGRQVHVHVLK----YDQDLILNNALLDMYCKCGSLEDANAVFVRM-VEKDVISWSTMI 235
Query: 252 AA 253
A
Sbjct: 236 AG 237
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L N LI+MY K G + A VF+ M +++V++WTTMI+ + L +AL+ M R
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+PN T+ ++L AC GL L + + I+K G++ + +ID+ R G L+ A
Sbjct: 62 VRPNMFTYSSVLRAC--DGLFNLRQLHCCIIK--IGLDSDVFVRSALIDVYSRWGELENA 117
Query: 232 EKLLRRMPFEANAAIWGSLLA--ASNIYGD 259
++ M + +W S++A A N GD
Sbjct: 118 LRVFDEM-VTGDLVVWSSIIAGFAQNSDGD 146
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 215/345 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YA G ++ A +F+ M E + SW+T+++GY+Q Q E + L R MQ ENV
Sbjct: 106 NGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVS 165
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + C LG ++LG+W+H+YI++ G+ V L AL+ MY+K G + AL+V
Sbjct: 166 SDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 225
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V TW+ MIAG A+HG +AL +F M+R+++ PN +TF ++LSA H GLV
Sbjct: 226 FQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLV 285
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G + F M + Y I P+I+ YGCM+DL RAG + A K ++ MP E N +W +LL
Sbjct: 286 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 345
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +G LGE + ++KL+P + NY +SN+YA LGRW+ ++R +M++ KK
Sbjct: 346 ACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQ 405
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
G S IE++ VH+F+ G+ SHP +++Y +L ++ ++K H+
Sbjct: 406 HGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHV 450
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 2/239 (0%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G + A +F N+ W T+I GY+ D P AI L++ M + + P+ L
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+AC +L + G+ +H+ I + GL+ PL N LI +YA G + A +F+ M
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W+TM++G + +G E L + M+ V + T +++ C +G+++LG ++ +
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLG-KWVHSY 193
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G++ + ++ + + G L A K+ + M E + W ++A I+G E
Sbjct: 194 IDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTTWSIMIAGYAIHGHDE 251
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 225/335 (67%), Gaps = 2/335 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
W +++ GYAK GDL +AR LF+ M E+N++SW +IAGY+Q QP EA+ LF M V
Sbjct: 322 WTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVG 381
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ P E ++ LSA QLG +E+G+ IH N++ + G+ + L NA++DMYAK G I A
Sbjct: 382 LVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAA 441
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++F +M K++++W +MI+ A +G ++AL +F +M + +KP+ ITFI +LSAC +
Sbjct: 442 AKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYG 501
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G V G+ +F M++ +G+EPK E Y CM+DLL R G L+EA +L+ RMP EA+ WG+
Sbjct: 502 GFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGA 561
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +G+VE+ + A + L++L+P +SG Y++L+NI A +W + +R++MR+ GV
Sbjct: 562 LLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGV 621
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
KK+PG S IE+ + HEF+ DTSH +Y+++
Sbjct: 622 KKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVV 656
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 147/278 (52%), Gaps = 33/278 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L AR +F+ + K+V++WTT+I GYA+ + +EAI LF M +VK
Sbjct: 191 NGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVK 250
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------------- 119
P+E+ M+A LSAC+Q G E+G+ +H +I + + + L NA++DM
Sbjct: 251 PNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREI 310
Query: 120 ------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
YAK+G +G A ++F+ M +++++W MIAG + + EAL
Sbjct: 311 FNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEAL 370
Query: 162 DMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
++F M + + P E T + +LSA +G +E+G+ ++ GI+ + ++D
Sbjct: 371 ELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMD 430
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G + A KL MP E N W S+++A YG
Sbjct: 431 MYAKCGSIDAAAKLFHSMP-EKNLVSWNSMISAYASYG 467
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 8/260 (3%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+F SRLL + GD++ A +F+ N W T+I GY + + P+
Sbjct: 84 IFPASRLL------AFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGF 137
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+ FR+M + D + + AL AC Q +G +H+ I + G ++ + + N LI Y
Sbjct: 138 SFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNY 197
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
++G +G A Q+F+ K V+TWTTMI G A + EA+ +F+ M + VKPNE+T I
Sbjct: 198 VETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMI 257
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
A+LSAC G E+G+ ++ R I + M+D+ + G L A ++ M
Sbjct: 258 ALLSACSQKGDSEMGKTLHEHIR-RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNME- 315
Query: 241 EANAAIWGSLLAASNIYGDV 260
+ W SLL GD+
Sbjct: 316 RRDVFSWTSLLNGYAKNGDL 335
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 215/345 (62%), Gaps = 1/345 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M++GY ++A A+F M+E ++ +W ++ YA+ D P++A++LF +Q + +K
Sbjct: 464 NSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMK 523
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +++ L ACA + +V + H Y+ + N V LN A IDMY+K G + A ++
Sbjct: 524 PDIVTIMSILPACAHMASVHMLRQCHGYVIRACFND-VRLNGAFIDMYSKCGSVFGAYKL 582
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K ++ +T M+ G A+HG+G EAL +FS M VKP+ + A+L AC H GLV
Sbjct: 583 FLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLV 642
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + FN ++ +G +P +EQY C++DLL R G +++A + RMP EANA IWG+LL
Sbjct: 643 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLG 702
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + +VELG HL K+E N GNY ++SN+YA RW+ +IR++MR +KK
Sbjct: 703 ACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKP 762
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
GCS+IEV +R + F+AGD+SHP +Y+ L ++ MK H
Sbjct: 763 AGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQLMKEPFHF 807
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVENV 71
N++++ Y ++G + A LF M ++++SW +IAGYA + +A+ LF + +E +
Sbjct: 225 NSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETI 284
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD + +++ L ACA + +++ + IH YI ++ GL + NAL+ YAK AL
Sbjct: 285 KPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAAL 344
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
Q F + K +I+W ++ G +++ M R ++P+ IT + I+
Sbjct: 345 QTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 397
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 13 NTMVAGYAKVGDL-NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +++ YAK G + ++A A F + K+V+SW +IAG+++ EA LF M +
Sbjct: 119 NALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPI 178
Query: 72 KPDEIAMLAALSACAQL---GAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIG 127
+P+ + + L CA L G+ +H ++ + L V + N+L+ Y + G++
Sbjct: 179 QPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQME 238
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIAILSAC 186
KA +F NMK++ +++W +IAG A +G +AL++FS + +KP+ +T +++L AC
Sbjct: 239 KAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPAC 298
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
HV +++ + + G+ ++ + Y Q A
Sbjct: 299 AHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAA 343
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 14/267 (5%)
Query: 1 MFTLSRLLYKFWNTMVAG----YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQ 55
M L K ++++ G YAK G L+ LF M +++ + W +++G A
Sbjct: 1 MMKLCPFSSKGYDSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSH 60
Query: 56 PNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
E + LFR M + N KP+ + + L CA+L + G+ +H+Y+ + GL + N
Sbjct: 61 EAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGN 119
Query: 115 ALIDMYAKSGKI-GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
ALI MYAK G + A F ++ K V++W +IAG + + EA +F M + ++
Sbjct: 120 ALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQ 179
Query: 174 PNEITFIAILSACCHV---GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
PN T +IL C + G+ + R + + ++ R G +++
Sbjct: 180 PNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEK 239
Query: 231 AEKLLRRMPFEANAAIWGSLLA--ASN 255
AE L R M + W +++A ASN
Sbjct: 240 AEFLFRNMK-SRDLVSWNAIIAGYASN 265
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YAK A F +++ K++ISW ++ + + + L M E ++
Sbjct: 328 NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIR 387
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKA 129
PD I +L + A + V+ + H+Y ++GL + L N ++D YAK G + A
Sbjct: 388 PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYA 447
Query: 130 LQVFENMKNK--------------------------------SVITWTTMIAGLALHGLG 157
+ +F ++ K + TW M+ A +
Sbjct: 448 VNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFP 507
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYG 216
+AL +F ++ +KP+ +T ++IL AC H+ V + R+ + ++++ + + G
Sbjct: 508 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN---DVRLNG 564
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
ID+ + G + A KL P + + ++ +++ ++G +GE AL+
Sbjct: 565 AFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHG---MGEEALR 612
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERA 170
L L+++YAKSG + ++F M + + W +++GLA E + +F M
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 74
Query: 171 -RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL- 228
KPN +T +L C L E + + + G+E +I + + G +
Sbjct: 75 NEAKPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVC 132
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIKLEPHNSGNYAILSN 286
+A R+ F+ + W +++A + + + E A + H + P NYA +++
Sbjct: 133 SDAYAAFNRIEFK-DVVSWNAVIAG---FSENKFTEEAFKLFHAMLKGPIQP-NYATIAS 187
Query: 287 IYAILGRWNESGKIR 301
I + E+ R
Sbjct: 188 ILPVCASLEENAGYR 202
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 214/333 (64%), Gaps = 10/333 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQ---- 67
N +V YAK GD A F M KN+++W T+I+ +A+ + EA+ LFR M
Sbjct: 203 NALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREMLQQQG 262
Query: 68 -VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKSGK 125
+ PD+ +A L ACA+LGA++ G W+H YI + G + + NALIDMYAK G
Sbjct: 263 CTSSPLPDDATFVAVLGACARLGALDAGRWVHAYIVRTGRDAAAGVVGNALIDMYAKCGA 322
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ +A +VF+ M + V T+T+MI+GLA+HG G EAL +F M +ARV+PNE+TF+ +LSA
Sbjct: 323 VEQAAEVFDAMTRRDVYTYTSMISGLAMHGRGEEALALFGDMRQARVRPNEVTFLGVLSA 382
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
CCH G +E G R+F+ M +G+ P IE YGC++D+LGRAG L EAE+L+ MP +A
Sbjct: 383 CCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAGRLDEAEELVSVMPIRPDAI 442
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IWGSLLAA +G V+ E ++ + + E ++G+Y ++SN+YA GR ++ ++R+ MR
Sbjct: 443 IWGSLLAACRAHGHVDRAERVMRRMAEDE-DDAGDYVLMSNMYAQEGRHGKAVQVRRQMR 501
Query: 306 DMGVKKMPGCSYIEVSKRVHEF--VAGDTSHPD 336
V K+PGCS IE+ VHEF V ++ PD
Sbjct: 502 RGKVDKVPGCSLIEIDGVVHEFQAVPANSGEPD 534
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 12/237 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELM---TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ +VA Y G A LF +V+SWT ++ +A++ EA LF M +
Sbjct: 98 DALVALYLACGRRGVASDLFAGAGGGPAPDVVSWTAMVTWHARLGLFREAAELFLAMADD 157
Query: 70 NVKPDEIAMLAALSACAQLGA-VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ AA A + L +H + + G+ V NAL+DMYAK G
Sbjct: 158 GAVVVDAVAAAAAFAACAGAGELVLAREVHRRVLEAGVALDVVACNALVDMYAKCGDSAA 217
Query: 129 ALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMER-----ARVKPNEITFIAI 182
AL+ F M K+++TW TMI+ A G +EAL++F M + + P++ TF+A+
Sbjct: 218 ALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREMLQQQGCTSSPLPDDATFVAV 277
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRM 238
L AC +G ++ G R+ + R G + G +ID+ + G +++A ++ M
Sbjct: 278 LGACARLGALDAG-RWVHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVFDAM 333
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 212/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY G + A++ FE M KN+++ T +I+G AQ +E + LF++M+++
Sbjct: 362 WNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGF 421
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A AL+AC+ LGA+E G +H + G + + + NA+I MYAK G + A
Sbjct: 422 EPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAES 481
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M + +++W +MIA L HG G +A+++F +M + V P+ ITF+ +L+AC H GL
Sbjct: 482 VFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGL 541
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GR YFN M YGI P + Y M+DL RAG A ++ MP + A +W +LL
Sbjct: 542 VEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALL 601
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+++LG A + L KL P N G Y +LSNIYA +GRWN+ K+RK+MRD V+K
Sbjct: 602 AGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRK 661
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS+IEV +VH F+ D HP+ +Y+ L ++ +MK
Sbjct: 662 EPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMK 702
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 37/282 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TM+ GY + DLN AR +FE M E +W +I+GY EA+TL R+M+ +
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGI 285
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAKSGKIG 127
+ D+I +SACA +G+ ++G+ +H YI + LN + ++NALI +Y K+ K+
Sbjct: 286 QFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVD 345
Query: 128 KALQVFENMKNKSVITW-------------------------------TTMIAGLALHGL 156
+A ++F M +++ITW T MI+GLA +G
Sbjct: 346 EARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGF 405
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
G E L +F +M +P + F L+AC +G +E GR+ + G E +
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ-LHAQLVHLGYESSLSVGN 464
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
MI + + G ++ AE + MP + W S++AA +G
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHG 505
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 51/288 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
T++ Y +G+L R +F + ++ + + +I GYA + A+ LFR M+ ++
Sbjct: 83 TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 71 VKPDEIAMLAALSACAQ-LGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAK-SGKIG 127
+PD+ + LSA +G + +H + + G+ + + NAL+ +Y K + ++G
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELG 202
Query: 128 -------KALQVFENMKNKSVITWTTMIAGLALH-------------------------- 154
A ++F+ M + +TWTTMI G +
Sbjct: 203 IPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMIS 262
Query: 155 -----GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 208
G +EAL + +M ++ ++IT+ I+SAC +VG ++G++ + I+K+ +
Sbjct: 263 GYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE--L 320
Query: 209 EPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
P + +I L + + EA K+ MP N W ++L+
Sbjct: 321 NPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILS 367
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 53/297 (17%)
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
R++ E PD IA ++A LG +ELG I N Y +++ NA+I YA +
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV--FYNAMITGYAHN 125
Query: 124 GKIGKALQVFENMKNKSV----ITWTTMIAGLALHGLGREALDMFSRMERARVKPN-EIT 178
G AL++F M+ T+T++++ L L +G E +M A VK
Sbjct: 126 GDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLF-VGNE--QQCGQMHCAVVKTGMGCV 182
Query: 179 FIAILSACCHVGL---VELG---------RRYFNIMKSR---------------YGIEPK 211
++L+A V + ELG R+ F+ M R +
Sbjct: 183 SSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGA 242
Query: 212 IEQYGCMIDLLGRA-----------GYLQEAEKLLRRMPF---EANAAIWGSLLAASNIY 257
E + M++ LG A G QEA L R+M F + + + ++++A
Sbjct: 243 REVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANV 302
Query: 258 GDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
G ++G+ +++K L P++S ++ + + + + N+ + RK+ M V+ +
Sbjct: 303 GSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNI 359
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 215/345 (62%), Gaps = 1/345 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M++GY ++A A+F M+E ++ +W ++ YA+ D P++A++LF +Q + +K
Sbjct: 525 NSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMK 584
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +++ L ACA + +V + H Y+ + N V LN A IDMY+K G + A ++
Sbjct: 585 PDIVTIMSILPACAHMASVHMLRQCHGYVIRACFND-VRLNGAFIDMYSKCGSVFGAYKL 643
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K ++ +T M+ G A+HG+G EAL +FS M VKP+ + A+L AC H GLV
Sbjct: 644 FLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLV 703
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + FN ++ +G +P +EQY C++DLL R G +++A + RMP EANA IWG+LL
Sbjct: 704 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLG 763
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + +VELG HL K+E N GNY ++SN+YA RW+ +IR++MR +KK
Sbjct: 764 ACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKP 823
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
GCS+IEV +R + F+AGD+SHP +Y+ L ++ MK H
Sbjct: 824 AGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQLMKEPFHF 868
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVENV 71
N++++ Y ++G + A LF M ++++SW +IAGYA + +A+ LF + +E +
Sbjct: 286 NSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETI 345
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD + +++ L ACA + +++ + IH YI ++ GL + NAL+ YAK AL
Sbjct: 346 KPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAAL 405
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
Q F + K +I+W ++ G +++ M R ++P+ IT + I+
Sbjct: 406 QTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 458
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 13 NTMVAGYAKVGDL-NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +++ YAK G + ++A A F + K+V+SW +IAG+++ EA LF M +
Sbjct: 180 NALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPI 239
Query: 72 KPDEIAMLAALSACAQL---GAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIG 127
+P+ + + L CA L G+ +H ++ + L V + N+L+ Y + G++
Sbjct: 240 QPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQME 299
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIAILSAC 186
KA +F NMK++ +++W +IAG A +G +AL++FS + +KP+ +T +++L AC
Sbjct: 300 KAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPAC 359
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
HV +++ + + G+ ++ + Y Q A
Sbjct: 360 AHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAA 404
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVEN-VKPDEI 76
YAK G L+ LF M +++ + W +++G A E + LFR M + N KP+ +
Sbjct: 84 YAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSV 143
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-GKALQVFEN 135
+ L CA+L + G+ +H+Y+ + GL + NALI MYAK G + A F
Sbjct: 144 TIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 202
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV---GLV 192
++ K V++W +IAG + + EA +F M + ++PN T +IL C +
Sbjct: 203 IEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGY 262
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ + R + + ++ R G +++AE L R M + W +++A
Sbjct: 263 RYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMK-SRDLVSWNAIIA 321
Query: 253 --ASN 255
ASN
Sbjct: 322 GYASN 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YAK A F +++ K++ISW ++ + + + L M E ++
Sbjct: 389 NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIR 448
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKA 129
PD I +L + A + V+ + H+Y ++GL + L N ++D YAK G + A
Sbjct: 449 PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYA 508
Query: 130 LQVFENMKNK--------------------------------SVITWTTMIAGLALHGLG 157
+ +F ++ K + TW M+ A +
Sbjct: 509 VNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFP 568
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYG 216
+AL +F ++ +KP+ +T ++IL AC H+ V + R+ + ++++ + + G
Sbjct: 569 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN---DVRLNG 625
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
ID+ + G + A KL P + + ++ +++ ++G +GE AL+
Sbjct: 626 AFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHG---MGEEALR 673
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 57 NEAITLF-RRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+EA++LF R++ KP+ + A L +C + A+ G +H Y + G + L
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERA-RV 172
L+++YAKSG + ++F M + + W +++GLA E + +F M
Sbjct: 79 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA 138
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL-QEA 231
KPN +T +L C L E + + + G+E +I + + G + +A
Sbjct: 139 KPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDA 196
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIKLEPHNSGNYAILSNIYA 289
R+ F+ + W +++A + + + E A + H + P NYA +++I
Sbjct: 197 YAAFNRIEFK-DVVSWNAVIAG---FSENKFTEEAFKLFHAMLKGPIQP-NYATIASILP 251
Query: 290 ILGRWNESGKIR 301
+ E+ R
Sbjct: 252 VCASLEENAGYR 263
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 208/338 (61%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K G + A + + +K ++SW +I+G++ + Q +A F RM V PD
Sbjct: 525 LVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPD 584
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
A L CA L V LG+ IH I + L + V + + L+DMY+K G + + +FE
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
N+ +TW M+ G A HGLG EAL +F M+ VKPN TF+++L AC H+GLV+
Sbjct: 645 KAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDK 704
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G YF++M S YG++P+ E Y CM+D+LGR+G + EA L+++MPFEA+A IW +LL+
Sbjct: 705 GLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVC 764
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+G+VE+ E A + L++L+P +S +LSNIYA G W ++RK+MR +KK PG
Sbjct: 765 KIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPG 824
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS+IE+ VH F+ GD HP + +Y+ L + G+M+
Sbjct: 825 CSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQ 862
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N++++GYA G+++ AR F M E++V+SW ++I+G+ Q + ++I +F M V
Sbjct: 118 YNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGV 177
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D ++ L AC L ++G +H + ++G + V +AL+ MYAK ++ +L
Sbjct: 178 GFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLS 237
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + K+ ++W+ MIAG + E L++F M+ V ++ + ++ +C +
Sbjct: 238 VFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSA 297
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ LG+ + + +KS +G + + +D+ + G + +A+K+L MP
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGT--ATLDMYAKCGRMADAQKVLSSMP 344
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 16/280 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A LF++M ++ +SW +IA Q E + F M ++
Sbjct: 422 NAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRME 481
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA A+ G IH I + G+ + AL+DMY K G I KA ++
Sbjct: 482 PDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKI 541
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + K++++W +I+G +L +A FSRM V P+ T+ A+L C ++ V
Sbjct: 542 HDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATV 601
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LG++ + I+K E + + Y C ++D+ + G +Q+++ + + P + W +
Sbjct: 602 GLGKQIHAQIIKQ----ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRDFVTWNA 656
Query: 250 LLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 284
+L +G LGE AL+ L+ ++P+++ ++L
Sbjct: 657 MLCGYAHHG---LGEEALKLFESMQLVNVKPNHATFVSVL 693
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 22/330 (6%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ YAK L+++ ++F + EKN +SW+ +IAG Q D+ E + LF+ MQ V
Sbjct: 220 SALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVG 279
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +CA L A+ LG+ +H++ + + + + A +DMYAK G++ A +V
Sbjct: 280 VSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKV 339
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GL 191
+M S+ ++ +I G A G +AL F + + + +EIT L+AC + G
Sbjct: 340 LSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGD 399
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E GR+ + + I ++D+ G+ L EA L M +A W +++
Sbjct: 400 LE-GRQVHGLAVKSISMS-NICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAII 456
Query: 252 AASNIYGDVELGECALQHLI--KLEPHNSGNYAILSNIYAILGR--WNESGKI--RKVMR 305
AA G+ E +I ++EP ++ S + A GR N +I R +
Sbjct: 457 AACEQNGNEEETLAHFASMIHSRMEPD---DFTYGSVLKACAGRQALNTGMEIHTRIIKS 513
Query: 306 DMGVKKMPG---------CSYIEVSKRVHE 326
MG G C IE + ++H+
Sbjct: 514 GMGFDSFVGAALVDMYCKCGMIEKADKIHD 543
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ +++ +FE ++ ++W ++ GYA EA+ LF MQ+ NVK
Sbjct: 624 STLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVK 683
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ ++ L ACA +G V+ G + + +YGL+ + ++D+ +SG+I +AL
Sbjct: 684 PNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALN 743
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+ + M + W +++ +HG
Sbjct: 744 LVQKMPFEADAVIWRNLLSVCKIHG 768
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 214/341 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ G+ K GD+++AR LF+ + K+VISW +IAGY EA+ L M E VK
Sbjct: 208 TAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVK 267
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++A L+AC+ L + G+ H + L + + +NAL+ MY+K G +G++ V
Sbjct: 268 PDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELV 327
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N++ K +++W T+IA A HG ++ + +F ME + P++ITF+++LSAC HVG+V
Sbjct: 328 FINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMV 387
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + F++M S+Y I P+ E Y C++D+L RAG L++A ++ MP +A +WGSLL
Sbjct: 388 DASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKHMPLKAEKNVWGSLLG 447
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G+V+LGE A + L++ + +SG Y ILSNIYA G W + +IR M++ GVKK
Sbjct: 448 ACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGVKKQ 507
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PG S+ E+ VH FV GD SHP+ ++ L KI+ M+
Sbjct: 508 PGYSWTEIGNEVHMFVGGDASHPEMRKIISELRKISFHMRM 548
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AG ++G + +A+ LF+ M E+NV+S+TT++ A+ + A +F M N+
Sbjct: 114 WNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNL 173
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN-----ALIDMYAKSGKI 126
++ A +S C + G ++E L +P N A+I + K G +
Sbjct: 174 ----VSWAAMISGCVENGM---------FVEARELFEAMPEKNVVACTAMITGHCKQGDV 220
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A ++F+ ++ K VI+W MIAG +G G EA+ + + M R VKP+ T IA+L+AC
Sbjct: 221 DSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTAC 280
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ L+ G+ I + +E I ++ + + G + E+E + + + +
Sbjct: 281 SALALLRQGKSTHAI-AIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTK-DIVS 338
Query: 247 WGSLLAASNIYG 258
W +++AA +G
Sbjct: 339 WNTIIAAYAQHG 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F N ++ Y+K G++ + +F + K+++SW T+IA YAQ + + I LF M+V
Sbjct: 306 SFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVT 365
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ PD+I L+ LSAC +G V+ + + + +Y ++ ++D+ +++G++ K
Sbjct: 366 GLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEK 425
Query: 129 ALQVFENMKNKSVI-TWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
A ++M K+ W +++ +HG LG A M + + P
Sbjct: 426 ASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGP 475
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 117/250 (46%), Gaps = 39/250 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ A+ GD+ AR +F+ MT ++V+SW L+ + + + + RR+ E +
Sbjct: 19 NQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHH--LPAARRLFDEAMP 76
Query: 73 P-DEIAMLAALSACAQLGAVE-------------LGEW---------IHNYIEQYGLNTI 109
D ++ + ++ C G ++ + W + ++ L
Sbjct: 77 SRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDE 136
Query: 110 VPLNN-----ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P N ++D A+ G++ +A +VF++M ++++++W MI+G +G+ EA ++F
Sbjct: 137 MPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELF 196
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + N + A+++ C G V+ RR F+ ++++ + + MI
Sbjct: 197 EAMP----EKNVVACTAMITGHCKQGDVDSARRLFDGIRAK-----DVISWNAMIAGYVH 247
Query: 225 AGYLQEAEKL 234
G+ +EA +L
Sbjct: 248 NGHGEEAMRL 257
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERAR 171
+N I A++G + A +VF+ M ++ V++W ++ AL GR L R+ + A
Sbjct: 18 DNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLT--ALWRAGRHHLPAARRLFDEAM 75
Query: 172 VKPNEITFIAILSAC-CH-------------------------VGLVELGR-----RYFN 200
+ +++ +I++ C H GLV LGR R F+
Sbjct: 76 PSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFD 135
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
M R + Y M+D L R G ++ A ++ MP + N W ++++
Sbjct: 136 EMPER-----NVVSYTTMVDWLARRGEVERAREVFDSMP-DRNLVSWAAMIS 181
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 225/359 (62%), Gaps = 11/359 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA GD +A +FELM ++++++ ++I G+A +P+EA+TLFR M E V+
Sbjct: 169 NSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVE 228
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ LSA A+LGA+ELG +H Y+ + GL + N+L+D+YAK I +
Sbjct: 229 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAIWEX--- 285
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
++ ++WT++I GLA++G G EAL++F ME + P+EITF+ +L AC H G++
Sbjct: 286 -----ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGML 340
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF MK +GI P+IE YGCM+DLL RAG +++A + ++ MP + NA W +LL
Sbjct: 341 DEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLG 400
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G + LGE A HL+KLEP +SG+Y +LSN+Y RW + IR+ M GVKK
Sbjct: 401 ACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKT 460
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
G S +E+ RV+EF G+ SHP +Y +L KI +K + H N + + E +
Sbjct: 461 SGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEE 519
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 13/250 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ A +F ++ NV +W T+ GYA+ D P+ A+ +R+M V ++PD L A
Sbjct: 80 LSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKA 139
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
++ V GE IH+ + G ++V + N+L+ +YA G A VFE M+++ ++
Sbjct: 140 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAX 199
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++I G AL+G EAL +F M V+P+ T +++LSA +G +ELGRR ++
Sbjct: 200 ISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRR-VHVYLL 258
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+ G+ ++DL + + E E+ NA W SL+ + G GE
Sbjct: 259 KVGLRENSHVTNSLLDLYAKCDAIWEXER---------NAVSWTSLIVGLAVNG---FGE 306
Query: 265 CALQHLIKLE 274
AL+ ++E
Sbjct: 307 EALELFREME 316
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 209/340 (61%), Gaps = 4/340 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+++AG+ + GD+ +A +F M + +++SW T+I Q EAI LFR MQ E +
Sbjct: 410 WNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGI 469
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D++ M+ SAC LGA++L +WIH YI++ ++ + L AL+DM+A+ G A+Q
Sbjct: 470 TADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQ 529
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M + V WT I +A+ G G A+++F M + +KP+ + F+A+L+A H GL
Sbjct: 530 VFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGL 589
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G F MK YGI P+ YGCM+DLLGRAG L EA L+ M E N IWGSLL
Sbjct: 590 VEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLL 649
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++ +V++ A + + +L+P +G + +LSNIYA GRW++ K+R +++ G K
Sbjct: 650 AACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHK 709
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDR----LYQILCKI 347
MPG S IE++ ++ EF GD SHP+ L +I C++
Sbjct: 710 MPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRL 749
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 140/249 (56%), Gaps = 2/249 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y + G+++ R +F+ M+E+NV+SWT+LI GYA+ EA++LF M ++
Sbjct: 178 NSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIR 237
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + M+ +SACA+L ++LGE + I + L + NAL+DMY K G I KA ++
Sbjct: 238 PNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKI 297
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ +K+++ + T+++ GL RE L + M + +P+ IT ++ +SAC + V
Sbjct: 298 FDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDV 357
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++ + R G+E +I++ + G + A ++ RM + + W SL+A
Sbjct: 358 SCG-KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVS-WNSLIA 415
Query: 253 ASNIYGDVE 261
GD+E
Sbjct: 416 GFVRNGDME 424
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K G ++ AR +F+ +KN++ + T+++ Y + E + + M +
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I ML+A+SAC++L V G+W H Y+ + GL + NA+I+MY K GK A +V
Sbjct: 339 PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398
Query: 133 FENMKNKSVITWTTMIAGLALHG-------------------------------LGREAL 161
F+ M NK+ ++W ++IAG +G + +EA+
Sbjct: 399 FDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAI 458
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F M+ + +++T + + SAC ++G ++L + +K + I + ++D+
Sbjct: 459 ELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKK-DIHFDMHLGTALVDM 517
Query: 222 LGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
R G Q A ++ +M A A G++ N G +EL + LQ IK
Sbjct: 518 FARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIK 571
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 25 LNNARALFELMTEKNVIS-----WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
L A+ EL E N I +++LI G++ +AI +FR++ PD
Sbjct: 84 LEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFP 143
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
LSAC + A+ G +H I + G + + N+LI Y + G+I +VF+ M +
Sbjct: 144 FVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER 203
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V++WT++I G A G +EA+ +F M ++PN +T + ++SAC + ++LG +
Sbjct: 204 NVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVC 263
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+ +E ++D+ + G + +A K+
Sbjct: 264 TCI-GELELEVNALMVNALVDMYMKCGAIDKARKIF 298
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 221/348 (63%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G++ AR +F+ + K+ ++W LI GYAQ EAI+LF M+ +
Sbjct: 272 SALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGAR 331
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+I ++ LSACA +GA+ELG + Y Q G + V + AL+DMY+K G + +A+QV
Sbjct: 332 PDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQV 391
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGL 191
FE + K+ +W +I GLA +G G+EA+ F M + ++P++ITFI +LSAC H GL
Sbjct: 392 FEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGL 451
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GRR+F+ + S + I PKIE Y CM+DLL RAG+L+EA + ++P + +A + G+LL
Sbjct: 452 LKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEKIPGKPDAVMLGALL 511
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA +VE+ + ++ LEP NS NY + S IYA R ++S ++R +MR+ GV K
Sbjct: 512 AACRKCKNVEVSVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDSARMRGLMRERGVSK 571
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
+PGCS+IEVS RV EF AGD + +YQ+L + +M+ ++ N
Sbjct: 572 IPGCSWIEVSGRVLEFYAGDEPQHGVEDMYQLLDTLVDEMRLEGYVPN 619
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 131/240 (54%), Gaps = 3/240 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
+++V Y+ +G AR +F+ + ++V+SW ++I Y ++A +FR M E V
Sbjct: 170 HSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAV 229
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + L+AC G + LG W+ +++ G+ + +AL+ MY K G++ +A +
Sbjct: 230 PPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARR 289
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + +K + W +I G A +G+ +EA+ +F M +A +P++IT + +LSAC VG
Sbjct: 290 VFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGA 349
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ELG R G + ++D+ + G L A ++ ++P + N A W +L+
Sbjct: 350 LELGTELDRYALQR-GFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCK-NEASWNALI 407
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 55 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 114
+P + L RM ++PD + L A A+ A H +++ GL+ +
Sbjct: 111 RPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAASAHALLQKLGLHNHDHTVH 170
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVK 173
+L+ MY+ G+ A +VF+ + + V++W +MI G+ +A MF M V
Sbjct: 171 SLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVP 230
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
PN +T +L+AC G + LGR +KS G+E ++ + + G + EA +
Sbjct: 231 PNAVTVAVVLAACRDAGDLALGRWLEEWVKS-VGMEVGSLVGSALVGMYEKCGEMAEARR 289
Query: 234 LLRRMPFEANAAIWGSLL 251
+ + + N A W +L+
Sbjct: 290 VFDAIAHKDNVA-WNALI 306
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 227/334 (67%), Gaps = 4/334 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ G AK G+++ +R LF+ M + ++W ++I+GY + + EA+ LFR+MQ E V+
Sbjct: 194 NSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVE 253
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKAL 130
P E M++ LSACA LGA++ GEW+H+Y+++ + LN IV A+IDMY K G I KA+
Sbjct: 254 PSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVL--TAIIDMYCKCGVIVKAI 311
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE + + W ++I GLAL+G R+A++ FS++E + +KP+ ++FI +L+AC ++G
Sbjct: 312 EVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIG 371
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V R YF++M ++Y IEP I+ Y CM+++LG+A L+EAE+L++ MP +A+ IWGSL
Sbjct: 372 AVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSL 431
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ +G+VE+ + A Q + +L P ++ Y ++SN+ A ++ E+ + R +MR+ +
Sbjct: 432 LSSCRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAE 491
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K PGCS IE+ VHEF+AG HP +Y +L
Sbjct: 492 KEPGCSSIELYGEVHEFLAGGRLHPKAREIYYLL 525
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 33/260 (12%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GD+N A LF + N+ W T+I G+++ P+ AI+LF M +V P + +
Sbjct: 72 GDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVF 131
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY---------------------- 120
A AQLGA G +H + + GL + N +I MY
Sbjct: 132 KAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVV 191
Query: 121 ---------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
AK G++ K+ ++F+NM ++ +TW +MI+G + EAL++F +M+ R
Sbjct: 192 ACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGER 251
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+P+E T +++LSAC H+G ++ G + +K R E + +ID+ + G + +A
Sbjct: 252 VEPSEFTMVSLLSACAHLGALKHGEWVHDYVK-RGHFELNVIVLTAIIDMYCKCGVIVKA 310
Query: 232 EKLLRRMPFEANAAIWGSLL 251
++ P + W S++
Sbjct: 311 IEVFEASPTRG-LSCWNSII 329
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 204/311 (65%), Gaps = 1/311 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M++GY K G + +A+ALF++M +K+ +SW+ +IAG +Q +EA+ +F M+ +
Sbjct: 338 WNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEI 397
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD++ +++ +SAC+ L A+E G+ +H YI +Y N + L +LIDMY K G + AL+
Sbjct: 398 KPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALE 457
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVG 190
VF+ ++ K W +I GLA++GL +LDMFS ME PNEITF +LSAC H G
Sbjct: 458 VFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGG 517
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE GR++F +M+++Y I P I YGCM+DLLGRAGY++EAE +++ MP + WG+L
Sbjct: 518 LVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGAL 577
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A +GD E+GE + L+KL+P + G +LSNIYA G W +R M+ V
Sbjct: 578 LGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVA 637
Query: 311 KMPGCSYIEVS 321
K+ GCS +E S
Sbjct: 638 KVAGCSMVEPS 648
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 130/265 (49%), Gaps = 35/265 (13%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+A+ G + AR +F+ ++ +WT +++ + + D EA+ +F M+ E DE M
Sbjct: 213 FARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVM 272
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------- 121
++ ++ACA+ G ++ GE H + + GL + V + N LI MY+
Sbjct: 273 VSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGES 332
Query: 122 --------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
K+G++ A +F+ M +K ++W+ MIAG + EAL++F M
Sbjct: 333 LDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSM 392
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAG 226
+KP+++T ++++SAC ++ +E G+ I K +Y I I +ID+ + G
Sbjct: 393 RAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNI--TIVLGTSLIDMYMKCG 450
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLL 251
++ A ++ M E W +++
Sbjct: 451 CMEAALEVF-DMLEEKGTPCWNAVI 474
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 16/266 (6%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
+ SRLL F + A L+++ LF L+ N + TL+ + P+
Sbjct: 37 YAASRLLL-FTTSATAARLLPHPLHHSLQLFGLVRSPNAFTCNTLLKAALRQGFPHLCFP 95
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L+ M PD +ACA G V G +H++ ++G + + L NAL+ MY+
Sbjct: 96 LYASMPA---APDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYS 152
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
G + A +VF+ ++W T++A G +A+ +F+RM R +A
Sbjct: 153 ACGCVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPE-RSAAAVSAMVA 211
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+ + G+VE R F+ + R + M+ R EA + M E
Sbjct: 212 LFA---RRGMVEEARGVFDGAEHRDAF-----TWTAMVSCFERNDLFMEALAVFSDMREE 263
Query: 242 A---NAAIWGSLLAASNIYGDVELGE 264
+ A+ S++AA G ++ GE
Sbjct: 264 GWPVDEAVMVSVVAACAKSGVIQNGE 289
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 216/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY K G ++ AR+LF+ M +++I++ +++ GY Q EA+ LF M+ ++
Sbjct: 309 WNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D ++ L+ACA LGA++ G +H IEQ + + L AL+DMY K G++ +A
Sbjct: 369 RVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATI 428
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + V TWT MIAGLA +G+G+ AL+ F +M +PN +++IA+L+AC H L
Sbjct: 429 VFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCL 488
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GR YF+ M+ Y I P+IE YGCMIDLLGR+G L EA L++ MP + NA IW S+L
Sbjct: 489 LNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASIL 548
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++L +CA +HL+KLEP G Y L NIY +W + KIR +M + VKK
Sbjct: 549 SACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKK 608
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S I V+ +VH+FV D SHP + +L +I+ ++K
Sbjct: 609 TAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 649
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 42/311 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +++G AK+G L + + L ++VISWT+LIA Y++ ++ EA+ F+ M +
Sbjct: 176 WTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGI 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ ++A LSACA+L +ELG +H +E+ G+ T L ALIDMYAK G G A Q
Sbjct: 236 APDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQ 295
Query: 132 V--------------------------------FENMKNKSVITWTTMIAGLALHGLGRE 159
V F+ M+ + +IT+ +M+ G G RE
Sbjct: 296 VFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLRE 355
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F M R ++ + T + +L+AC +G ++ GR ++ R +E I ++
Sbjct: 356 ALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLGTALL 414
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL-----E 274
D+ + G + EA + +RM + + W +++A G +G+ AL+H ++ +
Sbjct: 415 DMYMKCGRVDEATIVFQRM-GKRDVHTWTAMIAGLAFNG---MGKAALEHFYQMRCDGFQ 470
Query: 275 PHNSGNYAILS 285
P++ A+L+
Sbjct: 471 PNSVSYIAVLT 481
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 38/276 (13%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A LF+ M + T L A P+ LFRRM+ V+PD L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFT-FHFLFK 111
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVP-----LNNALIDMYAKSGKIGKALQVFENMKNK 139
C+ + + + L T++P ++N+LI MY + G A + F+ + K
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 140 SVITWTTMIAGLALHGL-------------------------------GREALDMFSRME 168
+ WT +I+GLA G+ REA+ F M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ P+E+T IA+LSAC + +ELGR +++ G+ +ID+ + G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRS-LHLLVEEKGMPTSENLVVALIDMYAKCGDF 290
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
A+++ + W +++ +G V++
Sbjct: 291 GHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 224/348 (64%), Gaps = 5/348 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GYA +GD++ AR LF++ T K+ W +I+GY Q + E + +FR MQ+ V
Sbjct: 174 WTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEV 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE ++ LSACA +GA++ G WIH Y+ + GL + ++ LIDMYAK G + A
Sbjct: 234 EPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKY 293
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + + W MI+G+A+ G G A+ +F ME+A +KP+ ITFIA+L+AC + G+
Sbjct: 294 LFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGM 353
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN----AAIW 247
V+ G R +N M + + IEPK E YGC+IDLL R G +EAE +++R+P A+ A W
Sbjct: 354 VDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAW 413
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+ L+A +G + E A + L +LE H SG Y +LSN+YA LG+ ++ ++R +M+
Sbjct: 414 RAFLSACCKHGQTQQAEVAAERLFQLERH-SGAYVLLSNMYAALGKHEDAKRVRNMMKLK 472
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
GV+K+PGCS I+V+ V+EF+AG+ +H D ++ +L ++N Q+ A+
Sbjct: 473 GVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNKQIVEAD 520
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 53/323 (16%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LSRLL ++ G L++A LF+ + + + T+I + AI
Sbjct: 38 FVLSRLLN------FCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIA 91
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F + + PD + L A A++ + LGE IH + G + N+L+ MY
Sbjct: 92 VFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYR 151
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------------------- 155
+ A QVF+ M S ++WT MI G A G
Sbjct: 152 SFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISG 211
Query: 156 -----LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYG 207
+E L MF M+ V+P+E + ILSAC H+G ++ G RY R G
Sbjct: 212 YVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYL----GRLG 267
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ + +ID+ + G+L A+ L M N W ++++ + GD GE A+
Sbjct: 268 LPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVC-WNAMISGMAMDGD---GEGAI 323
Query: 268 QHLIKLE-----PHNSGNYAILS 285
+ +++E P N A+L+
Sbjct: 324 KLFMEMEKAGIKPDNITFIAVLA 346
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 207/309 (66%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N M+A YAK D+ +AR +F+ + +K++ISW+++I+GY+Q + ++A+ +FR+MQ VK
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 782
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + + +S+CA LGA++LG+W+H Y+ + + + N+LIDMY K G +ALQV
Sbjct: 783 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 842
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++W ++I GLA +G +E+L++F M +PN +TF+ +L AC + LV
Sbjct: 843 FKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLV 902
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +F MK Y +EP+++ YGC++DLLGRAG L++A + + MP + + +W LL
Sbjct: 903 EEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 962
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ N +GDV + E + L +LEP NSGNY +LSN YA RW+E+ +R+ M D V+K
Sbjct: 963 SCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKS 1022
Query: 313 PGCSYIEVS 321
PGCS +E +
Sbjct: 1023 PGCSAVEAA 1031
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 209/318 (65%), Gaps = 2/318 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ G+A G++ AR LFE M +NV+SW+ +I GY + +P EA+ LFRRM E +
Sbjct: 158 WNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGI 217
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P EI +LA + A + +G + +GE +H Y E+ GL V + N+LID+YAK G I +L+
Sbjct: 218 SPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLR 277
Query: 132 VFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ M +++++WT++I+G A+HGL +A+++F+ M RA ++PN ITF+++L AC H G
Sbjct: 278 VFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGG 337
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G +F M Y I P ++ +GC+ID+LGRAG L+EAE+++R P E NA +W +L
Sbjct: 338 LVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTL 397
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM-GV 309
L + YG+VE+GE ++ ++ LE G++ +LSN+ L R++++ +RK++ V
Sbjct: 398 LGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSV 457
Query: 310 KKMPGCSYIEVSKRVHEF 327
K +E KR+H +
Sbjct: 458 KSFFNIVRMEAIKRLHAY 475
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 147/270 (54%), Gaps = 33/270 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ YA G+L AR++F+ M K+V+SW +LI GY+Q ++ + + LF+ MQ E VK
Sbjct: 591 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVK 650
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++ M+ +SAC +LG + +++ YIE Y + V L N L+D + + G++ A +V
Sbjct: 651 ADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 710
Query: 133 FENMK-------------------------------NKSVITWTTMIAGLALHGLGREAL 161
F NMK K +I+W++MI+G + +AL
Sbjct: 711 FFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDAL 770
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
++F +M+RA+VKP+ I +++S+C H+G ++LG+ ++ R I+ +ID+
Sbjct: 771 EIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVR-RNNIKADTIMENSLIDM 829
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G +EA ++ + M E + W S++
Sbjct: 830 YMKCGSAKEALQVFKEMK-EKDTLSWNSII 858
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
DL A +F+ + W LI G AQ D P +AI +++ Q + PD + L
Sbjct: 501 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 560
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
ACA++ A+ GE +HN+I + GL + + ++N+LI +YA G + A VF+ M K V++
Sbjct: 561 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 620
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W ++I G + ++ L +F M+ VK +++T I ++SAC +G + ++
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 680
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
Y IE + ++D GR G LQ AEK+ M
Sbjct: 681 D-YCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM 714
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 33/253 (13%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
++ W L+ Y+ P +A+ LFR + + D A AL ACA LG
Sbjct: 52 DRRPTPWHALLKAYSHGPHPQDALQLFRHAR-WHAADDTYAFTFALKACAGLGWPRCCMQ 110
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA---- 152
+H + + G ++ AL+++Y G + + FE M K+ ++W +I G A
Sbjct: 111 LHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGE 170
Query: 153 ----------------------LHGLGR-----EALDMFSRMERARVKPNEITFIAILSA 185
+ G R EA+ +F RM + P+EIT +A++ A
Sbjct: 171 VEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPA 230
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
+VG + +G + + G+ + +IDL + G +Q + ++ M N
Sbjct: 231 LSNVGKILIGEALHGYCE-KEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLV 289
Query: 246 IWGSLLAASNIYG 258
W S+++ ++G
Sbjct: 290 SWTSIISGFAMHG 302
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 218/340 (64%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N ++ YAK G + A +F M K++ISW T+I GY++ NEA++LF + VE
Sbjct: 436 NALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRF 495
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + L ACA L A + G IH YI + G + + N+L+DMYAK G + A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARL 555
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ +K +++WT MIAG +HG G+EA+ +F++M +A ++P+EI+F+++L AC H GL
Sbjct: 556 LFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGL 615
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+FNIM+ IEP +E Y C++D+L R G L +A + + MP +A IWG+LL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALL 675
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+ DV+L E + + +LEP N+G Y +++NIYA +W E ++RK + G++K
Sbjct: 676 CGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRK 735
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PGCS+IE+ RV+ FVAGD+S+P+ +++ L + +M
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARM 775
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 143/255 (56%), Gaps = 13/255 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+F NT++ Y+K GDL++A+ +F M+ ++V+S+T++IAGYA+ EA+ LF M+ E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD + A L+ CA+ ++ G+ +H +I++ + + ++NAL+DMYAK G + +A
Sbjct: 392 GISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREA 451
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS-RMERARVKPNEITFIAILSACCH 188
VF M+ K +I+W T+I G + + EAL +F+ + R P+E T +L AC
Sbjct: 452 ELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACAS 511
Query: 189 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE----AN 243
+ + GR IM++ Y + + ++D+ + G L LL R+ F+ +
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGAL-----LLARLLFDDITSKD 564
Query: 244 AAIWGSLLAASNIYG 258
W ++A ++G
Sbjct: 565 LVSWTVMIAGYGMHG 579
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++VA Y K +++AR +F+ MTE++VISW ++I GY + +++F +M ++
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ + CA + LG +H + + + N L+DMY+K G + A V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +SV+++T+MIAG A GL EA+ +F ME + P+ T A+L+ C L+
Sbjct: 354 FREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLL 413
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ G+R I ++ G + + ++D+ + G ++EAE + M
Sbjct: 414 DEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEM 458
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y GDL A +F+ + + + W L+ A+ + +I LF++M V+ D
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ + L +V GE +H YI + G + N+L+ Y K+ ++ A +VF+ M
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ VI+W ++I G +GL + L +F +M + ++ + T +++ + C L+ LGR
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 199 FNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+K+ + E + ++D+ + G L A+ + R M
Sbjct: 319 HCFGVKACFSREDRF--CNTLLDMYSKCGDLDSAKVVFREMS 358
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+++V T + + + A+ L ++ P + + L CA +++ G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+ N+I G L + L MY G + +A +VF+ +K + + W ++ LA G
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGD 175
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYG 207
++ +F +M + V+ + TF + + + V G + I+KS +G
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFG 227
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 216/346 (62%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+M+ GYAK ++ +A+A+F M EKNV++W LIA YA + EA+ LF R++ E+V
Sbjct: 319 TSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVW 378
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVPLNNALIDMYAKSGKI 126
P L+ACA L ++LG+ H ++ + G + V + N+L+DMY K+G I
Sbjct: 379 PTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSI 438
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+VFE M + ++W MI G A +G ++AL +F RM + +P+ +T I +LSAC
Sbjct: 439 SDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLV+ GRRYF M +GI P + Y CMIDLLGRAG+L+E E+L+ MP E +A +
Sbjct: 499 GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W SLL A ++ ++++GE A L +L+P NSG Y +LSN+YA LG+W + ++R+ M+
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKH 618
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GV K PGCS+IE+ ++V+ F+A D HP + ++ L I QM
Sbjct: 619 RGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMS 664
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 38/276 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK A+ +F+ M E+N++SW +LI Y Q +EA+ LF RM +
Sbjct: 186 TALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFV 245
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGK------ 125
PDE+ + + +SACA L A G +H ++ + LNNAL+DMYAK G+
Sbjct: 246 PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKC 305
Query: 126 -------------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+G A VF M K+V+ W +IA A + EA
Sbjct: 306 VFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEA 365
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKIEQY-- 215
L +F R++R V P T+ +L+AC ++ ++LG++ + +++K R+ P+ + +
Sbjct: 366 LRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVG 425
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G + + K+ RM N + W +++
Sbjct: 426 NSLVDMYLKTGSISDGAKVFERMAARDNVS-WNAMI 460
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 31/257 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF--------- 63
NT+++ YA++G L++AR +F+ M +N S+ L++ A++ + ++A+ LF
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 64 ----------------------RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 101
M ++ + + +ALSACA A GE +H +
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+ + V + AL+DMYAK + +A +VF+ M +++++W ++I +G EAL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F RM + P+E+T +++SAC + GR+ M + ++D+
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 222 LGRAGYLQEAEKLLRRM 238
+ G EA+ + RM
Sbjct: 294 YAKCGRTWEAKCVFDRM 310
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 217/347 (62%), Gaps = 1/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MVA A GD++ AR LF+ M +++ ++W+ +IAGY + + EA+ LF M
Sbjct: 184 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 243
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E +++ L+ACAQ+G ++ G+W+H Y+ G+ + L AL+DMY+K G + A++V
Sbjct: 244 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 303
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+M ++V TWT+ ++GLA++G+G E L +F RME A ++PN ++F+A+L C GLV
Sbjct: 304 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 363
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F+ M +YG++P E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 364 DEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 422
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ V+LG+ AL L+ +E N + LSNIYA W ++R +M+ GVKK+
Sbjct: 423 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 482
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IEV +VHEF G HP ++ + +L +++ +++ + N
Sbjct: 483 PGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTAN 529
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y+K G + A +FE M E+NV +WT+ ++G A E + LF+RM+
Sbjct: 282 KLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGA 341
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++P+ ++ +A L C+ G V+ G + +++YG++ ++D+Y ++G++ A
Sbjct: 342 GIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDA 401
Query: 130 LQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
+ +M W ++ +H LG+ ALD +E
Sbjct: 402 ISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIE 444
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 201/306 (65%), Gaps = 1/306 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ K+GDL +F M E+ V+SW +++ A+ ++ +A+ LF M +
Sbjct: 175 WNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGF 234
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKAL 130
+PD+ +++ L CA+LGAV++GEWIH+Y G L + + N+L+D Y K G + A
Sbjct: 235 EPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAW 294
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F +M +K+V++W MI+GLA +G G +++F M +PN+ TF+ +L+ C HVG
Sbjct: 295 SIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVG 354
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ GR F M ++ + PK+E YGC++DLLGR G+++EA L+ MP + AA+WG+L
Sbjct: 355 LVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGAL 414
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A YGD E+ E A + L++LEP NSGNY +LSN+YA GRW+E K+R +MR GVK
Sbjct: 415 LSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVK 474
Query: 311 KMPGCS 316
K+PG S
Sbjct: 475 KVPGQS 480
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A LF N++ + +I ++ + + + F M+ + PDE + + +
Sbjct: 59 ATRLFAHTHNPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASN 118
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L LG +H ++ + G + A +++YA ++G A +VF+ M++ V+ W M
Sbjct: 119 LRYYVLGGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLM 178
Query: 148 IAG-------------------------------LALHGLGREALDMFSRMERARVKPNE 176
I G LA + +AL++F+ M +P++
Sbjct: 179 IRGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDD 238
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
+ + +L C +G V++G + S+ ++ I ++D + G LQ A +
Sbjct: 239 ASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFN 298
Query: 237 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
M N W ++++ G+ E+G + ++ EP++S +L+
Sbjct: 299 DMA-SKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLA 348
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 26/179 (14%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GL + + + A ++ A ++F + N +++ + +I +LH
Sbjct: 27 IHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHTHNPNILLFNAIIKAHSLHPP 86
Query: 157 GREALDMFSRMERARVKPNEITFIA-----------ILSACCHVGLVELG-RRYFNIMKS 204
+ FS M+ + P+E T +L C H +V LG R+ ++ +
Sbjct: 87 FHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVA 146
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
+ E+ G +A K+ M + + +W ++ GD+E G
Sbjct: 147 ALEVYASCERMG-------------DASKVFDEMR-DPDVVVWNLMIRGFCKMGDLETG 191
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 213/340 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+V YA+ G A +LF + K+ I+W LI+G+ Q +A+ +F +M
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++A+SA A L ++ G+ +H + G + + NALI +Y K G I A
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M + YG+ P + Y C++D+LGRAG L A + + MP ANA IW +LL
Sbjct: 665 VEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ G+W ++RK+M+D G++K
Sbjct: 725 SACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PG S+IEV VH F GD HP D++Y+ L ++N ++
Sbjct: 785 EPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 2/240 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L+ AR + E++ +++V+SWT++IAGY Q D EA+ F+ MQ V PD I +
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A SACA + A+ G IH + G + + N L+++YA+ G+ +A +F +++
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEH 510
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K ITW +I+G L ++AL +F +M +A K N TFI+ +SA ++ ++ G++
Sbjct: 511 KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + E +I L G+ G +++A+ + M N W +++ + + +G
Sbjct: 571 HG-RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHG 628
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 8/273 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F L NV+ W ++ Y Q+ ++ +F +MQ + P++
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTY 349
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C G +ELGE IH+ + G + + ++ LIDMY+K G + KA ++ E ++
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEK 409
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ V++WT+MIAG H EAL F M+ V P+ I + SAC + + G +
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + S Y + I + +++L R G +EA L R + + + W L++ +
Sbjct: 470 HARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISG---F 523
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAI 290
G L + AL +K+ Y + + I AI
Sbjct: 524 GQSRLYKQALMVFMKM-GQAGAKYNVFTFISAI 555
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y G A +F M + +++ TLI+G+AQ A+ +F MQ+ ++
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA +G ++ G+ +H+Y+ + G++ +L+D+Y K G I A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +V+ W M+ ++ ++F +M+ + PN+ T+ IL C G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
ELG + + + + G E + G +ID+ + G L +A K+L + + + W S++A
Sbjct: 363 ELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIA 420
Query: 253 A 253
Sbjct: 421 G 421
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +F+ ++ ++ +SW +++GYAQ EA L+ +M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LSAC + G IH + + + + NALI +Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M +T+ T+I+G A G G AL +F M+ + ++P+ +T ++L+AC VG +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G++ + + + G+ G ++DL + G ++ A + + N +W +L
Sbjct: 262 QKGKQLHSYLL-KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLV 319
Query: 253 ASNIYGDV 260
A YG +
Sbjct: 320 A---YGQI 324
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 47 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-----IHNYI 101
+A + D P + ++L + + AL AC G W IH
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRG----NRWPLVLEIHATS 69
Query: 102 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
GL + N LID+YAK+G + +A QVF+ + ++ ++W M++G A GLG+EA
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAF 129
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 220
++S+M V P ++LSAC L GR + + K + E + +I
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIA 187
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 268
L G + AE++ M F + + +L++ G GECALQ
Sbjct: 188 LYLGFGSFKLAERVFCDMLF-CDRVTFNTLISGHAQCGH---GECALQ 231
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 207/308 (67%), Gaps = 2/308 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y D+ A LFE M + +++W T+I + EAI LF RM +K
Sbjct: 190 NTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLK 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + LSACA LG +++G +H+ I+ GL +V ++N+LIDMYAK G + A ++
Sbjct: 250 PDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEI 309
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F MK +++++W TMI GLA+HG G EAL++FS+M E PNE+TF+ +L AC H G+
Sbjct: 310 FNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGM 369
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GRRYF+IM+ Y I+P I+ YG M+D+LGRAG ++EA +L++ MP E+N+ +W +LL
Sbjct: 370 VEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLL 429
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G++EL E Q L++LEP +S +Y +L+N+YA G+WN+ ++RK M GV+K
Sbjct: 430 AACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQK 489
Query: 312 -MPGCSYI 318
PG SYI
Sbjct: 490 PKPGNSYI 497
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 121/239 (50%), Gaps = 2/239 (0%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
++ G ++ A +F + + W T+I G + QP +A ++RMQV+ D
Sbjct: 96 SECGSMDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYS 155
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ C QLG+ LG+ IH + ++GL V + N L+ MY I A +FE M
Sbjct: 156 FLVKVCGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKS 215
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
++ W T+I G +EA+++F RM ++ +KP++ TF+ LSAC +G +++GRR
Sbjct: 216 YLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVH 275
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G+ + +ID+ + G ++ A ++ +M N W +++ ++G
Sbjct: 276 SCI-DHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHG 332
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G A G + A LF M E+ + +
Sbjct: 321 WNTMILGLAMHGHGDEALELFSKMLEEKLAT----------------------------- 351
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+E+ L L AC+ G VE G + + + Y + + +++D+ ++G + +A
Sbjct: 352 -PNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAY 410
Query: 131 QVFENMKNKS-VITWTTMIAGLALHG 155
++ ++M +S I W T++A +HG
Sbjct: 411 RLIKSMPIESNSIVWRTLLAACRVHG 436
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 219/339 (64%), Gaps = 4/339 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y++ G++ NAR F+++ EKN++S+ T++ YA+ EA LF ++
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + LS + +GA+ GE IH+ I + G + + + NALI MY++ G I A QV
Sbjct: 349 VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQV 408
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + +VI+WT+MI G A HG AL+ F +M A V PNE+T+IA+LSAC HVGL+
Sbjct: 409 FNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLI 468
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G ++F MK +GI P++E Y C++DLLGR+G+L+EA +L+ MPF+A+A + + L
Sbjct: 469 SEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLG 528
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+++LG+ A + +++ +PH+ Y +LSN++A G+W E +IRK M++ + K
Sbjct: 529 ACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKE 588
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPD----FDRLYQILCKI 347
GCS+IEV +VH+F GDTSHP +D L Q+ KI
Sbjct: 589 AGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKI 627
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 130/239 (54%), Gaps = 14/239 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL +A +F+ M ++NV++WT +I + Q+ +A+ LF M + PD + +
Sbjct: 93 GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVV 152
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNK 139
SACA++G + LG H + + GL+ V + +L+DMYAK G + A +VF+ M
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
Query: 140 SVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V++WT +I G G REA+++F M + +VKPN TF ++L AC ++ + LG +
Sbjct: 213 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 199 FNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ ++ ++ ++ C +I + R G ++ A K + FE N + +++ A
Sbjct: 273 YALV-----VKMRLASINCVGNSLISMYSRCGNMENARKAFDVL-FEKNLVSYNTIVNA 325
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 14 TMVAGYAKV---GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVE 69
++V YAK G +++AR +F+ M NV+SWT +I GY Q + EAI LF M
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
VKP+ + L ACA L + LGE ++ + + L +I + N+LI MY++ G + A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+ F+ + K+++++ T++ A EA ++F+ +E A N TF ++LS +
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364
Query: 190 GLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G + G + + I+KS G + + +I + R G ++ A ++ M + N W
Sbjct: 365 GAIGKGEQIHSRILKS--GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWT 421
Query: 249 SLLAASNIYG 258
S++ +G
Sbjct: 422 SMITGFAKHG 431
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+++++SW+ LI+ YA ++ EAI+ F M P+E AC+ + LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 97 IHNYIEQYG-LNTIVPLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
I ++ + G + V + ALIDM+ K +G + A +VF+ M +++V+TWT MI
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIE 213
G R+A+D+F M + P+ T ++SAC +GL+ LGR++ +MKS ++ +
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV- 182
Query: 214 QYGC-MIDLLGRA---GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 265
GC ++D+ + G + +A K+ RMP N W ++ I G V+ G C
Sbjct: 183 --GCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAI-----ITGYVQSGGC 230
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 217/344 (63%), Gaps = 2/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ--VEN 70
T++ Y+ A +F+ + + + +SW LI+ + +A+ +F MQ +
Sbjct: 207 TTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADG 266
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD++ L L ACA LGA+E GE +HNYIE++G + + L N+LI MY++ G++ KA
Sbjct: 267 FEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAY 326
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M ++V++W+ MI+G A+HG GREA++ F +M++ V P++ T +LSAC H G
Sbjct: 327 SIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCG 386
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G +F+ M +GIEP I YGCM+DLLGRAG L +A +L+ M + ++ +W +L
Sbjct: 387 LVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTL 446
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ LGE + HLI+L+ +G+Y +L NIY+ +G W++ +RK M++ G++
Sbjct: 447 LGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQ 506
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS IE+ +VHEFV D HP D +Y++L +I Q+K A
Sbjct: 507 TSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIA 550
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
A + D+ + +F + + + + +I Y+ P + L+R M+ V P+ +
Sbjct: 110 AALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPL 169
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+ + +C ++ ++ G IH I + G + L L+D+Y+ K +A +VF+ +
Sbjct: 170 SSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEI 229
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITFIAILSACCHVGLVEL 194
++W +I+ + R+AL MF M+ +P+++T + +L AC ++G +E
Sbjct: 230 PQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEF 289
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G R N ++ +G + + +I + R G L++A + +RM E N W ++++
Sbjct: 290 GERVHNYIE-EHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMD-ERNVVSWSAMISGF 347
Query: 255 NIYG 258
++G
Sbjct: 348 AMHG 351
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 213/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ YAK G +++A F+ M K+ +S++ +++G Q A+++FR MQ+ +
Sbjct: 351 NTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ML L AC+ L A++ G H Y+ G T + NALIDMY+K GKI A +V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +++W MI G +HGLG EAL +F + +KP++ITFI +LS+C H GLV
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR +F+ M + I P++E CM+D+LGRAG + EA +R MPFE + IW +LL+
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 590
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++ELGE + + L P ++GN+ +LSNIY+ GRW+++ IR +D G+KK+
Sbjct: 591 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE++ VH FV GD SH ++ + L ++ +MK
Sbjct: 651 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK 690
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 10 KFWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
F N +V G YAK L AR +F++M +N +SW+ +I GY D EA+ LF
Sbjct: 240 SFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELF 299
Query: 64 RRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+M +++ + P + + + L ACA+L + G +H YI + G + L N L+ MYAK
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAK 359
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G I A++ F+ M K ++++ +++G +G AL +F M+ + + P+ T + +
Sbjct: 360 CGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGV 419
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H+ ++ G + R G +ID+ + G + A ++ RM
Sbjct: 420 LPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAREVFNRMD-RH 477
Query: 243 NAAIWGSLLAASNIYG 258
+ W +++ I+G
Sbjct: 478 DIVSWNAMIIGYGIHG 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 89/156 (57%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ + +VI W +I YA + AI L+ M V+P++ L AC+
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L A+E G IH++ + +GL + V + AL+D YAK G + +A ++F +M ++ V+ W M
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAM 181
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
IAG +L+GL +A+ + +M+ + PN T + +L
Sbjct: 182 IAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G L A+ LF M+ ++V++W +IAG + ++A+ L +MQ E +
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L + A+ G+ +H Y + + V + L+DMYAK + A ++
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M ++ ++W+ MI G +EAL++F +M + + P +T ++L AC +
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327
Query: 192 VELGRR 197
+ GR+
Sbjct: 328 LSRGRK 333
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L AC Q ++ + IH + + N + + L +Y ++ A ++F+ + N
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
SVI W +I A +G A+D++ M V+PN+ T+ +L AC + +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ K +G+E + ++D + G L EA++L M + W +++A ++YG
Sbjct: 132 HSHAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
Query: 259 DVELGECALQHLIKLE-----PHNSGNYAILSNI 287
L + A+Q +++++ P++S +L +
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 213/329 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ Y+K GD+ A +F+ ++ KN+ SW +I G Q EAI L+R M+ ++VK
Sbjct: 267 TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVK 326
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI ++ LSACA LGA+ELG +H Y+ + GL+ V L AL+DMYAK GKI A +
Sbjct: 327 PNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLI 386
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F K V W MI GLA HG GR++L +FS+M RA V+PN++TFI +LSAC H GLV
Sbjct: 387 FVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLV 446
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR F+ M ++G+ PK+E Y CM+DLLGRAG+L+EA +L++ M ++ IWG+LL+
Sbjct: 447 EEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLS 506
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++EL + + ++ + N G +LSNIYA GRW + ++R+ +++ +KK
Sbjct: 507 ACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKP 566
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
GCS++EV VH FV DT+H +Y
Sbjct: 567 SGCSWVEVDGVVHRFVVEDTTHLKSGEIY 595
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 159/281 (56%), Gaps = 11/281 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-- 68
WN++++GY + G + AR LFE M +NV+ WT +I GY + E ++LFR+M V
Sbjct: 162 WNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSA 221
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE--QYGLNTIVPLNNALIDMYAKSGKI 126
+ V+P+ M+ LSAC+ L E+G ++ +I+ + LNTI L ALIDMY+K G +
Sbjct: 222 DEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTI--LVTALIDMYSKCGDV 279
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
KA ++F+ + K++ +W +I G GL EA+D++ M+ VKPNEIT + +LSAC
Sbjct: 280 EKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSAC 339
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+G +ELGR ++ R G++ + ++D+ + G + +A + + E + A+
Sbjct: 340 AGLGALELGRE-VHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTS-EKDVAL 397
Query: 247 WGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
W +++ +GD +++ ++P++ +LS
Sbjct: 398 WNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLS 438
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 35/245 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
++ AR + + SW +LI Y P ++ L+ +M + KP L A
Sbjct: 43 IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------------------- 123
C+ LG+V GE IH ++ + G + + + N+LIDMY K
Sbjct: 103 CSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSW 162
Query: 124 ----------GKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRM--ERA 170
G++ KA +FE M ++V+ WT MI G G E L +F +M
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
V+PN T + +LSAC + E+G R+ ++ I +ID+ + G +++
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVG-RFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEK 281
Query: 231 AEKLL 235
A ++
Sbjct: 282 AWRIF 286
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
+PL LI I A V + + + +W ++I +HG + +L ++ +M R
Sbjct: 27 LPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLR 86
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
+ KP+ TF +L AC +G V G + + R G + +ID+ + L
Sbjct: 87 SSTKPSNFTFPFVLKACSTLGSVLEGEQ-IHTHVLRLGFGSDLFVCNSLIDMYCKCFRLD 145
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
A M F + W S+++ +G VE
Sbjct: 146 SARNFWDDMGFRDEVS-WNSIISGYVQWGQVE 176
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 213/331 (64%), Gaps = 1/331 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V+ YAK G + AR +F+ M EK V++W ++I+GY Q EA+ LF MQ VKPD
Sbjct: 159 LVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPD 218
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ LSACAQ+GA+ LG W+H YI + + V L AL++MY++ G + KA +VF+
Sbjct: 219 SSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFD 278
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+M+ K+++ WT MI+G +HG G +A+++F+ M +PN +TF+A+LSAC H GLV+
Sbjct: 279 SMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDE 338
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM-PFEANAAIWGSLLAA 253
GR+ F MK YG+ P +E CM+D+LGRAG+L EA + ++ P E A+W ++L A
Sbjct: 339 GRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGA 398
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
++ + +LG +HL+ +EP N G+Y +LSNIYA+ GR + KIR +M +KK
Sbjct: 399 CKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEV 458
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G S I+V +V+ F GD SHP +++Y L
Sbjct: 459 GYSTIDVDHKVYLFSMGDKSHPKTNQIYLYL 489
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 6/243 (2%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YA ++ R LF + + + + +LI ++ P E++ +RRM + N+
Sbjct: 61 AYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYT 120
Query: 78 MLAALSACAQLGAVELGEWIHN--YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
A + + A L A +GE IH YI YGL+ V AL+ YAKSG + A +VF+
Sbjct: 121 FSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYV--QAALVSFYAKSGHVMIARKVFDK 178
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M K+V+ W +MI+G +G G+EA+++F M+ VKP+ TF+++LSAC VG + LG
Sbjct: 179 MPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLG 238
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ + +R + + ++++ R G + +A ++ M E N W ++++
Sbjct: 239 -FWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSME-EKNIVAWTAMISGYG 296
Query: 256 IYG 258
++G
Sbjct: 297 MHG 299
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 223/354 (62%), Gaps = 15/354 (4%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-------------DQPNEAI 60
+++ YAK G + +R +F+ + E ++ +W ++ YA+ D E++
Sbjct: 292 SLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESL 351
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
LFR MQV ++P+E+ ++A +SAC+ LGAV G W+H ++ + + + A +DMY
Sbjct: 352 YLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMY 411
Query: 121 AKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
+K G + A QVF+ M ++ +T MI G A+HG G +AL+++ +M+ + P+ T
Sbjct: 412 SKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSAT 471
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
F+ + AC HVGLVE G F MK +G+EPK+E YGC+IDLLGRAG L+EAE+ L M
Sbjct: 472 FVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADM 531
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 298
P + NA +W SLL A+ I+G++ +GE AL LI+LEP SGNY +LSN+YA +GR N+
Sbjct: 532 PMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVK 591
Query: 299 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
++RK+M+ GV K+PG S +E+ +HEF+ GD SHP +Y + +IN +++
Sbjct: 592 RVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLE 645
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 26/238 (10%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE---AITLFRRMQV-ENVKPDEIAML 79
+L A +F ++ + + TLI+ N+ A +L+ ++ +N++P+
Sbjct: 195 NLPYAFKIFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFP 254
Query: 80 AALSACAQLGA-VELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIGKALQVFE 134
+ AC + G +H ++ ++ P +N +L++ YAK GK+ + +F+
Sbjct: 255 SLFKACCSNQSWFHYGPLLHTHVLKF---LQPPFDNFVQASLLNFYAKYGKMCVSRYIFD 311
Query: 135 NMKNKSVITWTTMIAGLALH-------------GLGREALDMFSRMERARVKPNEITFIA 181
+ + TW ++ A E+L +F M+ ++PNE+T +A
Sbjct: 312 RINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVA 371
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
++SAC ++G V G + + R I+ +D+ + G L A ++ +MP
Sbjct: 372 LISACSNLGAVSQG-FWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMP 428
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 222/346 (64%), Gaps = 3/346 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAK GDLN AR +F LM EK+V+SW++LI GY + EA+ LF RM +
Sbjct: 182 WNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGP 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E+ +++AL ACA LGA+E G +H YI + L + L +L+DMYAK G I +AL
Sbjct: 242 MANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALT 301
Query: 132 VFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF +++ V+ W +I GLA HGL +EA+++F M+ + P+EIT++ +LS C H
Sbjct: 302 VFRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHG 361
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE +F+ ++ ++G+ PK+E Y CM+D L RAG + EA + L +MP + +++ G+
Sbjct: 362 GLVEEAWYFFDCLR-KHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGA 420
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+ +G +++ + + L++L+P++ G Y LSNIYA RW+++ IR+ M GV
Sbjct: 421 LLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGV 480
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
KK PG S+IEV +H F+A D +H D ++++ +L I QMK E
Sbjct: 481 KKSPGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMKPIE 526
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 41/271 (15%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
DL+ + L + +W TLI ++ PN +IT+F +M V PD + +
Sbjct: 62 DLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVK 121
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
A ++L ELG +H +I + G + N+LI MYA I A +VF+ M K+++T
Sbjct: 122 ATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVT 181
Query: 144 WTTMIAGLALHG----------------------------LGR---EALDMFSRMERARV 172
W M+ G A G GR EA+ +F RM
Sbjct: 182 WNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGP 241
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK----IEQYGCMIDLLGRAGYL 228
NE+T ++ L AC H+G +E GR M RY +E + I ++D+ + G +
Sbjct: 242 MANEVTLVSALCACAHLGALEHGR-----MMHRYIVENELPLTIVLQTSLVDMYAKCGAI 296
Query: 229 QEAEKLLRRMPF-EANAAIWGSLLAASNIYG 258
EA + R EA+ IW +++ +G
Sbjct: 297 HEALTVFRACSLQEADVLIWNAIIGGLATHG 327
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 217/347 (62%), Gaps = 1/347 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
MVA A GD++ AR LF+ M +++ ++W+ +IAGY + + EA+ LF M
Sbjct: 1389 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 1448
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E +++ L+ACAQ+G ++ G+W+H Y+ G+ + L AL+DMY+K G + A++V
Sbjct: 1449 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 1508
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE+M ++V TWT+ ++GLA++G+G E L +F RME A ++PN ++F+A+L C GLV
Sbjct: 1509 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 1568
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR F+ M +YG++P E YGCM+DL GRAG L +A + MP E + +WG+LL
Sbjct: 1569 DEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 1627
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS I+ V+LG+ AL L+ +E N + LSNIYA W ++R +M+ GVKK+
Sbjct: 1628 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 1687
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S IEV +VHEF G HP ++ + +L +++ +++ + N
Sbjct: 1688 PGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTAN 1734
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y+K G + A +FE M E+NV +WT+ ++G A E + LF+RM+
Sbjct: 1487 KLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGA 1546
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++P+ ++ +A L C+ G V+ G + +++YG++ ++D+Y ++G++ A
Sbjct: 1547 GIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDA 1606
Query: 130 LQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 168
+ +M W ++ +H LG+ ALD +E
Sbjct: 1607 ISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIE 1649
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 217/344 (63%), Gaps = 6/344 (1%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+++ GYAK ++ +A+ +F M EKNVI+W LIA YAQ + EAI LF +++ +++ P
Sbjct: 324 SILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 383
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVPLNNALIDMYAKSGKIG 127
L+AC + ++LG+ H ++ + +G + V + N+L+DMY K+G I
Sbjct: 384 THYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 443
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+VFE M + ++W MI G A +G ++AL +F RM + P+ +T I +LSAC
Sbjct: 444 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 503
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ GRRYF+ M +GI P + Y CM+DLLGRAG+L+EAE+L+ MP E ++ +W
Sbjct: 504 HSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLW 563
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++ +VELGE L +L+P NSG Y +LSN+YA +G+W E ++R+ M+D
Sbjct: 564 ASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDR 623
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
GV K PGCS+IE+ ++++ F+A D HP + ++ L I +M
Sbjct: 624 GVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 38/276 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK +AR +F+ M E+NV+SW +LI Y Q EA+ LF M
Sbjct: 190 SALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFS 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A G +H ++ + L + LNNAL+DMYAK G+ +A
Sbjct: 250 PDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARC 309
Query: 132 VFENMKNKS-------------------------------VITWTTMIAGLALHGLGREA 160
+F++M ++S VI W +IA A +G EA
Sbjct: 310 IFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 369
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKIEQY-- 215
+ +F +++R + P T+ +L+AC ++ ++LG++ + +++K R+ P+ + +
Sbjct: 370 IRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVG 429
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G + + K+ RM N + W +++
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 464
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR------- 65
NT+V+ YA++G L +AR +F+ + +N S+ L++ YA++ +P+EA LF
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 66 --------------------------MQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 99
M ++ + + +ALSACA GE +H
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 100 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
+ + V + +AL+DMYAK + A +VF+ M ++V++W ++I +G E
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F M A P+E+T +++SAC + GR+ M + + ++
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 220 DLLGRAGYLQEAEKLLRRMP 239
D+ + G EA + MP
Sbjct: 296 DMYAKCGRTWEARCIFDSMP 315
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y K G +++ +FE M ++ +SW +I GYAQ + +A+ LF RM N
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN 489
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + M+ LSAC G V+ G + H+ E +G+ ++D+ ++G + +A +
Sbjct: 490 PDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEE 549
Query: 132 VFENMK-NKSVITWTTMIAGLALH 154
+ +M + W +++ LH
Sbjct: 550 LINDMPMEPDSVLWASLLGACRLH 573
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 215/341 (63%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
N ++ Y G L+ A FE M E++++SW+++IA +A+ EA+ LF+RMQ V V
Sbjct: 123 NGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTV 182
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDE+ +L+ +SA + LG +ELG+WI +I + GL V L AL+DM+++ G I ++++
Sbjct: 183 KPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMR 242
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++V+TWT +I GLA+HG EAL MF M +P+ +TF +L AC H GL
Sbjct: 243 VFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGL 302
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F +++ YG+EP E YGCM+DLLGRAG L EA K + MP N+ IW +LL
Sbjct: 303 VSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLL 362
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + +EL E + + +L+ ++ G+Y +LSN+Y +GRW E +R MR+ + K
Sbjct: 363 GACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISK 422
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS I V+ +HEFVAGD +HP F+ + + L + +K
Sbjct: 423 KPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLK 463
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 124/235 (52%), Gaps = 7/235 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ AR++F+L+ + ++ T+I +A +M + V PD L A
Sbjct: 38 LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLF-SKMTMAGVSPDHFTFPFVLKA 96
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA+L + G +H+ + + G ++ V + N LI Y G + AL+ FE M + +++W
Sbjct: 97 CARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSW 153
Query: 145 TTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
++MIA A +G G EAL +F RM+ VKP+E+ ++++SA +G +ELG ++
Sbjct: 154 SSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG-KWIRGFI 212
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
SR G+E + ++D+ R G ++E+ ++ M E N W +L+ ++G
Sbjct: 213 SRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMG-ERNVLTWTALINGLAVHG 266
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 224/357 (62%), Gaps = 4/357 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G + +AR +F+ + E++V+ W +++A Y+Q QP+E++ L R M +KP E
Sbjct: 147 YAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTF 206
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ +++A A G + G+ +H Y ++G + + AL+DMYAKSG + A +FE ++
Sbjct: 207 VISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEE 266
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K V++W MI G A+HG EALD+F M + +V P+ ITF+ +L+AC H GL+ G+ +
Sbjct: 267 KRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMH 325
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M S + I P ++ Y CMIDLLG G L+EA KL+ M E +A +WG+LL + I+G
Sbjct: 326 FRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHG 385
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+GE AL+ L++LEP + GNY ILSN+YA G+W+ ++R +M + G+KK CS+I
Sbjct: 386 NVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWI 445
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESDVASM 372
EV +VH F++ DTSHP + +Y L + MK +A + + F V + + M
Sbjct: 446 EVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDM 502
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y L NA LF+ ++++N+ W +I GYA AI+L+ +M+ + PD
Sbjct: 42 LVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPD 101
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC+ L A+E G+ IH + + GL + V + ALIDMYAK G + A QVF+
Sbjct: 102 KFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFD 161
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + V+ W +M+A + +G E+L + M +KP E TF+ ++A GL+
Sbjct: 162 KIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQ 221
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ + R+G E + ++D+ ++G + A L + E W +++
Sbjct: 222 GKE-LHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITGY 279
Query: 255 NIYG 258
++G
Sbjct: 280 AMHG 283
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L +C A+E G+ +H I Q G++ L L+++Y + A +F+ + +++
Sbjct: 8 LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNL 67
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFN 200
W MI G A +G A+ ++ +M + P++ TF +L AC + +E G++ + +
Sbjct: 68 FLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKD 127
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+++S G+E + +ID+ + G ++ A ++ ++ E + W S+LA + N
Sbjct: 128 VIRS--GLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLATYSQNGQP 184
Query: 259 DVELGECALQHLIKLEPHNSGNYAI 283
D L C + L+P G + I
Sbjct: 185 DESLALCRVMAFNGLKP-TEGTFVI 208
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 210/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K G L+ A +F+ ++IS TT++ +Q D +AI LF +M + ++
Sbjct: 448 NGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLE 507
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+AC L A E G+ +H ++ + + V NAL+ YAK G I A
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMA 567
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W+ MI GLA HG G+ ALD+F RM V PN IT ++LSAC H GLV
Sbjct: 568 FSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLV 627
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++YF MK +GI+ E Y CMID+LGRAG L++A +L+ MPF+ANAA+WG+LL
Sbjct: 628 DDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG A + L LEP SG + +L+N YA G W+E K+RK+M+D VKK
Sbjct: 688 ASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKE 747
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S++E+ +VH F+ GD SHP +Y L ++ M A ++ N
Sbjct: 748 PAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPN 794
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 8/260 (3%)
Query: 5 SRLLYKFW--NTMVAGYAKVGDLNNARALFE----LMTEKNVISWTTLIAGYAQMDQPNE 58
+RL++ + N +VA Y G ++ AR +F+ + E+N +SW T+I+ Y + DQ +
Sbjct: 129 TRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGD 188
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
AI +FR M +P+E ++AC +E G +H + + G V NAL+D
Sbjct: 189 AIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVD 248
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MY+K G I A VFE M V++W I+G HG AL++ +M+ + + PN T
Sbjct: 249 MYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFT 308
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++L AC G LGR+ M + G ++D+ + G+L +A K+ M
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFM 367
Query: 239 PFEANAAIWGSLLAASNIYG 258
P + +W +L++ + G
Sbjct: 368 P-RRDLILWNALISGCSHDG 386
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G L++AR +F+ M +++I W LI+G + + E ++LF RM+ E + D
Sbjct: 347 LVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406
Query: 75 --EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + L + A A+ +H E+ GL + + N LID Y K G++ A++V
Sbjct: 407 VNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKV 466
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ ++ +I+ TTM+ L+ G +A+ +F +M R ++P+ ++L+AC +
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G++ + +++K ++ + ++ + G +++A+ +P E W +++
Sbjct: 527 EQGKQVHAHLIKRQF--TSDVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMI 583
Query: 252 AASNIYG 258
+G
Sbjct: 584 GGLAQHG 590
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
S LL F N ++ Y++ + ARA+F+ + + +SW++L+ Y+ P +A+ FR
Sbjct: 33 SGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFR 92
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ V +E A+ L CA V G +H L V + NAL+ +Y G
Sbjct: 93 AMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFG 149
Query: 125 KIGKALQVFENM----KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
+ +A ++F+ ++ ++W TMI+ + +A+ +F M + +PNE F
Sbjct: 150 MVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFS 209
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+++AC +E GR+ + R G E + ++D+ + G ++ A + +MP
Sbjct: 210 CVVNACTGSRDLEAGRQVHGAV-VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP- 267
Query: 241 EANAAIWGSLLAASNIYG 258
A+ W + ++ +G
Sbjct: 268 AADVVSWNAFISGCVTHG 285
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 221/349 (63%), Gaps = 4/349 (1%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++ A YAK G + AR+ F+ M NV+ W +I+GYA+ NEA+ LF+ M +N++
Sbjct: 310 SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRT 369
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D I + +A+ ACAQ+G+++L +W+ +YI + V +N ALIDM+AK G + A +VF
Sbjct: 370 DSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVF 429
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ +K V+ W+ MI G LHG G++A+D+F M++A V PN++TF+ +L+AC H GLVE
Sbjct: 430 DRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVE 489
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G F+ MK YGIE + + Y C++DLLGR+G+L EA + MP E ++WG+LL A
Sbjct: 490 EGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
IY V LGE A + L L+P N+G+Y LSN+YA W+ K+R +MR+ G+ K
Sbjct: 549 CKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDL 608
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQN 359
G S IE++ ++ F GD SHP F +++ L + ++K F H+++
Sbjct: 609 GYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIES 657
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 137/249 (55%), Gaps = 8/249 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA YAK G + AR +FE + ++N++SWT++I+GY Q P EA+ +F +M+ NVK
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD IA+++ L A + +E G+ IH + + GL L +L MYAK G++ A
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ +V+ W MI+G A +G EA+ +F M ++ + IT + + AC VG +
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 193 ELGR---RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+L + Y N K+ Y + + +ID+ + G + A ++ R + + +W +
Sbjct: 388 DLAKWMGDYIN--KTEYRNDVFVNT--ALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSA 442
Query: 250 LLAASNIYG 258
++ ++G
Sbjct: 443 MIVGYGLHG 451
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F +++ + WN +G++ AR +F+ E +V W +I GY+ + +AI
Sbjct: 104 FLVTKFVNASWN--------IGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIE 155
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
++ RMQ V PD + L AC+ + +E+G+ +H I + G + V + N L+ +YA
Sbjct: 156 MYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYA 215
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G++ +A VFE + ++++++WT+MI+G +GL EAL +F +M + VKP+ I ++
Sbjct: 216 KCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVS 275
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+L A V +E G+ + + G+E + + + + + G + A +M
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCV-VKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI- 333
Query: 242 ANAAIWGSLLA--ASNIYGDVELG 263
N +W ++++ A N Y + +G
Sbjct: 334 PNVMMWNAMISGYAKNGYTNEAVG 357
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ YAK G+ + AR +F+ + +K+ +S+ ++++ YAQ NEA +FRR+ V+N
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL-VKN 280
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V + I + L A + GA+ +G+ IH+ + + GL V + ++IDMY K G++
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F+ MKNK+V +WT MIAG +HG +AL++F M + V+PN ITF+++L+AC H
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL G R+FN MK R+G+EP +E YGCM+DLLGRAG+LQ+A L++RM + ++ IW
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLLAA I+ +VEL E ++ L +L+ N G Y +LS+IYA GRW + ++R +M++ G
Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ K PG S +E++ VH F+ GD HP +++Y+ L ++N ++ A ++ N S + D
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVD 580
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 142/255 (55%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+ G L +AR +F+ + ++N++SWT++I GY +A++LF+ + V+
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 73 PDE------IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
D+ + +++ +SAC+++ A L E IH+++ + G + V + N L+D YAK G+
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 127 GKAL--QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-NEITFIAIL 183
G A+ ++F+ + +K +++ ++++ A G+ EA ++F R+ + +V N IT +L
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVL 294
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
A H G + +G+ + + R G+E + +ID+ + G ++ A K RM N
Sbjct: 295 LAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKN 352
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 353 VRSWTAMIAGYGMHG 367
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 157/353 (44%), Gaps = 55/353 (15%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAIT 61
++SRLL+ +T + N LF +K +V SW ++IA A+ EA+
Sbjct: 12 SVSRLLHTERHT---------ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
F M+ ++ P + A+ AC+ L + G+ H +G + + +++ALI MY+
Sbjct: 63 AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF-- 179
GK+ A +VF+ + +++++WT+MI G L+G +A+ +F + ++ F
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 180 ----IAILSACCHV---GLVE-----LGRRYF-------NIMKSRYG------------- 207
++++SAC V GL E + +R F N + Y
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 208 ----IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM----PFEANAAIWGSLLAASNIYGD 259
++ Y ++ + ++G EA ++ RR+ NA ++L A + G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 260 VELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +G+C +I+ LE +I+ ++Y GR + K M++ V+
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSII-DMYCKCGRVETARKAFDRMKNKNVR 354
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 213/341 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ Y K GD+ +AR LF+ + K+VISW T+IAGY EA+ L M E VK
Sbjct: 208 TAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVK 267
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ++A L+AC+ L + G+ H + L + + +NAL+ MY+K G +G++ V
Sbjct: 268 PDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELV 327
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F N++ K +++W T+IA A HG ++ + +F ME + P++ITF+++LSAC HVG V
Sbjct: 328 FINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKV 387
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ + F++M S+Y I P+ E Y C++D+L RAG L++A ++ MP EA +WGSLL
Sbjct: 388 DASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWGSLLG 447
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+V+LGE A + L++ + +SG Y ILSNIYA G W + ++R M++ GVKK
Sbjct: 448 ACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAGMWGQVNQVRGQMKERGVKKQ 507
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
PG S+ E++ VH FV GD SHP+ ++ L KI+ M+
Sbjct: 508 PGYSWTEIANEVHMFVGGDASHPEMRKIISELRKISFHMRM 548
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 20/252 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AG ++G ++A LF M ++NV+S+TT++ G A+ + A +F M N+
Sbjct: 114 WNAMLAGLLRLGRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNL 173
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN-----ALIDMYAKSGKI 126
++ A +S G VE G ++E L +P N A+I Y K G +
Sbjct: 174 ----VSWAAMIS-----GYVENGM----FVEATKLFEAMPEKNVVACTAMITSYCKQGDV 220
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A ++F+ ++ K VI+W TMIAG +G G EA+ + + M R VKP+ T IA+L+AC
Sbjct: 221 ESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTAC 280
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ L+ G+ I + +E I ++ + + G + E+E + + + +
Sbjct: 281 SALALLRQGKSTHAI-AIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTK-DIVS 338
Query: 247 WGSLLAASNIYG 258
W +++AA +G
Sbjct: 339 WNTIIAAYAQHG 350
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F N ++ Y+K G++ + +F + K+++SW T+IA YAQ + + I LF M++
Sbjct: 307 FSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTG 366
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD+I L+ LSAC +G V+ + + + +Y ++ ++D+ +++G++ KA
Sbjct: 367 LIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKA 426
Query: 130 LQVFENMK---NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
++M K+V W +++ +HG LG A M + + P
Sbjct: 427 SSYIKDMPLEAEKNV--WGSLLGACQMHGNVQLGELAAKMLVQSDSESSGP 475
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ A+ GD+ AR +F+ M ++V+SW L+ + + + + RR+ E +
Sbjct: 19 NQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHH--LPAARRLFDEAMP 76
Query: 73 P-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI---------------------- 109
D ++ + ++ C G ++ + + T
Sbjct: 77 SRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGE 136
Query: 110 VPLNN-----ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+P N ++D A+ G++ +A +VF+ M ++++++W MI+G +G+ EA +F
Sbjct: 137 MPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLF 196
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
M + N + A++++ C G VE RR F+ ++++ + + MI
Sbjct: 197 EAMP----EKNVVACTAMITSYCKQGDVESARRLFDGIRAK-----DVISWNTMIAGYVH 247
Query: 225 AGYLQEAEKL 234
G+ +EA +L
Sbjct: 248 NGHGEEAMRL 257
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERAR 171
+N I A++G + A +VF+ M ++ V++W ++ AL GR L R+ + A
Sbjct: 18 DNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLT--ALWRAGRHHLPAARRLFDEAM 75
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+ +++ +I++ C G ++ YF R + + M+ L R G +A
Sbjct: 76 PSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKR-----NVATWNAMLAGLLRLGRADDA 130
Query: 232 EKLLRRMP 239
++L MP
Sbjct: 131 DRLFGEMP 138
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 217/348 (62%), Gaps = 3/348 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K G L A LFE M+ ++++SW +++A + M + I F M+
Sbjct: 176 KVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRA 235
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ D+ +++ L AC LG +L E +H YI GL+ + + AL+D+YAK G + +
Sbjct: 236 GINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDS 295
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF M N + WT M++ A+HG GREA++ F M R V P+ +TF +LSAC H
Sbjct: 296 CKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHS 355
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+ YF IM YG+E ++E Y CM+DLLGR+G+L +A KL++ MP E N+ +WG+
Sbjct: 356 GLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGA 415
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L+ A + G++ELG+ + L L+P +S NY LSN+Y+ G+W ++ K+R +M++ +
Sbjct: 416 LIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVL 475
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY---QILCKINGQMKFA 354
+ PGCSYIE ++H FV GD SHPD +++Y + L + N ++ FA
Sbjct: 476 IRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFA 523
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 145/259 (55%), Gaps = 6/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
+ +V+ Y ++G +A LF+ + +K+++SW +LI+G+++ + L RM+ E +
Sbjct: 77 DQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGL 136
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+E+ ++ +SACA +G +++G+ IH + G+ V + N+LI++Y K G + A
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACC 196
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M +S+++W +M+A GL + + F M RA + ++ T +++L AC ++G+
Sbjct: 197 LFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGV 256
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+L + + G++ + ++DL + G L ++ K+ M +A W ++L
Sbjct: 257 RKLAEAVHGYILNG-GLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAML 314
Query: 252 AASNIYGDVELGECALQHL 270
++ ++G G A++H
Sbjct: 315 SSYAMHGR---GREAIEHF 330
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-------NALIDMYAK 122
NV A++ A+S C+ + +Y I +N + L+ Y +
Sbjct: 36 NVDSLVSALITAISTCSSI----------SYCRALHCRVIKSVNYNHGFIGDQLVSSYVE 85
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIA 181
G AL++F+ + +K +++W ++I+G + L + RM +KPNE+T I
Sbjct: 86 LGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIP 145
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
++SAC VG +++G+ I + G+ +++ +I+L G+ G L+ A L M +
Sbjct: 146 VVSACAGVGELDVGKCIHGI-AVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQ 204
Query: 242 ANAAIWGSLLAASNIYGDVELG 263
+ + W S++A G E G
Sbjct: 205 SLVS-WNSMVAVHVHMGLAEKG 225
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 214/326 (65%), Gaps = 1/326 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GYA+ G ++ AR LFE M E+NVISW+ +I GY + +PNEA+ F+RM +
Sbjct: 247 WNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGI 306
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A + A++ACAQLGA+E G W+H+Y+E+ + V + ALIDMY K G++ A
Sbjct: 307 KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKL 366
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE+M KSV+TW MI GL HG G +A+ +F++ME R ++++ +A+L++C H GL
Sbjct: 367 IFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGL 426
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F M+ G+EPK+E YG +IDLLGRAG + +A + MP E +WGSLL
Sbjct: 427 VSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLL 486
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A+ + VEL E +++ L L +SG Y +LSNIYA G W++ +IRK+M G+KK
Sbjct: 487 ASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKK 546
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDF 337
G S IEV ++HEFV G S PD+
Sbjct: 547 NIGRSVIEVDGQIHEFVNG-VSSPDY 571
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 26 NNARALFELMTE---KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
++A ++F + E ++ W TL+ +A P ++ F RM+ V PD A L
Sbjct: 65 DHADSVFAHLAEEASRHAFPWNTLVRLHAAA-SPRRSLLYFSRMRRAAVAPDAYTFPAVL 123
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC +G +H + GL+ + NALI Y + G +VF++ + ++
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDH-GVRDLV 182
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W +M+AG G A D+F M R R + T I G V+ R F+ M
Sbjct: 183 SWNSMVAGYVGCGEVDLAQDLFDEM-RQRDAFSWATMIDGYGEM--AGGVDRARELFDQM 239
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
R + + MID R G + EA L MP E N W + I G V
Sbjct: 240 PDR-----DLVCWNSMIDGYARHGRMDEARVLFEEMP-ERNVISWSIV-----IDGYVRF 288
Query: 263 GE 264
GE
Sbjct: 289 GE 290
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 211/350 (60%), Gaps = 6/350 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T++ LL NT V D+ F M +K+++SW +I Y + P EA+ L
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDM------FFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+ RM+ + +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + KA VFENMK++ V++WT MI+ G G +A+ +FS+++ + + P+ I F+
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L+AC H GL+E GR F +M Y I P++E CM+DLLGRAG ++EA + ++ M E
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
N +WG+LL A ++ D ++G A L +L P SG Y +LSNIYA GRW E IR
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+M+ G+KK PG S +EV++ +H F+ GD SHP D +Y+ L + +MK
Sbjct: 537 IMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA + D+ +AR +F+ + E+NVI +I Y E + +F M NV+PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ G + +G IH + GL++ + + N L+ MY K G + +A V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + V++W +++ G A + +AL++ ME ++ + T ++L A + +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 251
Y M + G + + + MI + + EA +L RM FE +A S+L
Sbjct: 260 --MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 252 AASNIYGDVELGE 264
A + LG+
Sbjct: 317 PACGDTSALSLGK 329
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ Y K G L+ AR + + M+ ++V+SW +L+ GYAQ + ++A+ + R M+ +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D M + L A + NT + DM+ K GK
Sbjct: 239 HDAGTMASLLPAVS--------------------NTTTENVMYVKDMFFKMGK------- 271
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
KS+++W MI + + EA++++SRME +P+ ++ ++L AC +
Sbjct: 272 ------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG++ ++ R + P + +ID+ + G L++A + M + W ++++
Sbjct: 326 SLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMIS 383
Query: 253 ASNIYG 258
A G
Sbjct: 384 AYGFSG 389
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 111
++DQ + T+F QV + PD + +H+ I L
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPD----------------IRTLRTVHSRIILEDLRCNSS 75
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L L+ YA + A +VF+ + ++VI MI +G E + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+P+ TF +L AC G + +GR+ ++ G+ + ++ + G+ G+L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 232 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 284
+L M + W SL+ A N D L C +K+ H++G A L
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-HDAGTMASL 247
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 210/341 (61%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ YAK G +N A F M ++ +S+T +I+GY Q E + +F MQ+ +
Sbjct: 364 NTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGIN 423
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + + L ACA L + G H Y G + NALIDMYAK GKI A +V
Sbjct: 424 PEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKV 483
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + +++W TMI +HG+G EAL +F M+ +KP+++TFI ++SAC H GLV
Sbjct: 484 FDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLV 543
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +FN M +GI P++E Y CM+DLL RAG +E + +MP E + +WG+LL+
Sbjct: 544 AEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +Y +VELGE + + KL P ++GN+ +LSN+Y+ +GRW+++ ++R ++ G +K
Sbjct: 604 ACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKS 663
Query: 313 PGCSYIEVSKRVHEFVAGD-TSHPDFDRLYQILCKINGQMK 352
PGCS+IE+S VH F+ G SHP ++ L ++ +MK
Sbjct: 664 PGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMK 704
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 5/245 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ +V Y +L AR +F+ M KNV+ W LI YA EAI L+ +M
Sbjct: 54 FEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY 113
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ P+ L AC+ L G IH I++ L + V ++ AL+D YAK G + A
Sbjct: 114 GITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDA 173
Query: 130 LQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+VF+ M + V+ W +MI+G +LH G E + +M+ V PN T + +L A
Sbjct: 174 KEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQ 232
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
V + G+ R + + G ++D+ G+ + A ++ M N W
Sbjct: 233 VNSLRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 249 SLLAA 253
+++ A
Sbjct: 292 AMVGA 296
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 19 YAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
Y K ++ AR +F++M KN ++W+ ++ Y D EA+ LF Q+ +K D I
Sbjct: 265 YGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELF--CQLLMLKDDVIV 322
Query: 78 MLAA-----LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ A + CA L + G +H Y + G + + N L+ MYAK G I A++
Sbjct: 323 LSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRF 382
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + +++T +I+G +G E L MF M+ + + P + T ++L AC H+ +
Sbjct: 383 FNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL 442
Query: 193 ELG--RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + I+ G +ID+ + G + A K+ RM + W ++
Sbjct: 443 HYGSCSHCYAII---CGFTADTMICNALIDMYAKCGKIDTARKVFDRM-HKRGIVSWNTM 498
Query: 251 LAASNIYG 258
+ A I+G
Sbjct: 499 IIAYGIHG 506
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 163/352 (46%), Gaps = 42/352 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP-NEAITLFRRMQVENV 71
+V YAK G L++A+ +F+ M +++V++W ++I+G++ + +E L +MQ +V
Sbjct: 158 TALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDV 216
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ ++ L A AQ+ ++ G+ IH + + G V + ++D+Y K I A +
Sbjct: 217 SPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARR 276
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERAR---VKPNEITFIAILSACC 187
+F+ M K+ +TW+ M+ + REAL++F ++ + + + +T ++ C
Sbjct: 277 IFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCA 336
Query: 188 HVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
++ + G + +KS + ++ + ++ + + G + A + M +A
Sbjct: 337 NLTDLSTGTCLHCYAIKSGFVLDLMVGNT--LLSMYAKCGIINGAMRFFNEMDLR-DAVS 393
Query: 247 WGSLLAASNIYGDVELG---------------ECALQHLIKLEPHNSG-NYAILSNIYAI 290
+ ++++ G+ E G + L ++ H +G +Y S+ YAI
Sbjct: 394 FTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAI 453
Query: 291 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
+ + I + DM K C I+ +++V FDR+++
Sbjct: 454 ICGFTADTMICNALIDMYAK----CGKIDTARKV------------FDRMHK 489
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 2/332 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VEN 70
WNTMV+GY GDL +AR +F+ M E++VISW +I GY Q + ++AI +F MQ V
Sbjct: 182 WNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGG 241
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V PD++ +++ LSACA +GA++ G WI ++ G + L NALIDMYAK G + +A
Sbjct: 242 VVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEAR 301
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M+ + VI+W+TMI G HG EA +S+M VKPNE+TF+ +LSAC H G
Sbjct: 302 RIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAG 361
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G F+ M Y I PK+ YGC+IDLL RAG L EAE L+ MP E N +WG+L
Sbjct: 362 LVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGAL 421
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L I+ D GE QHL++L+ +G+Y ++ A +GR +++ M+ G+
Sbjct: 422 LGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGII 481
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFD-RLY 341
K PGCS IEV VHEF D + D RL+
Sbjct: 482 KDPGCSKIEVHNTVHEFKECDNTSSGKDIRLF 513
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 131/281 (46%), Gaps = 36/281 (12%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF-RRMQVENV-K 72
++ A +L +A+ +F + NV SW +I + A+ F R++ + +
Sbjct: 51 LIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPN 110
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + + ACA L A+ G +H + + GL+ + L +L+DMY K + A QV
Sbjct: 111 PNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQV 170
Query: 133 FENMKNKSVITWTTMIAGLAL-------------------------------HGLGREAL 161
F+ M + V++W TM++G L +G +A+
Sbjct: 171 FDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAI 230
Query: 162 DMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
++F M++ V P+++T +++LSAC HVG ++ GR + R G + +ID
Sbjct: 231 EVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWR-GRGLNLYLGNALID 289
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + G ++EA ++ M E + W +++ S +GD +
Sbjct: 290 MYAKCGTMEEARRIFDGMR-ERDVISWSTMICGSGTHGDAD 329
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT++ YAK G+ + AR +F+ + +K+ +S+ ++++ YAQ NEA +FRR+ V+N
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL-VKN 280
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V + I + L A + GA+ +G+ IH+ + + GL V + ++IDMY K G++
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F+ MKNK+V +WT MIAG +HG +AL++F M + V+PN ITF+++L+AC H
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL G R+FN MK R+G+EP +E YGCM+DLLGRAG+LQ+A L++RM + ++ IW
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
SLLAA I+ +VEL E ++ L +L+ N G Y +LS+IYA GRW + ++R +M++ G
Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ K PG S +E++ VH F+ GD HP +++Y+ L ++N ++ A ++ N S + D
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVD 580
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 142/255 (55%), Gaps = 11/255 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+ G L +AR +F+ + +++++SWT++I GY +A++LF+ + V+
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 73 PDE------IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
D+ + +++ +SAC+++ A L E IH+++ + G + V + N L+D YAK G+
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 127 GKAL--QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-NEITFIAIL 183
G A+ ++F+ + +K +++ ++++ A G+ EA ++F R+ + +V N IT +L
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVL 294
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
A H G + +G+ + + R G+E + +ID+ + G ++ A K RM N
Sbjct: 295 LAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKN 352
Query: 244 AAIWGSLLAASNIYG 258
W +++A ++G
Sbjct: 353 VRSWTAMIAGYGMHG 367
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 55/353 (15%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAIT 61
++SRLL+ +T + N LF +K +V SW ++IA A+ EA+
Sbjct: 12 SVSRLLHTERHT---------ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
F M+ ++ P + A+ AC+ L + G+ H +G + + +++ALI MY+
Sbjct: 63 AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF-- 179
GK+ A +VF+ + + +++WT+MI G L+G +A+ +F + ++ F
Sbjct: 123 TCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 180 ----IAILSACCHV---GLVE-----LGRRYF-------NIMKSRYG------------- 207
++++SAC V GL E + +R F N + Y
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 208 ----IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM----PFEANAAIWGSLLAASNIYGD 259
++ Y ++ + ++G EA ++ RR+ NA ++L A + G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 260 VELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +G+C +I+ LE +I+ ++Y GR + K M++ V+
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSII-DMYCKCGRVETARKAFDRMKNKNVR 354
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 215/350 (61%), Gaps = 22/350 (6%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G L AR LF +T+K V+SWT +IAG + ++ E LF RMQ EN+ P+EI M
Sbjct: 239 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM 298
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L E+ ++ I LN AL+DMYAK G I A ++F +
Sbjct: 299 LNK--------------------ERVEVDCI--LNTALVDMYAKCGDINAAGRLFIEAIS 336
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ + W +I G A+HG G EALD+F+ MER VKPN+ITFI +L AC H GLV G++
Sbjct: 337 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 396
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M +G+ P+IE YGCM+DLLGRAG L EA ++++ MP + N +WG+L+AA ++
Sbjct: 397 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 456
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ +LGE A L+++EP N G ++SNIYA RW+++ +RK M+ +G+KK PG S I
Sbjct: 457 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 516
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
EV+ VHEF+ GD SHP R+ ++L ++ ++ A ++ + + +L D
Sbjct: 517 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 566
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 50/193 (25%)
Query: 12 WNTMVAG------------------------------------------------YAKVG 23
W M+AG YAK G
Sbjct: 263 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCG 322
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 83
D+N A LF +++ W +I G+A EA+ +F M+ + VKP++I + L
Sbjct: 323 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 382
Query: 84 ACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SV 141
AC+ G V G+ + + +GL + ++D+ ++G + +A ++ ++M K +
Sbjct: 383 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 442
Query: 142 ITWTTMIAGLALH 154
I W ++A LH
Sbjct: 443 IVWGALVAACRLH 455
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 221/344 (64%), Gaps = 2/344 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
+M+ Y+ G A LF+ + +K+V++W LI+ + + +A+ LF MQ
Sbjct: 166 TSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYL 225
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD++ L L ACA L A+E GE IH YI+Q+G NT L N+LI MY++ G++ KA
Sbjct: 226 CQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAY 285
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M K+V++W+ MI+GL+++G GREA++ F M++ V+P + TF A+LSAC H G
Sbjct: 286 EVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCG 345
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G +F+ M+ + I P + YGC++DLLGRAG L +A +L+ M +A +W +L
Sbjct: 346 LVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTL 405
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G LGE ++HLI+L+ +G+Y +L NIY+ G W++ ++RK+M++ G+
Sbjct: 406 LGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIY 465
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
P C+ IE++ VH+F D SHP D++Y+ L +IN Q+K A
Sbjct: 466 TTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIA 509
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A DL +R LF+L+T V + ++ Y+ P E + ++R M+ + V+ D ++
Sbjct: 72 APFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSS 131
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
A+ +C +L ++ G IH I G L +++D+Y+ GK +A ++F+ + K
Sbjct: 132 FAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQK 191
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITFIAILSACCHVGLVELGRR 197
V+ W +I+ L + R+AL +F M+ +P+++T + +L AC + +E G R
Sbjct: 192 DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGER 251
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
++ ++G + +I + R G + +A ++ +M E N W ++++ ++
Sbjct: 252 IHGYIQ-QHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMT-EKNVVSWSAMISGLSMN 309
Query: 258 G 258
G
Sbjct: 310 G 310
>gi|18873857|gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G ++ A+ L + + + V+SW +++G++ + EA F M +K
Sbjct: 19 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 78
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L V
Sbjct: 79 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 138
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL
Sbjct: 139 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 198
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 199 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 258
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK
Sbjct: 259 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 318
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 319 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 360
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+ + + GL + + + ++DMY K G I +A ++ + + + V++W +++G +L+
Sbjct: 2 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 61
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 215
EA FS M +KP+ TF +L C ++ +ELG++ + I+K + I
Sbjct: 62 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-- 119
Query: 216 GCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWGSLL 251
++D+ + G + ++ EK+ +R NA I G L
Sbjct: 120 STLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 159
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 213/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+++ YAK G +++A F+ M K+ +S++ +++G Q A+++FR MQ+ +
Sbjct: 351 NTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ML L AC+ L A++ G H Y+ G T + NALIDMY+K GKI A +V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +++W MI G +HGLG EAL +F + +KP++ITFI +LS+C H GLV
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR +F+ M + I P++E CM+D+LGRAG + EA +R MPFE + IW +LL+
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 590
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++ELGE + + L P ++GN+ +LSNIY+ GRW+++ IR +D G+KK+
Sbjct: 591 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE++ VH FV GD SH ++ + L ++ +MK
Sbjct: 651 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK 690
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 10 KFWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
F N +V G YAK L AR +F++M +N +SW+ +I GY D EA+ LF
Sbjct: 240 SFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELF 299
Query: 64 RRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+M +++ + P + + + L ACA+L + G +H YI + G + L N L+ MYAK
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAK 359
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G I A++ F+ M K ++++ +++G +G AL +F M+ + + P+ T + +
Sbjct: 360 CGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGV 419
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H+ ++ G + R G +ID+ + G + A ++ RM
Sbjct: 420 LPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAREVFNRMD-RH 477
Query: 243 NAAIWGSLLAASNIYG 258
+ W +++ I+G
Sbjct: 478 DIVSWNAMIIGYGIHG 493
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 89/156 (57%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ + +VI W +I YA + AI L+ M V+P++ L AC+
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L A+E G IH++ + +GL + V + AL+D YAK G + +A ++F +M ++ V+ W M
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAM 181
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
IAG +L+GL +A+ + +M+ + PN T + +L
Sbjct: 182 IAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G L A+ LF M+ ++V++W +IAG + ++A+ L +MQ E +
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L + A+ G+ +H Y + + V + L+DMYAK + A ++
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F+ M ++ ++W+ MI G +EAL++F +M + + P +T ++L AC +
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327
Query: 192 VELGRR 197
+ GR+
Sbjct: 328 LSRGRK 333
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L AC Q ++ + IH + + N + + L +Y ++ A ++F+ + N
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
SVI W +I A +G A+D++ M V+PN+ T+ +L AC + +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ K +G+E + ++D + G L EA++L M + W +++A ++YG
Sbjct: 132 HSHAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
Query: 259 DVELGECALQHLIKLE-----PHNSGNYAILSNI 287
L + A+Q +++++ P++S +L +
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 217/334 (64%), Gaps = 1/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N ++ G+ K GD+ AR LF+LM ++ +SW T+IAG A+ D EAI LF M +
Sbjct: 193 YNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEI 252
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD +A+++ LSACAQLG +E G+ IH+YIE+ + L+ L+D YAK G + AL+
Sbjct: 253 RPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALK 312
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F++ +K++ TW M+ GLA+HG G L+ FSRM A VKP+ I+ + +L C H GL
Sbjct: 313 IFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGL 372
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ R+ F+ M+S YG+ + + YGCM DLLGRAG +++ ++++ MP + ++W LL
Sbjct: 373 VDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLL 432
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM-RDMGVK 310
I+GDVE+ E A +HL++L+P + G Y+IL+N+YA RW + IR+ + + V
Sbjct: 433 GGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVT 492
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
K+ G S I++ HEF+AGD+ H + D++Y +L
Sbjct: 493 KIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVL 526
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 172/400 (43%), Gaps = 56/400 (14%)
Query: 4 LSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
L++ LY T + L+ A+++F + + + T+I + + P A+ F
Sbjct: 54 LTKFLYTL-TTKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFF 112
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLN--------- 113
+M+ +V D + L ACAQLG V +H + ++G L+ + +N
Sbjct: 113 TQMRRLSVPLDSHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVS 172
Query: 114 ---------------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
N LID + K+G + KA ++F+ M + ++W T+IAG A
Sbjct: 173 DMSNDAYKVFDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCA 232
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 212
EA+++F M ++P+ + ++ LSAC +G +E G++ + ++ R ++
Sbjct: 233 KGDYCEEAIELFDFMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIE-RNAMKVDT 291
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
++D + G + A K+ + N W ++L ++G GE L++ +
Sbjct: 292 FLSTGLVDFYAKCGCVDIALKIFDSSS-DKNLFTWNAMLVGLAMHG---YGELLLEYFSR 347
Query: 273 LEPHNSGNYAILSNIYAILGRWNESGKI---RKVMRDM----GVKKMP---GC-----SY 317
+ I +I +L + SG + RK+ +M GV + P GC
Sbjct: 348 MIEAGVKPDGI--SILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGR 405
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 355
+ K+V E + D +L C+I+G ++ AE
Sbjct: 406 AGLIKKVMEMIKDMPRGGDMSVWSGLLGGCRIHGDVEIAE 445
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G + A+ L + + + ++SW ++I+G++ Q EA F M VK
Sbjct: 478 STVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L +
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLM 597
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + ++W MI G ALHG G EAL+MF RM++A V PN TF+A+L AC HVGL+
Sbjct: 598 FEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLL 657
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF +M SRY +EP++E + CM+D+LGR+ QEA K +R MP EA+A IW +LL+
Sbjct: 658 DDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A ++++L+P +S Y +LSN+YA G+W + + R++MR +KK
Sbjct: 718 ICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKE 777
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+AGD HP +Y++L + +MK +
Sbjct: 778 PGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLS 819
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ YA GD A +LF M + +V+SW L++GY Q +++ L M V
Sbjct: 73 WNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGV 132
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + L AC L + LG IH + GL V +AL+DMY K + AL+
Sbjct: 133 APDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALR 192
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W IAG + L++F +M+R + ++ + ++ +C +
Sbjct: 193 FFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITC 252
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ R+ + + +K+++ + + ++D+ +A L +A + +P
Sbjct: 253 LSTARQLHAHAIKNKFSADRVVGT--AIVDVYAKADSLVDARRAFFSLP 299
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +F+ M +++ +SW +IA Q + + I M ++
Sbjct: 377 NAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGME 436
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA L ++E G +H + GL +++ ++DMY K G I +A ++
Sbjct: 437 PDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKL 496
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + + +++W ++I+G +L+ EA FS M VKP+ T+ +L C ++ +
Sbjct: 497 HDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATI 556
Query: 193 ELGRR 197
ELG++
Sbjct: 557 ELGKQ 561
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K L +A F M E+N +SW IAG Q +Q + LF +MQ +
Sbjct: 175 SALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLG 234
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ A + +CA + + +H + + + + A++D+YAK+ + A +
Sbjct: 235 VSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRA 294
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GL 191
F ++ N +V M+ GL GLG EAL +F M R+ + + ++ + SAC V G
Sbjct: 295 FFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGY 354
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + + +KS + ++ + ++DL G+ L EA + + M + ++ W +++
Sbjct: 355 LQGLQVHCLAIKSGFDVDVCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAII 411
Query: 252 AA 253
AA
Sbjct: 412 AA 413
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK L +AR F + V + ++ G + EA+ LF+ M +
Sbjct: 276 TAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIG 335
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ SACA++ G +H + G + V + NA++D+Y K + +A V
Sbjct: 336 FDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLV 395
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ + ++W +IA L + + + + M R ++P++ T+ ++L AC + +
Sbjct: 396 FQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSL 455
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
E G + +KS G++ + ++D+ + G + EA+KL R+
Sbjct: 456 EYGSVVHGKAIKSGLGLDAFVSS--TVVDMYCKCGMITEAQKLHDRI 500
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L A A A+ G+ H + G ++N L+ MYA+ G A VF+ M +
Sbjct: 8 LYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPH 67
Query: 139 KSVITWTTM-------------------------------IAGLALHGLGREALDMFSRM 167
+ ++W TM ++G G+ R+++ + M
Sbjct: 68 RDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEM 127
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
R V P+ T +L AC + + LG + + + + G+E + ++D+ G+
Sbjct: 128 ARRGVAPDRTTLAVLLKACGGLEDLALGVQ-IHAVAVKTGLEMDVRAGSALVDMYGKCRS 186
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLA 252
L++A + M E N+ WG+ +A
Sbjct: 187 LEDALRFFHGMG-ERNSVSWGAAIA 210
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 208/347 (59%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K LN A +FE ++I++T++I +Q D +AI LF M + +
Sbjct: 443 NGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + + V NAL+ YAK G I A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLA 562
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + K V++W+ MI GLA HG G+ ALD+F RM + PN IT ++L AC H GLV
Sbjct: 563 FSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLV 622
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +RYFN MK +GIE E Y CMIDLLGRAG L +A +L+ MPF+ NAA+WG+LLA
Sbjct: 623 DEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLA 682
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG A + L LEP SG + +L+N YA G W++ K+RK+M+D VKK
Sbjct: 683 ASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKE 742
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S++E+ +VH F+ GD SHP +Y L ++ M A ++ N
Sbjct: 743 PAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPN 789
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 125/244 (51%), Gaps = 3/244 (1%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G ++ AR +F E E+N +SW L++ Y + D+ + A+ +F M V
Sbjct: 139 NALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGV 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+E ++AC +E G +H + + G + V NAL+DMY+K G I A
Sbjct: 199 QPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAV 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + V++W I+G LHG + AL++ +M+ + + PN T +IL AC G
Sbjct: 259 VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGA 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LGR+ M +G ++D+ + G L +A+K+ +P + + +W +L+
Sbjct: 319 FNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALI 376
Query: 252 AASN 255
+ +
Sbjct: 377 SGCS 380
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 145/293 (49%), Gaps = 11/293 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G L++A+ +F+ + +++++ W LI+G + Q EA++LF RM+ E +
Sbjct: 344 LVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVN 403
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ A L + A L A+ +H E+ G + + N LID Y K + A +VFE
Sbjct: 404 RTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFE 463
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +I +T+MI L+ G +A+ +F M R + P+ ++L+AC + E
Sbjct: 464 KHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQ 523
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G++ + +++K ++ + ++ + G +++A+ +P E W +++
Sbjct: 524 GKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGG 580
Query: 254 SNIYGDVELGECALQHLIKL-EPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+G G+ AL ++ + H S N+ ++ ++L N +G + + R
Sbjct: 581 LAQHGH---GKRALDVFHRMVDEHISPNHITMT---SVLCACNHAGLVDEAKR 627
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+K+GD+ A +F + E +V+SW I+G A+ L +M+ +
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L ACA GA LG IH ++ + ++ + L+DMYAK G + A +V
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ + + ++ W +I+G + EAL +F RM + N T A+L +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 121/255 (47%), Gaps = 6/255 (2%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
S L F N +++ Y+K +AR +F+ + + +SW++L+ Y+ P +A+ FR
Sbjct: 33 SGLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFR 92
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ +V+ +E + L G G +H GL + + NAL+ MY G
Sbjct: 93 SMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFG 149
Query: 125 KIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
+ +A VF+ ++ ++W +++ + A+ +F M V+PNE F ++
Sbjct: 150 FVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+AC +E GR+ + M R G + + ++D+ + G ++ A + ++P E +
Sbjct: 210 NACTGSRDLEAGRK-VHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP-ETD 267
Query: 244 AAIWGSLLAASNIYG 258
W + ++ ++G
Sbjct: 268 VVSWNAFISGCVLHG 282
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 207/308 (67%), Gaps = 2/308 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y D+ A LFE M + +++W T+I + EAI LF RM +K
Sbjct: 90 NTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLK 149
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + LSACA LG +++G +H+ I+ GL +V ++N+LIDMYAK G + A ++
Sbjct: 150 PDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEI 209
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F MK +++++W TMI GLA+HG G EAL++FS+M E PNE+TF+ +L AC H G+
Sbjct: 210 FNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGM 269
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE GRRYF+IM+ Y I+P I+ YG M+D+LGRAG ++EA +L++ MP E+N+ +W +LL
Sbjct: 270 VEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLL 329
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G++EL E Q L++LEP +S +Y +L+N+YA G+WN+ ++RK M GV+K
Sbjct: 330 AACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIRGVQK 389
Query: 312 -MPGCSYI 318
PG SYI
Sbjct: 390 PKPGNSYI 397
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W T+I G + QP +A ++RMQV+ D + C QLG+ LG+ IH +
Sbjct: 19 WNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVL 78
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
++GL V + N L+ MY I A +FE M ++ W T+I G +EA++
Sbjct: 79 KHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIE 138
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
+F RM ++ +KP++ TF+ LSAC +G +++GRR + + G+ + +ID+
Sbjct: 139 LFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCI-DHTGLGNVVSVSNSLIDMY 197
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ G ++ A ++ +M N W +++ ++G G+ AL+ K+
Sbjct: 198 AKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHGH---GDEALELFSKM 244
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ G A G + A LF M E+ + +
Sbjct: 221 WNTMILGLAMHGHGDEALELFSKMLEEKLAT----------------------------- 251
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+E+ L L AC+ G VE G + + + Y + + +++D+ ++G + +A
Sbjct: 252 -PNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAY 310
Query: 131 QVFENMKNKS-VITWTTMIAGLALHG 155
++ ++M +S I W T++A +HG
Sbjct: 311 RLIKSMPIESNSIVWRTLLAACRVHG 336
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
AL+VF ++N W TMI GL +A + + RM+ + T+ ++ C
Sbjct: 4 ALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQ 63
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+G LG++ + N++K +G+E + ++ + G ++ A L MP ++ W
Sbjct: 64 LGSDLLGKQIHCNVLK--HGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMP-KSYLVAW 120
Query: 248 GSLLAASNIY 257
+++ N+Y
Sbjct: 121 NTIIDC-NVY 129
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 221/352 (62%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN ++AGY K G++ A LFE M +N++SWT +I+GY Q +A+ LF M +
Sbjct: 250 WNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGS 309
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+KP+ + +++ L ACAQ A+E G IH++ GL+ + AL MYAK + +A
Sbjct: 310 EMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEA 369
Query: 130 LQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
F+ + K++I W TMI A HG G EA+ +F M RA V+P+ +TF+ +LS C
Sbjct: 370 RCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCS 429
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL++ G +FN M + + +EP++E Y C++DLLGRAG L EA++L+ +MP +A ++W
Sbjct: 430 HSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVW 489
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LLAA + ++E+ E A + L LEP NSGNY +LSN+YA G W E K+R +++
Sbjct: 490 GALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQ 549
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G+KK PGCS+IE++ + H F+ D SHP +Y+ L + ++K A ++ +
Sbjct: 550 GMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPD 601
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ---MDQPNEAITLFRRMQVENV 71
MVA YA GDL++A +F+ + + + + ++I Y + + + RM +
Sbjct: 118 MVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGL 177
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + L +CA L V +G +H + GL + +LIDMY K G IG A +
Sbjct: 178 LGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARK 237
Query: 132 -------------------------------VFENMKNKSVITWTTMIAGLALHGLGREA 160
+FE M+++++++WT MI+G +G +A
Sbjct: 238 LFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQA 297
Query: 161 LDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRR 197
L +F M + + +KPN +T +++L AC +E GRR
Sbjct: 298 LGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR 336
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 91 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
++LG+ H I +GL L ++ MYA SG + A+ VF+ + N S + + ++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 151 LALHG---LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
HG L+ ++RM + + T +L +C + V +GR R G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHG-QGLRVG 211
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+E +ID+ + G + +A KL +M + A W +L+A G++ + E
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLF 270
Query: 268 QHLIKLEPHNSGNYAILSNIYAILGRWNES-GKIRKVMRDMG---------VKKMPGCSY 317
+ ++E N ++ + + Y G ++ G ++++D V +P C+
Sbjct: 271 E---RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327
Query: 318 ---IEVSKRVHEFVAGDTSH 334
+E +R+H+F G H
Sbjct: 328 SAALERGRRIHDFANGIGLH 347
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 215/346 (62%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ GYA+ ++ +A+ +F M EKNVI+W LIA YAQ + EA+ LF R++ E+V
Sbjct: 1064 TSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVW 1123
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVPLNNALIDMYAKSGKI 126
P L+AC + ++LG+ H ++ + +G + V + N+L+DMY K+G I
Sbjct: 1124 PTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 1183
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+VFE M + ++W MI G A +G ++AL +F RM ++ P+ +T I +LSAC
Sbjct: 1184 DDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSAC 1243
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLVE GRRYF M +GI P + Y CMIDLLGRAG+L+E E+L++ M E +A +
Sbjct: 1244 GHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVL 1303
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W SLL + ++ +VE+GE A L +L+P NSG Y +LSN+YA LG+W + ++R M+
Sbjct: 1304 WASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKH 1363
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GV K PGCS+IE+ ++V F+A D HP + ++ IL I QM
Sbjct: 1364 RGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMS 1409
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 4/265 (1%)
Query: 13 NTMVAGYAKVGDLNNARAL--FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N +V Y+K G L +A L FE+ +E++ SW +LI+GY + A+ +MQ E
Sbjct: 423 NALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE- 481
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P++ +AL+ACA + ++ G IH Y+ + G L + LIDMY K + ++
Sbjct: 482 VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSI 541
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++FE ++ VI W +MI G A G G LD+F M++ +K + +TF+ L +C G
Sbjct: 542 RIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEG 601
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V LGR YF +M I P+IE Y CMI+LLG+ G + E E + MPFE A+W +
Sbjct: 602 HVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRI 660
Query: 251 LAASNIYGDVELGECALQHLIKLEP 275
YG+ +LGE A + + P
Sbjct: 661 FDCCREYGNRKLGERAAKCINDSNP 685
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK AR +FE M E+N++SW +LI Y Q EA+ LF M PDE+ +
Sbjct: 937 YAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTL 996
Query: 79 LAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ +SACA L A G +H ++ + L+NAL+DMYAK G+ A VF+ M
Sbjct: 997 ASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMA 1056
Query: 138 NKSVIT-------------------------------WTTMIAGLALHGLGREALDMFSR 166
++SV++ W +IA A +G EAL +F R
Sbjct: 1057 SRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVR 1116
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKIEQY--GCMIDL 221
++R V P T+ +L+AC +V ++LG++ + +++K R+ P+ + + ++D+
Sbjct: 1117 LKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDM 1176
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G + + K+ RM N + W +++
Sbjct: 1177 YLKTGSIDDGAKVFERMAARDNVS-WNAMI 1205
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
+N + A G + +AR LF+LM ++ SW +I ++ P+EA++LF M
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG 146
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++P + M + LS CA+ + +H +I + + V L AL+D+Y + A
Sbjct: 147 IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADAR 206
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+ F+++ + I+W ++ L G+G A+DMF RM A V+P T + AC
Sbjct: 207 RAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNN 266
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+E G R + R+G E + ++D+ + G + A+ L P +
Sbjct: 267 ALEEG-RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK 316
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 128/253 (50%), Gaps = 5/253 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++V+G A G + +A+ +FE M E+N++SW ++ GY + A+ LF++M+ E +
Sbjct: 322 TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETRE 381
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA--L 130
D I + + LSAC + + GE +H + + G + L NAL+ MY+K G + A L
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+FE + +W ++I+G H + AL ++M+ + V PN+ TF + L+AC ++
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIF 500
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ G + M R G E +ID+ + + ++ P + +W S+
Sbjct: 501 LLKQGMQIHAYMI-RKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARP-SRDVILWNSM 558
Query: 251 LAASNIYGDVELG 263
+ G E G
Sbjct: 559 IFGCAYSGKGEYG 571
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N +++ +A++G +ARALF + + + S+ +IA AQ + +A+ M ++
Sbjct: 829 YNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDF 888
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + +ALSACA G +H + + V + +AL+DMYAK +A +
Sbjct: 889 VLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARR 948
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M +++++W ++I +G EAL +F M +A P+E+T +++SAC +
Sbjct: 949 VFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAA 1008
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
GR+ + ++KS E + ++D+ + G + A + RM
Sbjct: 1009 DREGRQVHARVVKSDRFREDMVLS-NALVDMYAKCGRTRAARCVFDRM 1055
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 44/313 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y L +AR F+ + E N ISW ++ Y + A+ +F RM V+
Sbjct: 190 TALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVR 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG-------- 124
P + A+ AC A+E G IH ++ ++G V + ++++DMYAK G
Sbjct: 250 PLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSL 309
Query: 125 -----------------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
+I A +VFE MK +++++W M+ G AL
Sbjct: 310 FNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGAL 369
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGR----RYFNIMKSRYGIEPKIEQYGC 217
+F +M + + + IT ++LSAC G++++G+ F I K + P ++
Sbjct: 370 LLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGEEVHAFAI-KCGFFSSPILKN--A 424
Query: 218 MIDLLGRAGYLQEAEKLLR-RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
++ + + G L+ AE+LL M E ++ W SL++ Y + E AL L K++
Sbjct: 425 LVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISG---YERHSMSEAALYALTKMQSE 481
Query: 277 NSGNYAILSNIYA 289
+ N + S+ A
Sbjct: 482 VTPNQSTFSSALA 494
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L N I+ A G + A ++F+ M + +W +I + G EAL +FS M
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG 146
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
++P + T ++LS CC L G R + ++ + + ++D+ G L +A
Sbjct: 147 IRPKDATMASVLS-CCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADA 205
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 273
+ + E NA W ++ ++ G +G+ A+ ++
Sbjct: 206 RRAFDDI-LEPNAISWNVIVRRYHLAG---MGDMAVDMFFRM 243
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 211/345 (61%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K GDL +A LFE + + N +SW ++IA E I F +M+
Sbjct: 173 KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRL 232
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++ DE +LA L AC LG +L E IH + G + + AL+D YAK G++ +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF + + WT M+AG A HGLGREA+ +F M ++P+ +TF +LSAC H
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV G+ YFN+M YGIEP+++ Y CM+DLLGR G L +A ++++ MP E NA +WG+
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++G++ELG+ +HLI +EP + NY +LSN+Y+ W ++ K+R ++++ G+
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL 472
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K+ PG S IE + H F GD SHP+ +++Y L ++ G+++ A
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKA 517
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 146/256 (57%), Gaps = 10/256 (3%)
Query: 7 LLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
LLY+ + +V Y K+G +A LF+ M K+++SW +LI+G+++ + ++T F
Sbjct: 69 LLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC--LHMSLTAF 126
Query: 64 RRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
M+ E +VKP+E+ +L+ +SAC+ GA++ G++IH + + G V + N+LI+MY K
Sbjct: 127 YTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGK 184
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A ++FE + + + ++W ++IA +G RE +D F++M R ++ +E T +A+
Sbjct: 185 SGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILAL 244
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H+G+ +L +M G KI ++D + G L + + + F A
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCT-GFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-A 302
Query: 243 NAAIWGSLLAASNIYG 258
+ W ++LA +G
Sbjct: 303 DRVAWTAMLAGYAAHG 318
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 209/340 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V L AR +F++M +N +SW+ +I GY D EA+ +FR MQ+ +
Sbjct: 211 STIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID 270
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ML L AC+ L A++ G H Y+ G T + NALIDMY+K GKI A +V
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +++W MI G +HGLG EAL +F + +KP++ITFI +LS+C H GLV
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 390
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
GR +F+ M + I P++E CM+D+LGRAG + EA +R MPFE + IW +LL+
Sbjct: 391 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++ELGE + + L P ++GN+ +LSNIY+ GRW+++ IR +D G+KK+
Sbjct: 451 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IE++ VH FV GD SH ++ + L ++ +MK
Sbjct: 511 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK 550
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 11/247 (4%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR LF+ + +VI W +I YA + AI L+ M V+P++ L AC+
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L A+E G IH++ + +GL + V + AL+D YAK G + +A ++F +M ++ V+ W M
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAM 181
Query: 148 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 207
IAG +L+GL +A+ + +M+ + PN T + +L C + R+ F++M R
Sbjct: 182 IAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC---QCLLYARKIFDVMGVRNE 238
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASNIYGDVELGE 264
+ + MI + ++EA + R M + + +L A + ++ G
Sbjct: 239 V-----SWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 293
Query: 265 CALQHLI 271
C+ +LI
Sbjct: 294 CSHGYLI 300
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 40/246 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G L A+ LF M+ ++V++W +IAG + ++A+ L +MQ E +
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ ++ L C L +YA+ ++
Sbjct: 208 PNSSTIVGVLPTCQCL------------------------------LYAR--------KI 229
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M ++ ++W+ MI G +EALD+F M+ + + P+ T + +L AC H+ +
Sbjct: 230 FDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 289
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + R G +ID+ + G + A ++ RM + W +++
Sbjct: 290 QHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMII 347
Query: 253 ASNIYG 258
I+G
Sbjct: 348 GYGIHG 353
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L AC Q ++ + IH + + N + + L +Y ++ A ++F+ + N
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
SVI W +I A +G A+D++ M V+PN+ T+ +L AC + +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ K +G+E + ++D + G L EA++L M + W +++A ++YG
Sbjct: 132 HSHAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
Query: 259 DVELGECALQHLIKLE-----PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L + A+Q +++++ P++S +L +L RK+ MGV+
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLL-------YARKIFDVMGVR 236
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 226/351 (64%), Gaps = 8/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN ++ GYAK DL AR +F M +++V+SW+ +I G + + EA+ +F M+
Sbjct: 132 WNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAVFEMMEATAA 191
Query: 69 --ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ V+ +++ M++ L ACA LG + G +H Y+E++G + L +L+DMYAK G I
Sbjct: 192 RHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLATSLVDMYAKCGAI 251
Query: 127 GKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+AL+VF+ ++N V+ W +I GLA+HG+ RE+L MF +ME A V P+EIT++++LS
Sbjct: 252 VEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVPDEITYLSLLS 311
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ +F ++++ G+ P +E Y C++D+LGRAG L+EA +++ MP + +
Sbjct: 312 ACVHGGLVDEAWSFFRSLEAQ-GLRPHVEHYACLVDVLGRAGRLEEAYGVVKSMPMKPSV 370
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
++ G+LL A +++G VELGE + L+ L+P + G Y LSNIYA+ RW E+ K RKVM
Sbjct: 371 SVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARRWQEAKKARKVM 430
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
+ GVKK+PG S I+V + + F+A D +HP +Y +L I MK +
Sbjct: 431 EERGVKKVPGFSEIDVGRGICRFIAQDKTHPGSAEIYALLKLIAMDMKMKD 481
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 41/200 (20%)
Query: 112 LNNALIDM-------------------------------YAKSGKIGKALQVFENMKNKS 140
++N+L+ M YAK + A +VF M +
Sbjct: 100 VSNSLVHMYAACALPGLARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRD 159
Query: 141 VITWTTMIAGLALHGLGREALDMFSRME--RAR---VKPNEITFIAILSACCHVGLVELG 195
V++W+ MI G G REAL +F ME AR V+ N++T +++L AC H+G + G
Sbjct: 160 VVSWSAMIDGCVKCGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRG 219
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAAS 254
R+ ++ +G I ++D+ + G + EA ++ + +P E + IW +++
Sbjct: 220 RKMHRYLEE-HGFPLNIRLATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGL 278
Query: 255 NIYGDVELGECALQHLIKLE 274
++G + +LQ K+E
Sbjct: 279 AVHG---MSRESLQMFQKME 295
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVG--DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-- 68
NTM+ YAK G DL AR +F+ M E++V+SW ++IA YAQ EAI L+ +M
Sbjct: 236 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 294
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+K + +A+ A L ACA GA++ G+ IHN + + GL V + +++DMY+K G++
Sbjct: 295 GGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEM 354
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F +K K++++W+ MI G +HG G+EAL++F+ M+R+ ++PN ITFI++L+AC H
Sbjct: 355 ASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSH 414
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL++ GR ++N MK +GIE +E YGCM+DLLGRAG L EA L++ M + +AAIWG
Sbjct: 415 AGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWG 474
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +VEL E +++ L +L+ NSG Y +LSNIYA W + +IR +++
Sbjct: 475 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRR 534
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG S E+ +++ F GD SHP +Y L K+ +M+ A ++ N S + + D
Sbjct: 535 IEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLD 594
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 122/238 (51%), Gaps = 9/238 (3%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSA 84
+AR F+ + + N + T + +GY + + ++ LFR M + DE A L A SA
Sbjct: 147 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 206
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--IGKALQVFENMKNKSVI 142
A++ + +H I + G + N ++D YAK G + A +VF+ M+ + V+
Sbjct: 207 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVV 265
Query: 143 TWTTMIAGLALHGLGREALDMFSRMER--ARVKPNEITFIAILSACCHVGLVELGRRYFN 200
+W +MIA A +G+ EA+ ++S+M +K N + A+L AC H G ++ G+R N
Sbjct: 266 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHN 325
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G+E + ++D+ + G ++ A + R++ E N W +++ ++G
Sbjct: 326 QV-VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK-EKNILSWSAMITGYGMHG 381
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 211/345 (61%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K GDL +A LFE + + N +SW ++IA E I F +M+
Sbjct: 173 KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRL 232
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++ DE +LA L AC LG +L E IH + G + + AL+D YAK G++ +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF + + WT M+AG A HGLGREA+ +F M ++P+ +TF +LSAC H
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLV G+ YFN+M YGIEP+++ Y CM+DLLGR G L +A ++++ MP E NA +WG+
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A ++G++ELG+ +HLI +EP + NY +LSN+Y+ W ++ K+R ++++ G+
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL 472
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K+ PG S IE + H F GD SHP+ +++Y L ++ G+++ A
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKA 517
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%), Gaps = 10/256 (3%)
Query: 7 LLYK---FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
LLY+ + +V Y K+G +A LF+ M K+++SW +LI+G+++ + ++T F
Sbjct: 69 LLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC--LHMSLTAF 126
Query: 64 RRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
M+ E +VKP+E+ +L+ +SAC GA++ G++IH + + G V + N+LI+MY K
Sbjct: 127 YTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGK 184
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
SG + A ++FE + + + ++W ++IA +G RE +D F++M R ++ +E T +A+
Sbjct: 185 SGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILAL 244
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L AC H+G+ +L +M G KI ++D + G L + + + F A
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCT-GFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-A 302
Query: 243 NAAIWGSLLAASNIYG 258
+ W ++LA +G
Sbjct: 303 DRVAWTAMLAGYAAHG 318
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 227/359 (63%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA GD + AR LF+ M ++ ++W LI YA+ + +A+ LF M+ ++ +
Sbjct: 160 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 219
Query: 73 --PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD++ + L AC+ LGA++ GE + Y E++G + + N+LI MY + G + KA
Sbjct: 220 SEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAY 279
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF KSV+TWT MI+GLA +G G +A+ +F M R+ V P+E TF +LSAC H G
Sbjct: 280 RVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSG 339
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA-EKLLRRMPFEANAAIWGS 249
LV+ G R+F++M+ YG++P + YGC++DL+GRAG L EA E + M +A IW +
Sbjct: 340 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRT 399
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G V+LGE + +LI+L+ +G+Y +L N YA +G W++ +IRK+M++ G+
Sbjct: 400 LLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGI 459
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ PGC+ +E + VHEF+A D +HP +Y+ L +I Q++ A ++ N S + + D
Sbjct: 460 QTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLD 518
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y + G ++ A +F +K+V++WT +I+G A N+AI++F M
Sbjct: 260 KVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRS 319
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIGK 128
+V PDE LSAC+ G V+ G + + +YGL V ++D+ ++G + +
Sbjct: 320 DVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDE 379
Query: 129 ALQVFEN-MKNKSVIT-WTTMIAGLALHG 155
A + N MK T W T++ +HG
Sbjct: 380 AYEFVTNEMKVAPDATIWRTLLGACRIHG 408
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ER 169
L +L+ YA G A ++F+ M + + W +I A + ++AL +F M +
Sbjct: 158 LATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKD 217
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYL 228
+ +P+++T I +L AC +G ++ G + + + YG E K+ +I + R G +
Sbjct: 218 SESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRN--SLITMYLRCGCV 275
Query: 229 QEAEKLLRRMPFEANAAIWGSLLA--ASNIYGD 259
+A ++ P + + W ++++ A+N +G+
Sbjct: 276 DKAYRVFSGTP-QKSVVTWTAMISGLAANGFGN 307
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 228/358 (63%), Gaps = 2/358 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY K GD+++A LF+ + KNV+SWT +I G+ + + EA+ FR MQ+ V
Sbjct: 160 WNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGV 219
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + ++A +SACA LGA+ LG W+H + + V + N+LIDMYA+ G I A Q
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++++W ++I G A++GL +AL F M++ ++PN +++ + L+AC H GL
Sbjct: 280 VFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGL 339
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G + F +K + P+IE YGC++DL RAG L+EA ++++MP N + GSLL
Sbjct: 340 IDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLL 399
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA GDVEL E +++ ++L P NY + SNIYA +G+W+ + K+R+ M++ G++K
Sbjct: 400 AACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQK 459
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 369
S IE+ +H+FV+GD H + D +Y L ++ ++ ++ +FSG ESDV
Sbjct: 460 NLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVP-DFSGK-ESDV 515
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 41/270 (15%)
Query: 26 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 85
N +L +SWT+ I+ + + + +A + F +M V+P+ I ++ LSAC
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 86 AQL---GAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGK--------------- 125
A ++ G +H + ++G +N ++ + ALIDMYAK GK
Sbjct: 98 AHSPSKTSITFGAALHTHAFKHGFAMNDVM-VGTALIDMYAKCGKLDYARLVFDQMGVRN 156
Query: 126 ----------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
+ AL++F+ + K+V++WT +I G EAL+ F M+
Sbjct: 157 LVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQL 216
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
A V P+ +T IAI+SAC ++G + LG +MK + ++ +ID+ R G +
Sbjct: 217 AGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCI 274
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ A ++ M + N W S++ + G
Sbjct: 275 ELARQVFDGMS-QRNLVSWNSIIVGFAVNG 303
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 39/231 (16%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ YA+ G + AR +F+ M+++N++SW ++I G+A ++A++ FR M+ E
Sbjct: 259 KVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKE 318
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGK 128
++P+ ++ +AL+AC+ G ++ G I I++ N+ + L+D+Y+++G++
Sbjct: 319 GLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRL-- 376
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+EA D+ +M + PNE+ ++L+AC
Sbjct: 377 -----------------------------KEAWDVIKKMP---MMPNEVVLGSLLAACRT 404
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQ-YGCMIDLLGRAGYLQEAEKLLRRM 238
G VEL + +MK + + P + Y ++ G A K+ R M
Sbjct: 405 QGDVELAEK---VMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREM 452
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 218/345 (63%), Gaps = 6/345 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++AGYAK ++ +A+ +F M EKNVI+W LIA YAQ + EAI LF +++ +++
Sbjct: 323 TSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIW 382
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVPLNNALIDMYAKSGKI 126
P L+AC + ++LG+ H ++ + +G + V + N+L+DMY K+G I
Sbjct: 383 PTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 442
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+VFE M + ++W MI G A +G ++AL +F RM + P+ +T I +LSAC
Sbjct: 443 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 502
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H GLV+ GRR+F+ M +GI P + Y CM+DLLGRAG+L+EAE+L++ MP E ++ +
Sbjct: 503 GHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 562
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W SLL A ++ +VELGE L +L+P NSG Y +LSN+YA +G+W + ++R+ M+D
Sbjct: 563 WASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKD 622
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
GV K PGCS+IE+ +++ F+A D HP + ++ L I +M
Sbjct: 623 RGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 141/276 (51%), Gaps = 38/276 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK +AR +F+ M E+NV+SW +LI Y Q EA+ LF M
Sbjct: 190 TALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFF 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A G +H + +++ L + LNNAL+DMYAK G+ +A
Sbjct: 250 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 309
Query: 132 VFENMKNKSVIT-------------------------------WTTMIAGLALHGLGREA 160
+F++M ++SV++ W +IA A +G EA
Sbjct: 310 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 369
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKIEQY-- 215
+ +F +++R + P T+ +L+AC ++ +++LG++ + +++K R+ P+ + +
Sbjct: 370 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 429
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G + + K+ RM N + W +++
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 464
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR------- 65
NT+V+ YA++G L AR +F+ + +N S+ L++ YA++ +P+EA LF
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 66 --------------------------MQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 99
M ++ + + +ALSACA + GE +H
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 100 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
+ + V + AL+DMYAK + A +VF+ M ++V++W ++I +G E
Sbjct: 176 LVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F M P+E+T +++SAC + GR+ M R + + ++
Sbjct: 236 ALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALV 295
Query: 220 DLLGRAGYLQEAEKLLRRMP 239
D+ + G EA + MP
Sbjct: 296 DMYAKCGRTWEARCIFDSMP 315
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 211/350 (60%), Gaps = 6/350 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T++ LL NT V D+ F M +K+++SW +I Y + P EA+ L
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDM------FFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+ RM+ + +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + KA VFENMK++ V++WT MI+ G G +A+ +FS+++ + + P+ I F+
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L+AC H GL+E GR F +M Y I P++E CM+DLLGRAG ++EA + ++ M E
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
N +WG+LL A ++ D ++G A L +L P SG Y +LSNIYA GRW E IR
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+M+ G+KK PG S +EV++ +H F+ GD SHP D +Y+ L + +MK
Sbjct: 537 IMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA + D+ +AR +F+ + E+NVI +I Y E + +F M NV+PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ G + +G IH + GL++ + + N L+ MY K G + +A V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + V++W +++ G A + +AL++ ME ++ + T ++L A + +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 251
Y M + G + + + MI + + EA +L RM FE +A S+L
Sbjct: 260 --MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 252 AASNIYGDVELGE 264
A + LG+
Sbjct: 317 PACGDTSALSLGK 329
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ Y K G L+ AR + + M+ ++V+SW +L+ GYAQ + ++A+ + R M+ +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D M + L A + NT + DM+ K GK
Sbjct: 239 HDAGTMASLLPAVS--------------------NTTTENVMYVKDMFFKMGK------- 271
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
KS+++W MI + + EA++++SRME +P+ ++ ++L AC +
Sbjct: 272 ------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG++ ++ R + P + +ID+ + G L++A + M + W ++++
Sbjct: 326 SLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMIS 383
Query: 253 ASNIYG 258
A G
Sbjct: 384 AYGFSG 389
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 52 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 111
++DQ + T+F QV + PD + +H+ I L
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPD----------------IRTLRTVHSRIILEDLRCNSS 75
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L L+ YA + A +VF+ + ++VI MI +G E + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 172 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
V+P+ TF +L AC G + +GR+ ++ G+ + ++ + G+ G+L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 232 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 284
+L M + W SL+ A N D L C +K+ H++G A L
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-HDAGTMASL 247
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G ++ A+ L + + + V+SW +++G++ + EA F M +K
Sbjct: 533 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L V
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK
Sbjct: 773 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 832
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 833 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 874
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y+ GD++ A ALF+ M + +V+SW L++GY Q E++ LF M V
Sbjct: 128 WNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 187
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD L +C+ L + LG +H + GL V +AL+DMY K + AL
Sbjct: 188 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 247
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W IAG + L++F M+R + ++ ++ + +C +
Sbjct: 248 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 307
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ GR+ + + +K+++ + + ++D+ +A L +A + +P
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAKANSLTDARRAFFGLP 354
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +F+ M +K+ +SW +IA Q ++ I F M +K
Sbjct: 432 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 491
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA L ++E G +H+ + + GL + + + ++DMY K G I +A ++
Sbjct: 492 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 551
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + + V++W +++G +L+ EA FS M +KP+ TF +L C ++ +
Sbjct: 552 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 611
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIW 247
ELG++ + I+K + I ++D+ + G + ++ EK+ +R NA I
Sbjct: 612 ELGKQIHGQIIKQEMLDDEYISS--TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 669
Query: 248 GSLL 251
G L
Sbjct: 670 GYAL 673
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK L +AR F + V + ++ G + EA+ LF+ M +++
Sbjct: 331 TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIR 390
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ SACA+ G+ +H + G + + +NNA++D+Y K + +A +
Sbjct: 391 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++W +IA L +G + + F+ M R +KP++ T+ ++L AC + +
Sbjct: 451 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 510
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G + ++KS G + + ++D+ + G + EA+KL R+ + W ++L
Sbjct: 511 EYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAIL 567
Query: 252 AASNIYGDVE 261
+ ++ + E
Sbjct: 568 SGFSLNKESE 577
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 230 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 289
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A +
Sbjct: 290 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 349
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 350 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 409
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++A
Sbjct: 410 FQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIA 467
Query: 253 A 253
A
Sbjct: 468 A 468
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDM-- 119
+ Q V P + +CAQ G E + ++ VP ++N L+ M
Sbjct: 47 QQQPPPVAPARVTFSRVFQSCAQAGR-EALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 105
Query: 120 -----------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
Y+ +G I A+ +F+ M + V++W +++G
Sbjct: 106 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 165
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G+ +E++D+F M R V P+ TF +L +C + + LG + + + + G+E
Sbjct: 166 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ-VHALAVKTGLEI 224
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++D+ G+ L +A MP E N WG+ +A
Sbjct: 225 DVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIA 265
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 211/339 (62%), Gaps = 1/339 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + A +F + KN++SW T+I GY+Q PNEA+ LF MQ + +K
Sbjct: 399 NALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLK 457
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ M L ACA L A+E G IH +I + G + + + AL+DMY K G + A Q+
Sbjct: 458 PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQL 517
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + K +I WT MIAG +HG G+EA+ F +M A ++P E +F +IL AC H GL+
Sbjct: 518 FDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLL 577
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + F+ MKS IEPK+E Y CM+DLL R+G L A K + MP + +AAIWG+LL+
Sbjct: 578 KEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ DVEL E +H+ +LEP N+ Y +L+N+YA +W E KI++ + G+K
Sbjct: 638 GCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
GCS+IEV + + F AGDTSHP + +L K+ +M
Sbjct: 698 QGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKM 736
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 160/280 (57%), Gaps = 13/280 (4%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F NT++ Y+K G+LN A +F M E ++SWT++IA + + EAI LF MQ +
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 355
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PD A+ + + ACA +++ G +HN+I++ + + +P++NAL++MYAK G + +A
Sbjct: 356 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEAN 415
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F + K++++W TMI G + + L EAL +F M++ ++KP+++T +L AC +
Sbjct: 416 LIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLA 474
Query: 191 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+E GR + +I+ R G + ++D+ + G L A++L +P + + +W
Sbjct: 475 ALEKGREIHGHIL--RKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTV 531
Query: 250 LLAASNIYGDVELGECALQHLIKL-----EPHNSGNYAIL 284
++A ++G G+ A+ K+ EP S +IL
Sbjct: 532 MIAGYGMHG---FGKEAISTFEKMRVAGIEPEESSFTSIL 568
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 136/264 (51%), Gaps = 5/264 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++A Y K G++ +AR LF+ +++++V+SW ++I+G + F +M V
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVD 256
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D ++ L ACA +G + LG +H Y + G + V NN L+DMY+K G + A +V
Sbjct: 257 VDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEV 316
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++++WT++IA GL EA+ +F M+ ++P+ +++ AC +
Sbjct: 317 FVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSL 376
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GR N +K + + + ++++ + G ++EA + ++P + N W +++
Sbjct: 377 DKGREVHNHIK-KNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIG 434
Query: 253 ASNIYGDVELGECALQHLIKLEPH 276
Y L ALQ + ++
Sbjct: 435 G---YSQNSLPNEALQLFLDMQKQ 455
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y GDL R +F+ + + W L++ YA++ E++ LF +MQ ++ D
Sbjct: 98 LVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGD 157
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L A V + +H Y+ + G + + N+LI Y K G++ A +F+
Sbjct: 158 SYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFD 217
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ ++ V++W +MI+G ++G R L+ F +M V + T + +L AC +VG + L
Sbjct: 218 ELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTL 277
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR + + G + ++D+ + G L A ++ +M E W S++AA
Sbjct: 278 GRA-LHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMG-ETTIVSWTSIIAA 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 36 TEKNV-ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
T NV + I + +M A+ L R Q ++ + + L CA+L ++E G
Sbjct: 19 THNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDG 76
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+ +H+ I G+ L L+ MY G + K ++F+ + N + W +++ A
Sbjct: 77 KRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKI 136
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV-ELGRRYFNIMKSRYGIEPKIE 213
G RE++ +F +M+ ++ + TF +L V E R + ++K +G
Sbjct: 137 GNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFG------ 190
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAIWGSLLAASNIYG 258
Y +++ L A Y + E R+ F+ + W S+++ + G
Sbjct: 191 SYNAVVNSL-IAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 227/359 (63%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ YA GD + AR LF+ M ++ ++W LI YA+ + +A+ LF M+ ++ +
Sbjct: 174 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 233
Query: 73 --PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD++ + L AC+ LGA++ GE + Y E++G + + N+LI MY + G + KA
Sbjct: 234 SEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAY 293
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF KSV+TWT MI+GLA +G G +A+ +F M R+ V P+E TF +LSAC H G
Sbjct: 294 RVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSG 353
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA-EKLLRRMPFEANAAIWGS 249
LV+ G R+F++M+ YG++P + YGC++DL+GRAG L EA E + M +A IW +
Sbjct: 354 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRT 413
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G V+LGE + +LI+L+ +G+Y +L N YA +G W++ +IRK+M++ G+
Sbjct: 414 LLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGI 473
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ PGC+ +E + VHEF+A D +HP +Y+ L +I Q++ A ++ N S + + D
Sbjct: 474 QTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLD 532
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y + G ++ A +F +K+V++WT +I+G A N+AI++F M
Sbjct: 274 KVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRS 333
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIGK 128
+V PDE LSAC+ G V+ G + + +YGL V ++D+ ++G + +
Sbjct: 334 DVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDE 393
Query: 129 ALQVFEN-MKNKSVIT-WTTMIAGLALHG 155
A + N MK T W T++ +HG
Sbjct: 394 AYEFVTNEMKVAPDATIWRTLLGACRIHG 422
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ER 169
L +L+ YA G A ++F+ M + + W +I A + ++AL +F M +
Sbjct: 172 LATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKD 231
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYL 228
+ +P+++T I +L AC +G ++ G + + + YG E K+ +I + R G +
Sbjct: 232 SESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRN--SLITMYLRCGCV 289
Query: 229 QEAEKLLRRMPFEANAAIWGSLLA--ASNIYGD 259
+A ++ P + + W ++++ A+N +G+
Sbjct: 290 DKAYRVFSGTP-QKSVVTWTAMISGLAANGFGN 321
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 207/346 (59%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE+M EK++ SW ++++ + Q + + L RM ++
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQ 335
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVPLNNALIDMYAKSGKI 126
PD + + L AC+ L A+ G IH Y+ GL V L NA+IDMYAK G +
Sbjct: 336 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 395
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC
Sbjct: 396 RDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L MP EAN +
Sbjct: 456 SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 515
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+ E ++R MR
Sbjct: 516 WRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQ 575
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
V+K PGCS+IE+ VH FV+ D +HP+ +Y L + +++
Sbjct: 576 QNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLR 621
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 7 LLYKFW--------NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
LL+KF + +V Y K G + +A+ FE + ++V+ W ++ GYAQ+ Q
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
+ FRRM E+V P + LS A +G + G IH + + G ++ V ++N+LID
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MY K I AL++FE M+ K + +W ++++ G L + RM A ++P+ +T
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEK 233
+L AC H+ + GR M S G + K + +ID+ + G +++A
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
+ RM + A W ++ ++G
Sbjct: 401 VFERMS-NKDVASWNIMIMGYGMHG 424
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 6/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+++ Y+K +N A ++F T E NV ++ +I+G+ P E +++M+ E V
Sbjct: 76 TSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGV 135
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ A+ AC L +E+ + IH + ++GL V + +AL++ Y K G + A
Sbjct: 136 IPDKFTFPCAIKAC--LDVLEIKK-IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV 192
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE + + V+ W M+ G A G L+ F RM V P+ T +LS +G
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G R + + G + + +ID+ G+ +++A ++ M E + W S++
Sbjct: 253 LNNG-RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIV 310
Query: 252 AASNIYGD 259
+ GD
Sbjct: 311 SVHEQCGD 318
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 218/343 (63%), Gaps = 3/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ +++ GY K+G++ AR +F + +++V++WT +I GY Q N+A+ LFR M E
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS + L +E G+ IH + G ++ + NALI MYAK+G I A +
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465
Query: 132 VFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ N K K +++WT+MI LA HGLG+EA+++F RM +KP+ IT++ +LSAC HV
Sbjct: 466 VFDLPNGK-KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHV 524
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR+Y+N+M + IEP + Y CMIDL GRAG LQEA + MP E + WGS
Sbjct: 525 GLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGS 584
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLA+ I+ + +L + A + L+ ++P NSG Y L+N+Y+ G+W + + RK+M+D GV
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGV 644
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K G S+I + VH F D HP D +Y+++ +I ++K
Sbjct: 645 RKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 32/218 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GYAK G+ +R L M + + +SWT +I GY Q + AI +F +M E V
Sbjct: 79 WNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERV 138
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--------- 122
P + + LS+CA +++G IH+++ + GL + VP+ +L++MYAK
Sbjct: 139 PPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKV 198
Query: 123 ----------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
SG+ A FE M ++ +++W +MI+G + G EA
Sbjct: 199 VFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
L +FS+M +KP+ T +ILSAC ++ + +G++
Sbjct: 259 LAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G +H I + GL+ V L N L+ YAK+G + A VF+ M KS +W T+I+G A
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 154 H-------------------------------GLGREALDMFSRMERARVKPNEITFIAI 182
GL A+ MF++M RV P++ T +
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
LS+C +++GR+ + + + G+ + ++++ + G A+ + RM +
Sbjct: 149 LSSCAANQTLDIGRKIHSFV-VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK- 206
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHL 270
N + W +L++ G EL + +
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKM 234
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G ++ A+ L + + + V+SW +++G++ + EA F M +K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L V
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 791 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y+ GD++ A ALF+ M + +V+SW L++GY Q E++ LF M V
Sbjct: 86 WNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD L +C+ L + LG +H + GL V +AL+DMY K + AL
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W IAG + L++F M+R + ++ ++ + +C +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ GR+ + + +K+++ + + ++D+ +A L +A + +P
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAKANSLTDARRAFFGLP 312
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +F+ M +K+ +SW +IA Q ++ I F M +K
Sbjct: 390 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 449
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA L ++E G +H+ + + GL + + + ++DMY K G I +A ++
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + + V++W +++G +L+ EA FS M +KP+ TF +L C ++ +
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIW 247
ELG++ + I+K + I ++D+ + G + ++ EK+ +R NA I
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISS--TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627
Query: 248 GSLL 251
G L
Sbjct: 628 GYAL 631
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK L +AR F + V + ++ G + EA+ LF+ M +++
Sbjct: 289 TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIR 348
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ SACA+ G+ +H + G + + +NNA++D+Y K + +A +
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K ++W +IA L +G + + F+ M R +KP++ T+ ++L AC + +
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
E G + ++KS G + + ++D+ + G + EA+KL R+ + W ++L
Sbjct: 469 EYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAIL 525
Query: 252 AASNIYGDVE 261
+ ++ + E
Sbjct: 526 SGFSLNKESE 535
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A +
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++A
Sbjct: 368 FQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIA 425
Query: 253 A 253
A
Sbjct: 426 A 426
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDM-- 119
+ Q V P + +CAQ G E + ++ VP ++N L+ M
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGR-EALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 63
Query: 120 -----------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
Y+ +G I A+ +F+ M + V++W +++G
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G+ +E++D+F M R V P+ TF +L +C + + LG + + + + G+E
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ-VHALAVKTGLEI 182
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++D+ G+ L +A MP E N WG+ +A
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIA 223
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 13 NTMVAGYAKVG--DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
NTM+ YAK G DL AR +F+ M E++V+SW ++IA YAQ EAI L+ +M
Sbjct: 237 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 295
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+K + +A+ A L ACA GA++ G+ IHN + + GL V + +++DMY+K G++
Sbjct: 296 GGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEM 355
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A + F +K K++++W+ MI G +HG G+EAL++F+ M+R+ ++PN ITFI++L+AC H
Sbjct: 356 ASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSH 415
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GL++ GR ++N MK +GIE +E YGCM+DLLGRAG L EA L++ M + +AAIWG
Sbjct: 416 AGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWG 475
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL+A I+ +VEL E +++ L +L+ NSG Y +LSNIYA W + +IR +++
Sbjct: 476 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRR 535
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
++K PG S E+ +++ F GD SHP +Y L K+ +M+ A ++ N S + + D
Sbjct: 536 IEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLD 595
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 9/216 (4%)
Query: 49 GYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 106
GY + + ++ LFR M + DE A L A SA A++ + +H I + G
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 107 NTIVPLNNALIDMYAKSGK--IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
+ N ++D YAK G + A +VF+ M+ + V++W +MIA A +G+ EA+ ++
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLY 288
Query: 165 SRMER--ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 222
S+M +K N + A+L AC H G ++ G+R N + R G+E + ++D+
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQV-VRMGLEENVYVGTSIVDMY 347
Query: 223 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G ++ A + R++ E N W +++ ++G
Sbjct: 348 SKCGRVEMASRAFRKIK-EKNILSWSAMITGYGMHG 382
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 214/342 (62%), Gaps = 1/342 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+N A+ +F+ + +++V++WT +I GY Q EAI LFR M E
Sbjct: 350 FTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQ 409
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS + L ++ G+ IH + G V ++NALI MYAK+G I A +
Sbjct: 410 RPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASR 469
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F+ ++ + ++WT+MI LA HG EAL++F M ++P+ IT++ + SAC H G
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV GR+YF++MK I P + Y CM+DL GRAG LQEA++ + +MP E + WGSL
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A +Y +++LG+ A + L+ LEP NSG Y+ L+N+Y+ G+W E+ KIRK M+D VK
Sbjct: 590 LSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVK 649
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S+IEV +VH F D HP + +Y + KI ++K
Sbjct: 650 KEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIK 691
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 139/259 (53%), Gaps = 35/259 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++ YAK GD++++ F+ + +++ +SWTT+I GY + Q ++AI + M E +
Sbjct: 83 WNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGI 142
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------- 124
+P + + L++ A +E G+ +H++I + GL V ++N+L++MYAK G
Sbjct: 143 EPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 125 ---------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
++G+ A+ FE M + ++TW +MI+G G A
Sbjct: 203 VFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262
Query: 161 LDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
LDMFS+M R + + P+ T ++LSAC ++ + +G + + +I+ + + I + +
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV--LNAL 320
Query: 219 IDLLGRAGYLQEAEKLLRR 237
I + R G ++ A +L+ +
Sbjct: 321 ISMYSRCGGVETARRLIEQ 339
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 37/285 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M+A + +VG ++ A A FE M E+++++W ++I+GY Q A+ +F +M ++
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSM 274
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 124
+ PD + + LSACA L + +GE IH++I G + + NALI MY++ G
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 125 ------------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLG 157
K+G +A +F+++K++ V+ WT MI G HGL
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLY 394
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYG 216
EA+++F M +PN T A+LS + + G++ + + +KS G +
Sbjct: 395 GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS--GEIYSVSVSN 452
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+I + +AG + A + + E + W S++ A +G E
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
N ++ YAK G + + + F+ + + ++WTTMI G G +A+ + M R ++
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P++ T +L++ +E G++ + + + G+ + ++++ + G A+
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 234 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 270
+ RM + + + W +++A G ++L + +
Sbjct: 203 VFDRMVVK-DISSWNAMIALHMQVGQMDLAMAQFEQM 238
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 232/368 (63%), Gaps = 16/368 (4%)
Query: 13 NTMVAGYAKVGDLNNA--RALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N +++ YA+ G A R +F+ M ++++SW +++ +AQ +A+ L+RRM+
Sbjct: 195 NCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALELYRRMRS 254
Query: 69 ---ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKS 123
V+PD + ++ LS+ A LGA +G + +Y+ Q G +T V L NALI+ +A+
Sbjct: 255 PEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQLCNALINFHARC 314
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + +A Q+F+ M KS+++WT +I G +HG G A+ +F RM ++P+ + +A+
Sbjct: 315 GSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEGIRPDNVAMVALF 374
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
SAC H GL + GRRYF+ M+S Y + P +E Y CM+DLLGRAG L+EA +L+ MP A+
Sbjct: 375 SACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPAD 434
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
A+WG+LL A I+ +V++GE A +I+LEP N G Y ++SNIY G+ + ++R +
Sbjct: 435 GAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQLDCVARVRAM 494
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 363
MR+ G+KK PGCSY+E RVH F+A D SHP R+Y+++ ++ E + E SG
Sbjct: 495 MRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQARRIYELVIRL-------ELMVKEKSG 547
Query: 364 VLESDVAS 371
+ ES+VA+
Sbjct: 548 MRESEVAA 555
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNV------ISWTTLIAGYAQMDQPNEAITLFRRM 66
+ ++ Y+++G L A L + M ++ ++ ++I+G A P + LFRRM
Sbjct: 92 SALLTSYSRLGCLPLAHQLLDEMPLESTPHTTLRTAFNSVISGCALHALPVASFALFRRM 151
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ V D + +LA + A + + +H + GL T + N L+ YA+ G
Sbjct: 152 RAAAVGFDAVTLLALVPAT----PLSVVPQVHALAARVGLATETSVANCLMSTYARGGAF 207
Query: 127 GKAL--QVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITF 179
G AL +VF+ M ++ +++W +++ A +GL +AL+++ RM E + V+P+ +T
Sbjct: 208 GAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALELYRRMRSPEGSGVEPDAVTI 267
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRY-GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ +LS+ H+G +G + ++ R G ++ +I+ R G L A++L M
Sbjct: 268 VGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQLCNALINFHARCGSLPRAQQLFDEM 327
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
P ++ + W +L+ ++G+ ++ + ++ + P N A+ S
Sbjct: 328 PRKSIVS-WTALITGHGMHGNGDVAVSLFERMVSEGIRPDNVAMVALFS 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W+ + ++ + E++ L R + P +A+ A++ +CA L IH
Sbjct: 20 WSARVRTLTRLGRHRESLALLRHGD-PSPPPHALALPASVISCAALSLPSGVAQIHALAA 78
Query: 103 QYGLNTIVP--LNNALIDMYAKSGKIGKALQVFENMKNKSV------ITWTTMIAGLALH 154
+ GL L +AL+ Y++ G + A Q+ + M +S + ++I+G ALH
Sbjct: 79 KRGLLPAADAYLLSALLTSYSRLGCLPLAHQLLDEMPLESTPHTTLRTAFNSVISGCALH 138
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
L + +F RM A V + +T +A++ A + ++ + + +R G+ +
Sbjct: 139 ALPVASFALFRRMRAAAVGFDAVTLLALVPATPLSVVPQV-----HALAARVGLATETSV 193
Query: 215 YGCMIDLLGRAGYLQE--AEKLLRRMPFEANAAI-WGSLLAA 253
C++ R G A ++ MP + + W ++L+A
Sbjct: 194 ANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSA 235
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 218/344 (63%), Gaps = 6/344 (1%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
+++AGYAK ++ +A+ +F M EKNVI+W LIA YAQ + EAI LF +++ +++ P
Sbjct: 82 SILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 141
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVPLNNALIDMYAKSGKIG 127
L+AC + ++LG+ H ++ + +G + V + N+L+DMY K+G I
Sbjct: 142 THYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 201
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+VFE M + ++W MI G A +G ++AL +F RM + P+ +T I +LSAC
Sbjct: 202 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 261
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ GRR+F+ M +GI P + Y CM+DLLGRAG+L+EAE+L++ MP E ++ +W
Sbjct: 262 HSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLW 321
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
SLL A ++ +VELGE L +L+P NSG Y +LSN+YA +G+W + ++R+ M+D
Sbjct: 322 ASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDR 381
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
GV K PGCS+IE+ +++ F+A D HP + ++ L I +M
Sbjct: 382 GVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 425
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 111/216 (51%), Gaps = 38/216 (17%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A G +H + +++ L + LNNAL+DMYAK G+ +A
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 132 VFENMKNKSVIT-------------------------------WTTMIAGLALHGLGREA 160
+F++M ++SV++ W +IA A +G EA
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 127
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKIEQY-- 215
+ +F +++R + P T+ +L+AC ++ +++LG++ + +++K R+ P+ + +
Sbjct: 128 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 187
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++D+ + G + + K+ RM N + W +++
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 222
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y K G +++ +FE M ++ +SW +I GYAQ + +A+ LF RM N
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN 247
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + M+ LSAC G V+ G H E +G+ ++D+ ++G + +A +
Sbjct: 248 PDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEE 307
Query: 132 VFENMKNK-SVITWTTMIAGLALH 154
+ ++M + + W +++ LH
Sbjct: 308 LIKDMPTEPDSVLWASLLGACRLH 331
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G ++ A+ L + + + V+SW +++G++ + EA F M +K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L V
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 791 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y+ GD++ A ALF+ M + +V+SW L++GY Q E++ LF M V
Sbjct: 86 WNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD L +C+ L + LG +H + GL V +AL+DMY K + AL
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W IAG + L++F M+R + ++ ++ + +C +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ GR+ + + +K+++ + + ++D+ +A L +A + +P
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAKANSLTDARRAFFGLP 312
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +F+ M +K+ +SW +IA Q ++ I F M +K
Sbjct: 390 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 449
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA L ++E G +H+ + + GL + + + ++DMY K G I +A ++
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + + V++W +++G +L+ EA FS M +KP+ TF +L C ++ +
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIW 247
ELG++ + I+K + I ++D+ + G + ++ EK+ +R NA I
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISS--TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627
Query: 248 GSLL 251
G L
Sbjct: 628 GYAL 631
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 10 KFWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 63
KF + V G YAK L +AR F + V + ++ G + EA+ LF
Sbjct: 280 KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLF 339
Query: 64 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 123
+ M +++ D +++ SACA+ G+ +H + G + + +NNA++D+Y K
Sbjct: 340 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKC 399
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
+ +A +F+ MK K ++W +IA L +G + + F+ M R +KP++ T+ ++L
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 184 SACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
AC + +E G + ++KS G + + ++D+ + G + EA+KL R+ +
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKCGIIDEAQKLHDRIGGQ- 516
Query: 243 NAAIWGSLLAASNIYGDVE 261
W ++L+ ++ + E
Sbjct: 517 QVVSWNAILSGFSLNKESE 535
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A +
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++A
Sbjct: 368 FQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIA 425
Query: 253 A 253
A
Sbjct: 426 A 426
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDM-- 119
+ Q V P + +CAQ G E + ++ VP ++N L+ M
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGR-EALAAGRAAHARMVVSGFVPNAFVSNCLLQMYA 63
Query: 120 -----------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
Y+ +G I A+ +F+ M + V++W +++G
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G+ +E++D+F M R V P+ TF +L +C + + LG + + + + G+E
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ-VHALAVKTGLEI 182
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++D+ G+ L +A MP E N WG+ +A
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIA 223
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 221/352 (62%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN ++AGY K G++ A LFE M +N++SWT +I+GY Q +A+ LF M +
Sbjct: 176 WNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGS 235
Query: 71 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+KP+ + +++ L ACAQ A+E G IH++ GL+ + AL MYAK + +A
Sbjct: 236 EMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEA 295
Query: 130 LQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
F+ + K++I W TMI A HG G EA+ +F M RA V+P+ +TF+ +LS C
Sbjct: 296 RCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCS 355
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GL++ G +FN M + + +EP++E Y C++DLLGRAG L EA++L+ +MP +A ++W
Sbjct: 356 HSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVW 415
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+LLAA + ++E+ E A + L LEP NSGNY +LSN+YA G W E K+R +++
Sbjct: 416 GALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQ 475
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
G+KK PGCS+IE++ + H F+ D SHP +Y+ L + ++K A ++ +
Sbjct: 476 GMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPD 527
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 33/168 (19%)
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+ RM + D + L +CA L V +G +H + GL + +LIDMY K
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 123 SGKIGKALQ-------------------------------VFENMKNKSVITWTTMIAGL 151
G IG A + +FE M+++++++WT MI+G
Sbjct: 155 CGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214
Query: 152 ALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRR 197
+G +AL +F M + + +KPN +T +++L AC +E GRR
Sbjct: 215 TQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR 262
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 214/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV G ++G +++AR +F+ M +N++SW ++I+GY + D+ +A+ +F M+ V
Sbjct: 167 WTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGV 226
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + +AL AC GA+ G I+ ++EQ G+ L A++DMY K G + +A +
Sbjct: 227 EGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWR 286
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+++ + + TW MI G A+HG +AL++F +ME A V P+++T + +L+AC H G
Sbjct: 287 VFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGE 346
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRRY N + SR+GIEPK E YGCM+DL GRAG L EA+K++ MP + + A+ G+LL
Sbjct: 347 VSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALL 406
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+GDV+LGE +I L+P NSG Y +L+N+ A GRW+E GK+R++M + V K
Sbjct: 407 GACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDERNVSK 466
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S IEV EF G+ HP +Y + + +++
Sbjct: 467 EAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIR 507
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y K G ++ A +F+ + + + +W +I G+A + ++A+ LF +M+
Sbjct: 266 KLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAA 325
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V PD++ +L L+ACA G V G ++++ + ++G+ ++D++ ++G++ +
Sbjct: 326 GVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDE 385
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG 155
A +V + M + + ++ +HG
Sbjct: 386 AKKVIDEMPMDPDLAVLGALLGACKIHG 413
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 222/353 (62%), Gaps = 18/353 (5%)
Query: 19 YAKVGDLNNARALFELMTEKNVIS------------------WTTLIAGYAQMDQPNEAI 60
Y K G +AR +F+ M E++V++ WT +I G + + N A+
Sbjct: 175 YGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRAL 234
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+FR MQ E+V P+E+ ++ LSAC++LGA++LG W+ +Y++++ + + ALI+MY
Sbjct: 235 EVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMY 294
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
++ G I +A +VFE MK K+VIT+ +MI G ALHG EA+++F + + P+ +TF+
Sbjct: 295 SRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFV 354
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
+L+AC H GL ELG F+ M YGIEP+IE YGCM+DLLGR G L+EA +R M
Sbjct: 355 GVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKV 414
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
+ + G+LL+A I+G++EL E + L+ + +SG Y +LSN Y+ G+W E+ ++
Sbjct: 415 APDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEV 474
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
R MR+ G++K PGCS IEV+ +HEF+ GD HP +++Y+ L ++N ++
Sbjct: 475 RTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRL 527
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 20/249 (8%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A +F NV +T LI G + I L+ +M ++ PD A+ + L AC
Sbjct: 83 ASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC 142
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT---- 143
A++ G +H+ + + GL++ + LI++Y K G A +VF+ M + V+
Sbjct: 143 HLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVM 202
Query: 144 --------------WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
WT MI GL +G AL++F M+R V PNE+T + +LSAC +
Sbjct: 203 INYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSEL 262
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G ++LGR + M ++ IE G +I++ R G + EA+++ +M E N + S
Sbjct: 263 GALQLGRWVRSYM-DKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMK-EKNVITYNS 320
Query: 250 LLAASNIYG 258
++ ++G
Sbjct: 321 MIMGFALHG 329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
L+ + + IG A ++F + +N +V +T +I GL L + + ++ +M + + P+
Sbjct: 70 LLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPD 129
Query: 176 EITFIAILSAC-CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
++L AC CH+ L E + ++K G+ +I+L G+ G ++A ++
Sbjct: 130 SYAVTSVLKACGCHLALKEGREVHSQVLK--LGLSSNRSIRIKLIELYGKCGAFEDARRV 187
Query: 235 LRRMP 239
MP
Sbjct: 188 FDEMP 192
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 215/339 (63%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YAK ++ AR +F+ M +KN+ +W+ +I GY+++ NEA+ LFR MQ +V PDE+
Sbjct: 173 YAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVT 232
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SACA+ GA++LG W+H +I++ G+ + L+ ALIDMYAK G I +A VF+ M
Sbjct: 233 MVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMA 292
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ W+ MI GLA+HGL AL +FSRM +V+PN +TFI +LSAC H GLV GRR
Sbjct: 293 ERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRR 352
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y++ M+ GI+P +E YGCM+DL R+ L EA + M N+ IW +LL AS
Sbjct: 353 YWSTMQ-ELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNS 411
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++ + A + L++LEP N NY +LSN+YA +W+ +RK M++ V + GCS
Sbjct: 412 NRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSS 471
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +H+FV D SHP+ + +L +I ++ A H
Sbjct: 472 IEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGH 510
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 148/290 (51%), Gaps = 10/290 (3%)
Query: 28 ARALFELMTEKNVISWTTLI---AGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALS 83
AR LF+ + E + +LI + A + + + ++RRM + + P+ + AL
Sbjct: 77 ARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 136
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVI 142
AC+ + A+ G +H+ + GL + L+++YAK ++ A VF+ M +K++
Sbjct: 137 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 196
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W+ MI G + G+ EAL +F M+ A V P+E+T ++++SAC G ++LG R+ +
Sbjct: 197 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLG-RWVHAF 255
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
R GI +E +ID+ + G ++ A+ + M E + W +++ I+G VE+
Sbjct: 256 IDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMA-ERDTKAWSAMIVGLAIHGLVEV 314
Query: 263 GECALQHL--IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +K+ P+N +LS A G NE + M+++G+K
Sbjct: 315 ALKLFSRMLELKVRPNNVTFIGVLSAC-AHSGLVNEGRRYWSTMQELGIK 363
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 218/343 (63%), Gaps = 3/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ +++ GY K+G++ AR +F + +++V++WT +I GY Q N+A+ LFR M E
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS + L +E G+ IH + G ++ + NALI MYAK+G I A +
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465
Query: 132 VFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ N K K +++WT+MI LA HGLG+EA+++F RM +KP+ IT++ +LSAC HV
Sbjct: 466 VFDLPNGK-KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHV 524
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE GR+Y+N+M + IEP + Y CMIDL GRAG LQEA + MP E + WGS
Sbjct: 525 GLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGS 584
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LLA+ I+ + +L + A + L+ ++P NSG Y L+N+Y+ G+W + + RK+M+D GV
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGV 644
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+K G S+I + VH F D HP D +Y+++ +I ++K
Sbjct: 645 RKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 32/218 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT+++GYAK G+ +R L M + + +SWT +I GY Q + AI +F +M E V
Sbjct: 79 WNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERV 138
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--------- 122
P + + LS+CA +++G IH+++ + GL + VP+ +L++MYAK
Sbjct: 139 PPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKV 198
Query: 123 ----------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
SG+ A FE M ++ +++W +MI+G + G EA
Sbjct: 199 VFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
L +FS+M +KP+ T +ILSAC ++ + +G++
Sbjct: 259 LVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G +H I + GL+ V L N L+ YAK+G + A VF+ M KS +W T+I+G A
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 154 H-------------------------------GLGREALDMFSRMERARVKPNEITFIAI 182
GL A+ MF++M RV P++ T +
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
LS+C +++GR+ + + + G+ + ++++ + G A+ + RM +
Sbjct: 149 LSSCAANQTLDIGRKIHSFV-VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK- 206
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHL 270
N + W +L++ G EL + +
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKM 234
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 218/342 (63%), Gaps = 2/342 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVEN 70
T++ YA+ G ++ A A+F+ M KNV+SW+ +IA YA+ +P EA+ LFR M +
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P+ + M++ L ACA A+E G+ IH YI + GL++I+P+ +ALI MYA+ GK+
Sbjct: 273 SVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQ 332
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M K V+ W ++I+ LHG GR+A+ +F M P+ I+FI++L AC H G
Sbjct: 333 LIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTG 392
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G++ F M +GI+P +E Y CM+DLLGRA L EA K++ + E +WGSL
Sbjct: 393 LVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSL 452
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+ VEL E A + L KLEP N+GNY +L++IYA W+E +++K++ ++
Sbjct: 453 LGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQ 512
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K+PG S+IEV ++++ F + D +P ++L+ +L ++ +MK
Sbjct: 513 KVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMK 554
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 8/250 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ ++++ ++NAR +F+ ++ + W L A + N+ + L+ RM + V D
Sbjct: 110 LINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSD 169
Query: 75 EIAMLAALSACAQ----LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
L AC + ++ G+ IH +I ++G V + L+DMYA+ G + A
Sbjct: 170 RFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYAS 229
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCH 188
VF+ M K+V++W+ MIA A +G EAL++F M PN +T +++L AC
Sbjct: 230 AVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA 289
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+E G+ + R G++ + +I + R G L+ + + RM + + +W
Sbjct: 290 FAALEQGKLIHAYILRR-GLDSILPVISALITMYARCGKLESGQLIFDRM-HKKDVVLWN 347
Query: 249 SLLAASNIYG 258
SL+++ ++G
Sbjct: 348 SLISSYGLHG 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + G + L LI+M+++ + A +VF+ + +++ W + LAL G
Sbjct: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
Query: 157 GREALDMFSRMERARVKPNEITFIAILSAC----CHVGLVELGRR-YFNIMKSRYGIEPK 211
G + L+++ RM V + T+ +L AC C V ++ G+ + +I++ YG
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-- 208
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++D+ R G + A + MP + N W +++A
Sbjct: 209 VHVMTTLMDMYARFGCVSYASAVFDEMPVK-NVVSWSAMIA 248
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 215/333 (64%), Gaps = 1/333 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y K G++ +A +F+ M + NV+SW +I+GY ++ EA+ +F M+ VK
Sbjct: 539 SSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVK 598
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + L AC+QL +E G+ IHN+I + L + AL+DMYAK G + +AL +
Sbjct: 599 PDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHI 658
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + ++WT+MIA HG EAL +F +M+++ KP+++TF+AILSAC H GLV
Sbjct: 659 FNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLV 718
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAIWGSLL 251
+ G YFN M + YG +P +E Y C+IDLLGR G L+EA ++L+R P + + +L
Sbjct: 719 DEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLF 778
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +++ ++LGE + LI+ +P + Y ILSN+YA + +W+E K+R ++++G+KK
Sbjct: 779 SACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKK 838
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IEV KR+H FV D SHP D +Y+ +
Sbjct: 839 NPGCSWIEVGKRIHPFVVEDKSHPQADMIYECM 871
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 143/250 (57%), Gaps = 10/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G L A+ +FE + KNV+SW ++IAGY+ I LFRRM E ++
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + L AC++ ++LG++IH YI + + + +N++LID+Y K G IG A V
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+NM +V++W MI+G G EAL +F+ M +A VKP+ ITF ++L AC + ++
Sbjct: 558 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617
Query: 193 ELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+ N + IE K+E G ++D+ + G + EA + ++P E + W
Sbjct: 618 EKGKEIHNFI-----IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWT 671
Query: 249 SLLAASNIYG 258
S++AA +G
Sbjct: 672 SMIAAYGSHG 681
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 159/328 (48%), Gaps = 49/328 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ V YAK +A LF+ M E++V SW +I+ Y Q QP +A+ LF M+V K
Sbjct: 337 SSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFK 396
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + +S+CA+L +E G+ IH + + G +++AL+DMY K G + A +V
Sbjct: 397 PDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEV 456
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ K+V++W +MIAG +L G + +++F RM+ ++P T +IL AC +
Sbjct: 457 FEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 516
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG+ I+++R +E I +IDL + G + AE + + MP + N W ++
Sbjct: 517 QLGKFIHGYIIRNR--VEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMI 573
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ Y +G + E+ I MR GVK
Sbjct: 574 SG----------------------------------YVKVGSYLEALVIFTDMRKAGVKP 599
Query: 312 --------MPGCS---YIEVSKRVHEFV 328
+P CS +E K +H F+
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEIHNFI 627
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 25 LNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAAL 82
+A+ +F+ + ++ W L+A + E + +F R+ +KPD + L
Sbjct: 246 FQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVL 305
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC+ LG V G+ +H ++ + G V + ++ + MYAK A+++F+ M + V
Sbjct: 306 KACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVA 365
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNI 201
+W +I+ G +AL++F M+ + KP+ +T ++S+C + +E G+ + +
Sbjct: 366 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 425
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++S + ++ + ++D+ G+ G L+ A+++ ++ N W S++A ++ GD
Sbjct: 426 VRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIAGYSLKGD 480
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
+A + A SA +L LG+ IH I GL + L +LI++Y A VF+
Sbjct: 200 LARVTAGSALEEL----LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQT 255
Query: 136 MKNKSVIT-WTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIAILSACCHVGLVE 193
++N IT W ++A + + E L++F R + +KP+ T+ ++L AC +G V
Sbjct: 256 IENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVG 315
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ + +++KS + ++ + + + + ++A KL MP E + A W ++++
Sbjct: 316 YGKMVHTHVIKSGFAMD--VVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVIS 372
Query: 253 A 253
Sbjct: 373 C 373
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 211/324 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++ GY K+G ++ AR+LF+ M ++VI++ ++I GY + +A+ LF +M+ +
Sbjct: 307 WNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM 366
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D +++ L+ACA LGA+ G +H IEQ + V L AL+DMY K G++ +A
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATA 426
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M + V TWT MIAGLA +G+G++AL+ F +M+R +P +T+IA+L+AC H L
Sbjct: 427 VFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 486
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GR +FN M+S + + P++E YGCMIDLL R+G L EA L++ MP + NA IWGS+L
Sbjct: 487 LDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSIL 546
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ +++L A +HL+KL P Y L NIY +W ++ ++R +M + GVKK
Sbjct: 547 SACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKK 606
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHP 335
G S I V+ +VH+FVA D SHP
Sbjct: 607 TAGYSSITVAGQVHKFVANDQSHP 630
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 37/295 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T++ G + G L+ AR L E+NV+SWT+LIAGY++ +P +A+ F M + V
Sbjct: 174 WATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGV 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+A++ ALSAC++L ++LG +H + Q + L ALIDMYAK G I +A
Sbjct: 234 APDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQA 293
Query: 132 V--------------------------------FENMKNKSVITWTTMIAGLALHGLGRE 159
V F+ M + VIT+ +MI G G R+
Sbjct: 294 VFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRD 353
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F +M R ++ + T +++L+AC +G + GR ++ R +E + ++
Sbjct: 354 ALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALL 412
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
D+ + G + EA + RM E + W +++A G +G+ AL+ +++
Sbjct: 413 DMYMKCGRVDEATAVFHRMG-ERDVHTWTAMIAGLAFNG---MGKDALESFCQMK 463
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 36/117 (30%)
Query: 106 LNTIVP-----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
L T++P + N LI MYA G A + F+ + K + W T+I GL GL EA
Sbjct: 131 LRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEA 190
Query: 161 LDM------------------FSRMERAR-------------VKPNEITFIAILSAC 186
+ +SR R V P+E+ I LSAC
Sbjct: 191 RRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSAC 247
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 206/313 (65%), Gaps = 6/313 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G K ++++AR LF+ TEK+V++W +I+GY P EA+ +F+ M+
Sbjct: 178 WNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE 237
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKI 126
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 238 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 297
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+A++VF +K++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 298 DRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILAC 356
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +
Sbjct: 357 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV 416
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 417 WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 476
Query: 307 MGVKKMPGCSYIE 319
VKK G S IE
Sbjct: 477 TRVKKPTGVSLIE 489
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 60/307 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ +A GDL A LF+ + + ++W+++ +GYA+ + +EA+ LF M +
Sbjct: 117 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK--- 173
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++A ++ C K ++ A ++
Sbjct: 174 -DQVAWNVMITGC-----------------------------------LKCKEMDSAREL 197
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ K V+TW MI+G G +EAL +F M A P+ +T +++LSAC +G +
Sbjct: 198 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 257
Query: 193 ELGRRYFNIMKSRYGIEPKI----EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+R + + I + +ID+ + G + A ++ R + + + + W
Sbjct: 258 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWN 316
Query: 249 SL---LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL-----GRWNESGKI 300
+L LA + G +E+ E +Q L K+ P+ ++ I IL GR +E K
Sbjct: 317 TLIVGLALHHAEGSIEMFE-EMQRL-KVWPNE------VTFIGVILACSHSGRVDEGRKY 368
Query: 301 RKVMRDM 307
+MRDM
Sbjct: 369 FSLMRDM 375
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L A LF+ + + +V ++ G AQ +P + ++L+ M+ V PD L
Sbjct: 26 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 85
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC++L G H + ++G + NALI +A G +G A ++F++ +
Sbjct: 86 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 145
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W++M +G A G EA+ +F M +++ + +++ C ++ R F+
Sbjct: 146 AWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFD-- 199
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASNIYGD 259
R+ E + + MI GY +EA + + M + SLL+A + GD
Sbjct: 200 --RF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 256
Query: 260 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 295
+E G+ H+ LE ++ S+IY WN
Sbjct: 257 LETGK--RLHIYILE-----TASVSSSIYVGTPIWN 285
>gi|125574942|gb|EAZ16226.1| hypothetical protein OsJ_31678 [Oryza sativa Japonica Group]
Length = 387
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 226/351 (64%), Gaps = 8/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN ++ GYAK DL AR +F M +++V+SW+ +I G + + EA+ +F M+
Sbjct: 26 WNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAVFEMMEATAA 85
Query: 69 --ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ V+ +++ M++ L ACA LG + G +H Y+E++G + L +L+DMYAK G I
Sbjct: 86 RHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLATSLVDMYAKCGAI 145
Query: 127 GKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+AL+VF+ ++N V+ W +I GLA+HG+ RE+L MF +ME A V P+EIT++++LS
Sbjct: 146 VEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVPDEITYLSLLS 205
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ +F ++++ G+ P +E Y C++D+LGRAG L+EA +++ MP + +
Sbjct: 206 ACVHGGLVDEAWSFFRSLEAQ-GLRPHVEHYACLVDVLGRAGRLEEAYGVVKSMPMKPSV 264
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
++ G+LL A +++G VELGE + L+ L+P + G Y LSNIYA+ RW E+ K RKVM
Sbjct: 265 SVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARRWQEAKKARKVM 324
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
+ GVKK+PG S I+V + + F+A D +HP +Y +L I MK +
Sbjct: 325 EERGVKKVPGFSEIDVGRGICRFIAQDKTHPGSAEIYALLKLIAMDMKMKD 375
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 217/350 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V YA+ G A +LFE + K+ I+W +++G+AQ EA+ +F +M V
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++++SA A L ++ G+ IH + + G + + NALI +Y K G I A
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKM 603
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI +L+AC HVGL
Sbjct: 604 QFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 663
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M S +GI P+ + Y C++D+LGRAG L A K + MP ANA +W +LL
Sbjct: 664 VEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLL 723
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A ++L++LEPH+S +Y +LSN YA+ G+W +RK+M+D GV+K
Sbjct: 724 SACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRK 783
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 361
PG S+IEV VH F GD HP ++Y+ L ++ ++ ++Q +
Sbjct: 784 EPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNY 833
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 147/241 (60%), Gaps = 4/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L+ AR + E++ K+V+SWT++IAGY Q + EA+ F+ MQ+ + PD I +
Sbjct: 390 YSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A+SACA + A+ G+ IH+ + G + V + NAL+++YA+ G+ +A +FE +++
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K ITW M++G A GL EAL++F +M +A VK N TF++ +SA ++ ++ G++
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K+ G + E +I L G+ G +++A+ M E N W +++ + + +
Sbjct: 570 HATVIKT--GCTSETEVANALISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQH 626
Query: 258 G 258
G
Sbjct: 627 G 627
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 133/241 (55%), Gaps = 4/241 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A Y + G L+ A +F M + +++ TLI+ +AQ A+ +F M++
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT 241
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L+ACA +G + G+ +H+Y+ + G++ + +L+D+Y K G I +AL++
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++ +V+ W M+ ++ D+F +M A V+PNE T+ +L C + G +
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-WGSLL 251
LG + +++ + G E + G +ID+ + G+L +A ++L + EA + W S++
Sbjct: 362 NLGEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL--EAKDVVSWTSMI 418
Query: 252 A 252
A
Sbjct: 419 A 419
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +FE ++ ++ +SW +++GYA+ EA+ L+ +M V
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LSAC + E G +H + + G + + NALI +Y + G + A +V
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +T+ T+I+ A G G AL++F M + P+ +T ++L+AC +G +
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G++ + + + G+ P G ++DL + G + EA ++ + N +W +L
Sbjct: 261 NKGKQLHSYLL-KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-RTNVVLWNLMLV 318
Query: 253 ASNIYGDV 260
A YG +
Sbjct: 319 A---YGQI 323
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G + A +F+ NV+ W ++ Y Q+ ++ LF +M V+P+E
Sbjct: 289 YVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTY 348
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C G + LGE IH + G + + ++ LIDMY+K G + KA ++ E ++
Sbjct: 349 PCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA 408
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K V++WT+MIAG H +EAL+ F M+ + P+ I + +SAC + + G++
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI 468
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + S Y + I + +++L R G +EA L + + + W +++ +
Sbjct: 469 HSRVYVSGYSADVSI--WNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMVSG---F 522
Query: 258 GDVELGECALQHLIKL 273
L E AL+ IK+
Sbjct: 523 AQSGLYEEALEVFIKM 538
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 215/333 (64%), Gaps = 1/333 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y K G++ +A +F+ M + NV+SW +I+GY ++ EA+ +F M+ VK
Sbjct: 347 SSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVK 406
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + L AC+QL +E G+ IHN+I + L + AL+DMYAK G + +AL +
Sbjct: 407 PDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHI 466
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + ++WT+MIA HG EAL +F +M+++ KP+++TF+AILSAC H GLV
Sbjct: 467 FNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLV 526
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAIWGSLL 251
+ G YFN M + YG +P +E Y C+IDLLGR G L+EA ++L+R P + + +L
Sbjct: 527 DEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLF 586
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A +++ ++LGE + LI+ +P + Y ILSN+YA + +W+E K+R ++++G+KK
Sbjct: 587 SACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKK 646
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCS+IEV KR+H FV D SHP D +Y+ +
Sbjct: 647 NPGCSWIEVGKRIHPFVVEDKSHPQADMIYECM 679
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 143/250 (57%), Gaps = 10/250 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G L A+ +FE + KNV+SW ++IAGY+ I LFRRM E ++
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + L AC++ ++LG++IH YI + + + +N++LID+Y K G IG A V
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+NM +V++W MI+G G EAL +F+ M +A VKP+ ITF ++L AC + ++
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425
Query: 193 ELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+ N + IE K+E G ++D+ + G + EA + ++P E + W
Sbjct: 426 EKGKEIHNFI-----IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWT 479
Query: 249 SLLAASNIYG 258
S++AA +G
Sbjct: 480 SMIAAYGSHG 489
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 159/328 (48%), Gaps = 49/328 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ V YAK +A LF+ M E++V SW +I+ Y Q QP +A+ LF M+V K
Sbjct: 145 SSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFK 204
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + +S+CA+L +E G+ IH + + G +++AL+DMY K G + A +V
Sbjct: 205 PDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEV 264
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ K+V++W +MIAG +L G + +++F RM+ ++P T +IL AC +
Sbjct: 265 FEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 324
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG+ I+++R +E I +IDL + G + AE + + MP + N W ++
Sbjct: 325 QLGKFIHGYIIRNR--VEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMI 381
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ Y +G + E+ I MR GVK
Sbjct: 382 SG----------------------------------YVKVGSYLEALVIFTDMRKAGVKP 407
Query: 312 --------MPGCS---YIEVSKRVHEFV 328
+P CS +E K +H F+
Sbjct: 408 DAITFTSVLPACSQLAVLEKGKEIHNFI 435
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 25 LNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAAL 82
+A+ +F+ + ++ W L+A + E + +F R+ +KPD + L
Sbjct: 54 FQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVL 113
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC+ LG V G+ +H ++ + G V + ++ + MYAK A+++F+ M + V
Sbjct: 114 KACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVA 173
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNI 201
+W +I+ G +AL++F M+ + KP+ +T ++S+C + +E G+ + +
Sbjct: 174 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 233
Query: 202 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
++S + ++ + ++D+ G+ G L+ A+++ ++ N W S++A ++ GD
Sbjct: 234 VRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIAGYSLKGD 288
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D +L+ L C ++ G+ IH I GL + L +LI++Y A VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 134 ENMKNKSVIT-WTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIAILSACCHVGL 191
+ ++N IT W ++A + + E L++F R + +KP+ T+ ++L AC +G
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G+ + +++KS + ++ + + + + ++A KL MP E + A W ++
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSA--VGMYAKCNVFEDAIKLFDEMP-ERDVASWNNV 178
Query: 251 LAA 253
++
Sbjct: 179 ISC 181
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 207/346 (59%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE+M EK++ SW ++++ + Q + + L RM ++
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQ 335
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI------VPLNNALIDMYAKSGKI 126
PD + + L AC+ L A+ G IH Y+ GL V L NA+IDMYAK G +
Sbjct: 336 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 395
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC
Sbjct: 396 RDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L MP EAN +
Sbjct: 456 SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 515
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+ E ++R MR
Sbjct: 516 WRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQ 575
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
V+K PGCS+IE+ VH FV+ D +HP+ +Y L + +++
Sbjct: 576 QNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLR 621
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 7 LLYKFW--------NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
LL+KF + +V Y K G + +A+ FE + ++V+ W ++ GYAQ+ Q
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
+ FRRM E+V P + LS A +G + G IH + + G ++ V ++N+LID
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MY K I AL++FE M+ K + +W ++++ G L + RM A ++P+ +T
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEK 233
+L AC H+ + GR M S G + K + +ID+ + G +++A
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
+ RM + A W ++ ++G
Sbjct: 401 VFERMS-NKDVASWNIMIMGYGMHG 424
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 6/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+++ Y+K +N A ++F T E NV ++ +I+G+ P E +++M+ E V
Sbjct: 76 TSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGV 135
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ A+ AC L +E+ + IH + ++GL V + +AL++ Y K G + A
Sbjct: 136 IPDKFTFPCAIKAC--LDVLEIKK-IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV 192
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
FE + + V+ W M+ G A G L+ F RM V P+ T +LS +G
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G R + + G + + +ID+ G+ +++A ++ M E + W S++
Sbjct: 253 LNNG-RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIV 310
Query: 252 AASNIYGD 259
+ GD
Sbjct: 311 SVHEQCGD 318
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 215/339 (63%), Gaps = 2/339 (0%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
YAK ++ AR +F+ M +KN+ +W+ +I GY+++ NEA+ LFR MQ +V PDE+
Sbjct: 176 YAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVT 235
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
M++ +SACA+ GA++LG W+H +I++ G+ + L+ ALIDMYAK G I +A VF+ M
Sbjct: 236 MVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMA 295
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ W+ MI GLA+HGL AL +FSRM +V+PN +TFI +LSAC H GLV GRR
Sbjct: 296 ERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRR 355
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
Y++ M+ GI+P +E YGCM+DL R+ L EA + M N+ IW +LL AS
Sbjct: 356 YWSTMQE-LGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNS 414
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++ + A + L++LEP N NY +LSN+YA +W+ +RK M++ V + GCS
Sbjct: 415 NRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSS 474
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
IE++ +H+FV D SHP+ + +L +I ++ A H
Sbjct: 475 IEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGH 513
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 10/290 (3%)
Query: 28 ARALFELMTEKNVISWTTLI---AGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALS 83
AR LF+ + E + +LI + A + + ++RRM + + P+ + AL
Sbjct: 80 ARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 139
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVI 142
AC+ + A+ G +H+ + GL + L+++YAK ++ A VF+ M +K++
Sbjct: 140 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 199
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W+ MI G + G+ EAL +F M+ A V P+E+T ++++SAC G ++LG R+ +
Sbjct: 200 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLG-RWVHAF 258
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 262
R GI +E +ID+ + G ++ A+ + M E + W +++ I+G VE+
Sbjct: 259 IDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMA-ERDTKAWSAMIVGLAIHGLVEV 317
Query: 263 GECALQHL--IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ +K+ P+N +LS A G NE + M+++G+K
Sbjct: 318 ALKLFSRMLELKVRPNNVTFIGVLSAC-AHSGLVNEGRRYWSTMQELGIK 366
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 212/324 (65%), Gaps = 2/324 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVEN 70
+N ++ G+ KVGD + AR LF+ M ++ +SW TL+AGYAQ D +AI LF RM +
Sbjct: 198 YNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLIST 257
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD IA+++ALSACAQLG +E G+ IH YI+Q + L+ L+D+YAK G I A
Sbjct: 258 VRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAR 317
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++FE+ +K++ TW ++ GL +HG G +L FSRM A +KP+ ++F+ IL C H G
Sbjct: 318 EIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAG 377
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV R +F M+ Y + +++ YGCM DLLGRAG ++EA +++ RMP + +WG +
Sbjct: 378 LVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGV 437
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L I+G+VE+ E A ++++ L P + G Y+I+++IYA GRW + +IR++M VK
Sbjct: 438 LGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVK 497
Query: 311 KMPGCSYIEVSKRV-HEFVAGDTS 333
K PGCS ++++ V H FVAG S
Sbjct: 498 KNPGCSLVQLNNGVFHGFVAGSAS 521
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 36/264 (13%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A ++F + + + T+I + + P A+ +F RM+ +V PD L AC+
Sbjct: 82 ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSL 141
Query: 88 LGAVELGEWIHNYIEQYGL-------NTIVPL------------------------NNAL 116
L A+ L + +H+ ++G NT++ + NAL
Sbjct: 142 LPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNAL 201
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-LGREALDMFSRMERARVKPN 175
I + K G +A ++F+ M + ++W T++AG A G L +A+ +F+RM + V+P+
Sbjct: 202 IGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPD 261
Query: 176 EITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
I ++ LSAC +G +E G+ + I ++R I + ++DL + G ++ A ++
Sbjct: 262 NIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLST--GLVDLYAKCGCIETAREI 319
Query: 235 LRRMPFEANAAIWGSLLAASNIYG 258
P + N W +LL ++G
Sbjct: 320 FESSP-DKNLFTWNALLVGLGMHG 342
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 77/214 (35%), Gaps = 33/214 (15%)
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
++P NA + G AL VF + N S + TMI L AL +F
Sbjct: 61 FTALLPTTNA--SPTTPAALTGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFV 118
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYF---------------NIMKSRYGIEP 210
RM R V P+ TF L AC + + L + N + Y +
Sbjct: 119 RMRRLSVPPDTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNK 178
Query: 211 KIEQ---------------YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ Y +I + G A +L +MP +A WG+LLA
Sbjct: 179 HLHHACQVFNETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIR-DAVSWGTLLAGYA 237
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 289
GD+ + L + + + N A++S + A
Sbjct: 238 QSGDLCMDAIQLFNRMLISTVRPDNIALVSALSA 271
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 215/344 (62%), Gaps = 4/344 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT ++ Y+K D +AR LF++MT + +SWT +I+GYA+ +EA+ LF M K
Sbjct: 901 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 960
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 131
PD + +L+ +S C + G++E G+WI + YG V + NALIDMY+K G I +A
Sbjct: 961 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 1020
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+N K+V+TWTTMIAG AL+G+ EAL +FS+M KPN ITF+A+L AC H G
Sbjct: 1021 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 1080
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G YF+IMK Y I P ++ Y CM+DLLGR G L+EA +L+R M + +A IWG+LL
Sbjct: 1081 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 1140
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +V++ E A + L LEP + Y ++NIYA G W+ +IR +M+ +KK
Sbjct: 1141 NACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK 1200
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S I+V+ + H F G+ H + + +Y L NG FA+
Sbjct: 1201 YPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL---NGLSLFAK 1241
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 23/258 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT ++ Y K GDL++A+ +FE + ++ V+SW ++ Y+ + +A L+ M E
Sbjct: 798 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 857
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD + ++C + G IH++ G + + N I MY+KS A
Sbjct: 858 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 917
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M +++ ++WT MI+G A G EAL +F M ++ KP+ +T ++++S C G
Sbjct: 918 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 977
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGC----------MIDLLGRAGYLQEAEKLLRRMPF 240
+E G+ I+ + + YGC +ID+ + G + EA + P
Sbjct: 978 SLETGK----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP- 1026
Query: 241 EANAAIWGSLLAASNIYG 258
E W +++A + G
Sbjct: 1027 EKTVVTWTTMIAGYALNG 1044
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 11 FWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
FW+ + G + K ++ A +FE M E++ +W +++G+ Q ++A +LFR
Sbjct: 689 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFR 748
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M++ + PD + ++ + + + +++L E +H + G++ V + N I Y K G
Sbjct: 749 EMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCG 808
Query: 125 KIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
+ A VFE + +++V++W +M ++ G +A ++ M R KP+ TFI +
Sbjct: 809 DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINL 868
Query: 183 LSACCHVGLVELGR 196
++C + + GR
Sbjct: 869 AASCQNPETLTQGR 882
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 12/238 (5%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 88
R L+ + +V +W I + P E++ LFR M+ +P+ ACA+L
Sbjct: 612 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 671
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
V E +H ++ + + V + A +DM+ K + A +VFE M + TW M+
Sbjct: 672 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 731
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 208
+G G +A +F M + P+ +T + ++ + ++L + + R G+
Sbjct: 732 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMHAVGIRLGV 790
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA------NAAIWGSLLAASNIYGDV 260
+ ++ I G+ G L A ++ FEA W S+ A +++G+
Sbjct: 791 DVQVTVANTWISTYGKCGDLDSA-----KLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 843
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 206/313 (65%), Gaps = 6/313 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G K ++++AR LF+ TEK+V++W +I+GY P EA+ +F+ M+
Sbjct: 212 WNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE 271
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKI 126
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 272 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 331
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+A++VF +K++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 332 DRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILAC 390
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +
Sbjct: 391 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV 450
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 451 WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Query: 307 MGVKKMPGCSYIE 319
VKK G S IE
Sbjct: 511 TRVKKPTGVSLIE 523
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 60/307 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ +A GDL A LF+ + + ++W+++ +GYA+ + +EA+ LF M +
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK--- 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++A ++ C K ++ A ++
Sbjct: 208 -DQVAWNVMITGC-----------------------------------LKCKEMDSAREL 231
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ K V+TW MI+G G +EAL +F M A P+ +T +++LSAC +G +
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 193 ELGRRYFNIMKSRYGIEPKI----EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+R + + I + +ID+ + G + A ++ R + + + + W
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWN 350
Query: 249 SL---LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL-----GRWNESGKI 300
+L LA + G +E+ E +Q L K+ P+ ++ I IL GR +E K
Sbjct: 351 TLIVGLALHHAEGSIEMFE-EMQRL-KVWPNE------VTFIGVILACSHSGRVDEGRKY 402
Query: 301 RKVMRDM 307
+MRDM
Sbjct: 403 FSLMRDM 409
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L A LF+ + + +V ++ G AQ +P + ++L+ M+ V PD L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
AC++L G H + ++G + NALI +A G +G A ++F++ +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
W++M +G A G EA+ +F M +++ + +++ C ++ R F+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFD-- 233
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASNIYGD 259
R+ E + + MI GY +EA + + M + SLL+A + GD
Sbjct: 234 --RF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 260 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 295
+E G+ H+ LE ++ S+IY WN
Sbjct: 291 LETGK--RLHIYILE-----TASVSSSIYVGTPIWN 319
>gi|359475492|ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 226/366 (61%), Gaps = 10/366 (2%)
Query: 13 NTMVAG-YAKVGDLNNARALFELMT---EKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
NT++A Y K G + + F+ + +++V+ W +I+ Y Q EA++LFR M
Sbjct: 85 NTVLAYLYGKWGKVEKCKERFDEIVGIGKRSVLPWNVIISAYVQNGCSFEALSLFRVMIE 144
Query: 69 E-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKS 123
+ N++P+ + M++ LSACAQ+G ++LG+WIH Y++ G IV N ALIDMY+K
Sbjct: 145 DLNLRPNHVTMVSVLSACAQVGDLDLGKWIHGYVKSEGCKAIVESNTFLATALIDMYSKC 204
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G +GKA VFE M +K V+++ MI GLA++G G EAL +FS+M+ ++PN TF+ +L
Sbjct: 205 GNLGKAKDVFEQMVSKDVVSFNAMIMGLAINGEGEEALRLFSKMQELSLRPNSGTFLGVL 264
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC H GL++ GR+ F M + + P++E Y C +DLL R G L+EA +++ MPF N
Sbjct: 265 CACSHSGLLDTGRQMFLDMIPHFSVPPELEHYACYVDLLARVGLLEEAFEVVASMPFVPN 324
Query: 244 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
+WG+LL ++ +EL + Q L+K++P NS Y + SN A +W E +R +
Sbjct: 325 NFVWGALLQGCRLHSRLELAQDVSQKLVKVDPENSAGYVMFSNALASDQQWGEVSGLRWL 384
Query: 304 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK-FAEHLQNEFS 362
MR+ GV+K PGCS+I V++ VHEF+AG SHP D +Y L + +MK FA + +
Sbjct: 385 MREKGVRKHPGCSWISVNRVVHEFLAGSLSHPQIDSIYHTLNGLVKEMKVFASYHNTQLD 444
Query: 363 GVLESD 368
+L ++
Sbjct: 445 ALLHTE 450
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 26/261 (9%)
Query: 40 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 99
V WT+LIAG AQ Q E + LF M EN++P+ +++ LSAC++L AVE+ +W+
Sbjct: 7 VRCWTSLIAGSAQSGQTEEVLRLFFMMVKENLRPENDTIVSVLSACSKLEAVEIEKWVMI 66
Query: 100 YIE--------QYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN---MKNKSVITWTTMI 148
E +G +++ N L +Y K GK+ K + F+ + +SV+ W +I
Sbjct: 67 LSEFINDDDTGSFGRDSV---NTVLAYLYGKWGKVEKCKERFDEIVGIGKRSVLPWNVII 123
Query: 149 AGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS--- 204
+ +G EAL +F M E ++PN +T +++LSAC VG ++LG+ +KS
Sbjct: 124 SAYVQNGCSFEALSLFRVMIEDLNLRPNHVTMVSVLSACAQVGDLDLGKWIHGYVKSEGC 183
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
+ +E +ID+ + G L +A+ + +M + + +++ I G+ GE
Sbjct: 184 KAIVESNTFLATALIDMYSKCGNLGKAKDVFEQM-VSKDVVSFNAMIMGLAINGE---GE 239
Query: 265 CALQHLIKLEP----HNSGNY 281
AL+ K++ NSG +
Sbjct: 240 EALRLFSKMQELSLRPNSGTF 260
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 206/309 (66%), Gaps = 2/309 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G + +A +F+LM +NV+SWT+LI GY+ + PNEA+ F++M+ EN++
Sbjct: 219 NALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCPNEALGFFKQMEAENIR 278
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
PDEI +L + C++L + ELGEWI Y+ + GL P + NAL+DM+AK G I +A Q
Sbjct: 279 PDEITVLGVVCMCSKLRSFELGEWISQYVVKIGLLKESPAIANALMDMHAKCGNINRACQ 338
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M+ K++++WT MI GLA+HG G AL F +M+R KP+ + F+++LSAC H GL
Sbjct: 339 IFDGMEEKTIVSWTIMIQGLAMHGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGL 398
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F+ M++ Y I P +E YGCM+D+L RAG + EA K ++ MP + + +W +LL
Sbjct: 399 VDEGWRCFSSMEADYHISPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLL 458
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + G++ L + +L +L P S +Y +LSN++A W+ G++RK M D GV K
Sbjct: 459 GACHTQGNISLANQVMNYLCELGPKKSEDYVLLSNLFASNAEWDNVGEVRKEMGDRGVTK 518
Query: 312 M-PGCSYIE 319
PGCS+IE
Sbjct: 519 QDPGCSFIE 527
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 99/167 (59%)
Query: 29 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 88
+ +F+ M +++++ W LIA YA + P + + M NVKP+ + ++ LS C+ L
Sbjct: 134 QQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILSVCSSL 193
Query: 89 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 148
A+ G+ +H Y+ + + V ++NALI +Y+K G I A+QVF+ M ++V++WT++I
Sbjct: 194 RALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLI 253
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
G + + EAL F +ME ++P+EIT + ++ C + ELG
Sbjct: 254 NGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELG 300
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
S+L+ F + + G V AR + + + + +W T+I GY + + P EAI ++
Sbjct: 14 SKLVVSFASITLPGTTSV-----ARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILVYN 68
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
++ + +K D ++ + AC + GE IH I + G V + AL+++Y
Sbjct: 69 HVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLNLYGLFD 128
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ Q+F+ M + ++ W +IA A + ++ M R+ VKPN +T ++ILS
Sbjct: 129 EDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILS 188
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C + + G+ + ++ IE + + +I + + G +++A ++ + MP N
Sbjct: 189 VCSSLRALREGKAVHGYV-TKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMR-NV 246
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHN 277
W SL+ N Y D AL ++E N
Sbjct: 247 VSWTSLI---NGYSDNNCPNEALGFFKQMEAEN 276
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 238/355 (67%), Gaps = 3/355 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G + AR +F+ + E++V+S T +I+GYAQ+ EA+ LFRR+Q E ++
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + + L+A + L A++ G +H+++ + L V L N+LIDMY+K G + + ++
Sbjct: 210 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F++M ++VI+W M+ G + HGLGREA+++F M E +VKP+ +TF+A+LS C H G+
Sbjct: 270 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 329
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ G ++ ++ + G EP+IE YGC++DL GRAG ++EA + +++MPFE AAIWGSL
Sbjct: 330 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 389
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ +V +GE + L+++E N+GNY ILSN+YA GRW++ +R++M++ V
Sbjct: 390 LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 449
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
K PG S+IE+ + +H F A D SHP + ++ + +++ ++K A ++ E S VL
Sbjct: 450 KEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVP-ELSCVL 503
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 140/245 (57%), Gaps = 4/245 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y K L +AR + + M E+NV+SWT +I+GY+Q +EA+ LF M + P+
Sbjct: 51 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 110
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E L++C +LG IH+ + + + + + ++L+DMYAK+GKI +A +VF+
Sbjct: 111 EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFD 170
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + V++ T +I+G A GL EALD+F R++R ++ N +T+ ++L+A + ++
Sbjct: 171 GLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDH 230
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR+ + ++++++ ++ +ID+ + G L + ++ MP E W ++L
Sbjct: 231 GRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVG 287
Query: 254 SNIYG 258
+ +G
Sbjct: 288 YSKHG 292
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L+ C A+ G+ +H ++ + V L LI +Y K +G A +V + M +
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V++WT MI+G + G EAL +F M + PNE TF +L++C +LGR+
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+++ + E I ++D+ +AG + EA ++ +P E + ++++ Y
Sbjct: 135 SLV-IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP-ERDVVSCTAIISG---YAQ 189
Query: 260 VELGECALQHLIKLEPHN-SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ L E AL +L+ NY +++ L R+V + K+P
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 244
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 212/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YAK G ++NA + M K+ +S++ +I+G Q +A+ +FR+MQ +
Sbjct: 351 NSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA 410
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P M+A L AC+ L A++ G H Y G + NA+IDMY+K GKI + ++
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREI 470
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+N+ +I+W TMI G +HGL EAL +F ++ +KP+++T IA+LSAC H GLV
Sbjct: 471 FDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLV 530
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ +F+ M + I+P++ Y CM+DLL RAG L EA ++RMPF N IWG+LLA
Sbjct: 531 TEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLA 590
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + ++E+GE + + L P +GN+ ++SNIY+ +GRW+++ IR + R G KK
Sbjct: 591 ACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKS 650
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS++E+S +H F+ G SHP + + L ++ QMK
Sbjct: 651 PGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMK 690
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 5/270 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIA 77
YAK L AR +F + +KN + W+ +I GY D ++A+ L+ M + + P
Sbjct: 255 YAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPAT 314
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L ACAQL ++ G+ +H ++ + G++ + N+LI MYAK G + A+ + M
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMI 374
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
K ++++ +I+G +G +AL +F +M+ + + P T IA+L AC H+ ++ G
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTC 434
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
R G +ID+ + G + + ++ RM + W +++ I+
Sbjct: 435 CHGYTVVR-GFTNDTSICNAIIDMYSKCGKITISREIFDRMQ-NRDIISWNTMIIGYGIH 492
Query: 258 GDVELGECALQHL--IKLEPHNSGNYAILS 285
G Q L + L+P + A+LS
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLS 522
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
AR +F+ + + +V+ W +I YA ++I L+ M V P L AC+
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWT 145
L A++LG IH + GL+ + ++ AL+ MYAK G + +A +F ++ +++ ++ W
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
MIA + H L + + ++M++A V PN T ++IL + G+
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ + + Q ++D+ + L A K+ + + N W +++ ++ +
Sbjct: 240 FFFDNVVLQTA-LLDMYAKCHLLFYARKIFNTVN-KKNDVCWSAMIGGYVLHDSIS 293
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 19 YAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
YAK G L A+ LF ++ ++++++W +IA ++ + I +MQ V P+
Sbjct: 152 YAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSS 211
Query: 77 AMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
+++ L Q A+ G+ IH Y I + + +V L AL+DMYAK + A ++F
Sbjct: 212 TLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVV-LQTALLDMYAKCHLLFYARKIFNT 270
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVEL 194
+ K+ + W+ MI G LH +AL ++ M + P T +L AC + ++
Sbjct: 271 VNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKR 330
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
G++ + +++KS G++ +I + + G + A L M
Sbjct: 331 GKKLHCHMIKS--GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 208/340 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK G + +AR +F+ M ++V+SW+ +I Y + EA F M+ N++
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+AC LGA+++G I+ + L + VPL NALI M AK G + +A +
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYI 518
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + VITW MI G +LHG REAL +F RM + R +PN +TF+ +LSAC G V
Sbjct: 519 FDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFV 578
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ GRR+F + GI P ++ YGCM+DLLGRAG L EAE L++ MP + ++IW SLL
Sbjct: 579 DEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLV 638
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+G++++ E A + + ++P++ Y LS++YA G W K+RKVM G++K
Sbjct: 639 ACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKE 698
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GC++IEV+ +VH FV D SHP +Y L ++ +K
Sbjct: 699 QGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIK 738
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 41/350 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y G + AR +F+ M ++V+SWT +I GYA+ +A LF MQ E ++
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + ++ACA + IH+ ++ G T + ++ AL+ MYAK G I A QV
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + V++W+ MI +G G EA + F M+R+ ++P+ +T+I +L+AC H+G +
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 193 ELGRRYFN------------------IMKSRYG------------IEPKIEQYGCMIDLL 222
++G + IM +++G + + + MI
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGY 537
Query: 223 GRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIK---LEPH 276
G +EA L RM F N+ + +L+A + G V+ G +L++ + P
Sbjct: 538 SLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVP- 596
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC-SYIEVSKRVH 325
+ + +LGR E + +++ M VK S + V+ R+H
Sbjct: 597 ---TVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 100/174 (57%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y+ G++ AR +F+ + K V++W LIAGYAQ+ EA LFR+M E ++
Sbjct: 96 NTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLE 155
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P I L+ L AC+ + G+ +H + G + + AL+ MY K G + A QV
Sbjct: 156 PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQV 215
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
F+ + + V T+ M+ G A G +A ++F RM++ +KPN+I+F++IL C
Sbjct: 216 FDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 138/270 (51%), Gaps = 6/270 (2%)
Query: 9 YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
++ +V+ Y K G +++AR +F+ + ++V ++ ++ GYA+ +A LF RMQ
Sbjct: 193 FRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQ 252
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+KP++I+ L+ L C A+ G+ +H GL + + +LI MY G I
Sbjct: 253 VGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEG 312
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A +VF+NMK + V++WT MI G A +G +A +F+ M+ ++P+ IT++ I++AC
Sbjct: 313 ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372
Query: 189 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ R + + + +G + + ++ + + G +++A ++ MP + W
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVST--ALVHMYAKCGAIKDARQVFDAMP-RRDVVSW 429
Query: 248 GSLLAA--SNIYGDVELGECALQHLIKLEP 275
+++ A N YG L +EP
Sbjct: 430 SAMIGAYVENGYGTEAFETFHLMKRSNIEP 459
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C +L LG+ + ++I Q G + N LI +Y+ G + +A Q+F++++NK+V+TW
Sbjct: 67 CTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTW 126
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+IAG A G +EA +F +M ++P+ ITF+++L AC
Sbjct: 127 NALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDAC 168
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 211/338 (62%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
A Y K+ +++ AR LF+ EK V++W +I+GY Q AI+LF+ M P+
Sbjct: 351 FTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPN 410
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ + LSACAQLG++ G+W+H+ I+ L + ++ AL+DMYAK G I +A Q+F+
Sbjct: 411 AVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFD 470
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+M K+ +TW TMI G LHG G EAL +++ M P+ +TF+++L AC H GLV
Sbjct: 471 SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGE 530
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G F+ M ++Y IEP IE Y CM+D+LGR+G L++A + +++MP E A+WG+LL A
Sbjct: 531 GEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGAC 590
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+ D ++ A + L +L+P + G Y +LSNIY++ + ++ IR+V++ + K PG
Sbjct: 591 MIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPG 650
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
C+ IEV+ H FV+GD SH +Y L K+ G+M+
Sbjct: 651 CTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMR 688
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ Y+K GD+N AR LF + ++I++ +I+G+ ++ LFR + +
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVS 309
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ + + G + L IH + + G+ ++ A +Y K +I A +F+
Sbjct: 310 SSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFD 369
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
K+V+ W MI+G +G A+ +F M + PN +T ILSAC +G +
Sbjct: 370 ESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSF 429
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ +++KS +EP I ++D+ + G + EA +L M E N W +++
Sbjct: 430 GKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGY 487
Query: 255 NIYG 258
++G
Sbjct: 488 GLHG 491
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 27 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSAC 85
+ARALF + + ++ + L+ G++ D P+ +I+L+ ++ N+ PD A++AC
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+ + L H+ I+ YG N V +AL+D+Y K ++ A +VF+ M + + W
Sbjct: 122 SNDKHLMLLH-AHSIIDGYGSNVFV--GSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKS 204
TMI GL + +++ +F M V+ + T A+L A + +++G + +K
Sbjct: 179 TMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKI 238
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+G + +I L + G + A L RR+
Sbjct: 239 GFGFCDYV--LTGLISLYSKCGDVNTARLLFRRI 270
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 48/335 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K + AR +F+ M E++ + W T+I G + +++I LFR M + V+
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + A L A A+L +++G I + G + LI +Y+K G + A +
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEIT-FIAILSACCHV 189
F + +I + MI+G +G ++ +F + RV + I I + S H+
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326
Query: 190 GL--------------------------------VELGRRYFNIMKSRYGIEPKIEQYGC 217
L ++L R F+ E + +
Sbjct: 327 HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFD-----ESPEKTVVAWNA 381
Query: 218 MIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIK-- 272
MI + G + A L + M F NA ++L+A G + G+ + HLIK
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK-WVHHLIKSE 440
Query: 273 -LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
LEP+ + A++ ++YA G +E+ ++ M +
Sbjct: 441 NLEPNIYVSTALV-DMYAKCGNISEAWQLFDSMSE 474
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 219/331 (66%), Gaps = 8/331 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W ++V+ YA G++ AR LF+ M E++V+SWT +I+GY EA+ LF ++ +
Sbjct: 253 WTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGM 312
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIE----QYGLNTIVPLNNALIDMYAKSGKIG 127
+PDE+ ++AALSACA+LGA+ELG IH+ + Q G N A++DMYAK G I
Sbjct: 313 EPDEVVVVAALSACARLGALELGRRIHHKYDRDSWQCGHNR--GFTCAVVDMYAKCGSIE 370
Query: 128 KALQVFENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
AL VF + K+ + ++++GLA HG G A+ +F M ++P+E+T++A+L A
Sbjct: 371 AALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCA 430
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H GLV+ G+R F M S YG+ P++E YGCM+DLLGRAG+L EA L++ MPF+ANA
Sbjct: 431 CGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAV 490
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
IW +LL+A + GDVEL A Q L+ +E + Y +LSN+ ++ + +E+ +R+ +
Sbjct: 491 IWRALLSACKVDGDVELARLASQELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAID 550
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 336
++G++K PG S++E++ +H+F+AGD SHP+
Sbjct: 551 NVGIQKPPGWSHVEMNGTLHKFLAGDKSHPE 581
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAAL 82
L+++ LF + ++ + +I ++ P+ A++L+++M + + PD L
Sbjct: 28 LHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTFPFLL 87
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
+CA+L LG +H ++ + G + V + NAL+ +Y G A +VF+ + +
Sbjct: 88 KSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSV 147
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
++ T+I GL G ++ +F+ M V+P+E TF+A+LSAC + +GR ++
Sbjct: 148 SYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLV 207
Query: 203 KSRYGIEPKIE-QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ G + E ++D+ + G L+ AE+++R ++ A W SL++A + G+VE
Sbjct: 208 YRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVE 267
Query: 262 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG--------VKKMP 313
+ A + ++ + ++ + + Y G + E+ ++ + D+G V +
Sbjct: 268 V---ARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALS 324
Query: 314 GCSY---IEVSKRVHE 326
C+ +E+ +R+H
Sbjct: 325 ACARLGALELGRRIHH 340
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 38/221 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y GD NA +F+ ++ +S+ T+I G + + ++ +F M+ V+
Sbjct: 119 NALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVE 178
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKS----- 123
PDE +A LSAC+ L +G +H + + +G N + L NAL+DMYAK
Sbjct: 179 PDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENEL--LVNALVDMYAKCGCLEV 236
Query: 124 ---------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
G++ A ++F+ M + V++WT MI+G G
Sbjct: 237 AERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGC 296
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+EAL++F +E ++P+E+ +A LSAC +G +ELGRR
Sbjct: 297 FQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRR 337
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 224/341 (65%), Gaps = 7/341 (2%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++++ Y G+ ++AR LF+ M EK+ +SW +I+GY+Q P +A+ LFR++ + +P
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+IA+++ L AC+Q A+ LG+ H Y + L V + + IDMYAKSG I ++ VF
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVF 496
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ +KNK + +W +IA +HG G E++++F RM + P+ TFI IL+ C H GLVE
Sbjct: 497 DGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVE 556
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G +YFN M++ +GIEPK+E Y C++D+LGRAG L +A +L+ MP + ++ +W SLL+
Sbjct: 557 EGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSF 616
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+G++E+G+ + L++LEP N NY LSN+YA GRW++ ++R++++D+G++K
Sbjct: 617 CRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDA 676
Query: 314 GCSYIEVSKRVHEFVAGDTSHPD-------FDRLYQILCKI 347
GCS+IE+ +VH FVAGD P + +L + +CKI
Sbjct: 677 GCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKI 717
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 127/250 (50%), Gaps = 4/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N VA YAK G L A +F M K V SW LI G AQ P +A+ L+ +M +
Sbjct: 275 NGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLV 334
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L A A L ++ G+ +H ++ ++GL + +L+ +Y G+ A +
Sbjct: 335 PDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLL 394
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ KS ++W MI+G + +GL +AL +F ++ +P++I +++L AC +
Sbjct: 395 FDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSAL 454
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGC-MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG+ +E C ID+ ++G ++E+ + + + A W +++
Sbjct: 455 RLGKETHCYALKALLMEDVF--VACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAII 511
Query: 252 AASNIYGDVE 261
AA ++GD E
Sbjct: 512 AAYGVHGDGE 521
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--EN 70
N ++A Y K G ++ A +F M +N++SW ++I+G+++ + + M E
Sbjct: 70 NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PD ++ L CA+ V++G IH + GL+ V +NN+L+DMY+K G + +A
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHV 189
+F+ K+ ++W TMI GL G EA ++F M+ + ++ NE+T + IL AC +
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 2/198 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-ENV 71
N++V Y+K G L A+ LF+ KN +SW T+I G EA LFR MQ+ E++
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDI 232
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ +E+ +L L AC ++ + + +H Y ++G + N + YAK G + A +
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAER 292
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +M+ K+V +W +I G A +G R+AL+++ +M + + P+ T ++L A H+
Sbjct: 293 VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKS 352
Query: 192 VELGRRYFNIMKSRYGIE 209
+ G+ + R+G+E
Sbjct: 353 LRYGKEVHGFVL-RHGLE 369
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 57 NEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 115
++AI +F ++ + D + AC LGE IH + + GL V + NA
Sbjct: 12 SDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VK 173
LI MY K G + A++VF M +++++W ++I+G + +G ++ DM M +
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+ T + +L C V++G R + + G+ + ++D+ + GYL EA+
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHG-LAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM 190
Query: 234 LLRRMPFEANAAIWGSLLAA 253
L + NA W +++
Sbjct: 191 LFDKNN-RKNAVSWNTMIGG 209
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 220/332 (66%), Gaps = 1/332 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G +++A +FE + EK++++W ++I G++Q EAITLF +M + VK
Sbjct: 442 NALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK 501
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++ L+ + AC+ LG +E G+W+H+ + YGL L+ AL DMY+K G++ A V
Sbjct: 502 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 561
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +S+++W+ MIAG +HG + +F++M + +KPN+ITF+ ILSAC H G V
Sbjct: 562 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAV 621
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ YFN M S +G+EPK + + CM+DLL RAG L A +++ +PF AN++IWG+LL
Sbjct: 622 EEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLN 680
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ +++ + ++L+ ++ ++G Y +LSNIYA G W++ GK+R +M+ G++K+
Sbjct: 681 GCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKV 740
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IE+ K+++ F GDTSH +Y+ L
Sbjct: 741 PGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFL 772
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 141/245 (57%), Gaps = 9/245 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA G+L + +FE + EK ++SW TLI+ + + QP EA+ LF +MQ + + PD ++
Sbjct: 348 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 407
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
++LSAC + +LG IH YI + G N V NALIDMYAK G + A ++FE +K
Sbjct: 408 ASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV--QNALIDMYAKCGFVHSANKMFEKIK 465
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
KS++TW +MI G + +G EA+ +F +M VK +++TF++++ AC H+G +E G+
Sbjct: 466 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 525
Query: 198 YFN--IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ IM YG+ + D+ + G LQ A + RM E + W ++A
Sbjct: 526 VHHKLIM---YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYG 581
Query: 256 IYGDV 260
++G +
Sbjct: 582 MHGQI 586
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y ++ L++A F+ M ++V++W++++ + Q Q +E + +F +M E V+
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ML+ AC++LG++ LG +H Y+ + + + LNN+LI MY K G + A ++
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FEN+ + WT MI+ G +EAL++F++M+ +++PN++T + +L AC +G V
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ GR + R ++P+++ G +++L G L++ K+ + E W +L+
Sbjct: 319 KEGRSVHGFVIRR-AMDPELDFLGPALMELYADTGNLRDCHKVFETIK-EKTILSWNTLI 376
Query: 252 A 252
+
Sbjct: 377 S 377
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 131/242 (54%), Gaps = 4/242 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K+GDL +A LFE + + WT +I+ Y Q EA+ +F +MQ ++
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKME 299
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
P+++ M+ L ACA+LG V+ G +H ++ + ++ + L AL+++YA +G + +
Sbjct: 300 PNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 359
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE +K K++++W T+I+ +G EAL +F +M+ + P+ + + LSAC +
Sbjct: 360 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 419
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG + + ++ +ID+ + G++ A K+ ++ E + W S++
Sbjct: 420 SQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMI 476
Query: 252 AA 253
Sbjct: 477 CG 478
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKP 73
++ YA++G +++ +F+ + + W LI Y EA++L+ M ++ +
Sbjct: 39 LIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQI 98
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L AC+ G + +G +H + + G + + +L+ MY + + A + F
Sbjct: 99 SNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAF 158
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ M + V+ W++++ +G E LDMFS+M V+P+ +T +++ AC +G +
Sbjct: 159 DTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLR 218
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
LGR + R IE +I + G+ G L AE+L +P A W +++
Sbjct: 219 LGRSVHGYVVRR-EIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAP-WTPMISC 276
Query: 254 SNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 296
N G + L A K+EP+ +L A LGR E
Sbjct: 277 YNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC-ARLGRVKE 320
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H ++ GL+ P + LI+ YA+ G + +VF+ W +I G
Sbjct: 20 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 157 GREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQ 214
EA+ ++ M + + + + F ++L AC G + +G + + ++K + + +E
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ + G L +A K MP + W S++
Sbjct: 140 --SLLCMYGEMSCLDDACKAFDTMPIR-DVVAWSSIV 173
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 214/343 (62%), Gaps = 4/343 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT ++ Y+K GD +AR LF++M + +SWT +I+GYA+ +EA+ LF M V
Sbjct: 891 NTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVN 950
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 131
PD + +L+ +S C + G++E+G+WI + YG V + NALIDMY+K G I +A
Sbjct: 951 PDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARD 1010
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+N K+++TWTTMIAG AL+G+ EA+++FS+M KPN ITF+A+L AC H G
Sbjct: 1011 IFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGS 1070
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G YF+IMK Y I P ++ Y CM+DLLGR G L EA +L+ M + +A IWG+LL
Sbjct: 1071 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALL 1130
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A I+ +V++ E A L LEP + Y +SNIYA G W+ +IR +M+ +KK
Sbjct: 1131 SACKIHRNVKIAEQAADSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKK 1190
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PG S I+V+ + H F G+ H + + +Y L NG FA
Sbjct: 1191 YPGESVIQVNGKNHTFTVGERGHMENEAIYSTL---NGLSLFA 1230
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 23/258 (8%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
NT ++ Y K GDL++A+ +FE + ++ V+SW ++ +A + +A +R M +
Sbjct: 788 NTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDE 847
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
KPD + ++C + G IH++ G + + N I MY+KSG A
Sbjct: 848 FKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSAR 907
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ M +++ ++WT MI+G A G EAL +F M + V P+ +T ++++S C G
Sbjct: 908 LLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFG 967
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGC----------MIDLLGRAGYLQEAEKLLRRMPF 240
+E+G+ I+ + + YGC +ID+ + G + EA +
Sbjct: 968 SLEIGK----------WIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTS- 1016
Query: 241 EANAAIWGSLLAASNIYG 258
E W +++A + G
Sbjct: 1017 EKTMVTWTTMIAGYALNG 1034
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 121/259 (46%), Gaps = 10/259 (3%)
Query: 11 FWNTMVAGYA------KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
FW+ + G A K L+ A +FE M ++ +W +++G+ Q ++ +LFR
Sbjct: 679 FWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFSLFR 738
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+++ + PD + ++ + + + +++L + +H + + G++ ++N I Y K G
Sbjct: 739 EMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCG 798
Query: 125 KIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
+ A VFE + +++V++W ++ A+ G +A + M R KP+ TFI +
Sbjct: 799 DLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINL 858
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
++C + + G R + G + IE I + ++G A L MP
Sbjct: 859 AASCQNPQTLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMP-SR 916
Query: 243 NAAIWGSLLAASNIYGDVE 261
W +++ GD++
Sbjct: 917 TCVSWTVMISGYAEKGDMD 935
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 18/231 (7%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
+V +W + + P E++ LFR M+ +P+ ACA+L + E +H
Sbjct: 612 SVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVH 671
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
++ + + V + A +DM+ K + A +VFE M + TW M++G G
Sbjct: 672 THLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTD 731
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS---RYGIEPKIEQY 215
+ +F M + P+ +T + ++ + E + +M + R G++ +
Sbjct: 732 KVFSLFREMRLDEIPPDSVTVMTLIQSAS----FEKSLKLLKVMHAFGIRLGVDLQATVS 787
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEA------NAAIWGSLLAASNIYGDV 260
I G+ G L A ++ FEA W S+ A ++G+
Sbjct: 788 NTWISAYGKCGDLDSA-----KLVFEAIDRGDRTVVSWNSVFKAFAVFGEA 833
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 217/348 (62%), Gaps = 11/348 (3%)
Query: 19 YAKV-GDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEI 76
Y+K G + R +FE +T +++ W T+I+G++ D + + FR MQ +PD+
Sbjct: 288 YSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDC 347
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-----LNNALIDMYAKSGKIGKALQ 131
+ + SAC+ L + LG+ +H + + VP +NNAL+ MY+K G + A +
Sbjct: 348 SFVCVTSACSNLSSPSLGKQVH----ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARR 403
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + ++ +MIAG A HG+ E+L +F M + PN ITFIA+LSAC H G
Sbjct: 404 VFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGK 463
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G++YFN+MK R+ IEP+ E Y CMIDLLGRAG L+EAE+++ MPF + W +LL
Sbjct: 464 VEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G+VEL A ++LEP+N+ Y +LSN+YA RW E+ ++++MR+ GVKK
Sbjct: 524 GACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKK 583
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS+IE+ K+VH FVA DTSHP ++ + K+ +MK A ++ +
Sbjct: 584 KPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPD 631
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA Y+K G++++AR +F+ M E N +S ++IAGYAQ E++ LF M +++
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIA 445
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ I +A LSAC G VE G+ N + E++ + + +ID+ ++GK+ +A +
Sbjct: 446 PNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAER 505
Query: 132 VFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
+ E M N I W T++ HG L +A + F R+E P
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 10/254 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ YAK ++ AR +F+ + + +++S+ TLIA YA + + LF ++ +
Sbjct: 78 YNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRL 137
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + ++AC V L +H ++ G + +NNA++ Y++ G + +A +
Sbjct: 138 GLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARR 195
Query: 132 VFENMKN---KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA-CC 187
VF M + ++W MI H G EA+ +F M R +K + T ++L+A C
Sbjct: 196 VFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTC 255
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAI 246
LV G R F+ M + G +IDL + AG + E K+ + + +
Sbjct: 256 VKDLV--GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT-APDLVL 312
Query: 247 WGSLLAASNIYGDV 260
W ++++ ++Y D+
Sbjct: 313 WNTMISGFSLYEDL 326
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 208/334 (62%), Gaps = 2/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV G K+G ++AR LF+ M E+N++SW +++GY + + +A+ +F M+ V
Sbjct: 168 WTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGV 227
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A+ AC GA+ G +H ++EQ G+ L A++DMY K G + +A +
Sbjct: 228 DGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWR 287
Query: 132 VFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VFE + K + TW MI G A+HG G++AL +F RMER V P+++T + +L+AC H
Sbjct: 288 VFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHA 347
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G++ GR YFN + RYGIEPK+E YGCM+DL GRAG L+EA+K+++ MP E + + G+
Sbjct: 348 GMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGA 407
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L AS I+GDV+LGE +I+L+P NSG Y +L+N+ A GRW + ++R++M + V
Sbjct: 408 LFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNV 467
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 343
K G S IEV V EF G HP + +Y +
Sbjct: 468 SKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAM 501
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 213/341 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV G ++G +++AR +F+ M +N++SW ++I+GY + D+ +A+ +F M+ V
Sbjct: 167 WTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGV 226
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + +AL AC GA+ G I+ ++EQ G+ L A++DMY K G + +A
Sbjct: 227 EGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWG 286
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+++ + + TW MI G A+HG +AL++F +ME A V P+++T + +L+AC H G
Sbjct: 287 VFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGE 346
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GRRY N + SR+GIEPK E YGCM+DL GRAG L EA+K++ MP + + A+ G+LL
Sbjct: 347 VSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALL 406
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+GDV+LGE +I L+P NSG Y +L+N+ A GRW+E GK+R++M + V K
Sbjct: 407 GACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDERNVSK 466
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S IEV EF G+ HP +Y + + +++
Sbjct: 467 EAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIR 507
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y K G ++ A +F+ + + + +W +I G+A + ++A+ LF +M+
Sbjct: 266 KLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAA 325
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V PD++ +L L+ACA G V G ++++ + ++G+ ++D++ ++G++ +
Sbjct: 326 GVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDE 385
Query: 129 ALQVFENMK-NKSVITWTTMIAGLALHG 155
A +V + M + + ++ +HG
Sbjct: 386 AKKVIDEMPMDPDLAVLGALLGACKIHG 413
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 212/329 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K L +A +FE+ ++++++T++I Y+Q EA+ ++ RMQ ++K
Sbjct: 429 NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + +ACA L A E G+ IH ++ + GL + V N+L++MYAK G I A +
Sbjct: 489 PDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCI 548
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W+ MI GLA HG GR+AL +F +M + + PN IT +++LSAC H GLV
Sbjct: 549 FNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLV 608
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
RR+F +M+ +GI P E Y CM+D+LGR G L EA L++ MPF+A+AA+WG+LL
Sbjct: 609 TEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLG 668
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A+ I+ ++ELG A + L+ LEP SG + +L+NIYA G W+ K+R+ M++ VKK
Sbjct: 669 AARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKE 728
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PG S+IE+ +V+ F+ GD SHP +Y
Sbjct: 729 PGMSWIELKDKVYTFIVGDRSHPRSKEIY 757
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 43/284 (15%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA------------------- 59
Y+K AR L +E +++SW+ LI+GY Q + EA
Sbjct: 92 YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTF 151
Query: 60 ---------------------ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
+ L M + P+E ++ L+ACA L G +H
Sbjct: 152 SSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVH 211
Query: 99 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
Y+ + G ++ NAL+DMYAKSG A+ VF + +++W +IAG LH
Sbjct: 212 GYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKND 271
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
AL + +M RV P+ T + L AC +GLV+LGR+ + + + +EP +
Sbjct: 272 LALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALM-KMDMEPDSFVGVGL 330
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA-SNIYGDVE 261
ID+ + G LQ+A + MP + + +W S+++ SN D+E
Sbjct: 331 IDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISGYSNCGYDIE 373
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 147/295 (49%), Gaps = 15/295 (5%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L +AR +F+LM K+VI W ++I+GY+ EA++LF M E ++ ++ +
Sbjct: 334 YSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTL 393
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L + A A E +H + G + N+L+D Y K + A +VFE
Sbjct: 394 STILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPA 453
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ ++ +T+MI + +GLG EAL M+ RM+ +KP+ F ++ +AC ++ E G++
Sbjct: 454 EDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQI 513
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ +++K G+ + ++++ + G + +A + + + + W +++ +
Sbjct: 514 HVHVLKC--GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIGGLAQH 570
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSN---IYAILGRWNESGKIRKVMRDMGV 309
G G ALQ ++ + IL N + ++L N +G + + R G+
Sbjct: 571 GH---GRKALQLFYQMLKN-----GILPNHITLVSVLSACNHAGLVTEARRFFGL 617
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 7/266 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G A A+F + + +++SW +IAG ++ + A+ L +M V
Sbjct: 227 NALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA 286
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + +AL ACA +G V+LG +H+ + + + + LIDMY+K G + A V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K VI W ++I+G + G EA+ +F+ M + ++ N+ T IL +
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQAN 406
Query: 193 ELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ I +KS Y + + ++D G+ L++A K+ P E A + S++
Sbjct: 407 GFCEQVHTISIKSGYQYDGYVAN--SLLDSYGKCCLLEDAAKVFEVCPAEDLVA-YTSMI 463
Query: 252 AASNIYGDVELGECALQHLIKLEPHN 277
A + YG LGE AL+ ++++ +
Sbjct: 464 TAYSQYG---LGEEALKMYLRMQDRD 486
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 117 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 176
+++Y+K A ++ + +++W+ +I+G +G G EAL + M K NE
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 177 ITFIAILSACCHVGLVELGRR 197
TF ++L C +ELG++
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQ 169
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 213/347 (61%), Gaps = 1/347 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y ++ ++ AR LF+ EK + SW +I+G Q + AI+LF+ MQ NV P+ + +
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQ+GA+ LGEW+H+ I+ + V ++ ALIDMYAK G I A ++F+ M
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ +TW MI+G LHG G+EAL +F M + VKP +TF+++L AC H GLV+ G
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M +G EP E Y CM+D+LGRAG L++A + ++ MP E +WG+LL A I+
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHK 416
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
D L A + L +L+P N G Y ++SNIY++ ++ ++ +R+V + + K PGC+ I
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
E+ + H F +GD SHP +Y L K+ G+M A Q E + VL
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAG-FQTETTTVL 522
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ ++K G++ AR LF + +K++IS +I+G+ + +++ LF+ + +
Sbjct: 72 LISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS 131
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ + + G L IH + + G+ + ++ AL +Y + ++ A Q+F+
Sbjct: 132 SSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFD 191
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
K++ +W MI+G +GL A+ +F M++ V PN +T +ILSAC +G + L
Sbjct: 192 ESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSL 251
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +++KS E + +ID+ + G + A +L MP E N W ++++
Sbjct: 252 GEWVHSLIKSNR-FESNVYVSTALIDMYAKCGSITVARELFDLMP-EKNEVTWNAMISGY 309
Query: 255 NIYG 258
++G
Sbjct: 310 GLHG 313
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 222/349 (63%), Gaps = 3/349 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V YAK G++ AR +F+ M E+N ISW ++++GY Q +P +A++LF +MQ
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD 331
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L +SAC+ LG+ LG +HN++ ++ L NA++DMY K G + A+++
Sbjct: 332 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 391
Query: 133 FEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F N + + V +W +I+G +HG G+EAL++FSRM+ V+PN+ITF +ILSAC H G
Sbjct: 392 FNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAG 451
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L++ GR+ F M ++ + P+++ Y CM+D+LGRAG+L EA +L++++P + +WG+L
Sbjct: 452 LIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGAL 510
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A I+G+ ELGE A +L +LEP ++G Y ++SNIYA +W E +R+ M+ G+K
Sbjct: 511 LLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLK 570
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
K S IE VH F D S P + +Y+ + + +MK ++ +
Sbjct: 571 KPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPD 619
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 153/278 (55%), Gaps = 12/278 (4%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G++ +A +F+ M ++V+ WT +I Y Q ++P +A+ LFR+MQ E D
Sbjct: 173 LVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGD 232
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
EI ++ SA QLG + +H Y G V + N+++ MYAK G + +A VF+
Sbjct: 233 EITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFD 292
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M+ ++ I+W +M++G +G +AL +F++M+ + PN +T + ++SAC ++G L
Sbjct: 293 RMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHL 352
Query: 195 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLA 252
GR+ N ++ S+ I+ + ++D+ + G L A ++ E + + W L++
Sbjct: 353 GRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLIS 410
Query: 253 ASNIYGDVELGECALQHLIKL-----EPHNSGNYAILS 285
++G G+ AL+ ++ EP++ +ILS
Sbjct: 411 GYGVHGH---GKEALELFSRMQVEGVEPNDITFTSILS 445
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTE--------KNVISWTTLIAGYAQMDQPNEAITL 62
F ++ Y+K+GDL++AR LF+ N T++ YA + EAI L
Sbjct: 60 FLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDL 119
Query: 63 FRRMQVENVKPDEIAMLAALSACA-QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ MQ V + L CA +LGAV GE +H + + G + + + AL+DMYA
Sbjct: 120 YIYMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVRTGFGSDLFVEAALVDMYA 178
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G+IG A +VF+ M + V+ WT MI +AL +F +M+ +EIT I+
Sbjct: 179 KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAIS 238
Query: 182 ILSACCHVGLVELGRRYFNIMKSRY--GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ SA VG + GR ++ G + ++ + + G ++ A + RM
Sbjct: 239 VASA---VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME 295
Query: 240 FEANAAIWGSLLAA 253
E N W S+L+
Sbjct: 296 -ERNGISWNSMLSG 308
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 238/355 (67%), Gaps = 3/355 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G + AR +F+ + E++V+S T +I+GYAQ+ EA+ LFRR+Q E ++
Sbjct: 617 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 676
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ + + L+A + L A++ G +H+++ + L V L N+LIDMY+K G + + ++
Sbjct: 677 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F++M ++VI+W M+ G + HGLGREA+++F M E +VKP+ +TF+A+LS C H G+
Sbjct: 737 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 796
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ G ++ ++ + G EP+IE YGC++DL GRAG ++EA + +++MPFE AAIWGSL
Sbjct: 797 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 856
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ +V +GE + L+++E N+GNY ILSN+YA GRW++ +R++M++ V
Sbjct: 857 LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 916
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 365
K PG S+IE+ + +H F A D SHP + ++ + +++ ++K A ++ E S VL
Sbjct: 917 KEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVP-ELSCVL 970
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 140/245 (57%), Gaps = 4/245 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y K L +AR + + M E+NV+SWT +I+GY+Q +EA+ LF M + P+
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 577
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E L++C +LG IH+ + + + + + ++L+DMYAK+GKI +A +VF+
Sbjct: 578 EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFD 637
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + V++ T +I+G A GL EALD+F R++R ++ N +T+ ++L+A + ++
Sbjct: 638 GLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDH 697
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
GR+ + ++++++ ++ +ID+ + G L + ++ MP E W ++L
Sbjct: 698 GRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVG 754
Query: 254 SNIYG 258
+ +G
Sbjct: 755 YSKHG 759
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
+ L+ C A+ G+ +H ++ + V L LI +Y K +G A +V + M +
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
+V++WT MI+G + G EAL +F M + PNE TF +L++C +LGR+
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+++ + E I ++D+ +AG + EA ++ +P E + ++++ Y
Sbjct: 602 SLV-IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP-ERDVVSCTAIISG---YAQ 656
Query: 260 VELGECALQHLIKLEPHN-SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
+ L E AL +L+ NY +++ L R+V + K+P
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 711
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 215/346 (62%), Gaps = 2/346 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GD+ A +F M KNV+SWT+LI+G + Q EA++L MQ
Sbjct: 157 WNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGF 216
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D +A+ + L+ACA LGA++ G W+H Y+ G++ + AL++MY K G + +AL
Sbjct: 217 ELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALS 276
Query: 132 VFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF +K K V WT MI G A+HG G EAL+ F+RM R ++PN ITF A+L AC +
Sbjct: 277 VFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYG 336
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+ F MK Y + P IE YGCM+DLLGR+G L EA++L+++MP + +A IWG+
Sbjct: 337 GLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGA 396
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+ D LG HL++++ +SG Y L+ I A G+W E+ ++R M+ +GV
Sbjct: 397 LLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGV 456
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
PG S + ++ VHEF+AG HP +++ L +I +++ E
Sbjct: 457 PISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDE 502
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
+ T +L KF + + VGDL A+ +F +T N W +I Y+ D+P A
Sbjct: 16 IITEPKLATKFLTLCTSPH--VGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAF 73
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
+++M +V + L AC L A+ +H + + G + V NAL+ +Y
Sbjct: 74 LSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVY 133
Query: 121 AKSGKIGKALQVFEN-------------------------------MKNKSVITWTTMIA 149
A G+I A Q+F+N M K+V++WT++I+
Sbjct: 134 ALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLIS 193
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGI 208
GL G EAL + M+ A + + + ++L+AC ++G ++ GR +F ++ + +
Sbjct: 194 GLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDV 253
Query: 209 EPKIEQYGC-MIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAASNIYG 258
+ I GC ++++ + G ++EA + ++ + + IW +++ I+G
Sbjct: 254 DRVI---GCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHG 302
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L++A +FE + ++I+ T++I +Q D AI LF M + ++
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + + NAL+ YAK G I A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + V++W+ MI GLA HG G+ AL++F RM + PN IT ++L AC H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +RYFN MK +GI+ E Y CMIDLLGRAG L +A +L+ MPF+ANA+IWG+LL
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG+ A + L LEP SG + +L+N YA G WNE K+RK+M+D +KK
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKE 742
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S+IEV +VH F+ GD SHP +Y L ++ M A + N
Sbjct: 743 PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPN 789
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G +++AR +F E +E+N +SW L++ Y + DQ +AI +F M +
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P E ++AC +E G +H + + G + V NAL+DMY K G++ A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M + V++W +I+G L+G A+++ +M+ + + PN T +IL AC G
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+LGR+ M G ++D+ + +L +A K+ M
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM 364
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K+G ++ A +FE M + +V+SW LI+G + AI L +M+ +
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L AC+ GA +LG IH ++ + ++ + L+DMYAK+ + A +V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ M ++ +I +I+G + G EAL +F + + + N T A+L +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L F N +++ Y+K AR F+ + + +SW++L+ Y+ P AI F M+
Sbjct: 36 LASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMR 95
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
E V +E A+ L LG +H G + V + NAL+ MY G +
Sbjct: 96 AEGVCCNEFALPVVLKCVPD---ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMD 152
Query: 128 KALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A +VF E ++ ++W +++ + +A+ +F M + ++P E F +++AC
Sbjct: 153 DARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC 212
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+E GR+ + M R G + + ++D+ + G + A + +MP +++
Sbjct: 213 TGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVS 270
Query: 247 WGSLLAASNIYG 258
W +L++ + G
Sbjct: 271 WNALISGCVLNG 282
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK L++AR +F+ M +++I LI+G + + +EA++LF ++ E + +
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ A L + A L A +H + G + N LID Y K + A +VFE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +I T+MI L+ G A+ +F M R ++P+ ++L+AC + E
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ + R + ++ + G +++AE +P E W +++
Sbjct: 524 GKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGL 581
Query: 255 NIYG 258
+G
Sbjct: 582 AQHG 585
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G +H + + G ++ N LI Y+K + A + F+ + + ++W++++ +
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GL R A+ F M V NE +L V LG + + M G +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQ-VHAMAMATGFGSDVF 136
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G G++ +A ++ E NA W L++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 202/335 (60%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G L A + E + E+ +SW ++I+G++ Q A++ F RM V PD
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L CA L VELG+ IH I + L++ V + + ++DMY+K G + + +FE
Sbjct: 578 ATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPK 637
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ +TW+ MI A HGLG +A+ +F M+ VKPN FI++L AC H+G V+ G Y
Sbjct: 638 RDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHY 697
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M+S YG++P++E Y CM+DLLGR+G + EA +L+ MPFEA+ IW +LL + G
Sbjct: 698 FREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG 757
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VE+ E A L++L+P +S Y +LSN+YAI G W E KIR M++ +KK PGCS+I
Sbjct: 758 NVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
+V VH F+ GD +HP + +YQ + +MK+
Sbjct: 818 QVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKW 852
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 141/266 (53%), Gaps = 7/266 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YAK G L A +F+ M K+ +SW +IA + Q + E + LF M ++
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + + ACA A+ G +H + + G+ + +A+IDMY K G + +A ++
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
E ++ ++ ++W ++I+G + G AL FSRM + V P+ T+ +L C ++ V
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG++ + I+K + + + ++D+ + G +Q++ + + P + + W +++
Sbjct: 591 ELGKQIHGQILKLQ--LHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMI 647
Query: 252 AASNIYGDVELGECALQHLIKLEPHN 277
A +G LGE A++ +++ N
Sbjct: 648 CAYAYHG---LGEDAIKLFEEMQLQN 670
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 133/256 (51%), Gaps = 7/256 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK + +AR +F S LI GYA+ DQ EA+ +FR +Q + DEI++
Sbjct: 316 YAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL+AC+ + G +H + GL+ + + N ++DMYAK G + +A +F++M+
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K ++W +IA + E L +F M R+ ++P++ TF +++ AC + G
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++KS G++ + +ID+ + G L EAEK+ R+ E W S+++ +
Sbjct: 496 HGRVIKSGMGLDWFVG--SAIIDMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISG---F 549
Query: 258 GDVELGECALQHLIKL 273
+ GE AL + ++
Sbjct: 550 SSEKQGENALSYFSRM 565
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA VG++ A+ LF+ M E++V+SW ++++ Y Q ++I +F +M++ +
Sbjct: 107 WNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEI 166
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D L AC + LG +H Q G ++ V AL+DMY+ K+ A
Sbjct: 167 QHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFN 226
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++ + W+ +IAG + E L ++ M + ++ TF + +C +
Sbjct: 227 IFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSA 286
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
ELG + + +K+ +G + + +D+ + + +A K+ P
Sbjct: 287 FELGTQLHAYALKTNFGYDNIVGT--ATLDMYAKCDRMVDARKVFNTFP 333
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V Y+ L++A +F M E+N + W+ +IAGY + D+ E + L++ M E +
Sbjct: 209 TALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMG 268
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ +A +CA L A ELG +H Y +G + IV A +DMYAK ++ A
Sbjct: 269 VSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV--GTATLDMYAKCDRMVDAR 326
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF N + + +I G A EAL++F ++++ + +EI+ L+AC +
Sbjct: 327 KVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIK 386
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + + + G++ I ++D+ + G L EA + M + +A W ++
Sbjct: 387 GYLEGIQ-LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAI 444
Query: 251 LAA 253
+AA
Sbjct: 445 IAA 447
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y+K G++ ++R +FE +++ ++W+ +I YA +AI LF MQ++NVK
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVK 672
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGKA 129
P+ ++ L ACA +G V+ G +H + E YGL+ + + ++D+ +SG++ +A
Sbjct: 673 PNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEA 730
Query: 130 LQVFENMK-NKSVITWTTMIAGLALHG 155
L++ E+M + W T++ L G
Sbjct: 731 LELIESMPFEADDVIWRTLLGICRLQG 757
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 33/199 (16%)
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C+ L A+ G+ H I G V ++N L+ Y K + A VF+ M + VI+W
Sbjct: 48 CSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISW 107
Query: 145 TTMIAGLA-------------------------------LHGLGREALDMFSRMERARVK 173
TMI G A +G R+++++F++M ++
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
+ TF +L AC + LG + + + + G + + ++D+ L A
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQ-VHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFN 226
Query: 234 LLRRMPFEANAAIWGSLLA 252
+ MP E N+ W +++A
Sbjct: 227 IFCEMP-ERNSVCWSAVIA 244
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 213/336 (63%), Gaps = 1/336 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y ++ ++ AR LF+ EK++ SW +I+GY Q + AI+LF+ M + + P+ + +
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTV 418
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLGA+ +G+W+H I+ L + V ++ AL+DMYAK G I +A Q+F+ M +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+V+TW MI G LHG G+EAL +F M ++ + P +TF++IL AC H GLV G
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M + YG +P E Y CM+D+LGRAG L A + + RMP E A+WG+LL A I+
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ E+ A + L +L+P N G Y +LSNIY+ + ++ +R+V++ + K PGC+ I
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
E+ + + F +GD SHP ++++L K+ G+M+ A
Sbjct: 659 EIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREA 694
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ Y+K G R LF+ + + ++IS+ +I+GY + A+TLFR + + +
Sbjct: 255 LISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ + ++L I N + G+ ++ AL +Y + ++ A Q+F+
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFD 374
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
KS+ +W MI+G +GL A+ +F M ++ PN +T +ILSAC +G + +
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ ++KS +E + ++D+ + G + EA +L M + N W +++
Sbjct: 434 GKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGY 491
Query: 255 NIYG 258
++G
Sbjct: 492 GLHG 495
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G + AR LF+LM +KNV++W +I GY EA+ LF M + P
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515
Query: 75 EIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L+ L AC+ G V G E H+ YG + ++D+ ++G++ AL+
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575
Query: 134 ENMK-NKSVITWTTMIAGLALH 154
E M W ++ +H
Sbjct: 576 ERMPLEPGPAVWGALLGACMIH 597
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 9/288 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K AR +F++M E++ + W T+I+G+++ ++I +F M +
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + L+A A+L LG I + GL++ V + LI +Y+K GK K +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + +I++ MI+G + A+ +F + + + N T + ++ +
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 193 ELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+L R N+ +K ++P + + + R +Q A +L P E + A W +++
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVST--ALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMI 388
Query: 252 AASNIYGDVELGECALQHLI-KLEPHNSGNYAILSNIYAI----LGRW 294
+ G + Q ++ +L P+ +ILS + +G+W
Sbjct: 389 SGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
++++L +KF++ +G + + R LF +++ ++ + LI G++ P +I L
Sbjct: 48 SITKLTHKFFD--------LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99
Query: 63 FRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ + + N++PD A+SA ++L +G +H + G+ + + + +A++D+Y
Sbjct: 100 YTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 159
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K + A +VF+ M + + W TMI+G + + +++ +F M + + T
Sbjct: 160 KFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLAT 219
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
+L+A + LG + S+ G+ + +I L + G
Sbjct: 220 VLTAVAELQEYRLGMG-IQCLASKKGLHSDVYVLTGLISLYSKCG 263
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 213/336 (63%), Gaps = 1/336 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y ++ ++ AR LF+ EK++ SW +I+GY Q + AI+LF+ M + + P+ + +
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTV 418
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLGA+ +G+W+H I+ L + V ++ AL+DMYAK G I +A Q+F+ M +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+V+TW MI G LHG G+EAL +F M ++ + P +TF++IL AC H GLV G
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M + YG +P E Y CM+D+LGRAG L A + + RMP E A+WG+LL A I+
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+ E+ A + L +L+P N G Y +LSNIY+ + ++ +R+V++ + K PGC+ I
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
E+ + + F +GD SHP ++++L K+ G+M+ A
Sbjct: 659 EIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREA 694
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ Y+K G R LF+ + + ++IS+ +I+GY + A+TLFR + + +
Sbjct: 255 LISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++ + ++L I N + G+ ++ AL +Y + ++ A Q+F+
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFD 374
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
KS+ +W MI+G +GL A+ +F M ++ PN +T +ILSAC +G + +
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ ++KS +E + ++D+ + G + EA +L M + N W +++
Sbjct: 434 GKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGY 491
Query: 255 NIYG 258
++G
Sbjct: 492 GLHG 495
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK G + AR LF+LM +KNV++W +I GY EA+ LF M + P
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515
Query: 75 EIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L+ L AC+ G V G E H+ YG + ++D+ ++G++ AL+
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575
Query: 134 ENMK-NKSVITWTTMIAGLALH 154
E M W ++ +H
Sbjct: 576 ERMPLEPGPAVWGALLGACMIH 597
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 9/288 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K AR +F++M E++ + W T+I+G+++ ++I +F M +
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + L+A A+L LG I + GL++ V + LI +Y+K GK K +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + +I++ MI+G + A+ +F + + + N T + ++ +
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 193 ELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+L R N+ +K ++P + + + R +Q A +L P E + A W +++
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVST--ALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMI 388
Query: 252 AASNIYGDVELGECALQHLI-KLEPHNSGNYAILSNIYAI----LGRW 294
+ G + Q ++ +L P+ +ILS + +G+W
Sbjct: 389 SGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
++++L +KF++ +G + + R LF +++ ++ + LI G++ P +I L
Sbjct: 48 SITKLTHKFFD--------LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99
Query: 63 FRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ ++ + N++PD A+SA ++L +G +H + G+ + + + +A++D+Y
Sbjct: 100 YTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 159
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K + A +VF+ M + + W TMI+G + + +++ +F M + + T
Sbjct: 160 KFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLAT 219
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
+L+A + LG + S+ G+ + +I L + G
Sbjct: 220 VLTAVAELQEYRLGMG-IQCLASKKGLHSDVYVLTGLISLYSKCG 263
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 207/323 (64%), Gaps = 2/323 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ +AK+G+ +A ++F+ M + I W ++I G+AQ + + A+ LF+RM+
Sbjct: 150 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 209
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
++ + + L AC L +ELG H +I +Y + I LNNAL+DMY K G + A +V
Sbjct: 210 AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDARRV 267
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK + VITW+TMI+GLA +G +EAL +F M+ + KPN IT + +L AC H GL+
Sbjct: 268 FNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLL 327
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF MK YGI P E YGCMIDLLG+AG L +A KLL M E +A W +LL
Sbjct: 328 EDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 387
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + ++ L E A + +I L+P ++G Y +LSNIYA +W+ +IRK MRD+G+KK
Sbjct: 388 ACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKE 447
Query: 313 PGCSYIEVSKRVHEFVAGDTSHP 335
PGCS+IEV+K++H F+ GD SHP
Sbjct: 448 PGCSWIEVNKQIHAFIIGDESHP 470
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 151/327 (46%), Gaps = 48/327 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K LN+A LF+ M ++NVISWTT+I+ Y++ +A+ L M + V+
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + L AC + V + +H I + GL + V + +ALID++AK G+ AL V
Sbjct: 112 PNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSV 168
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M I W ++I G A + AL++F RM+RA + T ++L AC + L+
Sbjct: 169 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 228
Query: 193 ELG---------------------------------RRYFNIMKSRYGIEPKIEQYGCMI 219
ELG RR FN MK R + + MI
Sbjct: 229 ELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKER-----DVITWSTMI 283
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANA----AIWGSLLAASNIYGDVELGECALQHLIKLEP 275
L + GY QEA KL M I G L A S+ G +E G + + KL
Sbjct: 284 SGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHA-GLLEDGWYYFRSMKKLYG 342
Query: 276 HNSG--NYAILSNIYAILGRWNESGKI 300
N G +Y + ++ G+ +++ K+
Sbjct: 343 INPGREHYGCMIDLLGKAGKLDDAVKL 369
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
+Q + D + C AV G I ++ G ++ L N LI+MY K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R V+PN T+ ++L A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C G+ ++ + I+K G+E + +ID+ + G ++A + M +A
Sbjct: 124 C--NGMSDVRMLHCGIIKE--GLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAI 178
Query: 246 IWGSLLA--ASNIYGDVEL 262
+W S++ A N DV L
Sbjct: 179 VWNSIIGGFAQNSRSDVAL 197
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 220/332 (66%), Gaps = 1/332 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G +++A +FE + EK++++W ++I G++Q EAITLF +M + VK
Sbjct: 639 NALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK 698
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D++ L+ + AC+ LG +E G+W+H+ + YGL L+ AL DMY+K G++ A V
Sbjct: 699 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 758
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M +S+++W+ MIAG +HG + +F++M + +KPN+ITF+ ILSAC H G V
Sbjct: 759 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAV 818
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ YFN M S +G+EPK + + CM+DLL RAG L A +++ +PF AN++IWG+LL
Sbjct: 819 EEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLN 877
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I+ +++ + ++L+ ++ ++G Y +LSNIYA G W++ GK+R +M+ G++K+
Sbjct: 878 GCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKV 937
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IE+ K+++ F GDTSH +Y+ L
Sbjct: 938 PGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFL 969
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 141/245 (57%), Gaps = 9/245 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YA G+L + +FE + EK ++SW TLI+ + + QP EA+ LF +MQ + + PD ++
Sbjct: 545 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
++LSAC + +LG IH YI + G N V NALIDMYAK G + A ++FE +K
Sbjct: 605 ASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV--QNALIDMYAKCGFVHSANKMFEKIK 662
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
KS++TW +MI G + +G EA+ +F +M VK +++TF++++ AC H+G +E G+
Sbjct: 663 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 722
Query: 198 YFN--IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
+ IM YG+ + D+ + G LQ A + RM E + W ++A
Sbjct: 723 VHHKLIM---YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYG 778
Query: 256 IYGDV 260
++G +
Sbjct: 779 MHGQI 783
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 126/265 (47%), Gaps = 26/265 (9%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI--------AGYAQMD------QPN 57
W ++ Y G A +L+ M ++ + + +G+ + Q +
Sbjct: 414 WGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQAS 473
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW--------IHNYIEQYGLNTI 109
E + +F +M E V+PD + ML+ AC++LG++ LG +H ++ + ++
Sbjct: 474 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPE 533
Query: 110 VP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 168
+ L AL+++YA +G + +VFE +K K++++W T+I+ +G EAL +F +M+
Sbjct: 534 LDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQ 593
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ P+ + + LSAC + +LG + + ++ +ID+ + G++
Sbjct: 594 TQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFV 651
Query: 229 QEAEKLLRRMPFEANAAIWGSLLAA 253
A K+ ++ E + W S++
Sbjct: 652 HSANKMFEKIK-EKSLVTWNSMICG 675
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 213/325 (65%), Gaps = 1/325 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W +M+ Y++VG++ AR F+ M+EKNVI+W ++ Y Q + + +++ M E
Sbjct: 440 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 499
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD + + CA LGA +LG+ I + GL + NA+I MY+K G+I +A
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 559
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + K +++W MI G + HG+G++A+++F + + KP+ I+++A+LS C H G
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G+ YF++MK + I P +E + CM+DLLGRAG+L EA+ L+ MP + A +WG+L
Sbjct: 620 LVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGAL 679
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A I+G+ EL E A +H+ +L+ +SG+Y +++ IYA G+ ++S +IRK+MRD G+K
Sbjct: 680 LSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIK 739
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PG S++EV +VH F A D SHP
Sbjct: 740 KNPGYSWMEVDNKVHVFKADDVSHP 764
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+AGY K +++A LF+ M E++V+SW +++ +Q + EA+ + MQ + V+
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAKSG +A
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKG 326
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ +++ + WT +I+G +G E++++F++M + ++ ++S CC
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LGR+ ++ I+ + +I + + LQ AE + R M E + W S++
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 444
Query: 252 AASNIYGDV 260
A + G+V
Sbjct: 445 TAYSQVGNV 453
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N M+ GYAK+G L++A LF M ++V SW TL++GY Q Q ++ F M +
Sbjct: 75 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 134
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------ 125
P+ + A+ +C LG L + ++++ + AL+DM+ + G
Sbjct: 135 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 194
Query: 126 -------------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ AL++F++M + V++W M++ L+ G REA
Sbjct: 195 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
LDM M+ V+ + T+ + L+AC + + G++ + ++++ I+P + ++
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS--ALV 312
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+L ++G +EA+ + + N A W L++ YG
Sbjct: 313 ELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYG 350
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK G A+ +F + ++N ++WT LI+G+ Q E++ LF +M+ E +
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ A+ +S C + LG +H+ + G V ++N+LI MYAK + A +
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K +++WT+MI + G +A + F M + N IT+ A+L A G
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAE 484
Query: 193 ELGRRYFNIMKSRYGIEPKIEQY 215
E G R + +M S + P Y
Sbjct: 485 EDGLRMYKVMLSEEYVRPDWVTY 507
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
V +N +++ YAK G++ A+++F M + V +W T+++G +L+ F M R
Sbjct: 71 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130
Query: 170 ARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ PN T + +C +G L + +++ ++ + E ++D+ R G +
Sbjct: 131 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ-KFDSQDDSEVAAALVDMFVRCGAV 189
Query: 229 QEAEKLLRRM 238
A +L R+
Sbjct: 190 DLASRLFVRI 199
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 219/329 (66%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++++ Y G A+ LF+ M ++++SW +IAGY+Q P+EAI LFR+M + ++P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
EIA++ AC+QL A+ LG+ +H + + L + +++++IDMYAK G IG + ++F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ ++ K V +W +IAG +HG G+EAL++F +M R +KP++ TF IL AC H GLVE
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G YFN M + + IEPK+E Y C++D+LGRAG + +A +L+ MP + ++ IW SLL++
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
I+G++ LGE L++LEP NY ++SN++A G+W++ ++R M+D+G++K
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
GCS+IEV +VH F+ GD P+ + + +
Sbjct: 650 GCSWIEVGGKVHNFLIGDEMLPELEEVRE 678
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 132/247 (53%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNA-RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N ++A Y K G + A + +F+LM K V SW L+ GYAQ P +A+ L+ +M +
Sbjct: 247 NALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGL 306
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + + L AC+++ ++ GE IH + + GL + +L+ +Y GK A
Sbjct: 307 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 366
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M+++S+++W MIAG + +GL EA+++F +M ++P EI + + AC +
Sbjct: 367 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 426
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LG+ + + + I +ID+ + G + ++++ R+ E + A W ++
Sbjct: 427 LRLGKE-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVII 484
Query: 252 AASNIYG 258
A I+G
Sbjct: 485 AGYGIHG 491
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 107/201 (53%), Gaps = 3/201 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKP 73
++ Y+ G +++R +F+ + KN+ W +++ Y + + +A+++F + V KP
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 206
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ-V 132
D + + ACA L + LG+ IH + L + V + NALI MY K G + +A++ V
Sbjct: 207 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+V +W ++ G A + R+ALD++ +M + + P+ T ++L AC + +
Sbjct: 267 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 326
Query: 193 ELGRRYFNI-MKSRYGIEPKI 212
G +++ ++P I
Sbjct: 327 HYGEEIHGFALRNGLAVDPFI 347
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G + ++ +F+ + EK+V SW +IAGY + EA+ LF +M +K
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ L AC+ G VE G E+ + + + + + ++DM ++G+I AL+
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 569
Query: 132 VFENMK-NKSVITWTTMIAGLALH---GLGREALDMFSRMERARVKPNEITFIAILSA 185
+ E M + W+++++ +H GLG + + +E KP I+ L A
Sbjct: 570 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLISNLFA 625
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 77 AMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
AM L AC Q +E+G +H + Q+ N V LN +I MY+ G + VF
Sbjct: 107 AMGVLLQACGQRKDIEVGRRLHEMVSASTQF-CNDFV-LNTRIITMYSMCGSPSDSRMVF 164
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLV 192
+ ++ K++ W +++ + L +A+ +FS + KP+ T ++ AC GL+
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLL 222
Query: 193 ELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG + + M ++ + + +I + G+ G ++EA K + + + W +LL
Sbjct: 223 DLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
Query: 252 AA 253
Sbjct: 283 CG 284
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 214/346 (61%), Gaps = 4/346 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN+++ G+ + G +N A+ +F M + N+I+WTTLI+G AQ EAI F++MQ
Sbjct: 488 WNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ 547
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++P ++ + L AC + ++ G IH +I ++ VP+ +L+DMYAK G I
Sbjct: 548 EAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSID 607
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+A +VF M +K + + MI+ ALHG EAL +F +++ ++P+ ITF +ILSAC
Sbjct: 608 EAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACS 667
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV G F M S++ + P +E YGC++ LL R G L EA +L+ MPF+ +A I
Sbjct: 668 HAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHIL 727
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLL A + ++ELGE +HL KLEP NSGNY LSN YA GRW E +R +M+
Sbjct: 728 GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVR 787
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
G++K PGCS+I+ +++ FVAGD SHP + +Y +L + +M+F
Sbjct: 788 GLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRF 833
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 18/310 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y+KVG + +A +F M EK+V++W LI+ Y Q Q +A+ + M+ EN++
Sbjct: 322 SSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 381
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + LSA A ++LG+ H Y + L + V + N++IDMYAK +I A +V
Sbjct: 382 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKV 441
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++ + ++ W T++A A GL EAL +F +M+ V PN I++ +++ G V
Sbjct: 442 FDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQV 501
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN-----AAIW 247
+ F+ M+S G +P + + +I L ++G+ EA ++M EA A+I
Sbjct: 502 NEAKDMFSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ-EAGIRPSIASIT 559
Query: 248 GSLLAASNI----YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
LLA ++I YG G P + L ++YA G +E+ +KV
Sbjct: 560 SVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCGSIDEA---KKV 612
Query: 304 MRDMGVKKMP 313
M K++P
Sbjct: 613 FHMMSSKELP 622
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 151/304 (49%), Gaps = 13/304 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y K G L +AR +F+ M EKNV++W ++I GY Q EAI +F M+VE ++
Sbjct: 221 SSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIE 280
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + + LSA A L A+ G+ H L+ L +++I+ Y+K G I A V
Sbjct: 281 PTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELV 340
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K V+TW +I+ H +AL+M M ++ + +T +ILSA +
Sbjct: 341 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 400
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG+ + R +E + +ID+ + + +A K+ E + +W +LLA
Sbjct: 401 KLGKEG-HCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTT-ERDLVLWNTLLA 458
Query: 253 ASNIYGDVELGECALQHLIKLE----PHN--SGNYAILSNIYAILGRWNESGKIRKVMRD 306
A Y V L AL+ +++ P N S N IL + G+ NE+ + M+
Sbjct: 459 A---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRN--GQVNEAKDMFSQMQS 513
Query: 307 MGVK 310
+G +
Sbjct: 514 LGFQ 517
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 4/240 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK A LF + +NV SW ++ +M +A+ F MQ V PD
Sbjct: 122 LVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPD 181
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC L + LG+ +H Y+ + G V ++++L+DMY K G + A +VF+
Sbjct: 182 NFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFD 241
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVE 193
+M K+V+TW +MI G +GL +EA+D+F M ++P +T + LSA ++ L+E
Sbjct: 242 SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIE 301
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + + + ++ + +I+ + G +++AE + RM E + W L+++
Sbjct: 302 GKQGHAIAILNSLDLDNILGS--SIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISS 358
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 219/329 (66%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++++ Y G A+ LF+ M ++++SW +IAGY+Q P+EAI LFR+M + ++P
Sbjct: 448 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 507
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
EIA++ AC+QL A+ LG+ +H + + L + +++++IDMYAK G IG + ++F
Sbjct: 508 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 567
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ ++ K V +W +IAG +HG G+EAL++F +M R +KP++ TF IL AC H GLVE
Sbjct: 568 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 627
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G YFN M + + IEPK+E Y C++D+LGRAG + +A +L+ MP + ++ IW SLL++
Sbjct: 628 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 687
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
I+G++ LGE L++LEP NY ++SN++A G+W++ ++R M+D+G++K
Sbjct: 688 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 747
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 342
GCS+IEV +VH F+ GD P+ + + +
Sbjct: 748 GCSWIEVGGKVHNFLIGDEMLPELEEVRE 776
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +A Y + G L ++ +F+LM K V SW L+ GYAQ P +A+ L+ +M +
Sbjct: 346 NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD 405
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L AC+++ ++ GE IH + + GL + +L+ +Y GK A +
Sbjct: 406 PDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVL 465
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+++S+++W MIAG + +GL EA+++F +M ++P EI + + AC + +
Sbjct: 466 FDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSAL 525
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG+ + + + I +ID+ + G + ++++ R+ E + A W ++A
Sbjct: 526 RLGKE-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIA 583
Query: 253 ASNIYG 258
I+G
Sbjct: 584 GYGIHG 589
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 125/243 (51%), Gaps = 7/243 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKP 73
++ Y+ G +++R +F+ + KN+ W +++ Y + + +A+++F + V KP
Sbjct: 40 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 99
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D + + ACA L + LG+ IH + L + V + NALI MY K G + +A++VF
Sbjct: 100 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVF 159
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM---ERARVKPNEITFIAILSACCHVG 190
E+M +++++W ++I G + +G +E+ + F M E + V P+ T + +L C
Sbjct: 160 EHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFV-PDVATLVTVLPVCAGEE 218
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E G + + G+ ++ +ID+ + +L EA+ L + + N W S+
Sbjct: 219 DIEKGMAVHG-LAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSM 276
Query: 251 LAA 253
+
Sbjct: 277 IGG 279
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--EN 70
N ++A Y K G + A +FE M E+N++SW ++I G+++ E+ FR M V E+
Sbjct: 140 NALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEES 199
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
PD ++ L CA +E G +H + GLN + +NN+LIDMY+K + +A
Sbjct: 200 FVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQ 259
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCH 188
+F+ K++++W +MI G A + +M E A++K +E T + +L C
Sbjct: 260 LLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC-- 317
Query: 189 VGLVELGRRYFNIMKS------RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L R +K R+G++ I R G L +E++ M +
Sbjct: 318 -----LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT 372
Query: 243 NAAIWGSLLAA 253
++ W +LL
Sbjct: 373 VSS-WNALLCG 382
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
N+++ Y+K L+ A+ LF+ +KN++SW ++I GYA+ + L ++MQ E+
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+K DE +L L C + ++ + +H Y ++GL + + NA I Y + G + +
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M K+V +W ++ G A + R+ALD++ +M + + P+ T ++L AC +
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422
Query: 191 LVELGRRYFNI-MKSRYGIEPKI 212
+ G +++ ++P I
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFI 445
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YAK G + ++ +F+ + EK+V SW +IAGY + EA+ LF +M +K
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ L AC+ G VE G E+ + + + + + ++DM ++G+I AL+
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 132 VFENMK-NKSVITWTTMIAGLALH---GLGREALDMFSRMERARVKPNEITFIAILSA 185
+ E M + W+++++ +H GLG + + +E KP I+ L A
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLISNLFA 723
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 82 LSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC Q +E+G +H + Q+ N V LN +I MY+ G + VF+ ++
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQF-CNDFV-LNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELG-R 196
K++ W +++ + L +A+ +FS + KP+ T ++ AC GL++LG
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLG 120
Query: 197 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + M ++ + + +I + G+ G ++EA K+ MP E N W S++
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICG 176
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 213/325 (65%), Gaps = 1/325 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
W +M+ Y++VG++ AR F+ M+EKNVI+W ++ Y Q + + +++ M E
Sbjct: 460 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 519
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD + + CA LGA +LG+ I + GL + NA+I MY+K G+I +A
Sbjct: 520 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 579
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + K +++W MI G + HG+G++A+++F + + KP+ I+++A+LS C H G
Sbjct: 580 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 639
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G+ YF++MK + I P +E + CM+DLLGRAG+L EA+ L+ MP + A +WG+L
Sbjct: 640 LVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGAL 699
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A I+G+ EL E A +H+ +L+ +SG+Y +++ IYA G+ ++S +IRK+MRD G+K
Sbjct: 700 LSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIK 759
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PG S++EV +VH F A D SHP
Sbjct: 760 KNPGYSWMEVDNKVHVFKADDVSHP 784
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+AGY K +++A LF+ M E++V+SW +++ +Q + EA+ + MQ + V+
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAKSG +A
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKG 346
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ +++ + WT +I+G +G E++++F++M + ++ ++S CC
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LGR+ ++ I+ + +I + + LQ AE + R M E + W S++
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 464
Query: 252 AASNIYGDV 260
A + G+V
Sbjct: 465 TAYSQVGNV 473
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N M+ GYAK+G L++A LF M ++V SW TL++GY Q Q ++ F M +
Sbjct: 95 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 154
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------ 125
P+ + A+ +C LG L + ++++ + AL+DM+ + G
Sbjct: 155 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 214
Query: 126 -------------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ AL++F++M + V++W M++ L+ G REA
Sbjct: 215 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 274
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
LDM M+ V+ + T+ + L+AC + + G++ + ++++ I+P + ++
Sbjct: 275 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS--ALV 332
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+L ++G +EA+ + + N A W L++ YG
Sbjct: 333 ELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYG 370
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK G A+ +F + ++N ++WT LI+G+ Q E++ LF +M+ E +
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D+ A+ +S C + LG +H+ + G V ++N+LI MYAK + A +
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K +++WT+MI + G +A + F M + N IT+ A+L A G
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAE 504
Query: 193 ELGRRYFNIMKSRYGIEPKIEQY 215
E G R + +M S + P Y
Sbjct: 505 EDGLRMYKVMLSEEYVRPDWVTY 527
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
V +N +++ YAK G++ A+++F M + V +W T+++G +L+ F M R
Sbjct: 91 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150
Query: 170 ARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ PN T + +C +G L + +++ ++ + E ++D+ R G +
Sbjct: 151 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ-KFDSQDDSEVAAALVDMFVRCGAV 209
Query: 229 QEAEKLLRRM 238
A +L R+
Sbjct: 210 DLASRLFVRI 219
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 213/350 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K ++ A +F+ + K ++SW +I GYAQ NEA+ F MQ N+K
Sbjct: 271 NSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIK 330
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + A A+L +WIH + + L+ V + AL+DMYAK G I A ++
Sbjct: 331 PDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKL 390
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + VITW MI G HGLG+ ++++F M++ +KPN+ITF+ LSAC H GLV
Sbjct: 391 FDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLV 450
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G +F MK YGIEP ++ YG M+DLLGRAG L +A +++MP + ++G++L
Sbjct: 451 EEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLG 510
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +V+LGE A + KL P + G + +L+NIYA W + K+R +M G++K
Sbjct: 511 ACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKT 570
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PGCS +E+ VH F +G TSHP ++Y L + +++ A ++ + S
Sbjct: 571 PGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNS 620
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 142/254 (55%), Gaps = 5/254 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y+K G ++ AR +F+ M + V+SW ++I GY Q A+ +F++M E V+P
Sbjct: 172 LVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPT 231
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ ++ AL ACA LG +E G+++H ++Q L++ V + N+LI MY+K ++ A +F+
Sbjct: 232 NVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFK 291
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
N++NK++++W MI G A +G EAL+ F M+ +KP+ T ++++ A + +
Sbjct: 292 NLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQ 351
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
+ ++ R+ ++ + ++D+ + G + A KL M + W +++
Sbjct: 352 AKWIHGLVIRRF-LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDG- 408
Query: 255 NIYGDVELGECALQ 268
YG LG+ +++
Sbjct: 409 --YGTHGLGKTSVE 420
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 103/178 (57%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK +N+A +F+ M E++++ W T+I+GYAQ A+ L RM E +PD I +
Sbjct: 75 YAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITI 134
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L A A + +G +H Y+ + G ++V ++ AL+DMY+K G + A +F+ M +
Sbjct: 135 VSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDH 194
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
++V++W +MI G G A+ +F +M V+P +T + L AC +G +E G+
Sbjct: 195 RTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK 252
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 46 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 105
++ GYA+ + A++ F RM+ ++V+P L C ++ G+ IH + G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 106 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 165
+ + +++MYAK +I A +F+ M + ++ W TMI+G A +G + AL +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 166 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
RM +P+ IT ++IL A L+ +G + R G E + ++D+ +
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVL-RAGFESLVNVSTALVDMYSKC 179
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHN 277
G + A + M + W S++ GD E Q ++ ++P N
Sbjct: 180 GSVSIARVIFDGMDHRTVVS-WNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTN 232
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 224/351 (63%), Gaps = 8/351 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN ++ GYAK DL AR +F M +++V+SW+ +I G + + EA+ +F M+
Sbjct: 132 WNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAVFEMMEATAA 191
Query: 69 --ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
+ V+ +++ M++ L ACA LG + G +H Y+E++G + L +L+DMYAK G I
Sbjct: 192 RHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLATSLVDMYAKCGAI 251
Query: 127 GKALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+AL+VF + +S V+ W +I GLA+HG+ RE+L MF +ME A V P+EIT++ +LS
Sbjct: 252 VEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVPDEITYLCLLS 311
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H GLV+ R+F ++++ + P +E Y C++D+LGRAG L+EA +++ MP + +
Sbjct: 312 ACVHGGLVDEAWRFFRSLEAQR-LRPHVEHYACLVDVLGRAGRLEEAYGVVKSMPMKPSV 370
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
++ G+LL A +I+G VELGE + L+ L+P + G Y LSNIYA+ RW E+ K RKVM
Sbjct: 371 SVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARRWQEAKKARKVM 430
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
+ GVKK+PG S I+V + + F+A D +HP +Y +L I MK E
Sbjct: 431 EERGVKKVPGFSEIDVGRGLCRFIAQDKTHPGSAEIYALLKLIAMDMKMKE 481
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 112 LNNALIDM-------------------------------YAKSGKIGKALQVFENMKNKS 140
++N+L+ M YAK + A +VF M +
Sbjct: 100 VSNSLVHMYAACALPGLARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRD 159
Query: 141 VITWTTMIAGLALHGLGREALDMFSRME--RAR---VKPNEITFIAILSACCHVGLVELG 195
V++W+ MI G G REAL +F ME AR V+ N++T +++L AC H+G + G
Sbjct: 160 VVSWSAMIDGCVKCGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRG 219
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAAS 254
R+ ++ +G I ++D+ + G + EA ++ +P E+ + IW +++
Sbjct: 220 RKMHRYLEE-HGFPLNIRLATSLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGL 278
Query: 255 NIYG 258
++G
Sbjct: 279 AVHG 282
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 222/348 (63%), Gaps = 5/348 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M+ GYA +GD++ AR LF++ T K+ W +I+GY Q + E + +FR MQ+ V
Sbjct: 174 WTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEV 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE ++ LSACA +GA++ G WIH Y+ + GL + ++ LIDMYAK G + A
Sbjct: 234 EPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKY 293
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M + + W MI+G+A+ G G A+ +F ME+A +KP+ ITFIA+ AC + G+
Sbjct: 294 LFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGM 353
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN----AAIW 247
V+ G R +N M + + IEPK E YGC+IDLL R G +EAE +++R+P A+ A W
Sbjct: 354 VDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAW 413
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+ L+A +G + E A + L +LE H SG Y +LSN+YA LG+ ++ ++R +M+
Sbjct: 414 RAFLSACCKHGQTQQAEVAAERLFQLERH-SGAYVLLSNMYAALGKHEDAKRVRNMMKLK 472
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
GV+K+PGCS I+V+ V+EF+AG+ +H D ++ +L ++N Q+ A+
Sbjct: 473 GVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNKQIVEAD 520
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F LSRLL ++ G L++A LF+ + + + T+I + AI
Sbjct: 38 FVLSRLLN------FCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIA 91
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+F + + PD + L A A++ + LGE IH + G + N+L+ MY
Sbjct: 92 VFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYR 151
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------------------- 155
+ A QVF+ M S ++WT MI G A G
Sbjct: 152 SFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISG 211
Query: 156 -----LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYG 207
+E L MF M+ V+P+E + ILSAC H+G ++ G RY R G
Sbjct: 212 YVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYL----GRLG 267
Query: 208 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 267
+ + +ID+ + G+L A+ L M N W ++++ + GD GE A+
Sbjct: 268 LPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVC-WNAMISGMAMDGD---GEGAI 323
Query: 268 QHLIKLE 274
+ +++E
Sbjct: 324 KLFMEME 330
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 208/343 (60%), Gaps = 4/343 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WNTMV Y + D+ A LF M ++V+SW T+IAGY + + EA+ LFR+M +
Sbjct: 185 WNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSS 244
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V P+ M LSACA G +E G W+H YI++ +N L+ LIDMYAK G I K
Sbjct: 245 CTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDK 304
Query: 129 ALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
ALQVFE K + +WTT+I GLA+HG + L MFS M+ + + P+++TF+ +L+AC
Sbjct: 305 ALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACA 364
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV+ G +F M+ +Y I PKIE YGCMIDLLGR G L EA ++++ MP + N IW
Sbjct: 365 HGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIW 424
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
G+ L+A ++ VELGE A + +L+P + ++S++YA W+ + R+ M +
Sbjct: 425 GAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSL 484
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 350
+KK PGCS + + VHEFVAG HP + +L + Q
Sbjct: 485 QMKKTPGCSSVALDGEVHEFVAGGNQHPLCAEICSVLETVEAQ 527
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y +G +AR LF+ M +++++ T + +A Q +A+ LF+ M +
Sbjct: 50 TALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFM 109
Query: 73 PDEIAMLAALSACAQLGAVEL----GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
PD +A+ L+AC G+ G +H +I G+ V ++ LI +Y + G++
Sbjct: 110 PDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTV 169
Query: 129 ALQVFENMKNKSVITWTTM-------------------------------IAGLALHGLG 157
A +VF++M KS I W TM IAG L G
Sbjct: 170 ARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRC 229
Query: 158 REALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIE 213
+EAL +F +M V PN T +LSAC G +E G + I K++ ++
Sbjct: 230 KEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLD 289
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ C+ID+ + G + +A ++ + P + + W +++ ++G
Sbjct: 290 R--CLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHG 332
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 9/222 (4%)
Query: 97 IHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
IH + + GL + L AL+ Y G+ G A +F+ M N+S++ T M A+ G
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSG 91
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKI 212
+ALD+F M P+ + +L+AC G R R + GIEP +
Sbjct: 92 QAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDV 151
Query: 213 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
+I + G G + A ++ MP ++ A W +++ D+ E A + +
Sbjct: 152 FVSTELIRVYGERGEMTVARRVFDSMPTKSTIA-WNTMVHQYVRNKDI---EAAYRLFLA 207
Query: 273 LEPHNSGNYAILSNIYAILGRWNES-GKIRKVMRDMGVKKMP 313
+ + ++ + Y ++GR E+ G R+++ P
Sbjct: 208 MPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHP 249
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 212/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G + A+ L + + + ++SW ++I+G++ Q EA F M VK
Sbjct: 493 STVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVK 552
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L +
Sbjct: 553 PDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLM 612
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + ++W MI G ALHG G EAL+MF RM+RA V PN TF+A+L AC HVGL+
Sbjct: 613 FEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLL 672
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +YF++M SRY + P++E + CM+D+LGR+ QEA + +R MP EA+A +W +LL+
Sbjct: 673 DDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A ++++L+P ++ Y +LSN+YA G+W + + R++MR ++K
Sbjct: 733 ICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKE 792
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +H F+ GD HP +Y++L + G+MK +
Sbjct: 793 PGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLS 834
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y GD + A +LF M + +V+SW TLI+GY Q ++ L M V
Sbjct: 88 WNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGV 147
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + L +C L + LG IH + GL T V +AL+DMY K + AL+
Sbjct: 148 ALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALR 207
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W IAG + +++F +M+R + ++ + + +C +
Sbjct: 208 FFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPC 267
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ R+ + + +K+ + + + ++D+ +AG L +A + +P
Sbjct: 268 LSTARQLHAHAIKNVFSSDRVVGT--AIVDVYAKAGNLVDARRAFIGLP 314
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L A +F+ M +++ +SW +IA Q + + I M ++
Sbjct: 392 NAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGME 451
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + L ACA L ++E G +H + GL +++ ++DMY K G I +A ++
Sbjct: 452 PDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKL 511
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
+ + + +++W ++I+G +L EA FS M VKP+ T+ +L C ++ +
Sbjct: 512 HDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATI 571
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL---RRMPFEA-NAAIW 247
ELG++ + I+K + I ++D+ + G + ++ + R++ F + NA I
Sbjct: 572 ELGKQIHGQIIKQEMLGDEYISST--LVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMIC 629
Query: 248 GSLL 251
G L
Sbjct: 630 GYAL 633
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K L++A F M E+N +SW IAG Q +Q + LF +MQ +
Sbjct: 190 SALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLG 249
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ A +A +CA + + +H + + ++ + A++D+YAK+G + A +
Sbjct: 250 VSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRA 309
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +V T M+ GL GLG EA+ +F M R+ V + I+ + SAC V
Sbjct: 310 FIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEV--- 366
Query: 193 ELGRRYF-----NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ YF + + + G + + ++DL G+ L EA + + M + ++ W
Sbjct: 367 ---KGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSW 422
Query: 248 GSLLAA 253
+++AA
Sbjct: 423 NAIIAA 428
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G+L +AR F + NV + ++ G + EA+ LF+ M V D I++
Sbjct: 297 YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
SACA++ G +H + G + V + NA++D+Y K + +A VF+ M+
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-R 197
+ ++W +IA L + + + + M R+ ++P++ T+ ++L AC + +E G
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ +KS G++ + ++D+ + G + EA+KL R+
Sbjct: 477 HGKAIKSGLGLDAFVSST--VVDMYCKCGAITEAQKLHDRI 515
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 33/205 (16%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L L A A A+ G+ H + G ++N L+ MYA+ G A VF+ M +
Sbjct: 23 LYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPH 82
Query: 139 K-------------------------------SVITWTTMIAGLALHGLGREALDMFSRM 167
+ V++W T+I+G HG+ R ++ + M
Sbjct: 83 RDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEM 142
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
R V + T +L +C + + LG + + + + G+E + ++D+ G+
Sbjct: 143 SRRGVALDRTTLAVLLKSCGGLDDLALGVQ-IHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLA 252
L +A + M E N+ WG+ +A
Sbjct: 202 LDDALRFFHGMG-ERNSVSWGAAIA 225
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 1 MFTLSRLL-YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
MF +R L + WN M+ GYA G Q EA
Sbjct: 612 MFEKARKLDFVSWNAMICGYALHG-------------------------------QGLEA 640
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALID 118
+ +F RMQ NV P+ +A L AC+ +G ++ G ++ H +Y L + ++D
Sbjct: 641 LEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVD 700
Query: 119 MYAKSGKIGKALQVFENMK-NKSVITWTTMIA 149
+ +S +AL+ +M + W T+++
Sbjct: 701 ILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L++A +FE + ++I+ T++I +Q D AI LF M + ++
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + + NAL+ YAK G I A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + V++W+ MI GLA HG G+ AL++F RM + PN IT ++L AC H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +RYFN MK +GI+ E Y CMIDLLGRAG L +A +L+ MPF+ANA+IWG+LL
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG+ A + L LEP SG + +L+N YA G WNE K+RK+M+D +KK
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKE 742
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S+IEV +VH F+ GD SHP +Y L ++ M A + N
Sbjct: 743 PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPN 789
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G +++AR +F E +E+N +SW L++ Y + DQ +AI +F M +
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P E ++AC +E G +H + + G + V NAL+DMY K G++ A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M + V++W +I+G L+G A+++ +M+ + + PN T +IL AC G
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+LGR+ M G ++D+ + +L +A K+ M
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM 364
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K+G ++ A +FE M + +V+SW LI+G + AI L +M+ +
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L AC+ GA +LG IH ++ + ++ + L+DMYAK+ + A +V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ M ++ +I +I+G + G EAL +F + + + N T A+L +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
L F N +++ Y+K AR +F+ + + +SW++L+ Y+ P AI F M+
Sbjct: 36 LASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMR 95
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
E V +E A+ L LG +H G + V + NAL+ MY G +
Sbjct: 96 AEGVCCNEFALPVVLKCVPD---ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMD 152
Query: 128 KALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A +VF E ++ ++W +++ + +A+ +F M + ++P E F +++AC
Sbjct: 153 DARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC 212
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+E GR+ + M R G + + ++D+ + G + A + +MP +++
Sbjct: 213 TGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVS 270
Query: 247 WGSLLAASNIYG 258
W +L++ + G
Sbjct: 271 WNALISGCVLNG 282
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK L++AR +F+ M +++I LI+G + + +EA++LF ++ E + +
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ A L + A L A +H + G + N LID Y K + A +VFE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +I T+MI L+ G A+ +F M R ++P+ ++L+AC + E
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ + R + ++ + G +++AE +P E W +++
Sbjct: 524 GKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGL 581
Query: 255 NIYG 258
+G
Sbjct: 582 AQHG 585
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G +H + + G ++ N LI Y+K + A +VF+ + + ++W++++ +
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GL R A+ F M V NE +L V LG + + M G +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQ-VHAMAMATGFGSDVF 136
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G G++ +A ++ E NA W L++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 205/324 (63%), Gaps = 1/324 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y + G ++ A LF+ M + ++ISWT +I G+ + EA+ FR MQ+ V
Sbjct: 89 WNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKKGFHEEALVWFREMQISGV 148
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD +A++AAL+AC LGA+ G W+H Y+ V +NN+LID+Y + G + A +
Sbjct: 149 KPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNVRVNNSLIDLYCRCGCVEFARE 208
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+ P+ +TF L+AC HVGL
Sbjct: 209 VFDKMEKRTVVSWNSVIVGSAANGNAHESLVYFRKMQEEGFNPDAVTFTGALTACSHVGL 268
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +YF MK Y I P+IE YGC++DL RAG L++A KL++ M + N + GSLL
Sbjct: 269 VEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLEDALKLVQSMSMKPNEVVIGSLL 328
Query: 252 AASNIYG-DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G + EL E ++HL ++ NY ILSN+YA G+W + K+R+ M+ +G+K
Sbjct: 329 AACRTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMYAADGKWEGAXKMRRKMKGLGLK 388
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSH 334
K PG S IE+ H F+AGD++H
Sbjct: 389 KQPGFSSIEIDDHTHVFMAGDSAH 412
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 66 MQVENVKPDEIAMLAALSACAQL--GAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAK 122
M++ +P+ I +A +S C G+ LG+ +H Y + GL+ T V + A++ MY+K
Sbjct: 8 MRLAGFEPNHITFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSK 67
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIA-------------------------------GL 151
+ GKA VF+ M++K+ +TW TMI G
Sbjct: 68 RCRFGKARCVFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGF 127
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 211
G EAL F M+ + VKP+ + IA L+AC ++G + G + S+ +
Sbjct: 128 VKKGFHEEALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQ-DFKNN 186
Query: 212 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ +IDL R G ++ A ++ +M + W S++ S G+
Sbjct: 187 VRVNNSLIDLYCRCGCVEFAREVFDKME-KRTVVSWNSVIVGSAANGN 233
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 207/334 (61%), Gaps = 2/334 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV G K+G ++AR LF+ M E+N++SW +++GY + + +A+ +F M+ V
Sbjct: 168 WTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGV 227
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A+ AC GA+ G +H ++EQ G+ L A++DMY K G + +A +
Sbjct: 228 DGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWR 287
Query: 132 VFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VFE + K + TW MI G A+HG G +AL +F RMER V P+++T + +L+AC H
Sbjct: 288 VFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHA 347
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G++ GR YFN + RYGIEPK+E YGCM+DL GRAG L+EA+K+++ MP E + + G+
Sbjct: 348 GMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGA 407
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
L AS I+GDV+LGE +I+L+P NSG Y +L+N+ A GRW + ++R++M + V
Sbjct: 408 LFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNV 467
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 343
K G S IEV V EF G HP + +Y +
Sbjct: 468 SKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAM 501
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 206/302 (68%), Gaps = 2/302 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK GD+ AR LF+ + E++V+SW +I+GY + A+ LF +MQ
Sbjct: 182 WNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G +++G+ +H+ + + + N V L NALIDMYAK G + A
Sbjct: 242 KPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF +M++K V TW +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ GR +FN+M+ +Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A ++G++EL + A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 310 KK 311
K
Sbjct: 482 NK 483
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 72/307 (23%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAM 78
G + +A +F+ + + + TLI G A P +A++L+ RM V+PD++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC +GA + G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 139 KSVITWTTMIAGLALHG----------------------------------LGREALD-- 162
+ + W+ MI G A G L RE D
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 163 --------------------------MFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+F +M+R KP+ +T +++LSAC G +++G+
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 265
Query: 197 RY---FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
R + M SR G + +ID+ + G ++ A ++ M + + + W S++
Sbjct: 266 RLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSMKSAHEVFWSMR-DKDVSTWNSIVGG 322
Query: 254 SNIYGDV 260
++G V
Sbjct: 323 LALHGHV 329
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
MF+ + N ++ YAK G + +A +F M +K+V +W +++ G A E+I
Sbjct: 274 MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESI 333
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDM 119
+F +M V+PDEI +A L AC+ G V+ G N ++ +Y + + ++DM
Sbjct: 334 DMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDM 393
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A + + MK + + W T+++ +HG
Sbjct: 394 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----ERARVKPNE 176
A G I A VF+ + + T+I G A R+A+ +++RM V+P++
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 177 ITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF +L AC +G + G + + +++K+ G E +I + G L A L
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKA--GCESDAFVKNALIGMHASCGNLGIAAALF 140
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVE-----LGECALQHLI 271
E +A W +++ GD+ EC ++ L+
Sbjct: 141 DGRARE-DAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 216/349 (61%), Gaps = 5/349 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM++ YA+VG ++ A +FE M E++++SW +LIAG+ Q +A+ F M E
Sbjct: 353 WNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGK 412
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+++ LS+CA + A+++G +H + + G + +NNALI MYAK G+I +A
Sbjct: 413 KPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGL 472
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + + VI+W ++I G A++G G+EAL +F M + P+E+TFI ILSAC H G+
Sbjct: 473 VFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGM 532
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G + F M Y IEP E Y CM+DLLGR G L EA +++R M +A A +WG+LL
Sbjct: 533 VDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALL 592
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A +G++ELG A L + EPH + NY +LSNI+A RWNE ++R +M K
Sbjct: 593 GACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVK 652
Query: 312 MPGCSYIEVSKRVHEFVAGDT--SHPDFDRLYQILCKINGQMKFAEHLQ 358
PGCS++EV +VH F++ D+ S PD + L +N ++ A H+
Sbjct: 653 EPGCSWVEVRNQVHGFLSDDSTRSRPD---IGVTLASLNSHIRNAFHIS 698
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 155/313 (49%), Gaps = 20/313 (6%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N+M++ YAK G +N AR LF+ M +N++SW T+++GY + +EA LF M
Sbjct: 9 YNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP---- 64
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D + ++ + G VE + + + V NA+I Y K G++ +A +
Sbjct: 65 RRDLFSWTLMITCYTRNGEVEKARELFDSL-PCSYRKGVACWNAMISGYVKKGRVNEAKR 123
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K++I+W +M+AG + R L+ F+ M+ V +++ ++ VG
Sbjct: 124 LFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDV----VSWNLMVDGFIQVGD 179
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ ++F + +P + + M+ R G + E+ +L +MP N W +++
Sbjct: 180 LDSAWKFFQETQ-----KPNVVSWVTMLSGFARNGNILESRRLFDQMP-SRNIVSWNAMI 233
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM--RDMGV 309
+A E+ E A + ++ +S ++ + N Y +G+ +E+ ++ M R++G
Sbjct: 234 SA--YVQRCEIDE-ASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGA 290
Query: 310 KKMPGCSYIEVSK 322
+ YI+ +K
Sbjct: 291 QTAMISGYIQCNK 303
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/307 (45%), Positives = 202/307 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ +V + + G+L AR +F+ M E++V+SWT +++GYAQ + EA+ LFR M+ V
Sbjct: 414 WSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGV 473
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+AM+ +SAC LG +E G +H YI++ G +V L NALIDMYAK G + A Q
Sbjct: 474 RPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQ 533
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF+A+L+A H G
Sbjct: 534 VFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGW 593
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M N +WG+LL
Sbjct: 594 VDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALL 653
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ ++R+ M G KK
Sbjct: 654 AACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKK 713
Query: 312 MPGCSYI 318
GCS++
Sbjct: 714 TLGCSWV 720
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 43/283 (15%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
A + G L+ A LF + + N + TLI GY++ P++++ LF +M+ V PD
Sbjct: 283 AAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGF 342
Query: 77 AMLAALSACAQ----LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
L ++ L + + IH + + G + + NALI +YA
Sbjct: 343 TFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQV 402
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
++G++ A QVF+ M + V++WT M++G A REAL
Sbjct: 403 FNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREAL 462
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCM 218
++F M V+P+E+ + ++SAC +G +E G RY + G + +
Sbjct: 463 ELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYID----ENGFGWMVSLCNAL 518
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
ID+ + G + A ++ M + W S+++A +G+ E
Sbjct: 519 IDMYAKCGCMDLAWQVFNNME-RKSLITWNSMISACANHGNAE 560
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 140/335 (41%), Gaps = 49/335 (14%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNV----ISWTTLIAGYAQM--DQP-------- 56
F+NT++ GY+K + + LF M V ++T L+ G ++M D P
Sbjct: 154 FYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEI 213
Query: 57 ---------NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 107
+ + + +V ++ P ++ + AC + A++L IH + L+
Sbjct: 214 HGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKL---IHARAFRANLH 270
Query: 108 TIVPLNNALI-------DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
N+AL+ + +G + A ++F + + + T+I G + ++
Sbjct: 271 -----NHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQS 325
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVG-----LVELGRRYFNIMKSRYGIEPKIEQY 215
+ +F++M R V P+ TF +L + +V + ++K G +
Sbjct: 326 VQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLK--LGFCFHLFVM 383
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 275
+I L G A ++ M A+ W L+ A G++EL A Q ++
Sbjct: 384 NALIHLYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELEL---ARQVFDEMPE 439
Query: 276 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ ++ ++ + YA R E+ ++ + MRD+GV+
Sbjct: 440 RDVVSWTVMVSGYAQAKRSREALELFREMRDVGVR 474
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 221/342 (64%), Gaps = 6/342 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
WN M++ Y +VG L+ AR LF+ M +++V+SW ++IAGYAQ + +I LF+ M +
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PDE+ + + LSAC +GA++L W+ + + + + + N+LI MY+K G + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + V+++ T+I+G A +G G+EA+ + ME ++P+ +T+I +L+AC H G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ G+ F +++ P ++ Y CM+DLLGRAG L EA+ L++ MP + +A ++GSL
Sbjct: 508 LLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L AS I+ V LGE A L +LEP N GNY +LSNIYA GRW + ++R++M+ G+K
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++E +VH+F GD SH +Y++L ++ +MK
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 139/260 (53%), Gaps = 34/260 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV GYAK+GDL +AR F+ M E++V+SW + + YAQ + P EA+ LF +M E +
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------- 124
PD+ + +S+C+ +G L + I I+Q + + AL+DM+AK G
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314
Query: 125 ----------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
++GK A ++F+NM + V++W +MIAG A +G
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374
Query: 160 ALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
++++F M ++P+E+T ++LSAC H+G ++L +I++ + I+ I + +
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSL 433
Query: 219 IDLLGRAGYLQEAEKLLRRM 238
I + + G + +A ++ + M
Sbjct: 434 IFMYSKCGSVADAHRIFQTM 453
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 30 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 89
++F + ++ ++ Y++M N+ ++LF+ N++P + + + G
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSG 114
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 149
+ H Y+ + G + NA++DMYAK+G++ A +FE M +++ W +MI+
Sbjct: 115 NL-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G G EA+ +F+ M AR N IT+ ++++ +G +E RRYF+ M R
Sbjct: 170 GCWKSGNETEAVVLFNMMP-AR---NIITWTSMVTGYAKMGDLESARRYFDEMPER---- 221
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECA 266
+ + M + +EA L +M E + W +++ + GD L +
Sbjct: 222 -SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280
Query: 267 L-----QHLI--------KLEPHNS-GNYAILSNIYAILG 292
L +H++ L+ H GN I NI+ LG
Sbjct: 281 LRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELG 320
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 210/341 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +++GY G + A+ +F+ M EKN++SW +I+G A+ E + LF M+ E
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P + A A+ +CA LGA G+ H + + G ++ + NALI MYAK G + +A Q
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQ 473
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++W +IA L HG G EA+D++ M + ++P+ ITF+ +L+AC H GL
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGL 533
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YFN M++ Y I P + Y +IDLL R+G EAE ++ +PF+ A IW +LL
Sbjct: 534 VDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALL 593
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ ++G++ELG A L L P + G Y +LSN+YA G+W E ++RK+MRD GVKK
Sbjct: 594 SGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKK 653
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
CS+IE+ +VH F+ DTSHP+ + +Y+ L + +M+
Sbjct: 654 EVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMR 694
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 33/278 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W TM+ GY K G + + L + M E ++++ +I+GY EA+ + RRM
Sbjct: 222 WTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSG 281
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYI---EQYGL---NTIVPLN----------- 113
++ DE + + ACA ++LG+ +H Y+ E + N++V L
Sbjct: 282 IELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARA 341
Query: 114 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
NAL+ Y SG IG+A +F+ MK K++++W MI+GLA +G G E
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
L +FS M+R +P + F + +C +G G++ F+ + G + + +I
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-FHAQLVKIGFDSSLSAGNALIT 460
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G ++EA+++ R MP ++ W +L+AA +G
Sbjct: 461 MYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQHG 497
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 60/289 (20%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
TMV+GY GD+ AR++FE ++ ++ + + +I G++ + AI LF +M+ E
Sbjct: 84 TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 71 VKPDEIAMLAALSA----------CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
KPD+ + L+ C Q A L + G + ++NAL+ +Y
Sbjct: 144 FKPDDFTYASVLAGLALVVDDEKQCVQFHAAAL---------KSGAGYVTSVSNALVSVY 194
Query: 121 AKSGK----IGKALQVFENMKNKSVITWTT------------------------------ 146
++ + A +VF+++ K +WTT
Sbjct: 195 SRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAY 254
Query: 147 --MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
MI+G GL +EAL+M RM + ++ +E T+ +++ AC + L++LG++ +
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR 314
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
R + ++ L + G EA + +MP + + W +LL+
Sbjct: 315 REDFSFHFDN--SLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 57/290 (19%)
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 149
+++L +H I +G + N LID+Y KS ++ A Q+F+ + I TTM++
Sbjct: 29 SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 150 GLALHG---------------------------------LGREALDMFSRMERARVKPNE 176
G G G A+++F +M+ KP++
Sbjct: 89 GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148
Query: 177 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG----YLQEAE 232
T+ ++L+ V E F+ + G ++ + R L A
Sbjct: 149 FTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSAR 208
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL---IKLEPHNSGNYAILSNIYA 289
K+ +P E + W +++ G +LG+ L+ + +KL +N A++S Y
Sbjct: 209 KVFDDIP-EKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYN----AMISG-YV 262
Query: 290 ILGRWNESGKIRKVMRDMG-----------VKKMPGCSYIEVSKRVHEFV 328
G + E+ ++ + M G ++ +++ K+VH +V
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYV 312
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 210/335 (62%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K+G L+ A LFE M ++++SW +++ + + + LF M+
Sbjct: 200 KVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRA 259
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD+ M+A L AC G E IH YI + G N + + AL+++YAK G++ +
Sbjct: 260 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 319
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+FE +K++ I WT M+AG A+H GREA+ +F M + V+ + +TF +LSAC H
Sbjct: 320 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 379
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G++YF IM Y +EP+++ Y CM+DLLGR+G L++A +L++ MP E ++ +WG+
Sbjct: 380 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 439
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +YG+VELG+ + L+ L+P + NY +LSNIY+ G W ++ K+R +M++ +
Sbjct: 440 LLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ PGCS+IE ++H FV GD HP D ++ L
Sbjct: 500 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKL 534
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 157/308 (50%), Gaps = 28/308 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V+ Y K+G +A+ LF+ M K+++SW +L++G + + F RM+ E+ +
Sbjct: 101 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 160
Query: 73 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ +L+ +SACA +GA++ G+ +H + + G++ + N+LI+MY K G + A Q
Sbjct: 161 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 220
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M +S+++W +M+ +G + +D+F+ M+RA + P++ T +A+L AC G
Sbjct: 221 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG- 279
Query: 192 VELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LGR+ +I R G I +++L + G L +E + + + + W +
Sbjct: 280 --LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTA 336
Query: 250 LLAASNIYG---------------DVELGECALQHLIKLEPHN------SGNYAILSNIY 288
+LA ++ VE+ HL+ H+ + I+S +Y
Sbjct: 337 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 396
Query: 289 AILGRWNE 296
+ R +
Sbjct: 397 RVEPRLDH 404
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ER 169
+ + L+ MY K G A ++F+ M NK +++W ++++GL+ G L+ F RM E
Sbjct: 99 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 158
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
R +PNE+T ++++SAC +G ++ G+ ++ + G+ K + +I++ G+ G+L
Sbjct: 159 GR-QPNEVTLLSVVSACADMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLD 216
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
A +L MP + + W S++ N G E G
Sbjct: 217 AASQLFEEMPVRSLVS-WNSMVVIHNHNGYAEKG 249
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 224/340 (65%), Gaps = 12/340 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VE-- 69
NT++ Y+++G ++ A +F M ++++++W T+I GY + +A+ L +MQ +E
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 70 --------NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
++KP+ I ++ L +CA L A+ G+ IH Y + L T V + +AL+DMYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G + + +VF+ + K+VITW +I +HG G+EA+D+ M VKPNE+TFI+
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+ +AC H G+V+ G R F +MK YG+EP + Y C++DLLGRAG ++EA +L+ MP +
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 242 AN-AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
N A W SLL AS I+ ++E+GE A Q+LI+LEP+ + +Y +L+NIY+ G W+++ ++
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
R+ M++ GV+K PGCS+IE VH+FVAGD+SHP ++L
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
+ +V Y + + R +F+ M ++ + W +IAGY+Q + EA+ LF M+ +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ M + AC + GA E IH ++ + GL+ + N L+DMY++ GKI A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-----------RARVKPNEITFI 180
+F M+++ ++TW TMI G +AL + +M+ R +KPN IT +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
IL +C + + G+ + + + + ++D+ + G LQ + K+ ++P
Sbjct: 522 TILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 579
Query: 241 EANAAIWGSLLAASNIYGD 259
+ N W ++ A ++G+
Sbjct: 580 QKNVITWNVIIMAYGMHGN 598
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+VA Y K+G L +++ L +++++W T+++ Q +Q EA+ R M +E V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + + L AC+ L + G+ +H Y + G L+ + +AL+DMY ++ +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
VF+ M ++ + W MIAG + + +EAL +F ME A + N T ++ AC G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ R G++ ++D+ R G + A ++ +M + + W ++
Sbjct: 420 AFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTM 477
Query: 251 LAA 253
+
Sbjct: 478 ITG 480
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y K GD +F+ ++E+N +SW +LI+ ++ A+ FR M ENV+
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 73 PDEIAMLAALSACAQLGAVE---LGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGK 128
P +++ ++AC+ L E +G+ +H Y + G LN+ + N L+ MY K GK+
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLAS 254
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ + + + ++TW T+++ L + EAL+ M V+P+E T ++L AC H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 189 VGLVELGR 196
+ ++ G+
Sbjct: 315 LEMLRTGK 322
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W L+ + + EA+ + M V +KPD A A L A A L +ELG+ IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 103 QYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
++G V + N L+++Y K G G +VF+ + ++ ++W ++I+ L AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ F M V+P+ T +++++AC ++ + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 213/350 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K ++ A ++F + K V++W +I GYAQ NEA+ LF MQ ++K
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIK 442
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD +++ ++A A L +WIH + ++ V + ALID +AK G I A ++
Sbjct: 443 PDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKL 502
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M+ + VITW MI G +G GREALD+F+ M+ VKPNEITF+++++AC H GLV
Sbjct: 503 FDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLV 562
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF MK YG+EP ++ YG M+DLLGRAG L +A K ++ MP + + G++L
Sbjct: 563 EEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VELGE L L+P + G + +L+N+YA W++ ++R M G++K
Sbjct: 623 ACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKT 682
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PGCS +E+ VH F +G T+HP R+Y L + +MK A ++ + S
Sbjct: 683 PGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNS 732
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 174/345 (50%), Gaps = 52/345 (15%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ Y K G + +AR +F+ M+ +NV+SW T+I GYAQ + EA F +M E V+P
Sbjct: 284 MLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPT 343
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
++M+ AL ACA LG +E G ++H +++ + V + N+LI MY+K ++ A VF
Sbjct: 344 NVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFG 403
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV----- 189
N+K+K+V+TW MI G A +G EAL++F M+ +KP+ T +++++A +
Sbjct: 404 NLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQ 463
Query: 190 ------------------------------GLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
G ++ R+ F++M+ R+ I + MI
Sbjct: 464 AKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVI-----TWNAMI 518
Query: 220 DLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIK---L 273
D G G+ +EA L M + N + S++AA + G VE G + + + L
Sbjct: 519 DGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGL 578
Query: 274 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
EP +Y + ++ GR +++ K ++DM VK PG + +
Sbjct: 579 EP-TMDHYGAMVDLLGRAGRLDDAWKF---IQDMPVK--PGITVL 617
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 105/187 (56%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK + +A +FE M +++++SW T++AGYAQ A+ + +MQ KPD I +
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITL 246
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
++ L A A L A+ +G IH Y + G +V + A++D Y K G + A VF+ M +
Sbjct: 247 VSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSS 306
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++V++W TMI G A +G EA F +M V+P ++ + L AC ++G +E GR
Sbjct: 307 RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYV 366
Query: 199 FNIMKSR 205
++ +
Sbjct: 367 HRLLDEK 373
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F +++ + K + A +FE + K + + T++ GYA+ +A+ + RM+ +
Sbjct: 78 FQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDE 137
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V P L + + G IH + G + + A++++YAK +I A
Sbjct: 138 VMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAY 197
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++FE M + +++W T++AG A +G R A+ + +M+ A KP+ IT +++L A +
Sbjct: 198 KMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLK 257
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ +GR R G E + M+D + G ++ A + + M N W ++
Sbjct: 258 ALRIGRSIHG-YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS-SRNVVSWNTM 315
Query: 251 LAASNIYGDVE 261
+ G+ E
Sbjct: 316 IDGYAQNGESE 326
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 221/342 (64%), Gaps = 6/342 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 70
WN M++ Y +VG L+ AR LF+ M +++V+SW ++IAGYAQ + +I LF+ M +
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++PDE+ + + LSAC +GA++L W+ + + + + + N+LI MY+K G + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + V+++ T+I+G A +G G+EA+ + ME ++P+ +T+I +L+AC H G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ G+ F +++ P ++ Y CM+DLLGRAG L EA+ L++ MP + +A ++GSL
Sbjct: 508 LLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L AS I+ V LGE A L +LEP N GNY +LSNIYA GRW + ++R++M+ G+K
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
K G S++E +VH+F GD SH +Y++L ++ +MK
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 139/260 (53%), Gaps = 34/260 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W +MV GYAK+GDL +AR F+ M E++V+SW + + YAQ + P EA+ LF +M E +
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------- 124
PD+ + +S+C+ +G L + I I+Q + + AL+DM+AK G
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314
Query: 125 ----------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGRE 159
++GK A ++F+NM + V++W +MIAG A +G
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374
Query: 160 ALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
++++F M ++P+E+T ++LSAC H+G ++L +I++ + I+ I + +
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSL 433
Query: 219 IDLLGRAGYLQEAEKLLRRM 238
I + + G + +A ++ + M
Sbjct: 434 IFMYSKCGSVADAHRIFQTM 453
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 30 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 89
++F + ++ ++ Y++M N+ ++LF+ N++P + + + G
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSG 114
Query: 90 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 149
+ H Y+ + G + NA++DMYAK+G++ A +FE M +++ W +MI+
Sbjct: 115 NM-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 150 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 209
G G EA+ +F+ M AR N IT+ ++++ +G +E RRYF+ M R
Sbjct: 170 GCWKSGNETEAVVLFNMMP-AR---NIITWTSMVTGYAKMGDLESARRYFDEMPER---- 221
Query: 210 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECA 266
+ + M + +EA L +M E + W +++ + GD L +
Sbjct: 222 -SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280
Query: 267 L-----QHLI--------KLEPHNS-GNYAILSNIYAILG 292
L +H++ L+ H GN I NI+ LG
Sbjct: 281 LRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELG 320
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 224/359 (62%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN- 70
++V+ YA GD ++AR +F+ M ++ I+W LI Y + + +A+ LF M+ EN
Sbjct: 164 TSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENG 223
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD++ + L AC LGA++ GE + Y +G + + N+LI MY K G + KA
Sbjct: 224 AEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAY 283
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
QVF KSV+TW+ MI+GLA +G G++A+ F M R+ V P+E TF +LSAC H G
Sbjct: 284 QVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSG 343
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA-EKLLRRMPFEANAAIWGS 249
LV+ G ++F+IM Y ++P + YGCM+DL+GRAG L +A E +++ M +A IW +
Sbjct: 344 LVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRT 403
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G ++LGE + HLI+L+ +G+Y +L N YA + W + ++RK+M++ G+
Sbjct: 404 LLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWGKVAEVRKLMKEKGI 463
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ PGC+ +E++ +HEF+A D SHP +Y+ L +IN ++ A ++ N S + + D
Sbjct: 464 QTTPGCTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRIAGYVPNVSSELHDLD 522
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K G ++ A +F +K+V++W+ +I+G A +AI+ F M
Sbjct: 264 KVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRS 323
Query: 70 NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
V PDE LSAC+ G V+ G ++ +Y L V ++D+ ++G + +
Sbjct: 324 GVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQ 383
Query: 129 ALQ-VFENMKNKSVIT-WTTMIAGLALHG 155
A + V ++M+ T W T++ +HG
Sbjct: 384 AYELVVKDMRVAPDATIWRTLLGACRIHG 412
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H + G + L +L+ YA G A +VF+ M + I W +I +
Sbjct: 147 LHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRR 206
Query: 157 GREALDMFSRMERAR--VKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIE 213
++AL +F M +P+++T I +L AC +G ++ G + + + YG E K+
Sbjct: 207 TKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVR 266
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
+I + + G + +A ++ P + + W ++++ ASN +G
Sbjct: 267 N--SLITMYTKCGCVDKAYQVFCETP-KKSVVTWSAMISGLASNGFG 310
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 209/335 (62%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K+G L+ A LFE M ++++SW +++ + + + LF M+
Sbjct: 277 KVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRA 336
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD+ M+A L AC G E IH YI + G N + + AL+++YAK G++ +
Sbjct: 337 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 396
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+FE +K++ I WT M+AG A+H GREA+ +F M + V+ + +TF +LSAC H
Sbjct: 397 EDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 456
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G++YF IM Y +EP+++ Y CM+DLLGR+G L++A +L++ MP E ++ +WG+
Sbjct: 457 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 516
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +YG+VELG+ + L+ L+P + NY +LSNIY+ G W + K+R +M++ +
Sbjct: 517 LLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRL 576
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ PGCS+IE ++H FV GD HP D ++ L
Sbjct: 577 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKL 611
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 157/308 (50%), Gaps = 28/308 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V+ Y K+G +A+ LF+ M ++++SW +L++G + + F RM+ E+ +
Sbjct: 178 DRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237
Query: 73 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ +L+ +SACA +GA++ G+ +H + + G++ + N+LI+MY K G + A Q
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M +S+++W +M+ +G + +D+F+ M+RA + P++ T +A+L AC G
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG- 356
Query: 192 VELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LGR+ +I R G I +++L + G L +E + + + + W +
Sbjct: 357 --LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDTIAWTA 413
Query: 250 LLAASNIYG---------------DVELGECALQHLIKLEPHN------SGNYAILSNIY 288
+LA ++ VE+ HL+ H+ + I+S +Y
Sbjct: 414 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 473
Query: 289 AILGRWNE 296
+ R +
Sbjct: 474 RVEPRLDH 481
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ER 169
+ + L+ MY K G A ++F+ M N+ +++W ++++GL+ G L+ F RM E
Sbjct: 176 IGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 235
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
R +PNE+T ++++SAC +G ++ G+ ++ + G+ K + +I++ G+ G+L
Sbjct: 236 GR-QPNEVTLLSVVSACAXMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLD 293
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
A +L MP + + W S++ N G E G
Sbjct: 294 AASQLFEEMPVRSLVS-WNSMVVIHNHNGYAEKG 326
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 224/340 (65%), Gaps = 12/340 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VE-- 69
NT++ Y+++G ++ A +F M ++++++W T+I GY + +A+ L +MQ +E
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 70 --------NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
++KP+ I ++ L +CA L A+ G+ IH Y + L T V + +AL+DMYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G + + +VF+ + K+VITW +I +HG G+EA+D+ M VKPNE+TFI+
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+ +AC H G+V+ G R F +MK YG+EP + Y C++DLLGRAG ++EA +L+ MP +
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 242 AN-AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
N A W SLL AS I+ ++E+GE A Q+LI+LEP+ + +Y +L+NIY+ G W+++ ++
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
R+ M++ GV+K PGCS+IE VH+FVAGD+SHP ++L
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
+ +V Y + + R +F+ M ++ + W +IAGY+Q + EA+ LF M+ +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ M + AC + GA E IH ++ + GL+ + N L+DMY++ GKI A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-----------RARVKPNEITFI 180
+F M+++ ++TW TMI G +AL + +M+ R +KPN IT +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
IL +C + + G+ + + + + ++D+ + G LQ + K+ ++P
Sbjct: 522 TILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 579
Query: 241 EANAAIWGSLLAASNIYGD 259
+ N W ++ A ++G+
Sbjct: 580 QKNVITWNVIIMAYGMHGN 598
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+VA Y K+G L +++ L +++++W T+++ Q +Q EA+ R M +E V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + + L AC+ L + G+ +H Y + G L+ + +AL+DMY ++ +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
VF+ M ++ + W MIAG + + +EAL +F ME A + N T ++ AC G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ R G++ ++D+ R G + A ++ +M + + W ++
Sbjct: 420 AFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTM 477
Query: 251 LAA 253
+
Sbjct: 478 ITG 480
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y K GD +F+ ++E+N +SW +LI+ ++ A+ FR M ENV+
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 73 PDEIAMLAALSACAQLGAVE---LGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGK 128
P +++ ++AC+ L E +G+ +H Y + G LN+ + N L+ MY K GK+
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLAS 254
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ + + + ++TW T+++ L + EAL+ M V+P+E T ++L AC H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 189 VGLVELGR 196
+ ++ G+
Sbjct: 315 LEMLRTGK 322
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W L+ + + EA+ + M V +KPD A A L A A L +ELG+ IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 103 QYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
++G V + N L+++Y K G G +VF+ + ++ ++W ++I+ L AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ F M V+P+ T +++++AC ++ + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 210/350 (60%), Gaps = 6/350 (1%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T++ LL NT V D+ F M +K+++SW +I Y + P EA+ L
Sbjct: 244 TMASLLPAVSNTTTENVMYVKDM------FFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 297
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 122
+ M+ + +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK
Sbjct: 298 YSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 357
Query: 123 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 182
G + +A VFENMK++ V++WT MI+ G G +A+ +FS+M+ + + P+ I F+
Sbjct: 358 CGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTT 417
Query: 183 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 242
L+AC H GL+E GR F +M Y I P++E CM+DLLGRAG ++EA K ++ MP E
Sbjct: 418 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEP 477
Query: 243 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 302
N +WG+LL A ++ + ++G A L +L P SG Y +LSNIYA GRW E IR
Sbjct: 478 NERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 537
Query: 303 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
+M+ G+KK PG S +EV++ +H F+ GD SHP +Y+ L + +MK
Sbjct: 538 IMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMK 587
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 89/171 (52%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YA + D+ AR +F+ + E+NVI +I Y E I +F M +VKPD
Sbjct: 81 LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L AC+ G + +G+ IH + GL++ + + N L+ MY K G + +A V +
Sbjct: 141 HYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 200
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
M + V++W +++AG A + +AL++ ME ++ + T ++L A
Sbjct: 201 EMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 251
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 35/246 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ Y K G L+ AR + + M+ ++V+SW +L+AGYAQ + ++A+ + R M+ +
Sbjct: 180 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKIS 239
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D M + L A + NT + DM+ K GK
Sbjct: 240 HDAGTMASLLPAVS--------------------NTTTENVMYVKDMFFKMGK------- 272
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
KS+++W MI + + EA++++S ME +P+ ++ ++L AC +
Sbjct: 273 ------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSAL 326
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG++ ++ R + P + +ID+ + G L A + M + W ++++
Sbjct: 327 SLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLDRARDVFENMK-SRDVVSWTAMIS 384
Query: 253 ASNIYG 258
A G
Sbjct: 385 AYGFSG 390
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
+H+ I L L L+ YA + A +VF+ + ++VI MI +G
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
RE + +F M VKP+ TF +L AC G + +G++ ++ G+ +
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHG-SATKVGLSSTLFVGN 180
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLE 274
++ + G+ G+L EA +L M + W SL+A A N D L C +K+
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKIS 239
Query: 275 PHNSGNYAIL 284
H++G A L
Sbjct: 240 -HDAGTMASL 248
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 215/347 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK G++ ++ +FE M +++I+W T+IA + N + + RM+ E V
Sbjct: 455 NTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 514
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ML+ L C+ L A G+ IH I + GL + VP+ N LI+MY+K G + + QV
Sbjct: 515 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 574
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K V+TWT +I+ ++G G++A+ F ME A + P+ + F+AI+ AC H GLV
Sbjct: 575 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 634
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF+ MK Y IEP+IE Y C++DLL R+ L +AE + MP + +++IWG+LL+
Sbjct: 635 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 694
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + GD E+ E + +I+L P ++G Y ++SNIYA LG+W++ IRK ++ G+KK
Sbjct: 695 ACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 754
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++E+ +V+ F G F+ + ++L + G M ++ N
Sbjct: 755 PGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIAN 801
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 137/247 (55%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G+L ++ +F M K+ +SW ++I Y Q +EA+ LF+ M+ + VK
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 413
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + LS QLG + LG+ +H + + G N+ + ++N L+DMYAK G++G +L+V
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 473
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FENMK + +ITW T+IA L M SRM V P+ T ++IL C +
Sbjct: 474 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 533
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ + + G+E + +I++ + G L+ + ++ + M + + W +L++
Sbjct: 534 RQGKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALIS 591
Query: 253 ASNIYGD 259
A +YG+
Sbjct: 592 ACGMYGE 598
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 133/245 (54%), Gaps = 6/245 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + DL+ AR +FE M ++V+SW +LI+GY NEA+ ++ R + V
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M + L AC LG+VE G+ IH IE+ G+ V +NN L+ MY K + ++
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++W TMI G + GL E++ +F M + KP+ +T +IL AC H+G +
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDL 332
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ + M + G E +I++ + G L ++++ M + + + W S++
Sbjct: 333 EFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMI- 389
Query: 253 ASNIY 257
N+Y
Sbjct: 390 --NVY 392
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y K L + R +F+ M ++ +SW T+I GY+Q+ E+I LF M V K
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 313
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L AC LG +E G+++H+Y+ G +N LI+MYAK G + + +V
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK K ++W +MI +G EA+ +F +M + VKP+ +T++ +LS +G +
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 432
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG+ + ++ G I ++D+ + G + ++ K+ M + W +++A
Sbjct: 433 HLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIA 490
Query: 253 ASNIYGDVELG 263
+ D LG
Sbjct: 491 SCVHSEDCNLG 501
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 46/335 (13%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F ++A YA D ++ ++F L + NV W ++I +EA++L+ Q
Sbjct: 50 FSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRI 109
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD + ++ACA L E+ + IH+ + G + + + NALIDMY + + KA
Sbjct: 110 RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKA 169
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M + V++W ++I+G +G EAL+++ R V P+ T ++L AC +
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 229
Query: 190 GLVEL-----------------------------------GRRYFNIMKSRYGIEPKIEQ 214
G VE GRR F+ M R +
Sbjct: 230 GSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV-----S 284
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRM--PFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
+ MI + G +E+ KL M F+ + S+L A GD+E G+ ++I
Sbjct: 285 WNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 344
Query: 273 --LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
E + + IL N+YA G S ++ M+
Sbjct: 345 SGYECDTTAS-NILINMYAKCGNLLASQEVFSGMK 378
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 219/345 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
M+ G + A +F M ++ + WT +I G + + N + +FR MQV+ V+
Sbjct: 195 TVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVE 254
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E+ + LSACAQLGA+ELG WIH Y+ + G+ + ALI+MY++ G I +A +
Sbjct: 255 PNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQAL 314
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ ++ K V T+ +MI GLALHG EA+++FS M + RV+PN ITF+ +L+AC H GLV
Sbjct: 315 FDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLV 374
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG F M+ +GIEP++E YGCM+D+LGR G L+EA + RM EA+ + SLL+
Sbjct: 375 DLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLS 434
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++ +GE + L + +SG++ +LSN YA LGRW+ + ++R+ M G+ K
Sbjct: 435 ACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKE 494
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 357
PGCS IEV+ +HEF +GD HP+ R+Y+ L ++N KF +L
Sbjct: 495 PGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYL 539
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y KV +++A LF NV +T+LI G+ +AI LF +M ++V D A+
Sbjct: 69 YCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAV 128
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---------------- 122
A L AC A+ G+ +H + + GL + L+++Y K
Sbjct: 129 TAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPE 188
Query: 123 ---------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
G + +A++VF M + + WT +I GL +G L++F M
Sbjct: 189 RDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREM 248
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ V+PNE+TF+ +LSAC +G +ELGR M+ + G+E G +I++ R G
Sbjct: 249 QVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMR-KCGVEVNRFVAGALINMYSRCGD 307
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ EA+ L + + + + + S++ ++G
Sbjct: 308 IDEAQALFDGVRVK-DVSTYNSMIGGLALHG 337
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 227/359 (63%), Gaps = 3/359 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-- 70
+++A YA GD + AR LF M ++ ++W LI+ A+ + +A+ LF M+ +
Sbjct: 158 TSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMRGRDSG 217
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+PD++ + L AC LGA++ GE + Y E++G + + N+LI MY++ G + KA
Sbjct: 218 AEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGCVDKAY 277
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF KSV+TW+ MI+GLA +G G +A+ F M R+ V P+E TF +LSAC H G
Sbjct: 278 RVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGVLSACSHSG 337
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL-RRMPFEANAAIWGS 249
LV+ G R+F++M+ YG++P + YGC++DL+GRAG L EA +L+ M +A IW +
Sbjct: 338 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVAPDATIWRT 397
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G V+LGE + +LI+L+ +G+Y +L N YA +G W++ ++RK+M++ G+
Sbjct: 398 LLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVRKLMQEKGI 457
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
+ PGC+ +E + V+EF+A D +HP +Y+ L +IN Q++ A ++ N S + + D
Sbjct: 458 QTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNVSSELHDLD 516
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++A Y++ G ++ A +F +K+V++W+ +I+G A ++AI+ F M
Sbjct: 258 KVRNSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRS 317
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIGK 128
+V PDE LSAC+ G V+ G + + +YGL V ++D+ ++G + +
Sbjct: 318 DVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDE 377
Query: 129 ALQVFEN-MKNKSVIT-WTTMIAGLALHG 155
A ++ N MK T W T++ +HG
Sbjct: 378 AYELVTNEMKVAPDATIWRTLLGACRIHG 406
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 53 MDQPNEAITLFRRMQVENVKPDEIAMLAALSA-CAQLGAVELGEWIHNYIEQYGLNTIVP 111
+ P++A+ RRM+ + + + L CA A +L H + G
Sbjct: 100 LSDPSDALRFLRRMRALGRRGNAFTLAILLKPRCALAHARQL----HANVVAEGHLRDAL 155
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 171
L +L+ YA G A ++F M + + W +I+ A + ++AL +F M R R
Sbjct: 156 LATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEM-RGR 214
Query: 172 ---VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+P+++T I +L AC +G ++ G + + + +G K++ +I + R G +
Sbjct: 215 DSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEE-HGYGAKLKVRNSLIAMYSRCGCV 273
Query: 229 QEAEKLLRRMPFEANAAIWGSLLA--ASNIYGD 259
+A ++ P + + W ++++ A+N +GD
Sbjct: 274 DKAYRVFCGTP-QKSVVTWSAMISGLAANGFGD 305
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 216/347 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K ++ A +F + + +SW +I GYAQ + +EA+ F M+ +K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M++ + A A+L +WIH I + L+ + + AL+DMY+K G I A ++
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + ++ VITW MI G HGLGR ALD+F +M++ V+PN+IT+++++SAC H GLV
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLV 567
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G R+F MK YG+EP ++ YG M+DLLGRAG ++EA + MP ++G++L
Sbjct: 568 DEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLG 627
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ ++E+GE A + L +L P G + +L+NIYA +W++ ++RK M G+KK
Sbjct: 628 ACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKT 687
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS +E+ VH F +G T+HP R+Y L ++ ++K A ++ +
Sbjct: 688 PGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPD 734
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 147/272 (54%), Gaps = 10/272 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G + AR +F+ M +K V+SW +++ GY Q +P +AI +F +M E + P + +
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ AL ACA LG +E G+++H +++Q L + + + N+LI MY+K ++ A +F N+
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++ ++W MI G A +G EAL+ FS M+ +KP+ T ++++ A + + ++
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA-KW 471
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + R ++ I ++D+ + G + A KL M + + W +++ YG
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLF-DMISDRHVITWNAMIDG---YG 527
Query: 259 DVELGECALQHLIKL-----EPHNSGNYAILS 285
LG AL K+ EP++ +++S
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVIS 559
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 105/178 (58%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK +++A +F+ M E++++SW T+IAG++Q +A+ L RMQ E +PD I +
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L A A +G + +G+ IH Y + G +V ++ AL DMY+K G + A +F+ M
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ 311
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K+V++W +M+ G +G +A+ +F +M + P +T + L AC +G +E G+
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
F +V+ ++K G +N A +FE + +K + T++ GYA+ A+ RM+ ++
Sbjct: 83 FQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP L C ++ G+ IH + V +++MYAK +I A
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M + +++W T+IAG + +G ++AL++ RM+ +P+ IT + +L A VG
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ +G+ R G + + D+ + G ++ A + M + W S+
Sbjct: 263 LLMVGKSIHG-YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD-QKTVVSWNSM 320
Query: 251 L 251
+
Sbjct: 321 M 321
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 206/302 (68%), Gaps = 2/302 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK GD+ AR LF+ + E++V+SW +I+GY + A+ LF +MQ
Sbjct: 182 WNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G +++G+ +H+ + + + N V L NALIDMYAK G + A
Sbjct: 242 KPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF +M++K V TW +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ GR +FN+M+ +Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A ++G++EL + A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 310 KK 311
K
Sbjct: 482 NK 483
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAM 78
G + +A +F+ + + + TLI G A P +A++L+ RM V+PD++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC +GA + G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ + W+ MI G A G A D+F + VK + +++ +++A G + L R
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLF---DECPVK-DLVSWNVMITAYAKRGDMALAREL 201
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANAAIWGSLLAASN 255
F+ + R + + MI R G A +L ++RM + + SLL+A
Sbjct: 202 FDQVPER-----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 256
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSN----IYAILGRWNESGKIRKVMRDMGV 309
GD+++G+ L + N G +L N +YA G + ++ MRD V
Sbjct: 257 DSGDLDVGQRLHSSLSDMFSRN-GFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDV 313
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
MF+ + N ++ YAK G + +A +F M +K+V +W +++ G A E+I
Sbjct: 274 MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESI 333
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDM 119
+F +M V+PDEI +A L AC+ G V+ G N ++ +Y + + ++DM
Sbjct: 334 DMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDM 393
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A + + MK + + W T+++ +HG
Sbjct: 394 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----ERARVKPNE 176
A G I A VF+ + + T+I G A R+A+ +++RM V+P++
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 177 ITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF +L AC +G + G + + +++K+ G E +I + G L A L
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKA--GCESDAFVKNALIGMHASCGNLGIAAALF 140
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVE-----LGECALQHLI 271
E +A W +++ GD+ EC ++ L+
Sbjct: 141 DGRARE-DAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 225/343 (65%), Gaps = 1/343 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++ Y K G+++ A +F+ + EK++++W+ +I GYAQ+ A+ +F +M E +K
Sbjct: 45 TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIK 104
Query: 73 PDEIAMLAALSACAQLGA-VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E ++ACA A VE G+ +H + + N + +++AL+ MY+K G I A +
Sbjct: 105 PNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFE 164
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ + + +++W ++I+G A HG GR+AL++F M+R ++ + +TFI ++SAC H GL
Sbjct: 165 VFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGL 224
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G+RYF+IM + IEP++E Y CM+DL GRAG L +A +++ MPF A+A +W +LL
Sbjct: 225 ANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLL 284
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AAS I+ ++E+G+ A LI L+P N +Y +L+N+YA +G W E K+RK+M + VKK
Sbjct: 285 AASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKK 344
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+ G S+IEV + + F+AGD SHP +++Y L +++ Q+K A
Sbjct: 345 VAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGA 387
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWI--HNYIEQYGLNTIVPLNNALIDMYAKS 123
M E +KP++ L+A + E+ NY++ + T AL+D Y K
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGT------ALLDAYVKR 54
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
G + +A +VF+ ++ K ++ W+ MI G A G A+ +F +M + ++KPNE TF I+
Sbjct: 55 GNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGII 114
Query: 184 SAC-CHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+AC VE G++ +KSR+ + ++ + + G ++ A ++ +R E
Sbjct: 115 NACAAPTAGVEQGKQLHAWSIKSRFNNALCVS--SALLTMYSKRGDIESAFEVFKRQR-E 171
Query: 242 ANAAIWGSLLAASNIYG 258
+ W S+++ +G
Sbjct: 172 RDLVSWNSIISGYAQHG 188
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 233/363 (64%), Gaps = 9/363 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN------VK 72
+A+ G+L AR +F+ + KNV+ W+ +IAGY Q P EA+ LFR+M +E VK
Sbjct: 320 HARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVK 379
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +++ ++AC++LGA IH Y GL+ + +ALIDM AK G I QV
Sbjct: 380 PNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQV 439
Query: 133 FENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F M ++V++W++MI +HG G+ AL++FS M +PNEIT+I++LSAC H G
Sbjct: 440 FSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAG 499
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ FN M+ YG+ P + Y C++DLLGRAG+L EA ++ MP +A+ A+WGSL
Sbjct: 500 LVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSL 559
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA +++G+ +LGE + ++ L+ ++ G++ +L+N+Y GRW++ ++R +R G++
Sbjct: 560 LAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLR 619
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM-KFAEHLQNEFSGVLESDV 369
K+PG S+IE+ V+ F+A D SHP+ + +Y+ L ++ ++ K A+++ V + D+
Sbjct: 620 KIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDI 679
Query: 370 ASM 372
A +
Sbjct: 680 AGL 682
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 25/267 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N+MV Y+ D+ A +F + +++V+SW +LI+G+ + A+ F M E
Sbjct: 204 NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEG 263
Query: 71 ---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKS 123
V+P+ + ++A L +CA+LG VE W+H YI + +V + AL+DM+A+
Sbjct: 264 TSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARC 323
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR------MERARVKPNEI 177
G + A ++F+ ++ K+V+ W+ MIAG EAL +F + M VKPN +
Sbjct: 324 GNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAV 383
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ----YGCMIDLLGRAGYLQEAEK 233
T +++++AC LG M +Y + ++Q +ID+ + G ++ +
Sbjct: 384 TLVSVIAAC-----SRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 234 LLRRMPFEANAAI-WGSLLAASNIYGD 259
+ M + W S++ A I+G+
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGE 465
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 127/312 (40%), Gaps = 35/312 (11%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
++ K+ W +LIA A + P A+T F RMQ V + A L ACA L +
Sbjct: 13 ISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLA 152
+H Y+ + GL AL+D Y K G A QVF+ M S V++WT +I+ +
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 153 LHGLGREALDMFSRMERAR-------VKPNEITFIAILSAC---CHVGLVELGRRYFNIM 202
+G EA F RM R + ++ A++SAC C + G ++
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-WGSLLAASNIYGDVE 261
+YG M+ + + A ++ +P E + W SL++ + G+ E
Sbjct: 192 -VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250
Query: 262 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 321
+ ++ + G A+ N ++ ++ GC +E S
Sbjct: 251 RALRTFEDMV-----SEGTSAVEPNRVTVIALLKSCAEL-------------GC--VETS 290
Query: 322 KRVHEFVAGDTS 333
VHE+++ S
Sbjct: 291 SWVHEYISSRHS 302
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 202/308 (65%), Gaps = 2/308 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y D+ +R LFE + +++W +I + + NEA+ +F RM ++
Sbjct: 127 NTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIE 186
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PDE + LSAC+ LGA++ G W+H+ I G I +NN+L+DMYAK G + +A ++
Sbjct: 187 PDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEI 246
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGL 191
F M K+ +TW TMI GLA HG EAL +FS M E+ P++ITF+ +LSAC H G+
Sbjct: 247 FNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGM 306
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+F+IMK Y I+P I+ YGCM+D+LGRAG+++EA +L+ MP + NA +W +LL
Sbjct: 307 VDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLL 366
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA ++G+VELG+ + L++LEP +S +Y +L+N YA GRWNE+ ++RK M GV+K
Sbjct: 367 AACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQK 426
Query: 312 M-PGCSYI 318
PG S +
Sbjct: 427 PEPGNSVV 434
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 121/232 (52%), Gaps = 2/232 (0%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 79
A+ GD+N A ++FE + + + + T+I G+ + + P +A ++RMQ + D
Sbjct: 33 AEHGDMNYAVSVFEKIGDPDAFIFNTMIRGFGKANDPRKAFDYYKRMQERGLVSDSFTFS 92
Query: 80 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L C QLG V LG +H + GLN+ V + N L+ MY I + Q+FE + N
Sbjct: 93 FLLKVCGQLGLVLLGRLMHCSTLKRGLNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNP 152
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 199
++ W +I G EAL+MFSRM + ++P+E TF+ ILSAC +G ++ G R+
Sbjct: 153 ELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSALGALDFG-RWV 211
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ S G E ++D+ + G LQEA ++ M + N W +++
Sbjct: 212 HSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMN-KKNTVTWNTMI 262
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 224/340 (65%), Gaps = 12/340 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VE-- 69
NT++ Y+++G ++ A +F M ++++++W T+I GY + +A+ L +MQ +E
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 416
Query: 70 --------NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
++KP+ I ++ L +CA L A+ G+ IH Y + L T V + +AL+DMYA
Sbjct: 417 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 476
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G + + +VF+ + K+VITW +I +HG G+EA+D+ M VKPNE+TFI+
Sbjct: 477 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 536
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
+ +AC H G+V+ G R F +MK YG+EP + Y C++DLLGRAG ++EA +L+ MP +
Sbjct: 537 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 596
Query: 242 AN-AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
N A W SLL AS I+ ++E+GE A Q+LI+LEP+ + +Y +L+NIY+ G W+++ ++
Sbjct: 597 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 656
Query: 301 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 340
R+ M++ GV+K PGCS+IE VH+FVAGD+SHP ++L
Sbjct: 657 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 696
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
+ +V Y + + R +F+ M ++ + W +IAGY+Q + EA+ LF M+ +
Sbjct: 255 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 314
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ M + AC + GA E IH ++ + GL+ + N L+DMY++ GKI A++
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 374
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-----------RARVKPNEITFI 180
+F M+++ ++TW TMI G +AL + +M+ R +KPN IT +
Sbjct: 375 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 434
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
IL +C + + G+ + + + + ++D+ + G LQ + K+ ++P
Sbjct: 435 TILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 492
Query: 241 EANAAIWGSLLAASNIYGD 259
+ N W ++ A ++G+
Sbjct: 493 QKNVITWNVIIMAYGMHGN 511
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+VA Y K+G L +++ L +++++W T+++ Q +Q EA+ R M +E V+
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + + L AC+ L + G+ +H Y + G L+ + +AL+DMY ++ +
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 272
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVG 190
VF+ M ++ + W MIAG + + +EAL +F ME A + N T ++ AC G
Sbjct: 273 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 332
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+ R G++ ++D+ R G + A ++ +M + + W ++
Sbjct: 333 AFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTM 390
Query: 251 LAA 253
+
Sbjct: 391 ITG 393
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V Y K GD +F+ ++E+N +SW +LI+ ++ A+ FR M ENV+
Sbjct: 50 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 109
Query: 73 PDEIAMLAALSACAQLGAVE---LGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGK 128
P +++ ++AC+ L E +G+ +H Y + G LN+ + N L+ MY K GK+
Sbjct: 110 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLAS 167
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+ + + + ++TW T+++ L + EAL+ M V+P+E T ++L AC H
Sbjct: 168 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 227
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
+ ++ G+ ++ ++D+ + ++ M F+ +W
Sbjct: 228 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWN 286
Query: 249 SLLAA 253
+++A
Sbjct: 287 AMIAG 291
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSG 124
M V +KPD A A L A A L +ELG+ IH ++ ++G V + N L+++Y K G
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
G +VF+ + ++ ++W ++I+ L AL+ F M V+P+ T +++++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 185 ACCHVGLVE 193
AC ++ + E
Sbjct: 121 ACSNLPMPE 129
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 214/346 (61%), Gaps = 4/346 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN+++ G+ + G +N A+ +F M + N+I+WTTLI+G AQ EAI F++MQ
Sbjct: 1583 WNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ 1642
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++P ++ + L AC + ++ G IH +I ++ VP+ +L+DMYAK G I
Sbjct: 1643 EAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSID 1702
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
+A +VF M +K + + MI+ ALHG EAL +F +++ ++P+ ITF +ILSAC
Sbjct: 1703 EAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACS 1762
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H GLV G F M S++ + P +E YGC++ LL R G L EA +L+ MPF+ +A I
Sbjct: 1763 HAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHIL 1822
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
GSLL A + ++ELGE +HL KLEP NSGNY LSN YA GRW E +R +M+
Sbjct: 1823 GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVR 1882
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
G++K PGCS+I+ +++ FVAGD SHP + +Y +L + +M+F
Sbjct: 1883 GLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRF 1928
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 18/310 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y+KVG + +A +F M EK+V++W LI+ Y Q Q +A+ + M+ EN++
Sbjct: 1417 SSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 1476
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + LSA A ++LG+ H Y + L + V + N++IDMYAK +I A +V
Sbjct: 1477 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKV 1536
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F++ + ++ W T++A A GL EAL +F +M+ V PN I++ +++ G V
Sbjct: 1537 FDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQV 1596
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN-----AAIW 247
+ F+ M+S G +P + + +I L ++G+ EA ++M EA A+I
Sbjct: 1597 NEAKDMFSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ-EAGIRPSIASIT 1654
Query: 248 GSLLAASNI----YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 303
LLA ++I YG G P + L ++YA G +E+ +KV
Sbjct: 1655 SVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCGSIDEA---KKV 1707
Query: 304 MRDMGVKKMP 313
M K++P
Sbjct: 1708 FHMMSSKELP 1717
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 151/304 (49%), Gaps = 13/304 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V Y K G L +AR +F+ M EKNV++W ++I GY Q EAI +F M+VE ++
Sbjct: 1316 SSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIE 1375
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + + LSA A L A+ G+ H L+ L +++I+ Y+K G I A V
Sbjct: 1376 PTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELV 1435
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K V+TW +I+ H +AL+M M ++ + +T +ILSA +
Sbjct: 1436 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 1495
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG+ + R +E + +ID+ + + +A K+ E + +W +LLA
Sbjct: 1496 KLGKEG-HCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTT-ERDLVLWNTLLA 1553
Query: 253 ASNIYGDVELGECALQHLIKLE----PHN--SGNYAILSNIYAILGRWNESGKIRKVMRD 306
A Y V L AL+ +++ P N S N IL + G+ NE+ + M+
Sbjct: 1554 A---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRN--GQVNEAKDMFSQMQS 1608
Query: 307 MGVK 310
+G +
Sbjct: 1609 LGFQ 1612
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 4/240 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK A LF + +NV SW ++ +M +A+ F MQ V PD
Sbjct: 1217 LVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPD 1276
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC L + LG+ +H Y+ + G V ++++L+DMY K G + A +VF+
Sbjct: 1277 NFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFD 1336
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLVE 193
+M K+V+TW +MI G +GL +EA+D+F M ++P +T + LSA ++ L+E
Sbjct: 1337 SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIE 1396
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + + + ++ + +I+ + G +++AE + RM E + W L+++
Sbjct: 1397 GKQGHAIAILNSLDLDNILGS--SIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISS 1453
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 233/363 (64%), Gaps = 9/363 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN------VK 72
+A+ G+L AR +F+ + KNV+ W+ +IAGY Q P EA+ LFR+M +E VK
Sbjct: 320 HARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVK 379
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + +++ ++AC++LGA IH Y GL+ + +ALIDM AK G I QV
Sbjct: 380 PNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQV 439
Query: 133 FENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F M ++V++W++MI +HG G+ AL++FS M +PNEIT+I++LSAC H G
Sbjct: 440 FSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAG 499
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LVE G+ FN M+ YG+ P + Y C++DLLGRAG+L EA ++ MP +A+ A+WGSL
Sbjct: 500 LVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSL 559
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA +++G+ +LGE + ++ L+ ++ G++ +L+N+Y GRW++ ++R +R G++
Sbjct: 560 LAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLR 619
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM-KFAEHLQNEFSGVLESDV 369
K+PG S+IE+ V+ F+A D SHP+ + +Y+ L ++ ++ K A+++ V + D+
Sbjct: 620 KIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDI 679
Query: 370 ASM 372
A +
Sbjct: 680 AGL 682
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 25/267 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N+MV Y+ D+ A +F + +++V+SW +LI+G+ + A+ F M E
Sbjct: 204 NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEG 263
Query: 71 ---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKS 123
V+P+ + ++A L +CA+LG VE W+H YI + +V + AL+DM+A+
Sbjct: 264 TSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARC 323
Query: 124 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR------MERARVKPNEI 177
G + A ++F+ ++ K+V+ W+ MIAG EAL +F + M VKPN +
Sbjct: 324 GNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAV 383
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ----YGCMIDLLGRAGYLQEAEK 233
T +++++AC LG M +Y + ++Q +ID+ + G ++ +
Sbjct: 384 TLVSVIAAC-----SRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 234 LLRRMPFEANAAI-WGSLLAASNIYGD 259
+ M + W S++ A I+G+
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGE 465
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 127/312 (40%), Gaps = 35/312 (11%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 94
++ K+ W +LIA A + P A+T F RMQ V + A L ACA L +
Sbjct: 13 ISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLA 152
+H Y+ + GL AL+D Y K G A QVF+ M S V++WT +I+ +
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 153 LHGLGREALDMFSRMERAR-------VKPNEITFIAILSAC---CHVGLVELGRRYFNIM 202
+G EA F RM R + ++ A++SAC C + G ++
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-WGSLLAASNIYGDVE 261
+YG M+ + + A ++ +P E + W SL++ + G+ E
Sbjct: 192 -VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250
Query: 262 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 321
+ ++ + G A+ N ++ ++ GC +E S
Sbjct: 251 RALRTFEDMV-----SEGTSAVEPNRVTVIALLKSCAEL-------------GC--VETS 290
Query: 322 KRVHEFVAGDTS 333
VHE+++ S
Sbjct: 291 SWVHEYISSRHS 302
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 209/330 (63%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
G A+V D+ + +F+ M K +ISW ++A Y + EA+ LF RMQ + ++PD +
Sbjct: 235 GKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVT 294
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L +C ++ A+ LG+ IH I++ + + + L NAL+DMYA G + +A VF++M
Sbjct: 295 LATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMG 354
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ V++WT++I+ HG GREA+D+F +M ++P+ I F+AIL+AC H GL+++G+
Sbjct: 355 TRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKH 414
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
YF M S + I PK+E Y CM+DLLGRAG ++EA + MP + N +WG+LL A I+
Sbjct: 415 YFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIH 474
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++++G A L++L P +G Y +LSNIYA GRW + +R VM G+KK+PG S
Sbjct: 475 SNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSN 534
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
E+ RVH F GDTSHP +Y+ L ++
Sbjct: 535 AELGDRVHTFHIGDTSHPQSKMIYKKLSEL 564
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
++ ++ YA+ G ++A +FE M ++V+SW +I+G+A A+ +FR + ++
Sbjct: 161 HSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCP 220
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD M + L + + A+ I
Sbjct: 221 KPDAGTMASILPSMGK---------------------------------ARVEDIALLKG 247
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ K +I+W M+A + + EA+++F RM++ ++P+ +T +L +C V
Sbjct: 248 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 307
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LG+R ++K R + + ++D+ G L+EA + M + W S++
Sbjct: 308 LSLGKRIHEVIKRRRMCSSMLLE-NALMDMYANCGCLKEARDVFDSMGTR-DVVSWTSII 365
Query: 252 AASNIYG 258
+A +G
Sbjct: 366 SAYGRHG 372
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELG 94
++ + + L+ G +A+ LF M+ + PD AL +CA + LG
Sbjct: 82 DRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLG 141
Query: 95 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
IH+ + GL+ V + ++ I MYA+ G+ A Q+FE M+ + V++W MI+G A
Sbjct: 142 RQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHA 201
Query: 155 GLGREALDMFSRMERARV-KPNEITFIAILSA 185
GL A+D+F + + KP+ T +IL +
Sbjct: 202 GLFGRAMDVFRELVALQCPKPDAGTMASILPS 233
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 203/332 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G ++ AR LF+ M EK +I+W +I+GYAQ + L+R+M+ +
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++ LS+CA LGA G + IE G L NALI+MYA+ G + KA +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M K+VI+WT +IAG +HG G A+ +F M + P+ F+++LSAC H GL
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF M+ YG++P E Y C++DLLGRAG L+EA KL+ M E + A+WG+LL
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+ +VEL E A + +I+ EP N G Y +LSNI++ G ++R +MR+ +KK
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PGCSY+E R+H F+AGD +HP +Y +L
Sbjct: 498 PGCSYVEYQGRIHLFLAGDRTHPQAQEIYHML 529
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 144/278 (51%), Gaps = 8/278 (2%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNV-ISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
++++ Y K + +AR +F E +N+ + + LIAGY+ + ++A+ LFR+M+ E
Sbjct: 95 TSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEG 154
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V + + ML + CA + G +H ++GL+ + + N L+ MY + G + A
Sbjct: 155 VSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFAR 214
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F+ M K +ITW MI+G A +GL LD++ +ME + P+ +T + +LS+C H+G
Sbjct: 215 KLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLG 274
Query: 191 LVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GR I S +G P ++ +I++ R G L +A + M E N W +
Sbjct: 275 AHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGMT-EKNVISWTA 331
Query: 250 LLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 285
++A ++G EL +I + P + ++LS
Sbjct: 332 IIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLS 369
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
+ SW + A+ EA+ L+ +M P+ A +CA L G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF-ENMKNKSV-ITWTTMIAGLALH 154
+H ++ + G + +LI MY K I A +VF EN ++++ + + +IAG +L+
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIE 213
+A+ +F +M + V N +T + ++ C G + LG + R+G++ +
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRFGLDGDLS 195
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
C++ + R G + A KL MP E W ++++
Sbjct: 196 VGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISG 234
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 225/360 (62%), Gaps = 6/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WN M+ GY + GD+ A LF+ M KNV SWTT+I+G++Q +EA+ +F M+ + +
Sbjct: 144 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 203
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+ I +++ L ACA LG +E+G + Y + G + + NA I+MY+K G I A
Sbjct: 204 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 263
Query: 131 QVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++FE + N +++ +W +MI LA HG EAL +F++M R KP+ +TF+ +L AC H
Sbjct: 264 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 323
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V G+ F M+ + I PK+E YGCMIDLLGR G LQEA L++ MP + +A +WG+
Sbjct: 324 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 383
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VE+ E A + L KLEP N GN I+SNIYA +W+ ++RK+M+ +
Sbjct: 384 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 443
Query: 310 KKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K G SY +EV VH+F D SHP +YQ+L +I +MK ++ F +L+ +
Sbjct: 444 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE---KSRFDSLLQPE 500
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------- 73
+ +L AR LF+ + LI Y QP+E+I L+ + + ++P
Sbjct: 22 IPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 81
Query: 74 ---------------------------DEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 106
D ++A A+LGA+ + + + +
Sbjct: 82 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRD- 140
Query: 107 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
VP+ NA+I Y + G + A+++F++M K+V +WTT+I+G + +G EAL MF
Sbjct: 141 ---VPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLC 197
Query: 167 MERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
ME+ + VKPN IT +++L AC ++G +E+GRR + G I I++ +
Sbjct: 198 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN-GFFDNIYVCNATIEMYSKC 256
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G + A++L + + N W S++ + +G
Sbjct: 257 GMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 289
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/310 (44%), Positives = 209/310 (67%), Gaps = 10/310 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++AG+ + ++ AR LF M E++V SW+T+I+GY Q DQP A+ LF RM ++
Sbjct: 263 NALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIR 322
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSGKIGK 128
P+E+ M++ SA A LG ++ G W H Y+ N+I PLN+ ++IDMYAK G I
Sbjct: 323 PNEVTMVSVFSAIAALGTLKEGRWAHEYVH---YNSI-PLNDNLSASIIDMYAKCGSINT 378
Query: 129 ALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
AL+VF +++K +V W T+I GLA HG + +L+++S ++R +K + ITFI +LSAC
Sbjct: 379 ALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVLSAC 438
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
CH GLV LG+ YF MKS+Y I+P I YGCM+DLLG+AG L+E E+L+R MP +A+ I
Sbjct: 439 CHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMKADVVI 498
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WG LL+A + ++ +GE A ++L KL+P + + +LSN+YA +GRW ++ +R+VM+
Sbjct: 499 WGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQS 558
Query: 307 MGVKKMPGCS 316
+ ++PG S
Sbjct: 559 HRMHRLPGYS 568
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 145/288 (50%), Gaps = 43/288 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY+K G N A+ +FE++ +K+++SW T+I GY ++++ EA+ ++R M +
Sbjct: 130 WNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGL 189
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIH-----------NYIE------------------ 102
P E+ M+ +SAC + A+ G+ +H ++++
Sbjct: 190 GPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACF 249
Query: 103 --QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
++G+ V NALI + ++ I +A ++F M + V +W+TMI+G A
Sbjct: 250 QLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMA 309
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-----RYFNIMKSRYGIEPKIEQY 215
L++F RM + ++PNE+T +++ SA +G ++ GR ++N + + I
Sbjct: 310 LELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASI--- 366
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANA-AIWGSLLAASNIYGDVEL 262
ID+ + G + A ++ ++ +A+ + W +++ +G +L
Sbjct: 367 ---IDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKL 411
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 31/203 (15%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M++GY K G+L++AR LFE+M +K +S+TT+I G+ + D EAI +++ M+ V P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E+ M + +SAC ++G + +H + + + V ++ L++MY S +G+A +F+
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 135 NMKNKSVITWTTMIAGLALHGLG-------------------------------REALDM 163
M+ K+V++W M+ G + G REAL M
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 164 FSRMERARVKPNEITFIAILSAC 186
+ M + P+E+T I ++SAC
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISAC 203
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
+I Y KSG + A ++FE M K +++TTMI G + EA+ ++ M V PN
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 176 EITFIAILSACCHVGLV 192
E+T +++SACC VG +
Sbjct: 61 EVTMASVISACCRVGRI 77
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 206/345 (59%), Gaps = 6/345 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE+M EK++ SW ++++ + Q + + L RM ++
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQ 335
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVPLNNALIDMYAKSGKI 126
PD + + L AC+ L A+ G IH Y+ GL V L NA+IDMYAK G +
Sbjct: 336 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 395
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC
Sbjct: 396 RDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L MP EAN +
Sbjct: 456 SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 515
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+ E ++R MR
Sbjct: 516 WRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQ 575
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
V+K PGCS+IE+ VH FV+ D +HP+ +Y L + ++
Sbjct: 576 QNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARL 620
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 7 LLYKFW--------NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
LL+KF + +V Y K G + +A+ FE + ++V+ W ++ GYAQ+ Q
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
+ FRRM E+V P + LS A +G + G IH + + G ++ V ++N+LID
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MY K I AL++FE M+ K + +W ++++ G L + RM A ++P+ +T
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEK 233
+L AC H+ + GR M S G + K + +ID+ + G +++A
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
+ RM + A W ++ ++G
Sbjct: 401 VFERMS-NKDVASWNIMIMGYGMHG 424
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 37 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 96
E NV ++ +I+G+ P E +++M+ E V PD+ A+ AC L +E+ +
Sbjct: 101 EINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKAC--LDVLEIKK- 157
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GL V + +AL++ Y K G + A FE + + V+ W M+ G A G
Sbjct: 158 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
L+ F RM V P+ T LS +G + G R + + G + +
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSN 276
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+ID+ G+ +++A ++ M E + W S+++ GD
Sbjct: 277 SLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIVSVHEQCGD 318
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 219/339 (64%), Gaps = 1/339 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ + K+G++++A +FEL+ K+VI+W+ ++AGYAQ + EA +F ++ E +KP+
Sbjct: 443 LLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPN 502
Query: 75 EIAMLAALSAC-AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
E + ++AC A +VE G+ H Y + LN + ++++L+ +YAK G I A ++F
Sbjct: 503 EFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIF 562
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ K + +++W +MI+G A HG ++AL++F M++ ++ + ITFI ++SAC H GLV
Sbjct: 563 KRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVG 622
Query: 194 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
G+ YFNIM + + I P +E Y CMIDL RAG L +A ++ MPF A +W +LAA
Sbjct: 623 KGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682
Query: 254 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 313
S ++ ++ELG+ A + +I LEP +S Y +LSNIYA G W+E +RK+M VKK P
Sbjct: 683 SRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEP 742
Query: 314 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S+IEV + + F+AGD SHP D +Y L ++N +++
Sbjct: 743 GYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLR 781
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 130/250 (52%), Gaps = 3/250 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++V Y K G++ + R +F+ M +++V+SW +L+ GY+ ++ LF MQVE +
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + ++A A GAV +G IH + + G T + N+LI M +KSG + A V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+NM+NK ++W +MIAG ++G EA + F+ M+ A KP TF +++ +C L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLK 318
Query: 193 ELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG R + + G+ ++ L + + +A L M + W +++
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMI 378
Query: 252 AASNIYGDVE 261
+ GD +
Sbjct: 379 SGYLQNGDTD 388
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTE-KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++ K ++++A +LF LM ++V+SWT +I+GY Q ++A+ LF M+ E VKP
Sbjct: 345 LMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKP 404
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L+ AV + E IH + + + AL+D + K G I A++VF
Sbjct: 405 NHFTYSTILTV---QHAVFISE-IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC-CHVGLV 192
E ++ K VI W+ M+AG A G EA +F ++ R +KPNE TF +I++AC V
Sbjct: 461 ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASV 520
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
E G+++ Y I+ ++ C ++ L + G ++ A ++ +R E + W
Sbjct: 521 EQGKQFH-----AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWN 574
Query: 249 SLLAASNIYGDVE 261
S+++ +G +
Sbjct: 575 SMISGYAQHGQAK 587
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 3/243 (1%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
D A+ LF+ +++ L+ Y++ DQ EA+ LF + + PD M L
Sbjct: 50 SDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVL 109
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
S CA +GE +H + GL + + N+L+DMY K+G + +VF+ M ++ V+
Sbjct: 110 SVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVV 169
Query: 143 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 202
+W +++ G + + + ++F M+ +P+ T +++A + G V +G + + +
Sbjct: 170 SWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQ-IHAL 228
Query: 203 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVE 261
+ G E + +I +L ++G L++A + M ++ W S++A I G D+E
Sbjct: 229 VVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIAGHVINGQDLE 287
Query: 262 LGE 264
E
Sbjct: 288 AFE 290
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V YAK G++ +A +F+ E++++SW ++I+GYAQ Q +A+ +F MQ N++
Sbjct: 543 SSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLE 602
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D I + +SACA G V G+ N I + +N + + +ID+Y+++G +GKA+
Sbjct: 603 VDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMD 662
Query: 132 VFENMKNKSVIT-WTTMIAGLALH 154
+ M T W ++A +H
Sbjct: 663 IINGMPFPPAATVWRIVLAASRVH 686
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 208/340 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y+K G L + R +F+ M E++++SWTTL+ Y+Q EA+ F M+ E
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 524
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + L +CA L +E G +H + + GL+T + +ALIDMYAK G I +A +V
Sbjct: 525 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 584
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + N +++WT +I+G A HGL +AL +F RME + +K N +T + +L AC H G+V
Sbjct: 585 FDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 644
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF M+ YG+ P++E Y C+IDLLGR G L +A + +R+MP E N +W +LL
Sbjct: 645 EEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLG 704
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++G+VELGE A + ++ + P S Y +LSN Y G + + +R VM+D GVKK
Sbjct: 705 GCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKE 764
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+I V RVH+F +GD HP +Y L ++ ++K
Sbjct: 765 PGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 804
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 130/251 (51%), Gaps = 15/251 (5%)
Query: 19 YAKVGDLNNARALFELMTEKNVIS------WTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
Y+K G L++AR++F+ N I+ W +I+GY+Q EA+ L+ +M +
Sbjct: 367 YSKCGSLHDARSVFD----TNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 422
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQ 131
D + +A A +++ G +H + + GL+ +V +NNA+ D Y+K G + +
Sbjct: 423 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 482
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + +++WTT++ + LG EAL F M PN+ TF ++L +C +
Sbjct: 483 VFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCF 542
Query: 192 VELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E GR+ ++ K+ E IE +ID+ + G + EA K+ ++ + W ++
Sbjct: 543 LEYGRQVHGLLCKAGLDTEKCIES--ALIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAI 599
Query: 251 LAASNIYGDVE 261
++ +G VE
Sbjct: 600 ISGYAQHGLVE 610
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K + A +F+ M ++NV SWT +I G + + F M + PD+ A
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A + +C L ++ELG+ +H I G T + ++ +L++MYAK G I + VF M
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++W MI+G +GL EA D+F RM+ PN T +++ A + V +G+
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
N S GIE + +ID+ + G L +A +
Sbjct: 345 QNC-ASELGIEGNVLVGTALIDMYSKCGSLHDARSVF 380
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK+G + ++ +F +MTE N +SW +I+G EA LF RM+ P+ +
Sbjct: 266 YAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTL 325
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE-NMK 137
++ A +L V +G+ + N + G+ V + ALIDMY+K G + A VF+ N
Sbjct: 326 VSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFI 385
Query: 138 NKSVIT-WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
N V T W MI+G + G +EAL+++ +M + + + T+ ++ +A ++ GR
Sbjct: 386 NCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGR 445
Query: 197 RYFNIMKSRYGIEPKIEQYGCMI-DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
M + G++ + I D + G+L++ K+ RM E + W +L+ A
Sbjct: 446 VVHG-MVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA-- 501
Query: 256 IYGDVELGECAL 267
Y LGE AL
Sbjct: 502 -YSQSSLGEEAL 512
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMY 120
+++ QV++ ++ L CA+ G++ + +H + + ++ L N +Y
Sbjct: 113 YQQTQVQD-------LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVY 165
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
+K + A VF+ M ++V +WT MI G HGL + F M + + P++ +
Sbjct: 166 SKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 225
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
AI+ +C + +ELG+ + R G I ++++ + G ++++ + M
Sbjct: 226 AIIQSCIGLDSLELGKMVHAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT- 283
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E N W ++++ G L A ++++ N A N+Y ++ GK+
Sbjct: 284 EHNQVSWNAMISGCTSNG---LHLEAFDLFVRMK-----NGACTPNMYTLVSVSKAVGKL 335
Query: 301 RKVMRDMGVKKMPGCS 316
V +MG K++ C+
Sbjct: 336 VDV--NMG-KEVQNCA 348
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/307 (45%), Positives = 202/307 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ +V + + G+L AR +F M E++V+SWT +++GYAQ + EA+ LFR M+ V
Sbjct: 355 WSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGV 414
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+AM++ +SAC LG +E G +H YI++ G +V L NALIDMYAK G + A Q
Sbjct: 415 RPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQ 474
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF+A+L+A H G
Sbjct: 475 VFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGW 534
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M N +WG+LL
Sbjct: 535 VDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALL 594
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ ++R+ M G KK
Sbjct: 595 AACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKK 654
Query: 312 MPGCSYI 318
GCS++
Sbjct: 655 TLGCSWV 661
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 43/283 (15%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
A + G L+ A LF + + N + TLI GY++ P++++ LF +M+ V PD
Sbjct: 224 AAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGF 283
Query: 77 AMLAALSACAQ----LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------- 121
L ++ L + + IH + + G + + NALI +YA
Sbjct: 284 TFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQV 343
Query: 122 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
++G++ A QVF M + V++WT M++G A REAL
Sbjct: 344 FNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREAL 403
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCM 218
++F M V+P+E+ ++++SAC +G +E G RY + G + +
Sbjct: 404 ELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYID----ENGFGWMVSLCNAL 459
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
ID+ + G + A ++ M + W S+++A +G+ E
Sbjct: 460 IDMYAKCGCMDLAWQVFNNME-RKSLITWNSMISACANHGNAE 501
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 127/306 (41%), Gaps = 45/306 (14%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM---------------------- 78
+SWT +++ YAQ + E + LFR ++ V+P ++
Sbjct: 119 VSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKVMHM 178
Query: 79 ------LAALS-ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--GKIGKA 129
LA+++ AC + A++L IH + L+ + + A S G + A
Sbjct: 179 LPTSQSLASMAEACLTMQALKL---IHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYA 235
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++F + + + T+I G + +++ +F++M R V P+ TF +L +
Sbjct: 236 DRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRM 295
Query: 190 G-----LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
+V + ++K G + +I L G A ++ M A+
Sbjct: 296 RIDLPLIVASDEIHGAVLK--LGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-VGADV 352
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
W L+ A G++EL A Q ++ + ++ ++ + YA R E+ ++ + M
Sbjct: 353 VSWSGLVVAHVRAGELEL---ARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREM 409
Query: 305 RDMGVK 310
RD+GV+
Sbjct: 410 RDVGVR 415
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 209/330 (63%)
Query: 18 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
G A+V D+ + +F+ M K +ISW ++A Y + EA+ LF RMQ + ++PD +
Sbjct: 125 GKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVT 184
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
+ L +C ++ A+ LG+ IH I++ + + + L NAL+DMYA G + +A VF++M
Sbjct: 185 LATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMG 244
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ V++WT++I+ HG GREA+D+F +M ++P+ I F+AIL+AC H GL+++G+
Sbjct: 245 TRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKH 304
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
YF M S + I PK+E Y CM+DLLGRAG ++EA + MP + N +WG+LL A I+
Sbjct: 305 YFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIH 364
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
++++G A L++L P +G Y +LSNIYA GRW + +R VM G+KK+PG S
Sbjct: 365 SNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSN 424
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
E+ RVH F GDTSHP +Y+ L ++
Sbjct: 425 AELGDRVHTFHIGDTSHPQSKMIYKKLSEL 454
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENV 71
++ ++ YA+ G ++A +FE M ++V+SW +I+G+A A+ +FR + ++
Sbjct: 51 HSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCP 110
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD M + L + + A+ I
Sbjct: 111 KPDAGTMASILPSMGK---------------------------------ARVEDIALLKG 137
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ K +I+W M+A + + EA+++F RM++ ++P+ +T +L +C V
Sbjct: 138 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 197
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LG+R ++K R + + ++D+ G L+EA + M + W S++
Sbjct: 198 LSLGKRIHEVIKRRRMCSSMLLE-NALMDMYANCGCLKEARDVFDSMGTR-DVVSWTSII 255
Query: 252 AASNIYG 258
+A +G
Sbjct: 256 SAYGRHG 262
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + +CA + LG IH+ + GL+ V + ++ I MYA+ G+ A Q+
Sbjct: 10 PGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQM 69
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEITFIAILSA 185
FE M+ + V++W MI+G A GL A+D+F + + KP+ T +IL +
Sbjct: 70 FEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS 123
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 225/360 (62%), Gaps = 6/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
WN M+ GY + GD+ A LF+ M KNV SWTT+I+G++Q +EA+ +F M+ + +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+ I +++ L ACA LG +E+G + Y + G + + NA I+MY+K G I A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 131 QVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++FE + N +++ +W +MI LA HG EAL +F++M R KP+ +TF+ +L AC H
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V G+ F M+ + I PK+E YGCMIDLLGR G LQEA L++ MP + +A +WG+
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A + +G+VE+ E A + L KLEP N GN I+SNIYA +W+ ++RK+M+ +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 310 KKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
K G SY +EV VH+F D SHP +YQ+L +I +MK ++ F +L+ +
Sbjct: 451 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE---KSRFDSLLQPE 507
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 22 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-------- 73
+ +L AR LF+ + LI Y QP+E+I L+ + + ++P
Sbjct: 29 IPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 88
Query: 74 ---------------------------DEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 106
D ++A A+LGA+ + + + +
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRD- 147
Query: 107 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
VP+ NA+I Y + G + A+++F++M K+V +WTT+I+G + +G EAL MF
Sbjct: 148 ---VPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLC 204
Query: 167 MERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
ME+ + VKPN IT +++L AC ++G +E+GRR + G I I++ +
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN-GFFDNIYVCNATIEMYSKC 263
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G + A++L + + N W S++ + +G
Sbjct: 264 GMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 210/341 (61%), Gaps = 1/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N ++ Y G L A +F+ M+E++ +SW+T+IA + +EA+ LF +MQ+E+ V
Sbjct: 123 NALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKV 182
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ ML+ +SA + LG +ELG W+ +I + G V L ALIDM+++ G I +++
Sbjct: 183 VPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIV 242
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M ++V+TWT +I GL +HG EAL MF M ++ V+P+ +TF +L AC H GL
Sbjct: 243 VFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGL 302
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G F ++ YG++P ++ YGCM+D+LGRAG L EA + RMP + N+ IW +LL
Sbjct: 303 VKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLL 362
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A + ++ L E + K+ +G+ +LSN+Y GRW E IR MR+ + K
Sbjct: 363 GACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGK 422
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS I V + +HEFV+GD SHP + + + L I G ++
Sbjct: 423 EPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLR 463
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 126/235 (53%), Gaps = 7/235 (2%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L+ AR +F + + I++ T+I +++ P+ +++ F M+ + D L A
Sbjct: 38 LSYARYVFSRIPSPDTIAYNTIIRSHSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLKA 96
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C++L ++ +H+ I +YGL + + + NALI +Y G + A++VF+ M + ++W
Sbjct: 97 CSRL---QINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSW 153
Query: 145 TTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
+T+IA +G EALD+F +M+ +V P+E+T ++++SA H+G +ELG R+
Sbjct: 154 STVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELG-RWVRAFI 212
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
R G + +ID+ R G + E+ + +M N W +L+ I+G
Sbjct: 213 GRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVR-NVLTWTALINGLGIHG 266
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 207/341 (60%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM++GYA+ G ++ A +F+ M EKN++SW +LIAG+ Q + +A+ M E
Sbjct: 393 WNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGK 452
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPD+ LSACA L A+++G +H YI + G + + NALI MYAK G++ A Q
Sbjct: 453 KPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQ 512
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +++ +I+W ++I+G AL+G +A F +M RV P+E+TFI +LSAC H GL
Sbjct: 513 VFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGL 572
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G F M + IEP E Y C++DLLGR G L+EA +R M +ANA +WGSLL
Sbjct: 573 ANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLL 632
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A ++ ++ELG A + L +LEPHN+ NY LSN++A GRW E ++R +MR K
Sbjct: 633 GACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGK 692
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV ++ F++ D + + IL + M+
Sbjct: 693 QPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMR 733
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 144/333 (43%), Gaps = 89/333 (26%)
Query: 12 WNTMVAGYAKVGDLNN-------------------------------ARALFELMTEKNV 40
WN MVAGY K GDL++ AR LF+ M KNV
Sbjct: 207 WNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNV 266
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRM-------------------------QVENVKP-- 73
+SW +IA Y Q Q +EA+ LF++M QV N P
Sbjct: 267 VSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCK 326
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYI----------------------EQYGLNTIVP 111
D A A +S Q G ++ + + + I E L +P
Sbjct: 327 DITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMP 386
Query: 112 LNNA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 166
+ N+ +I YA++G++ +A ++F+ M+ K++++W ++IAG + L +AL
Sbjct: 387 IKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVM 446
Query: 167 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 225
M + KP++ TF LSAC ++ +++G + I+KS Y + + +I + +
Sbjct: 447 MGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVG--NALIAMYAKC 504
Query: 226 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G +Q AE++ R + + W SL++ + G
Sbjct: 505 GRVQSAEQVFRDIEC-VDLISWNSLISGYALNG 536
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 21/298 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+AGYAK G N+A+ +FE M K+++S+ +++AGY Q + + A+ F M NV
Sbjct: 145 WNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNV 204
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ + + + A +L E I N + + L AK GK+ +A +
Sbjct: 205 VSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGL--------AKYGKMAEARE 256
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M +K+V++W MIA EA+ +F +M + +++ I++ VG
Sbjct: 257 LFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPH----KDSVSWTTIINGYIRVGK 312
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ R+ +N M + I ++ L + G + EA+++ R+ + W S++
Sbjct: 313 LDEARQVYNQMPCK-----DITAQTALMSGLIQNGRIDEADQMFSRIGAH-DVVCWNSMI 366
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
A + G ++ AL ++ NS ++ + + YA G+ + + +I + MR+ +
Sbjct: 367 AGYSRSGRMDE---ALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNI 421
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 25/302 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N+M++ AK + +AR LF+ M+ +N++SW T+IAGY + EA LF M
Sbjct: 51 YNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMP---- 106
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D + ++ + G +E + + L+T NA+I YAK G+ A +
Sbjct: 107 ERDNFSWALMITCYTRKGKLEKARELLELVPD-KLDTACW--NAMIAGYAKKGQFNDAKK 163
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M K ++++ +M+AG +G AL F M + N +++ +++ G
Sbjct: 164 VFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESM----TERNVVSWNLMVAGYVKSGD 219
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ + F + + P + M+ L + G + EA +L RMP N W +++
Sbjct: 220 LSSAWQLFEKIPN-----PNAVSWVTMLCGLAKYGKMAEARELFDRMP-SKNVVSWNAMI 273
Query: 252 AASNIYGDVELGECALQHLIKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
A D+++ E L K PH +S ++ + N Y +G+ +E+ R+V M K
Sbjct: 274 AT--YVQDLQVDEAV--KLFKKMPHKDSVSWTTIINGYIRVGKLDEA---RQVYNQMPCK 326
Query: 311 KM 312
+
Sbjct: 327 DI 328
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 113 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 172
+N I K GK+ +A+++F NM +K+++T+ +MI+ LA + R+A +F +M
Sbjct: 20 HNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSL--- 76
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
N +++ +++ H +VE F++M R + MI R G L++A
Sbjct: 77 -RNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFS-----WALMITCYTRKGKLEKAR 130
Query: 233 KLLRRMPFEANAAIWGSLLA 252
+LL +P + + A W +++A
Sbjct: 131 ELLELVPDKLDTACWNAMIA 150
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G + +AR F+++ EKN++S+ ++ GYA+ + EA LF + +
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 122
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +GA+ GE IH + + G + + NALI MY++ G I A QV
Sbjct: 123 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 182
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++++VI+WT+MI G A HG AL+MF +M KPNEIT++A+LSAC HVG++
Sbjct: 183 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 242
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+++FN M +GI P++E Y CM+DLLGR+G L EA + + MP A+A +W +LL
Sbjct: 243 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 302
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+ ELG A + +++ EP + Y +LSN++A G+W + KIRK M++ + K
Sbjct: 303 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 362
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS+IEV RVH F G+TSHP ++YQ L ++ ++K
Sbjct: 363 AGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 402
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKP 73
M A A G ++++R +FE M E NV+SWT +I Y Q + + EAI LF +
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK-------- 52
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
M++A C + N+LI MYA+SG++ A + F
Sbjct: 53 ----MISASVNC--------------------------VGNSLISMYARSGRMEDARKAF 82
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + K+++++ ++ G A + EA +F+ + + + TF ++LS +G +
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + ++K Y K Q C +I + R G ++ A ++ M + N W S+
Sbjct: 143 KGEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSM 197
Query: 251 LAASNIYG 258
+ +G
Sbjct: 198 ITGFAKHG 205
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 217/344 (63%), Gaps = 3/344 (0%)
Query: 19 YAKV-GDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEI 76
Y+K G + R +FE + +++ W T+I+G++Q D + I FR MQ PD+
Sbjct: 288 YSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDC 347
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFEN 135
+ + SAC+ L + +G+ +H + + V +NNAL+ MY+K G + A +VF+
Sbjct: 348 SFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
M ++++ +MIAG A HG+ E+L +F M + + PN ITFIA+LSAC H G VE G
Sbjct: 408 MPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG 467
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
++YFN+MK R+ IEP+ E Y CMIDLLGRAG L+EAE+++ MPF + W +LL A
Sbjct: 468 QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 315
+G+VEL A ++LEP+N+ Y +LSN+YA RW E+ ++++MR+ GVKK PGC
Sbjct: 528 KHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587
Query: 316 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
S+IE+ K+VH FVA DTSHP ++ + +I +MK A ++ +
Sbjct: 588 SWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPD 631
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA Y+K G++++AR +F+ M E N++S ++IAGYAQ E++ LF M +++
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ I +A LSAC G VE G+ N + E++ + + +ID+ ++GK+ +A +
Sbjct: 446 PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAER 505
Query: 132 VFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKP 174
+ E M N I W T++ HG L +A + F ++E P
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+NT++ YAK ++ AR +F+ + + +++S+ TLIA YA + A+ LF ++
Sbjct: 78 YNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRF 137
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D + + AC V L +H ++ G + +NNA++ Y++ G + +A +
Sbjct: 138 GLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARR 195
Query: 132 VFENMKN---KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA-CC 187
VF M + ++W MI H G EA+++F M R +K + T ++L+A C
Sbjct: 196 VFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTC 255
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPFEANAAI 246
LV G F+ M + G +IDL + AG + E K+ + + +
Sbjct: 256 VKDLV--GGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA-APDLVL 312
Query: 247 WGSLLAASNIYGDV 260
W ++++ + Y D+
Sbjct: 313 WNTMISGFSQYEDL 326
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 213/343 (62%), Gaps = 8/343 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K + +A +FE++ EK++ SW ++I+ + Q + + LF +M +
Sbjct: 250 NALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 309
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-----NTIVP---LNNALIDMYAKSG 124
PD + + L AC+ L A+ G IH Y+ GL N V ++NA++DMYAK G
Sbjct: 310 PDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCG 369
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ AL++F++M K V +W MI G +HG EAL MFS+M A KPNE+T + +LS
Sbjct: 370 SMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLS 429
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC H G V GR + M+S +G+ P IE Y C+ID+LGRAG+L++A +++++MP +AN
Sbjct: 430 ACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANP 489
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 304
+W +LL A ++G+ EL E A + +++LEP + G+Y ++SN+Y ++GR+ E ++RK M
Sbjct: 490 VVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTM 549
Query: 305 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 347
++ VKK PGCS+IE+ VH F GD +H + + L LC I
Sbjct: 550 KEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQLCDI 592
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 126/253 (49%), Gaps = 8/253 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G + +A+ +F ++ ++V+ W +I GYA++ +EA+ +FRRM V+ V
Sbjct: 149 SALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVA 208
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + LS A G ++ G+ +H + + G ++ V ++NALIDMY K IG AL +
Sbjct: 209 PSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALII 268
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K + +W ++I+ G L +F +M + + P+ +T +L AC H+ +
Sbjct: 269 FEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAAL 328
Query: 193 ELGRRYFNIM-------KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
GR M G + ++D+ + G + A K+ M + + A
Sbjct: 329 MHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMS-KKDVA 387
Query: 246 IWGSLLAASNIYG 258
W ++ ++G
Sbjct: 388 SWNIMIMGYGMHG 400
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 6/248 (2%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+++ Y+K G + A +F + E+NV ++ +I+G+ ++ +++M++E V
Sbjct: 50 TSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGV 109
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD+ + C ++ V+ IH + + GL V + +AL++ Y K+G + A +
Sbjct: 110 MPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQK 166
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF + + V+ W MI G A G EAL++F RM V P+ T ILS G
Sbjct: 167 VFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGD 226
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G+ I+ + G + + +ID+ G+ ++ +A ++ M E + W S++
Sbjct: 227 LDNGKTVHGIVM-KMGYDSGVSVSNALIDMYGKCKHIGDA-LIIFEMINEKDIFSWNSII 284
Query: 252 AASNIYGD 259
+ GD
Sbjct: 285 SVHEQCGD 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 116/236 (49%), Gaps = 15/236 (6%)
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF-ENMK 137
+A L +CA + G+ +H+ + YG + P +LI+MY+K G++G+A+ VF +
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
++V + +I+G +GL + + +M V P++ TF ++ CC V +E+ +
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEV--MEVKKI 132
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K G+E + +++ + G +++A+K+ + + +W +++ N Y
Sbjct: 133 HGCLLK--MGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWNAMI---NGY 186
Query: 258 GDVELGECALQ-----HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+ + AL+ H+ + P ILS ++A G + + ++ MG
Sbjct: 187 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILS-VFASRGDLDNGKTVHGIVMKMG 241
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 207/332 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L+ AR +F+ + ++VISWT +I+G Q P++A+ +F MQ VK
Sbjct: 250 NAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVK 309
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++ + LSAC LGA+E G W+H YIE+ G+ V + +L+DMYAK G + +L +
Sbjct: 310 PDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSI 369
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K++ +W +I G ALHG GREAL+ F RM + + PNE++FI +L ACCH GLV
Sbjct: 370 FRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLV 429
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G + F MK+ Y + P E YG ++DLLGRAG + EA + + MP WG+LL+
Sbjct: 430 QEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLS 489
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + V+ + L+H+ +LE SG YA+LSNIYA+ RW + ++R +M + G++K
Sbjct: 490 ACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQKE 549
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S IEV+ + EFV G +H + D + +L
Sbjct: 550 PGSSVIEVNGKTSEFVVGQKNHKNVDEICAML 581
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 149/261 (57%), Gaps = 8/261 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y G+ +AR +F+ M ++V+SWT L++ + + + EA+ L +M +V
Sbjct: 152 NALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVV 208
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E + L AC +LGA G+ +H + + + + + NA++DMY K K+ A +V
Sbjct: 209 PNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRV 268
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + + VI+WT MI+GL L +AL++F+ M+++RVKP+++ +LSAC +G +
Sbjct: 269 FDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGAL 328
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR ++ R GIE + ++D+ + G L+ + + R+MP + N + W +L+
Sbjct: 329 ESGRWVHEYIE-RKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLK-NLSSWNALIN 386
Query: 253 ASNIYGDVELGECALQHLIKL 273
++G G AL+H ++
Sbjct: 387 GFALHGH---GREALEHFDRM 404
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAMLAALSACAQLGAVEL----- 93
+ LI+ +P+ A F + + E +PD + A L ACA+LGA
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 94 -GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 152
G +H E+ G +P+ NAL+ +Y G+ G A +VF+ M ++ V++WT +++
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 153 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
G EAL + +M+ V PNE T +L AC +G G+
Sbjct: 191 RGGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAGK 231
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 224/349 (64%), Gaps = 1/349 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y++ DL +A LF+ + K++ +W ++++GY MD+ EA LFR M ++
Sbjct: 318 NALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIE 377
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ + + + L CA++ ++ G+ H YI + G + L N+L++MYA+SGK+ A +
Sbjct: 378 PNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKR 437
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF++++ + +T+T++IAG + G G+ AL +F M + R+KP+++T +A+LSAC H GL
Sbjct: 438 VFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGL 497
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G F M + YGI P +E + CM+DL GRAG L +A+K++ MP+ A+W +L+
Sbjct: 498 VTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLV 557
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G+ E+GE A + L++++P N G Y +++N++A GRW++ ++R MRD+GV+K
Sbjct: 558 GACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRK 617
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 360
PGC++++V FV GDTS + + LY++L + MK A ++ E
Sbjct: 618 APGCTWVDVGSGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDAGYVAGE 666
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 141/283 (49%), Gaps = 13/283 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN +++ YA G A LFE M E N+I+W T+ G Q A+ L +M+
Sbjct: 212 WNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMR 271
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++ D +AM+ L AC+ +GA++LG IH + + + NALI MY++ +
Sbjct: 272 RCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLR 331
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A +F+++K KS+ TW +M++G EA +F M + ++PN +T +IL C
Sbjct: 332 HADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCA 391
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANA 244
V ++ G+ + + R G E + + ++++ R+G + A+++ LRR +
Sbjct: 392 RVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRR----DK 447
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 285
+ SL+A I G+ + +IK ++P A+LS
Sbjct: 448 VTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLS 490
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN++V YA+ G + +A+ +F+ + ++ +++T+LIAGY + A+ LF M
Sbjct: 418 LWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHR 477
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKA 129
+KPD++ M+A LSAC+ G V G + + YG+ V + ++D++ ++G + KA
Sbjct: 478 IKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKA 537
Query: 130 LQVFENMKNK-SVITWTTMIAGLALHG 155
+V +M + + W T++ +HG
Sbjct: 538 KKVITSMPYRPTTAMWATLVGACRIHG 564
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 39 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 98
N + W LI+ Y EA++ +R M + V+PD + L AC + ++ G +H
Sbjct: 106 NPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVH 165
Query: 99 NYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
I YG + ++N+L+ MY K G++ A ++F M + ++W +I+ A GL
Sbjct: 166 ESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLW 225
Query: 158 REALDMFSRMERARVKPNEITFIAILSAC 186
+EA ++F M A + N IT+ I C
Sbjct: 226 KEAFELFEEMRLAGAEVNIITWNTIAGGC 254
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSA----CAQLGAVELGEWIHNYIEQYGLNTIVPLN 113
+A F +++ + A+L ++S+ C L ++ G+ +H + G + L
Sbjct: 20 KAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLV 79
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 173
L+ Y+ + A + N + + W +I+ +GL EAL + M V+
Sbjct: 80 PKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVR 139
Query: 174 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 233
P+ T+ ++L AC ++ GR + + YG + + ++ + G+ G L A +
Sbjct: 140 PDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARR 199
Query: 234 LLRRMPFEANAAIWGSLLA 252
L +MP E +A W +++
Sbjct: 200 LFNQMP-ERDAVSWNGIIS 217
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 208/340 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N + Y+K G L + R +F+ M E++++SWTTL+ Y+Q EA+ F M+ E
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 470
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++ + L +CA L +E G +H + + GL+T + +ALIDMYAK G I +A +V
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 530
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ + N +++WT +I+G A HGL +AL +F RME + +K N +T + +L AC H G+V
Sbjct: 531 FDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 590
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF M+ YG+ P++E Y C+IDLLGR G L +A + +R+MP E N +W +LL
Sbjct: 591 EEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLG 650
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
++G+VELGE A + ++ + P S Y +LSN Y G + + +R VM+D GVKK
Sbjct: 651 GCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKE 710
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S+I V RVH+F +GD HP +Y L ++ ++K
Sbjct: 711 PGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 18/264 (6%)
Query: 19 YAKVGDLNNARALFELMTEKNVIS------WTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
Y+K G L++AR++F+ N I+ W +I+GY+Q EA+ L+ +M +
Sbjct: 313 YSKCGSLHDARSVFD----TNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 368
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQ 131
D + +A A +++ G +H + + GL+ +V +NNA+ D Y+K G + +
Sbjct: 369 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 428
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ + +++WTT++ + LG EAL F M PN+ TF ++L +C +
Sbjct: 429 VFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCF 488
Query: 192 VELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
+E GR+ ++ K+ E IE +ID+ + G + EA K+ ++ + W ++
Sbjct: 489 LEYGRQVHGLLCKAGLDTEKCIES--ALIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAI 545
Query: 251 LAASNIYGDVELGECALQHLIKLE 274
++ Y L E ALQ ++E
Sbjct: 546 ISG---YAQHGLVEDALQLFRRME 566
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K + A +F+ M ++NV SWT +I G + + F M + PD+ A
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A + +C L ++ELG+ +H I G T + ++ +L++MYAK G I + VF M
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ ++W MI+G +GL EA D+F RM+ PN T +++ A + V +G+
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
N S GIE + +ID+ + G L +A +
Sbjct: 291 QNC-ASELGIEGNVLVGTALIDMYSKCGSLHDARSVF 326
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK+G + ++ +F +MTE N +SW +I+G EA LF RM+ P+ +
Sbjct: 212 YAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTL 271
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE-NMK 137
++ A +L V +G+ + N + G+ V + ALIDMY+K G + A VF+ N
Sbjct: 272 VSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFI 331
Query: 138 NKSVIT-WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
N V T W MI+G + G +EAL+++ +M + + + T+ ++ +A ++ GR
Sbjct: 332 NCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGR 391
Query: 197 RYFNIMKSRYGIEPKIEQYGCMI-DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 255
M + G++ + I D + G+L++ K+ RM E + W +L+ A
Sbjct: 392 VVHG-MVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA-- 447
Query: 256 IYGDVELGECAL 267
Y LGE AL
Sbjct: 448 -YSQSSLGEEAL 458
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 63 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMY 120
+++ QV++ ++ L CA+ G++ + +H + + ++ L N +Y
Sbjct: 59 YQQTQVQD-------LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVY 111
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
+K + A VF+ M ++V +WT MI G HGL + F M + + P++ +
Sbjct: 112 SKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 171
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
AI+ +C + +ELG+ + R G I ++++ + G ++++ + M
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT- 229
Query: 241 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 300
E N W ++++ G L A ++++ N A N+Y ++ GK+
Sbjct: 230 EHNQVSWNAMISGCTSNG---LHLEAFDLFVRMK-----NGACTPNMYTLVSVSKAVGKL 281
Query: 301 RKVMRDMGVKKMPGCS 316
V +MG K++ C+
Sbjct: 282 VDV--NMG-KEVQNCA 294
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/307 (45%), Positives = 202/307 (65%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ +V + + G+L AR +F M E++V+SWT +++GYAQ + EA+ LFR M+ V
Sbjct: 168 WSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGV 227
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+AM++ +SAC LG +E G +H YI++ G +V L NALIDMYAK G + A Q
Sbjct: 228 RPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQ 287
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF+A+L+A H G
Sbjct: 288 VFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGW 347
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M N +WG+LL
Sbjct: 348 VDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALL 407
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ ++R+ M G KK
Sbjct: 408 AACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKK 467
Query: 312 MPGCSYI 318
GCS++
Sbjct: 468 TLGCSWV 474
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G L+ A LF + + N + TLI GY++ P++++ LF +M+ V PD L
Sbjct: 43 GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 102
Query: 83 SACAQ----LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------- 121
++ L + + IH + + G + + NALI +YA
Sbjct: 103 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 162
Query: 122 --------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
++G++ A QVF M + V++WT M++G A REAL++F M
Sbjct: 163 ADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREM 222
Query: 168 ERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGR 224
V+P+E+ ++++SAC +G +E G RY + G + +ID+ +
Sbjct: 223 RDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYID----ENGFGWMVSLCNALIDMYAK 278
Query: 225 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
G + A ++ M + W S+++A +G+ E
Sbjct: 279 CGCMDLAWQVFNNME-RKSLITWNSMISACANHGNAE 314
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G + +AR F+++ EKN++S+ ++ GYA+ + EA LF + +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +GA+ GE IH + + G + + NALI MY++ G I A QV
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++++VI+WT+MI G A HG AL+MF +M KPNEIT++A+LSAC HVG++
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+++FN M +GI P++E Y CM+DLLGR+G L EA + + MP A+A +W +LL
Sbjct: 380 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 439
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+ ELG A + +++ EP + Y +LSN++A G+W + KIRK M++ + K
Sbjct: 440 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 499
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS+IEV RVH F G+TSHP ++YQ L ++ ++K
Sbjct: 500 AGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 539
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 14/232 (6%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A +F+ M E+N+++WT +I +AQ+ +AI LF M++ PD + LSAC +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNKSVITW 144
LG + LG+ +H+ + + GL V + +L+DMYAK G + + +VFE M +V++W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 145 TTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
T +I A G +EA+++F +M ++PN +F ++L AC ++ G + ++
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 185
Query: 204 SRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
Y ++ I C +I + R+G +++A K + FE N + +++
Sbjct: 186 --YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIV 234
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 131/248 (52%), Gaps = 9/248 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKP 73
M A A G ++++R +FE M E NV+SWT +I YAQ + + EAI LF +M +++P
Sbjct: 100 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRP 159
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ + + L AC L GE +++Y + G+ ++ + N+LI MYA+SG++ A + F
Sbjct: 160 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 219
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + K+++++ ++ G A + EA +F+ + + + TF ++LS +G +
Sbjct: 220 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 279
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + ++K Y K Q C +I + R G ++ A ++ M + N W S+
Sbjct: 280 KGEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSM 334
Query: 251 LAASNIYG 258
+ +G
Sbjct: 335 ITGFAKHG 342
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 207/332 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W TMV G K+G +++AR LF+ M E+N++SW +++GY + + +A+ +F M+ V
Sbjct: 174 WTTMVGGLVKLGRVDDARELFDGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRARGV 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ A+ AC GA+ G +H ++E+ G+ L A++DMY K G + +A +
Sbjct: 234 DGNAFVAATAVVACTGAGALARGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEAWR 293
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE + + + +W MI G A+HG G +AL++F MER V P+++T + +L+AC H G+
Sbjct: 294 VFEALPARGLTSWNCMIGGFAVHGRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHAGM 353
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V GR YFN + RYGI PK+E YGCM+DL GRAG L+EA+K+++ MP E + + G+L
Sbjct: 354 VSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGALF 413
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS I+GDV+LGE +I+L+P NSG Y +L+N+ A GRW + ++R++M + V K
Sbjct: 414 GASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSK 473
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 343
G S IEV V EF G HP + +Y +
Sbjct: 474 EAGRSVIEVQGEVCEFQCGGLCHPQAEEVYAM 505
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K +V Y K G + A +FE + + + SW +I G+A + +A+ LF M+ E
Sbjct: 273 KLATAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCMIGGFAVHGRGEDALNLFGLMERE 332
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGK 128
V PD++ ++ L+ACA G V G NYI Q YG+ + ++D+Y ++G++ +
Sbjct: 333 GVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEE 392
Query: 129 ALQVFENMK 137
A +V ++M
Sbjct: 393 AKKVIQDMP 401
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 217/343 (63%), Gaps = 1/343 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GY + G ++NA +F+ M ++++ISWT +I G+ + EA+ FR MQ+ V
Sbjct: 128 WNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGV 187
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD +A+++A++AC LGA+ G W+H Y+ V ++N+LID+Y + G + A Q
Sbjct: 188 NPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQ 247
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M+ ++V++W ++I G A +G E+L F +M+R P+ +TF L+AC HVGL
Sbjct: 248 VFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGL 307
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G +YF +MK Y I P+IE YGC++DL RAG L++A ++ MP + N + GSLL
Sbjct: 308 VEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLL 367
Query: 252 AASNIYGD-VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
AA +G+ L E ++++ L+ + NY ILSN+YA G+W + K+R+ M+ +G+K
Sbjct: 368 AACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 427
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 353
K PG S IE+ H F+AGD++H + + ++L I+ ++
Sbjct: 428 KQPGYSSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRL 470
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 36 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 93
T + ++SWT+ I ++ + EA+ F M++ ++P+ I +A LSAC G+ L
Sbjct: 17 TSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGL 76
Query: 94 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT------ 146
G +H Y + GL + V + A++ MY+KSG + KA VF+ +++K+ +TW T
Sbjct: 77 GYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYM 136
Query: 147 -------------------------MIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
MI G G EAL F M+ + V P+ + I+
Sbjct: 137 RNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIS 196
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
++AC ++G + G + S+ + +IDL R G ++ A ++ +M +
Sbjct: 197 AVAACTNLGALSFGLWVHRYVLSQ-DFRNNVRVSNSLIDLYCRCGCVEFARQVFDKME-K 254
Query: 242 ANAAIWGSLL 251
W S++
Sbjct: 255 RTVVSWNSVI 264
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+Q ++++++WT+ I L+ G EA+ FS M A ++PN ITFIA+LSAC
Sbjct: 10 IQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC--- 66
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMID--LLG---RAGYLQEAEKLLRRMPFEANA 244
G G + Y + +E+ M+ +LG ++G+L++A +L+ + N+
Sbjct: 67 GNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKA-RLVFDYIEDKNS 125
Query: 245 AIWGSLL 251
W +++
Sbjct: 126 VTWNTMI 132
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G + +AR F+++ EKN++S+ ++ GYA+ + EA LF + +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +GA+ GE IH + + G + + NALI MY++ G I A QV
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++++VI+WT+MI G A HG AL+MF +M KPNEIT++A+LSAC HVG++
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+++FN M +GI P++E Y CM+DLLGR+G L EA + + MP A+A +W +LL
Sbjct: 375 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 434
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+ ELG A + +++ EP + Y +LSN++A G+W + KIRK M++ + K
Sbjct: 435 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 494
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS+IEV RVH F G+TSHP ++YQ L ++ ++K
Sbjct: 495 AGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 534
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 14/232 (6%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A +F+ M E+N+++WT +I +AQ+ +AI LF M++ PD + LSAC +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNKSVITW 144
LG + LG+ +H+ + + GL V + +L+DMYAK G + + +VFE M +V++W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 145 TTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
T +I A G +EA+++F +M ++PN +F ++L AC ++ G + ++
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 180
Query: 204 SRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
Y ++ I C +I + R+G +++A K + FE N + +++
Sbjct: 181 --YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIV 229
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 131/248 (52%), Gaps = 9/248 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKP 73
M A A G ++++R +FE M E NV+SWT +I YAQ + + EAI LF +M +++P
Sbjct: 95 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRP 154
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ + + L AC L GE +++Y + G+ ++ + N+LI MYA+SG++ A + F
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 214
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + K+++++ ++ G A + EA +F+ + + + TF ++LS +G +
Sbjct: 215 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 274
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + ++K Y K Q C +I + R G ++ A ++ M + N W S+
Sbjct: 275 KGEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSM 329
Query: 251 LAASNIYG 258
+ +G
Sbjct: 330 ITGFAKHG 337
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 215/326 (65%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G +N+A +FE M +K+ ++W++++AGY Q EA+ L+RR Q +++ ++ +
Sbjct: 209 YAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTL 268
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ + AC+ L A+ G+ +H I + G + V + ++ +DMYAK G + ++ +F ++
Sbjct: 269 SSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 328
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K++ W T+I+G A H +E + +F +M++ + PNE+TF ++LS C H GLVE GRR+
Sbjct: 329 KNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 388
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F +M++ YG+ P + Y CM+D+LGRAG L EA +L++ +PFE A+IWGSLLA+ +
Sbjct: 389 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCK 448
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
++EL E A + L +LEP N+GN+ +LSNIYA +W E K RK++RD VKK+ G S+I
Sbjct: 449 NLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWI 508
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
++ +VH F G++SHP + +L
Sbjct: 509 DIKDKVHIFRVGESSHPRIREICTML 534
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 136/242 (56%), Gaps = 6/242 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y+K G + AR +F+ M E++++SW T+I Y + +EA+ +F M+ E K
Sbjct: 102 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFK 161
Query: 73 PDEIAMLAALSAC-AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
E + + LSAC A A+E + +H + L+ + + AL+D+YAK G I A+Q
Sbjct: 162 FSEFTISSVLSACGANCDALECKK-LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQ 220
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-G 190
VFE+M++KS +TW++M+AG EAL ++ R +R ++ N+ T +++ AC ++
Sbjct: 221 VFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 280
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+E + + I KS +G + +D+ + G L+E+ + + E N +W ++
Sbjct: 281 LIEGKQMHAVIRKSGFGSNVFVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNIELWNTI 337
Query: 251 LA 252
++
Sbjct: 338 IS 339
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 60 ITLFRRMQVENVKP----DEIAMLAA------LSACAQLGAVELGEWIHNYIEQYGLNTI 109
I++F + E + P DE ++ A L CA+ GAV + H + L
Sbjct: 38 ISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGD 97
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
V L+N LI+ Y+K G + A QVF+ M +S+++W TMI + + EALD+F M
Sbjct: 98 VTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRN 157
Query: 170 ARVKPNEITFIAILSAC-CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
K +E T ++LSAC + +E + + MK+ + + ++DL + G +
Sbjct: 158 EGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGT--ALLDLYAKCGMI 215
Query: 229 QEAEKLLRRMPFEANAAIWGSLLA 252
+A ++ M + ++ W S++A
Sbjct: 216 NDAVQVFESMQ-DKSSVTWSSMVA 238
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 211/321 (65%), Gaps = 2/321 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ Y+K G+L ++R +F+ M ++ I+W I+ YAQ +EAI+LF M+ V
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVD 317
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+++ + A LSACA +GA++LG+ + Y GL + + ALIDMYAK G + A +V
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
F +M K+ +W MI+ LA HG +EAL +F RM E +PN+ITF+++LSAC H G
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G R F++M + +G+ PKIE Y CM+DLL RAG+L EA ++ +MP + + G+L
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGAL 497
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+A +V++GE +Q L++L+P NSGNY I S IY L W+++ ++R +MR+ GV
Sbjct: 498 HSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVT 557
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS+IEV ++ EF++GD
Sbjct: 558 KTPGCSWIEVGNQLREFLSGD 578
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N+MV Y + G+ AR +F+ +TEK+++SW +L++GYA++ EA+ +F R++ E+
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+++++ L AC +LG +ELG W+ ++ + G+ + +ALI MY+K G++ + +
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRR 275
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M ++ ITW I+ A +G+ EA+ +F M+ V PN++T A+LSAC +G
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG++ R G++ I +ID+ + G L+ A+++ MP N A W +++
Sbjct: 336 LDLGKQMDEYATHR-GLQHDIFVATALIDMYAKCGSLESAQRVFNDMP-RKNDASWNAMI 393
Query: 252 AASNIYG 258
+A +G
Sbjct: 394 SALASHG 400
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT S L++ YA F +M +W D P +
Sbjct: 65 FTYSTLIFSHITPHPNDYA-----------FNIMLRATTTTW---------HDYP-LTLH 103
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L+ +M+ N+ P+ ACA L + + H + + GL+ N+++ MY
Sbjct: 104 LYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYF 163
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFI 180
+ G+ G A +VF+ + K +++W ++++G A G REA+++F R+ E + +P+E++ +
Sbjct: 164 RCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRM 238
++L AC +G +ELGR + R G+ K+ Y +I + + G L + ++ M
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVER-GM--KVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 239 PFEANAAIWGSLLAA 253
P + W + ++A
Sbjct: 281 P-SRDFITWNAAISA 294
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 210/335 (62%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K N+++ Y K+G L+ A LFE M ++++SW +++ + + + LF M+
Sbjct: 257 KVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRA 316
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD+ M+A L AC G E IH YI + G N + + AL+++YAK G++ +
Sbjct: 317 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 376
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+FE +K++ I WT M+AG A+H GREA+ +F M + V+ + +TF +LSAC H
Sbjct: 377 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 436
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G++YF IM Y +EP+++ Y CM+DLLGR+G L++A +L++ MP E ++ +WG+
Sbjct: 437 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 496
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A +YG+VELG+ + L+ L+P + NY +LSNIY+ G W ++ K+R +M++ +
Sbjct: 497 LLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 556
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+ PGCS+IE ++H FV GD HP D ++ L
Sbjct: 557 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKL 591
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 157/308 (50%), Gaps = 28/308 (9%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V+ Y K+G +A+ LF+ M K+++SW +L++G + + F RM+ E+ +
Sbjct: 158 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 217
Query: 73 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+E+ +L+ +SACA +GA++ G+ +H + + G++ + N+LI+MY K G + A Q
Sbjct: 218 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 277
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M +S+++W +M+ +G + +D+F+ M+RA + P++ T +A+L AC G
Sbjct: 278 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG- 336
Query: 192 VELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
LGR+ +I R G I +++L + G L +E + + + + W +
Sbjct: 337 --LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTA 393
Query: 250 LLAASNIYG---------------DVELGECALQHLIKLEPHN------SGNYAILSNIY 288
+LA ++ VE+ HL+ H+ + I+S +Y
Sbjct: 394 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 453
Query: 289 AILGRWNE 296
+ R +
Sbjct: 454 RVEPRLDH 461
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 112 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ER 169
+ + L+ MY K G A ++F+ M NK +++W ++++GL+ G L+ F RM E
Sbjct: 156 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 215
Query: 170 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 229
R +PNE+T ++++SAC +G ++ G+ ++ + G+ K + +I++ G+ G+L
Sbjct: 216 GR-QPNEVTLLSVVSACADMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLD 273
Query: 230 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 263
A +L MP + + W S++ N G E G
Sbjct: 274 AASQLFEEMPVRSLVS-WNSMVVIHNHNGYAEKG 306
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 207/331 (62%), Gaps = 1/331 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W M+ GY K + A A+F+ MT KN+++W +I+GY + +P + + LFR M E
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
++P+ + +AL C++L A++LG IH + + L V +LI MY K G++G A
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++FE MK K V+ W MI+G A HG +AL +F M +++P+ ITF+A+L AC H G
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV +G YF M Y +EP+ + Y CM+DLLGRAG L+EA KL+R MPF +AA++G+L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L A ++ +VEL E A + L++L N+ Y L+NIYA RW + ++RK M++ V
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
K+PG S+IE+ +VH F + D HP+ D ++
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 129/267 (48%), Gaps = 13/267 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M++ Y + + A++ F+ M K+ SW T+I GYA+ + +A LF M +N
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN- 185
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
E++ A +S + G +E ++ + + +V A+I Y K+ K+ A
Sbjct: 186 ---EVSWNAMISGYIECGDLEKAS---HFFKVAPVRGVVAW-TAMITGYMKAKKVELAEA 238
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F++M NK+++TW MI+G + + L +F M ++PN + L C +
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++LGR+ I+ S+ + + +I + + G L +A KL M + + W ++
Sbjct: 299 ALQLGRQIHQIV-SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAM 356
Query: 251 LAASNIYGDVELGECALQHLI--KLEP 275
++ +G+ + C + +I K+ P
Sbjct: 357 ISGYAQHGNADKALCLFREMIDNKIRP 383
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 107 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFS 165
+ I PLN +I +SG I AL+VF M+ K+ ITW +++ G++ EA +F
Sbjct: 59 DQIFPLNK-IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 166 RMERARVKPNEITFIAILSACCHVGLV--ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 223
+ +P+ ++ +LS C+V V E + +F+ M + + MI
Sbjct: 118 EIP----EPDTFSYNIMLS--CYVRNVNFEKAQSFFDRMPFK-----DAASWNTMITGYA 166
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 275
R G +++A +L M E N W ++++ GD+E H K+ P
Sbjct: 167 RRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKA----SHFFKVAP 213
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 211/321 (65%), Gaps = 2/321 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +++ Y+K G+L ++R +F+ M ++ I+W I+ YAQ +EAI+LF M+ V
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVD 317
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+++ + A LSACA +GA++LG+ + Y GL + + ALIDMYAK G + A +V
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 190
F +M K+ +W MI+ LA HG +EAL +F RM E +PN+ITF+++LSAC H G
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G R F++M + +G+ PKIE Y CM+DLL RAG+L EA ++ +MP + + G+L
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGAL 497
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+A +V++GE +Q L++L+P NSGNY I S IY L W+++ ++R +MR+ GV
Sbjct: 498 HSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVT 557
Query: 311 KMPGCSYIEVSKRVHEFVAGD 331
K PGCS+IEV ++ EF++GD
Sbjct: 558 KTPGCSWIEVGNQLREFLSGD 578
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N+MV Y + G+ AR +F+ +TEK+++SW +L++GYA++ EA+ +F R++ E+
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+++++ L AC +LG +ELG W+ ++ + G+ + +ALI MY+K G++ + +
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRR 275
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M ++ ITW I+ A +G+ EA+ +F M+ V PN++T A+LSAC +G
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++LG++ R G++ I +ID+ + G L+ A+++ MP N A W +++
Sbjct: 336 LDLGKQMDEYATHR-GLQHDIFVATALIDMYAKCGSLESAQRVFNDMP-RKNDASWNAMI 393
Query: 252 AASNIYG 258
+A +G
Sbjct: 394 SALASHG 400
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT S L++ YA F +M +W D P +
Sbjct: 65 FTYSTLIFSHITPHPNDYA-----------FNIMLRATTTTW---------HDYP-LTLH 103
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
L+ +M+ N+ P+ ACA L + + H + + GL+ N+++ MY
Sbjct: 104 LYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYF 163
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFI 180
+ G+ G A +VF+ + K +++W ++++G A G REA+++F R+ E + +P+E++ +
Sbjct: 164 RCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 181 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRM 238
++L AC +G +ELGR + R G+ K+ Y +I + + G L + ++ M
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVER-GM--KVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 239 PFEANAAIWGSLLAA 253
P + W + ++A
Sbjct: 281 P-SRDFITWNAAISA 294
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 224/335 (66%), Gaps = 5/335 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ GYAK G+++ +R LF+ M + +SW ++I+GY + + EA+ LF +MQVE +
Sbjct: 201 NSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFE 260
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKAL 130
E M++ L+ACA LGA++ G+W+H+YI++ + LN IV A+IDMY K G + A+
Sbjct: 261 VSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVV--TAIIDMYCKCGSVENAV 318
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEITFIAILSACCHV 189
+VFE + + W ++I GLA++G REA + FS++E +++ KP+ ++FI +L+AC H+
Sbjct: 319 EVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHL 378
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G + R YF +M ++Y IEP I+ Y C++D+LG+AG L+EAE+L++ MP + +A IWGS
Sbjct: 379 GAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGS 438
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL++ + +V++ A Q + +L P ++ Y ++SN++A ++ E+ + R +M++
Sbjct: 439 LLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLT 498
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
+K PGCS IE+ VHEF+AG HP +Y +L
Sbjct: 499 EKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLL 533
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 37/264 (14%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
G++N A LF M N+ SW T+I +++ P AI+LF M ++P + +
Sbjct: 75 GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVF 134
Query: 83 SACAQLGAVELGEWIHNYIEQYGL-------NTIVPLN---------------------- 113
A AQLG G +H + + GL NTI+ +
Sbjct: 135 KAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYD 194
Query: 114 ------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
N++I YAK G+I ++ +F++M ++ ++W +MI+G +G EAL++F++M
Sbjct: 195 HDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM 254
Query: 168 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ + +E T +++L+AC H+G ++ G+ + +K R E + +ID+ + G
Sbjct: 255 QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIK-RNHFELNVIVVTAIIDMYCKCGS 313
Query: 228 LQEAEKLLRRMPFEANAAIWGSLL 251
++ A ++ P + W S++
Sbjct: 314 VENAVEVFETCP-RRGLSCWNSII 336
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 97 IHNYIEQYGLNTIVPL--NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
I+ +I + GL T+ P+ AL + SG I A ++F M N ++ +W T+I +
Sbjct: 47 IYPHIIKTGL-TLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRS 105
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
+ A+ +F M ++++P +T+ ++ A +G G + + + G++ +Q
Sbjct: 106 STPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRV-VKLGLQN--DQ 162
Query: 215 YGC--MIDLLGRAGYLQEAEKLL 235
+ C +I + G + EA ++
Sbjct: 163 FICNTIIYMYANGGLMSEARRVF 185
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 210/339 (61%), Gaps = 6/339 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+N ++ Y+K AR++F+ + E+NV++WT +I G+AQ N+A+ LF M E
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508
Query: 70 --NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDMYAKSGK 125
V P+ + L ACA L A+ +G+ IH Y+ ++ ++ + N LIDMY+K G
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A VF++M KS I+WT+M+ G +HG G EALD+F +M +A P++ITF+ +L A
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H G+V+ G YF+ M + YG+ P+ E Y C IDLL R+G L +A + ++ MP E A
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 688
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+W +LL+A ++ +VEL E AL L+++ N G+Y ++SNIYA GRW + +IR +M+
Sbjct: 689 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 748
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK PGCS+++ K F GD SHP ++Y +L
Sbjct: 749 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALL 787
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 32/272 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKN----VISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN MVAGY++ G+ A LF+ M ++N V++WT +IAGY+Q +EA+ LFR+M
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----------VPLNNALI 117
P+ + +++ LSACA LGA G IH Y + L T+ + + NALI
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453
Query: 118 DMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVK 173
DMY+K A +F++ ++ ++V+TWT MI G A +G +AL +F M E V
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513
Query: 174 PNEITFIAILSACCHVGLVELGR-------RYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
PN T IL AC H+ + +G+ R+ S Y + C+ID+ + G
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLIDMYSKCG 567
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ A + M + +A W S++ ++G
Sbjct: 568 DVDTARHVFDSMS-QKSAISWTSMMTGYGMHG 598
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 64/334 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQV- 68
N +VA Y++ G L A +F+ +T++ +VISW ++++ + + A+ LF +M +
Sbjct: 194 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 253
Query: 69 -----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK- 122
N + D I+++ L AC L AV + +H + G V + NALID YAK
Sbjct: 254 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 313
Query: 123 ------------------------------SGKIGKALQVFENMKNKS----VITWTTMI 148
SG A ++F+NM+ ++ V+TWT +I
Sbjct: 314 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVI 373
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG--------RRYFN 200
AG + G EAL++F +M + PN +T I++LSAC +G G +
Sbjct: 374 AGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLL 433
Query: 201 IMKSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIYG 258
+ + +G E + + Y +ID+ + + A + +P E N W ++ YG
Sbjct: 434 TLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYG 493
Query: 259 DVELGECALQHLIKL--EPHNSGNYAILSNIYAI 290
D AL+ +++ EP Y + N Y I
Sbjct: 494 D---SNDALKLFVEMISEP-----YGVAPNAYTI 519
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+VA Y G + A + E +T + W LI + + + + AI + RM +PD
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC +L + G H I G + V + NAL+ MY++ G + +A +F+
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 135 NMKNK---SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKP-NE----ITFIAILSA 185
+ + VI+W ++++ ALD+FS+M KP NE I+ + IL A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 186 CCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C + V + + N + R G P + +ID + G ++ A K+ M F+ +
Sbjct: 275 CGSLKAVPQTKEVHGNAI--RNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DV 331
Query: 245 AIWGSLLAASNIYGDVE 261
W +++A + G+ E
Sbjct: 332 VSWNAMVAGYSQSGNFE 348
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 204/315 (64%), Gaps = 4/315 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +MQ
Sbjct: 215 WNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGE 274
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDMYAKSGKIGK 128
KPD + ML+ LSACA G ++ G +H ++ + I P L NALIDMYAK G +
Sbjct: 275 KPDTVTMLSLLSACADSGDLDAGRRLHGFLSGR-FSRIGPTTALGNALIDMYAKCGSMTS 333
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
AL+VF M++K+V TW ++I GLALHG E++ +F +M + VKP+EITF+A+L+AC H
Sbjct: 334 ALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSH 393
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G+V+ G YF++M+ RY IEP I+ YGCM+D+L R G L+EA + + M E N IW
Sbjct: 394 GGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWR 453
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL A I+G++EL E A + L+K SG++ +LSNIYA +G W S +RK+M D G
Sbjct: 454 TLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSG 513
Query: 309 VKKMPGCSYIEVSKR 323
V K G + I+ S +
Sbjct: 514 VNKEAGRAVIDSSSK 528
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-------QVENVKPDE 75
G +AR +F+ + + + TLI G A D P +A++++ RM + ++PD+
Sbjct: 56 GGTAHARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDK 115
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
L ACA +GA E G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 116 RTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDG 175
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+ + W+ MI+G A G A ++F + + VK + +++ +++A +G +
Sbjct: 176 EAREDAVAWSAMISGFARRGDIGAARELF---DESPVK-DLVSWNVMITAYAKLGDMAPA 231
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLA 252
R F+ R + + MI R G ++A +L +M + + SLL+
Sbjct: 232 RELFDGAPDR-----DVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLS 286
Query: 253 ASNIYGDVELGE 264
A GD++ G
Sbjct: 287 ACADSGDLDAGR 298
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 214/350 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V+ YA+ G + A FE + K+ ISW LI+G+AQ +A+ +F +M ++
Sbjct: 555 NALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLE 614
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+A+SA A + ++ G+ IH I + G ++ + ++NALI YAK G I A +
Sbjct: 615 ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M K+ ++W MI G + HG G EA+++F +M++ PN +TF+ +LSAC HVGLV
Sbjct: 675 FCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLV 734
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G YF M +G+ PK Y C++DL+ RAG+L A K + MP E +A IW +LL+
Sbjct: 735 TKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLS 794
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++ +VE+GE A QHL++LEP +S Y +LSN+YA+ G+W+ + R++MR+ GVKK
Sbjct: 795 ACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PG S+IEV VH F GD HP D++Y+ L ++N + + Q+ +S
Sbjct: 855 PGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYS 904
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ YAK G L+ A + +TE +V+SWT LI+GYAQ + EA+ F+ M ++
Sbjct: 454 SVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQ 513
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D I +A+SACA + A+ G IH G + + + NAL+ +YA+ G+I +A
Sbjct: 514 SDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLE 573
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + K I+W +I+G A G +AL +F++M RA+++ + TF + +SA ++ +
Sbjct: 574 FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANI 633
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G++ ++ R G + IE +I + G +++A + MP E N W +++
Sbjct: 634 KQGKQIHAMIIKR-GFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKNDVSWNAMIT 691
Query: 253 ASNIYG 258
+ +G
Sbjct: 692 GYSQHG 697
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 8/230 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y +GDL+ +FE M ++V SW +I+G+ + N + LF M ENV
Sbjct: 49 NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVS 108
Query: 73 PDEIAMLAALSACA--QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
P EI+ + L AC+ ++G + E IH I +GL ++N LI +YAK+G I A
Sbjct: 109 PTEISFASVLRACSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISAR 167
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+N+ K ++W MI+G + +G EA+ +F M A + P F ++LS C +
Sbjct: 168 KVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIK 227
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRM 238
L ++G + + + +YG +E Y C ++ L R AEK+ +M
Sbjct: 228 LFDVGEQ-LHALVFKYG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + +AR +F+ + K+ +SW +I+G++Q EAI LF M +
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + LS C ++ ++GE +H + +YG + + NAL+ +Y++ A +V
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKV 270
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++K +++ ++I+GLA G AL++F++M+R +KP+ +T ++LSAC G +
Sbjct: 271 FSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGAL 330
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G + + + + GI + G ++DL ++ A ++ E N +W +L
Sbjct: 331 CKGEQLHSYV-IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVMLV 388
Query: 253 A 253
A
Sbjct: 389 A 389
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y+++ + +A +F M K+ +S+ +LI+G AQ + A+ LF +M+ + +K
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + LSACA GA+ GE +H+Y+ + G+++ + + AL+D+Y I A ++
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + ++V+ W M+ E+ +F +M+ + PN+ T+ +IL C VG +
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG + + ++K+ G + + +ID+ + G L A +LR + E + W +L+
Sbjct: 432 DLGEQIHTQVIKT--GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALI 488
Query: 252 AASNIYGDVELGECALQHL 270
+ Y L AL+H
Sbjct: 489 SG---YAQHNLFAEALKHF 504
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y D+ A +F +NV+ W ++ + ++D +E+ +FR+MQ++ + P++
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L C +GA++LGE IH + + G V + + LIDMYAK GK+ A + +
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE 478
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V++WT +I+G A H L EAL F M ++ + I F + +SAC + + GR+
Sbjct: 479 DDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ- 537
Query: 199 FNIMKSRY--GIEPKIEQYGCMIDLLGRAGYLQEA 231
I Y G + ++ L R G ++EA
Sbjct: 538 --IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L C G++ + +H I + G L N L+D+Y G + ++VFE+M N+SV
Sbjct: 17 LDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSV 76
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+W +I+G + LD+FS M V P EI+F ++L AC
Sbjct: 77 RSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRAC 121
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 202/314 (64%), Gaps = 2/314 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +MQ
Sbjct: 215 WNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGE 274
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G ++ G +H ++ + L NALIDMYAK G + A
Sbjct: 275 KPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSA 334
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
L+VF M++K+V TW ++I GLALHG E++ +F +M + VKP+EITF+A+L+AC H
Sbjct: 335 LEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHG 394
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ G YF++M+ RY IEP I+ YGCM+D+L R G L+EA + + M E N IW +
Sbjct: 395 GMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRT 454
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL A I+G++EL E A + L+K SG++ +LSNIYA +G W S +RK+M D GV
Sbjct: 455 LLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGV 514
Query: 310 KKMPGCSYIEVSKR 323
K G + I+ S +
Sbjct: 515 NKEAGRAVIDSSSK 528
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-------QVENVKPDE 75
G +AR +F+ + + + TLI G A D P +A++++ RM + ++PD+
Sbjct: 56 GGTAHARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDK 115
Query: 76 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 135
L ACA +GA E G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 116 RTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDG 175
Query: 136 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 195
+ + W+ MI+G A G A ++F + + VK + +++ +++A +G +
Sbjct: 176 EAREDAVAWSAMISGFARRGDIGAARELF---DESPVK-DLVSWNVMITAYAKLGDMAPA 231
Query: 196 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLA 252
R F+ R + + MI R G ++A +L +M + + SLL+
Sbjct: 232 RELFDGAPDR-----DVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLS 286
Query: 253 ASNIYGDVELGE 264
A GD++ G
Sbjct: 287 ACADSGDLDAGR 298
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 208/346 (60%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+M++GYA AR +F M E+NV+SW LIAGY Q + EA++LF ++ E+V
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVPLNNALIDMYAKSGKI 126
P + L ACA L + LG H ++ ++G + + N+LIDMY K G +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+ VF M + ++W MI G A +G G EAL++F M + KP+ IT I +LSAC
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G VE GR YF+ M +G+ P + Y CM+DLLGRAG+L+EA+ ++ MP + ++ I
Sbjct: 504 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVI 563
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
WGSLLAA ++ ++ LG+ + L+++EP NSG Y +LSN+YA LG+W + +RK MR
Sbjct: 564 WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRK 623
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GV K PGCS+I++ H F+ D SHP +++ +L + +M+
Sbjct: 624 EGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 135/248 (54%), Gaps = 4/248 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++V G K+G L+ A +LF M E++ +W ++++G+AQ D+ EA+ F M E
Sbjct: 89 WNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGF 148
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E + + LSAC+ L + G +H+ I + + V + +AL+DMY+K G + A +
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M +++V++W ++I +G EALD+F M +RV+P+E+T +++SAC +
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE----ANAAIW 247
+++G+ + + I +D+ + ++EA + MP + I
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 248 GSLLAASN 255
G +AAS
Sbjct: 329 GYAMAAST 336
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 148/289 (51%), Gaps = 40/289 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y+K G++N+A+ +F+ M ++NV+SW +LI + Q EA+ +F+ M V+
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 73 PDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A+++G+ +H ++ L + L+NA +DMYAK +I +A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 132 VFENMK-------------------------------NKSVITWTTMIAGLALHGLGREA 160
+F++M ++V++W +IAG +G EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRY----GIEPKIEQY 215
L +F ++R V P +F IL AC + + LG + + +++K + G E I
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 262
+ID+ + G ++E + R+M E + W +++ A N YG+ L
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 82 LSAC--AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +C ++L A+ + ++H + + G + + + N LID Y+K G + QVF+ M +
Sbjct: 26 LDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 140 SV-------------------------------ITWTTMIAGLALHGLGREALDMFSRME 168
++ TW +M++G A H EAL F+ M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 169 RARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGY 227
+ NE +F ++LSAC + + G + + I KS + + I ++D+ + G
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG--SALVDMYSKCGN 202
Query: 228 LQEAEKLLRRMPFEANAAIWGSLLAA 253
+ +A+++ M + N W SL+
Sbjct: 203 VNDAQRVFDEMG-DRNVVSWNSLITC 227
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 209/338 (61%), Gaps = 7/338 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++ YAK ++ ARA+F+ ++ E++V++WT +I GY+Q N+A+ L M E+
Sbjct: 411 NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 71 --VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL--NNALIDMYAKSGKI 126
+P+ + AL ACA L A+ +G+ IH Y + N VPL +N LIDMYAK G I
Sbjct: 471 CQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNA-VPLFVSNCLIDMYAKCGDI 529
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
G A VF+NM K+ +TWT+++ G +HG G EAL +F M R K + +T + +L AC
Sbjct: 530 GDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYAC 589
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G+++ G YFN MK+ +G+ P E Y C++DLLGRAG L A +L+ MP E +
Sbjct: 590 SHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LL+ I+G VELGE A + + +L +N G+Y +LSN+YA GRW + +IR +MR
Sbjct: 650 WVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRH 709
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK PGCS++E K F GD +HP +YQ+L
Sbjct: 710 KGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 144/266 (54%), Gaps = 24/266 (9%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN MVAGY+++G +A LFE M E+ +V++W+ I+GYAQ EA+ + R+M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL----------NTIVPLNNALI 117
+KP+E+ +++ LS CA +GA+ G+ IH Y +Y + N ++ N LI
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI---NQLI 414
Query: 118 DMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVK 173
DMYAK K+ A +F+++ K + V+TWT MI G + HG +AL++ S M E + +
Sbjct: 415 DMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 174 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
PN T L AC + + +G++ + ++++ P C+ID+ + G + +A
Sbjct: 475 PNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGDIGDAR 533
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYG 258
+ M E N W SL+ ++G
Sbjct: 534 LVFDNM-MEKNEVTWTSLMTGYGMHG 558
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 47/292 (16%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N +VA Y++ G L++AR +F+ M +V+SW ++I YA++ +P A+ +F +M E
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PD+I ++ L CA +G LG+ H + + + + N L+DMYAK G + +A
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANT 285
Query: 132 VFENMKNKSVITWTTMIA-----------------------------------GLALHGL 156
VF NM K V++W M+A G A GL
Sbjct: 286 VFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY--------FNIMKSRYGI 208
G EAL + +M + +KPNE+T I++LS C VG + G+ ++ K+ +G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGD 405
Query: 209 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRM-PFEANAAIWGSLLAASNIYGD 259
E + +ID+ + + A + + P E + W ++ + +GD
Sbjct: 406 ENMVINQ--LIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 15 MVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y +G L++A +L ++ V W +LI Y + N+ ++ F M +
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD AC ++ +V G+ H G + V + NAL+ MY++ G + A +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGL 191
F+ M V++W ++I A G + AL+MFS+M +P++IT + +L C VG
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG+++ + I+ + C++D+ + G + EA + MP + + W +++
Sbjct: 245 RSLGKQFHGFAVTSEMIQ-NMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNAMV 302
Query: 252 AASNIYGDVE 261
A + G E
Sbjct: 303 AGYSQIGRFE 312
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 210/339 (61%), Gaps = 6/339 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+N ++ Y+K AR++F+ + E+NV++WT +I G+AQ N+A+ LF M E
Sbjct: 456 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 515
Query: 70 --NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDMYAKSGK 125
V P+ + L ACA L A+ +G+ IH Y+ ++ ++ + N LIDMY+K G
Sbjct: 516 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 575
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ A VF++M KS I+WT+M+ G +HG G EALD+F +M +A P++ITF+ +L A
Sbjct: 576 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 635
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H G+V+ G YF+ M + YG+ P+ E Y C IDLL R+G L +A + ++ MP E A
Sbjct: 636 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 695
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+W +LL+A ++ +VEL E AL L+++ N G+Y ++SNIYA GRW + +IR +M+
Sbjct: 696 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 755
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
G+KK PGCS+++ K F GD SHP ++Y +L
Sbjct: 756 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALL 794
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 32/272 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKN----VISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN MVAGY++ G+ A LF+ M ++N V++WT +IAGY+Q +EA+ LFR+M
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----------VPLNNALI 117
P+ + +++ LSACA LGA G IH Y + L T+ + + NALI
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460
Query: 118 DMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVK 173
DMY+K A +F++ ++ ++V+TWT MI G A +G +AL +F M E V
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520
Query: 174 PNEITFIAILSACCHVGLVELGR-------RYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
PN T IL AC H+ + +G+ R+ S Y + C+ID+ + G
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLIDMYSKCG 574
Query: 227 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ A + M + +A W S++ ++G
Sbjct: 575 DVDTARHVFDSMS-QKSAISWTSMMTGYGMHG 605
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 64/334 (19%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQV- 68
N +VA Y++ G L A +F+ +T++ +VISW ++++ + + A+ LF +M +
Sbjct: 201 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 260
Query: 69 -----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK- 122
N + D I+++ L AC L AV + +H + G V + NALID YAK
Sbjct: 261 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 320
Query: 123 ------------------------------SGKIGKALQVFENMKNKS----VITWTTMI 148
SG A ++F+NM+ ++ V+TWT +I
Sbjct: 321 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVI 380
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG--------RRYFN 200
AG + G EAL++F +M + PN +T I++LSAC +G G +
Sbjct: 381 AGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLL 440
Query: 201 IMKSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIYG 258
+ + +G E + + Y +ID+ + + A + +P E N W ++ YG
Sbjct: 441 TLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYG 500
Query: 259 DVELGECALQHLIKL--EPHNSGNYAILSNIYAI 290
D AL+ +++ EP Y + N Y I
Sbjct: 501 D---SNDALKLFVEMISEP-----YGVAPNAYTI 526
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+VA Y G + A + E +T + W LI + + + + AI + RM +PD
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC +L + G H I G + V + NAL+ MY++ G + +A +F+
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 135 NMKNK---SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKP-NE----ITFIAILSA 185
+ + VI+W ++++ ALD+FS+M KP NE I+ + IL A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 186 CCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
C + V + + N + R G P + +ID + G ++ A K+ M F+ +
Sbjct: 282 CGSLKAVPQTKEVHGNAI--RNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DV 338
Query: 245 AIWGSLLAASNIYGDVE 261
W +++A + G+ E
Sbjct: 339 VSWNAMVAGYSQSGNFE 355
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 210/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L++A +FE + ++I+ T++I +Q D AI LF M + ++
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + + NAL+ YAK G I A
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 469
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + V++W+ MI GLA HG G+ AL++F RM + PN IT ++L AC H GLV
Sbjct: 470 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 529
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +RYFN MK +GI+ E Y CMIDLLGRAG L +A +L+ MPF+ANA++WG+LL
Sbjct: 530 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG+ A + L LEP SG + +L+N YA G WNE K+RK+M+D +KK
Sbjct: 590 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKE 649
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S++EV +VH F+ GD SHP +Y L ++ M A ++ N
Sbjct: 650 PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPN 696
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G +++AR +F E +E+N +SW L++ Y + DQ +AI +F M +
Sbjct: 46 NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 105
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P E ++AC ++ G +H + + G V NAL+DMY K G++ A
Sbjct: 106 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 165
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M + V++W +I+G L+G A+++ +M+ + + PN +IL AC G
Sbjct: 166 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 225
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR+ M G ++D+ + +L +A K+ M + +W +L+
Sbjct: 226 FDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALI 283
Query: 252 AASN 255
+ +
Sbjct: 284 SGCS 287
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K+G ++ A +FE M + +V+SW LI+G + AI L +M+ +
Sbjct: 148 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 207
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L ACA GA +LG IH ++ + ++ + L+DMYAK+ + A++V
Sbjct: 208 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 267
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ M ++ +I W +I+G + G EA +F + + + N T A+L +
Sbjct: 268 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK L++A +F+ M+ +++I W LI+G + + +EA ++F ++ E + +
Sbjct: 251 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 310
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ A L + A L A +H E+ G + N LID Y K + A++VFE
Sbjct: 311 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 370
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +I T+MI L+ G A+ +F M R ++P+ ++L+AC + E
Sbjct: 371 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ + R + ++ + G +++AE +P E W +++
Sbjct: 431 GKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGL 488
Query: 255 NIYG 258
+G
Sbjct: 489 AQHG 492
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 125
M+ E V +E A+ L +LG +H G + V + NAL+ MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPD---AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 126 IGKALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
+ A +VF E ++ ++W +++ + +A+ +F M + ++P E F +++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
AC ++ GR+ + M R G E + ++D+ + G + A + +MP +++
Sbjct: 118 ACTGSRNIDAGRQ-VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDV 175
Query: 245 AIWGSLLAASNIYG 258
W +L++ + G
Sbjct: 176 VSWNALISGCVLNG 189
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G + +AR F+++ EKN++S+ ++ GYA+ + EA LF + +
Sbjct: 375 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 434
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +GA+ GE IH + + G + + NALI MY++ G I A QV
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 494
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++++VI+WT+MI G A HG AL+MF +M KPNEIT++A+LSAC HVG++
Sbjct: 495 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 554
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+++FN M +GI P++E Y CM+DLLGR+G L EA + + MP A+A +W +LL
Sbjct: 555 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 614
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+ ELG A + +++ EP + Y +LSN++A G+W + KIRK M++ + K
Sbjct: 615 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 674
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS+IEV RVH F G+TSHP ++YQ L ++ ++K
Sbjct: 675 AGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 714
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 141/259 (54%), Gaps = 13/259 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
NT+++ Y+K GD AR +FE M +++++SW+ +++ +A +AI F M
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAK-SGKIGKA 129
P+E A + AC+ +GE I+ ++ + G L V + LIDM+ K SG +G A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF+ M ++++TWT MI A G R+A+D+F ME + P+ T+ ++LSAC +
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA---GYLQEAEKLLRRMPFEANAAI 246
GL+ LG++ + + R G+ + ++D+ + G + ++ K+ +MP E N
Sbjct: 245 GLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 302
Query: 247 WGSLLAASNIYGDVELGEC 265
W +++ A V+ GEC
Sbjct: 303 WTAIITAY-----VQSGEC 316
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 129/237 (54%), Gaps = 14/237 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL +A +F+ M E+N+++WT +I +AQ+ +AI LF M++ PD + L
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 238
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNK 139
SAC +LG + LG+ +H+ + + GL V + +L+DMYAK G + + +VFE M
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 298
Query: 140 SVITWTTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V++WT +I G +EA+++F +M ++PN +F ++L AC ++ G +
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 199 FNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ Y ++ I C +I + R+G +++A K + FE N + +++
Sbjct: 359 YS-----YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIV 409
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 130/248 (52%), Gaps = 9/248 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKP 73
M A A G ++++R +FE M E NV+SWT +I Y Q + + EAI LF +M +++P
Sbjct: 275 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRP 334
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ + + L AC L GE +++Y + G+ ++ + N+LI MYA+SG++ A + F
Sbjct: 335 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 394
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + K+++++ ++ G A + EA +F+ + + + TF ++LS +G +
Sbjct: 395 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 454
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + ++K Y K Q C +I + R G ++ A ++ M + N W S+
Sbjct: 455 KGEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSM 509
Query: 251 LAASNIYG 258
+ +G
Sbjct: 510 ITGFAKHG 517
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
+ A + M +N PD L +C + +LG+ +H + Q GL + N L
Sbjct: 8 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 67
Query: 117 IDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
I +Y+K G A +FE M NK +++W+ M++ A + + +A+ F M PN
Sbjct: 68 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 127
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC-MIDLLGR-AGYLQEAEK 233
E F A++ AC + +G + + +E + GC +ID+ + +G L A K
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYK 186
Query: 234 LLRRMPFEANAAIW 247
+ +MP E N W
Sbjct: 187 VFDKMP-ERNLVTW 199
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 216/350 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK D+ ++ +F +++K+++SW LI+GYAQ + +EA+ FR MQ+E ++
Sbjct: 457 SALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIR 516
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + LS CA L + L + +H Y+ + GL + V ++N+LI YAK G I +L
Sbjct: 517 PNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYT 576
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE M ++ ++W ++I G+ +H E + +F +M + +KP+ +TF AILSAC H G V
Sbjct: 577 FEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRV 636
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G +YF M + ++P++EQY CM+DLLGRAG+L +A L+ MP + IWGSLL
Sbjct: 637 DEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLG 696
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ +GD L E H+ KL P + G +L+N+Y LG+ E K+R ++DMG+KK
Sbjct: 697 SCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKK 756
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
PGCS+IEV H F+AGD SH D +Y + + ++K A ++ +S
Sbjct: 757 PGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQIYS 806
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 18/366 (4%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ +F N+I W+ +I+ AQ P +A+ LF ++E+ D +
Sbjct: 362 YLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGIL 421
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A L AC+ L G IH + G + V + +AL+D+YAK +G + +VF +
Sbjct: 422 VAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQ 481
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K +++W +I+G A EAL F M+ ++PN +T ILS C H+ ++ L +
Sbjct: 482 KDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEV 541
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ R G+ + +I + G + + +MP E N W S++ ++
Sbjct: 542 HGYL-IRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMP-ERNDVSWNSIILGMGMHS 599
Query: 259 DVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVM-RDMGVK---KM 312
+ ++ ++P + AILS + GR +E K K M D +K +
Sbjct: 600 RTDEMIVLFDKMVASGIKPDHVTFTAILSAC-SHAGRVDEGCKYFKSMVEDFNLKPQLEQ 658
Query: 313 PGCSYIEVSKRVH-----EFVAGDTSHPDFDRLYQIL---CKINGQMKFAEHLQNEFSGV 364
C + + H + + PD DR++ L CK +G AE + N +
Sbjct: 659 YTCMVDLLGRAGHLNQAYDLIMAMPCTPD-DRIWGSLLGSCKNHGDEILAEIVANHIFKL 717
Query: 365 LESDVA 370
+ S V
Sbjct: 718 VPSSVG 723
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 15/283 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK-----NVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
++++ Y K G + NA +F + +K N + W +I+GY ++A+ LF +M
Sbjct: 250 SSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM 309
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
V +KPD M++ S C++ + G+ IH I ++GL + + AL+DMY K G +G
Sbjct: 310 VWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMG 369
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
L++F +N ++I W+ +I+ A G +AL++F + + +A+L AC
Sbjct: 370 TGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACS 429
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
+ L G + + ++ G + ++DL + + ++K+ R+ + + W
Sbjct: 430 SLTLKPEGMQIHG-LATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSW 487
Query: 248 GSLLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAILS 285
+L++ Y E + AL+ L ++ P+ ILS
Sbjct: 488 NALISG---YAQDECADEALKAFRDMQLEEIRPNTVTIACILS 527
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 130/246 (52%), Gaps = 8/246 (3%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N+++ Y K G + +A +FE M E +++SW T+I+G+ + ++ FR M E +
Sbjct: 148 NSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGI 207
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P+ +A ++++ +C+ L ++ G IH + + GL+ L ++LI+MY K G I A
Sbjct: 208 YPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAEN 267
Query: 132 VFENMKNK-----SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+F ++ +K + + W MI+G +G +AL +F +M +KP+ T +++ S C
Sbjct: 268 IFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLC 327
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+ G++ ++ ++G++ I ++D+ + G + K+ RR N +
Sbjct: 328 SESLDIAFGKQIHGLI-FKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQ-NHNLIM 385
Query: 247 WGSLLA 252
W ++++
Sbjct: 386 WSAVIS 391
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAAL-SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 115
++AI ++ +M + VK +E L A L V G IH ++ + G+ V + N+
Sbjct: 90 DDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNS 149
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKP 174
L+ MY K G + A+Q+FE M +++W TMI+G +L F M + P
Sbjct: 150 LLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYP 209
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAE 232
N + ++ + +C + + GR ++ + G++ +E+Y +I++ + G ++ AE
Sbjct: 210 NRVACVSSILSCSSLQSLTHGREIHGVV-VKSGLD--VEEYLVSSLIEMYMKCGSIKNAE 266
Query: 233 ----KLLRRMPFEANAAIWGSLLAA 253
+L + NA IW +++
Sbjct: 267 NIFNSILDKDSVRRNAVIWNVMISG 291
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 219/341 (64%), Gaps = 2/341 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++V YA+ G+L +R +F+ + KN +SW LI+G+A+ + EA+ LF +MQ E
Sbjct: 234 SSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFG 293
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
E A L + + G++E G+W+H ++ + G + + N L+ MYAKSG I A +V
Sbjct: 294 ATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKV 353
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGL 191
F+ + V++ +M+ G A HGLG+EA+++F M ++PN+ITF+++L+AC H GL
Sbjct: 354 FDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGL 413
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G YF +MK +YG+EPK+ Y ++DL GRAG L +A+ + MP E NA IWG+LL
Sbjct: 414 LDEGLYYFELMK-KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AS ++ + E+G A Q +++L+P G + +LSNIYA G+W + K+RK M+D G+KK
Sbjct: 473 GASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKK 532
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
P CS++E+ VH F A D SHP +++Y++ +N ++K
Sbjct: 533 EPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIK 573
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 133/232 (57%), Gaps = 10/232 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ---MDQPNEAITLFRRMQVE 69
N+++ YAK G L AR +F+ M K+V++WT++I GY+Q A+ LF M +
Sbjct: 130 NSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRD 189
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++P+E A+ + + C LG+ G+ IH +YG V + ++L+DMYA+ G++ ++
Sbjct: 190 GLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRES 249
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ +++K+ ++W +I+G A G G EAL +F +M+R E T+ A+L +
Sbjct: 250 RLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTT 309
Query: 190 GLVELGR-RYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRM 238
G +E G+ + ++MKS K+ Y ++ + ++G + +A+K+ R+
Sbjct: 310 GSLEQGKWLHAHMMKSG----KKLVGYVGNTLLHMYAKSGNICDAKKVFDRL 357
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+++PD L C LG ++ G+ +H ++ + + N+++ MYAK G + A
Sbjct: 86 SLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIA 145
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGRE---ALDMFSRMERARVKPNEITFIAILSAC 186
QVF+ M K V+TWT+MI G + G AL +F M R ++PNE +++ C
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
+G G++ +YG + + ++D+ R G L+E+ + + N
Sbjct: 206 GFLGSCVDGKQIHGCC-WKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE-SKNEVS 263
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSG 279
W +L++ G+ GE AL +K++ G
Sbjct: 264 WNALISGFARKGE---GEEALGLFVKMQREGFG 293
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 212/343 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ + DL A+ LF+ M +NVI+WTT++ GY Q Q A+ +F M VE +
Sbjct: 256 WNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGI 315
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+++ L A+ AC+ L + G+ +H I + + + L+++YAK G+I A +
Sbjct: 316 RPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARK 375
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ K K VI+W MIA A HG+G EA+ ++ +M+ KPN++T++ +LSAC H GL
Sbjct: 376 VFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGL 435
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F M I + E Y C+IDL RAG L +A++L+ + E ++ +W +LL
Sbjct: 436 VDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALL 495
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
N +G+ +G+ A ++L++ EP+N+G Y +L NIYA G+W E+ KIR M D G+KK
Sbjct: 496 GGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKK 555
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IEV +VH FV+ D SH + D + +L I+ M+ A
Sbjct: 556 QPGCSWIEVENKVHVFVSRDKSHSESDLINSLLQDIHDIMRMA 598
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 22/253 (8%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++A + G+++ AR LF+ M E+NV++WTT++AG A+ +EA LF M NV
Sbjct: 163 WNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNV 222
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKI 126
++ A +S A+ H E + L +P N +I + + +
Sbjct: 223 ----VSWNAMISGYAR---------NHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDL 269
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+A +F+ M ++VITWTTM+ G AL +F+ M ++PN++TF+ + AC
Sbjct: 270 ERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDAC 329
Query: 187 CHV-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
++ GL E + + I K+ + + IE +++L + G ++ A K+ + E +
Sbjct: 330 SNLAGLSEGQQVHQMICKTSFQFDTFIES--TLMNLYAKCGEIRLARKVF-DLSKEKDVI 386
Query: 246 IWGSLLAASNIYG 258
W ++AA +G
Sbjct: 387 SWNGMIAAYAHHG 399
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 32/263 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
W +VA YA+ G L++ARALF+ +NV++WT L++GYA+ + +EA LF+RM N
Sbjct: 69 WTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERN 128
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA-----LIDMYAKSGK 125
V ++ L A G V + + L +P+ +A L+ +SG
Sbjct: 129 V----VSWNTMLEAYTSAGRVR---------DAWTLFDGMPVRDAGSWNILLAALVRSGN 175
Query: 126 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+ KA ++F+ M ++V+ WTTM+AG+A G EA +F M + N +++ A++S
Sbjct: 176 MDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMP----ERNVVSWNAMISG 231
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
++ F M +R I + MI + L+ A+ L +MP N
Sbjct: 232 YARNHRIDEAHDLFMKMPTR-----DIASWNIMITGFIQDRDLERAQDLFDKMP-RRNVI 285
Query: 246 IWGSLLAASNIYGDVELGECALQ 268
W +++ N Y E ALQ
Sbjct: 286 TWTTMM---NGYLQSMQSETALQ 305
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 222/354 (62%), Gaps = 10/354 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y +VG + AR FE + K+++SWT++I P EA+ LF ++ N++
Sbjct: 488 NAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD IA+++ALSA A L +++ G+ IH ++ + G P+ ++L+DMYA G + + ++
Sbjct: 548 PDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKM 607
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++K + +I WT+MI +HG G EA+ +F +M V P+ ITF+A+L AC H GL+
Sbjct: 608 FHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLM 667
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+R+F IMK Y +EP E Y CM+DLL R+ L+EA + +R MP + ++ +W +LL
Sbjct: 668 VEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLG 727
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +I+ + ELGE A + L++ + NSG YA++SNI+A GRWN+ ++R M+ G+KK
Sbjct: 728 ACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKN 787
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY-------QILCKING---QMKFAEH 356
PGCS+IEV ++H F+A D SHP D +Y ++L K G Q KF H
Sbjct: 788 PGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFH 841
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 144/247 (58%), Gaps = 5/247 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ YAK + + FE M EK++ISWTT+IAGYAQ + EAI LFR++QV+ +
Sbjct: 388 NTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMD 447
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + L AC+ L + IH Y+ + L I+ L NA++++Y + G A +
Sbjct: 448 VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQNAIVNVYGEVGHRDYARRA 506
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE++++K +++WT+MI +GL EAL++F +++ ++P+ I I+ LSA ++ +
Sbjct: 507 FESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G+ +++ + +E I ++D+ G ++ + K+ + + + +W S++
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIAS--SLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMI 623
Query: 252 AASNIYG 258
A+ ++G
Sbjct: 624 NANGMHG 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 3/215 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++A Y K GDL AR LF+ +M +++ +SW ++I+ + + EA++LFRRMQ
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V + +AAL V+LG IH + V + NALI MYAK G++ A
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAE 303
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF +M + ++W T+++GL + L R+AL+ F M+ + KP++++ + +++A G
Sbjct: 304 RVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSG 363
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+ G+ + R G++ ++ +ID+ +
Sbjct: 364 NLLNGKE-VHAYAIRNGLDSNMQIGNTLIDMYAKC 397
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 101/174 (58%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A YAK G + +A +F M ++ +SW TL++G Q + +A+ FR MQ K
Sbjct: 287 NALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++++L ++A + G + G+ +H Y + GL++ + + N LIDMYAK +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYA 406
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
FE M K +I+WTT+IAG A + EA+++F +++ + + + ++L AC
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K G L +A +F+ MTE+ + +W ++ + + EAI L++ M+V V D
Sbjct: 89 YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTF 148
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN--M 136
+ L AC LG LG IH + G V + NALI MY K G +G A +F+ M
Sbjct: 149 PSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMM 208
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
+ + ++W ++I+ G EAL +F RM+ V N TF+A L V+LG
Sbjct: 209 EKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 197 R-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ +KS + + + +I + + G +++AE++ M + W +LL+
Sbjct: 269 GIHGAALKSNHFADVYVAN--ALIAMYAKCGRMEDAERVFASM-LCRDYVSWNTLLSG 323
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 41 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 100
IS TL G ++ +++TL + E A L C + A+ G+ +H
Sbjct: 14 ISVNTLNKG--TLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHAR 71
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ + L+ L L+ MY K G + A++VF+ M +++ TW M+ G EA
Sbjct: 72 LLKSHLSAF--LATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEA 129
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
++++ M V + TF ++L AC +G LG + + G + +I
Sbjct: 130 IELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV-AVKCGFGEFVFVCNALIA 188
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAI-WGSLLAA 253
+ G+ G L A L + E + W S+++A
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 224/349 (64%), Gaps = 5/349 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
WNTM+ G+ + G L A F M+ KNV++WT +I+G+ Q + EA+ +F MQ N
Sbjct: 287 WNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANN 346
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+E ++ L AC++L A+ G+ IH I + + + +ALI+MY+K G++ A
Sbjct: 347 VKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELAR 406
Query: 131 QVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
++F++ + ++ V++W MIA A HG G +A+ +F M+ +P+ +T+IA+LSAC H
Sbjct: 407 KIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSH 466
Query: 189 VGLVELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
GLV+ G + F N+++ R I+ + + + C++DL GRAG LQEA ++ + + +A++W
Sbjct: 467 AGLVDEGLKLFENLVRDR-SIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+LLA N++G ++LG+ + L++ EP N+G Y +LSNIYA G+W E+ +R M+D
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
G+KK PGCS+IEV VH FV GD SH +F+ +Y +L ++ +MK H
Sbjct: 586 GLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGH 634
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G ++ A LFE M E+NV+SW T+I + Q + +EA LF RM +V
Sbjct: 163 WNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV 222
Query: 72 KPDEIAMLAALSACAQL-------------GAVELGEWIHNYIEQYGLNTIVPLN----- 113
M+A LS ++ V I Y + L+ L
Sbjct: 223 -ISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPE 281
Query: 114 ------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
N +I + ++GK+ +A+ F M NK+V+TWT +I+G G EAL +FS M
Sbjct: 282 RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 168 ERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
+ A VKPNE TF+++L AC + + G++ I+ S+ + + +I++ + G
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII-SKTVYQEVADVVSALINMYSKCG 400
Query: 227 YLQEAEKLLRRMPF-EANAAIWGSLLAASNIYG 258
L+ A K+ + W ++AA +G
Sbjct: 401 ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHG 433
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 32/299 (10%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
N ++ K G + AR +FE M +++V+SWT +I GY + EA TLF R ++NV
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKI 126
+ A +S + +E E L +P+ N +I+ YA+ G I
Sbjct: 130 ----VTWTALVSGYVRWNRIE---------EARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+AL +FE M ++V++W T+I EA ++F+RM V I++ +++
Sbjct: 177 DQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV----ISWTTMVAGL 232
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
G ++ R F+ M R + + MI + L EA KL +MP E +
Sbjct: 233 SKNGRIDDARLLFDKMPVR-----NVVSWNTMIIGYAQNMRLDEAFKLFEQMP-ERELSS 286
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
W +++ G +E A+ K+ N + + + + GR E+ KI M+
Sbjct: 287 WNTMITGFIQNGKLER---AVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQ 342
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+Q ++ I + + + N+ V +N LI K GKIG+A QVFE M ++ V++WT
Sbjct: 42 SQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWT 101
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
+I G G+ EA +F R + + N +T+ A++S +E RR F+ M +
Sbjct: 102 AVITGYIKCGMIEEAKTLFDRNDAIK---NVVTWTALVSGYVRWNRIEEARRLFDAMPVK 158
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
I + MI+ R G++ +A L MP E N W +++ A
Sbjct: 159 NVI-----SWNTMIEGYARKGWIDQALDLFEXMP-ERNVVSWNTVITA 200
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 221/360 (61%), Gaps = 4/360 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTMV+GY K GDL AR +F M E+ ++SW+ +I + + +EA+ +F +M
Sbjct: 152 WNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGF 211
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQY---GLNTIVPLNNALIDMYAKSGKIGK 128
KPD + +++ L CA LGA+E G W+H +++ G V L AL+DMY K G + +
Sbjct: 212 KPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNE 271
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
A VF+ +++ V+ W MI GLA++G G+ AL++F RM PNE TF+ L AC H
Sbjct: 272 AWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIH 331
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
G V+ G F M+ +GIEP+ E YGC+ DLLGRAG L+EAE +L MP E +A+ WG
Sbjct: 332 TGRVDEGEDVFRSMRD-HGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWG 390
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+L+++ ++ +V +GE + LI+LEP + G Y L N+YA+ G W ++ +RK+M + G
Sbjct: 391 ALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERG 450
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 368
KK G S+IE + VHEF +GDT HP +Y +L + +++ ++++ +L+ D
Sbjct: 451 AKKETGLSFIEWNGLVHEFRSGDTRHPQTRLIYALLEDMEQRLQLIGYVKDTSQVLLDMD 510
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 213/340 (62%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN +V YA+ G A + FE + K I+W LI+G+AQ EA+ +F +M
Sbjct: 484 WNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA 543
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
K + ++++SA A L ++ G+ IH + + G + ++NALI +Y K G I A
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKM 603
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W T+I + HG G EALD+F +M++ +KP+++TF+ +L+AC HVGL
Sbjct: 604 DFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGL 663
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF M + +GI P+ + Y C++D+LGRAG L A++ + MP A++ +W +LL
Sbjct: 664 VEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLL 723
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ G+W +IRK+M+D GV+K
Sbjct: 724 SACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRK 783
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PG S+IEV VH F GD HP D++Y L +N ++
Sbjct: 784 EPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRL 823
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 140/241 (58%), Gaps = 4/241 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K G L+ A+ + +++ EK+V+SWT++IAGY Q + EA+ F+ MQ + PD I +
Sbjct: 390 YSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGL 449
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+A+SACA + AV G IH + G + V + N L+ +YA+ G +A FE +++
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH 509
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K ITW +I+G A GL EAL +F +M++A K N TF++ +SA ++ ++ G++
Sbjct: 510 KEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI 569
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ ++K+ Y E +I +I L G+ G +++A+ M + N W +++ + +
Sbjct: 570 HARVIKTGYTSETEISN--ALISLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQH 626
Query: 258 G 258
G
Sbjct: 627 G 627
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K GD+ A +F+ NV+ W ++ Y Q+D ++ +F RM V+P++
Sbjct: 289 YVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTY 348
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C G + LGE IH+ + G + + ++ LIDMY+K G + KA ++ + ++
Sbjct: 349 PCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEE 408
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
K V++WT+MIAG H +EAL+ F M+ + P+ I + +SAC + V G +
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI 468
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 231
+ + S Y + I + ++ L R G +EA
Sbjct: 469 HARVYVSGYSADVSI--WNGLVYLYARCGISKEA 500
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 134/250 (53%), Gaps = 7/250 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G + AR +FE ++ ++ +SW +++GYAQ EA+ L+R M V
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + + LSAC + +LG IH + + G + + NALI +Y + A +V
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +M +T+ T+I+G A G G AL +F M+ + + P+ +T ++L+AC VG +
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
G++ + ++K+ ++ +E G ++DL ++G ++EA ++ N +W +L
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIME--GSLLDLYVKSGDIEEALQIFDSGD-RTNVVLWNLML 317
Query: 252 AASNIYGDVE 261
A YG ++
Sbjct: 318 VA---YGQID 324
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 5/259 (1%)
Query: 35 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 93
MT + S+ +AG+ D P + + LF + + + AL AC G L
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
IH GL+ + N LID+YAK G + +A +VFE + + ++W +++G A
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GLG EA+ ++ M R+ V P +ILSAC L +LG R ++ + G +
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG-RLIHVQVYKQGFFSETF 179
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLI 271
+I L R + A+++ M + ++ + +L++ A +GD LG L
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLY-CDSVTFNTLISGHAQCGHGDRALGIFDEMQLS 238
Query: 272 KLEPHNSGNYAILSNIYAI 290
L P + ++L+ A+
Sbjct: 239 GLSPDSVTIASLLAACSAV 257
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 226/361 (62%), Gaps = 5/361 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N +V G ++ G ++NA +F+ + NV+SWT++IA +Q + EA+ LFR MQ+E
Sbjct: 280 NALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG 339
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+ + + L AC + A+ G+ H + + G+ V + +ALIDMYAK G++ +
Sbjct: 340 VKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASR 399
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
F+ M N+++++W +++AG A+HG EA+++F M+R KP+ ++F +LSAC G
Sbjct: 400 LCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGG 459
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L E G YF+ M +G+E ++E Y CM+ LLGR+G L+EA ++++MPFE ++ +WG+L
Sbjct: 460 LTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGAL 519
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L++ ++ V+LGE A + + +LEP N GNY +LSNIYA W E +R +MR G+K
Sbjct: 520 LSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLK 579
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLES 367
K PG S+IE+ +VH +AGD+SHP ++ + L K+ +MK + H V E
Sbjct: 580 KNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQ 639
Query: 368 D 368
D
Sbjct: 640 D 640
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 39/283 (13%)
Query: 13 NTMVAGYAKVGDLNNARALF----ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
+ +++ +A+ G + + LF +L E N++SW +I+G+ + +A+ +F+ M +
Sbjct: 144 SALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHL 203
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------ 122
E +KPD ++ + L A L +G IH Y+ + GL + +ALIDMY K
Sbjct: 204 EGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASE 263
Query: 123 -------------------------SGKIGKALQVFENMK--NKSVITWTTMIAGLALHG 155
+G + AL+VF+ K + +V++WT+MIA + +G
Sbjct: 264 MSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNG 323
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
EAL++F M+ VKPN +T +L AC ++ + G+ + R GI +
Sbjct: 324 KDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAA-HCFSLRNGIFNDVYVG 382
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ID+ + G + + MP N W SL+A ++G
Sbjct: 383 SALIDMYAKCGRMLASRLCFDMMP-NRNLVSWNSLMAGYAMHG 424
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 38 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 97
K IS I +++++ I +F M + + PD + + CA L A++ G+ +
Sbjct: 37 KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96
Query: 98 HNY--IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 155
H + + GL+++V ++L+ MY + + A VF+ + V+T + +I+ A G
Sbjct: 97 HCFALVSGLGLDSVVL--SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKG 154
Query: 156 LGREALDMFSRMERARVKPNEITFIAILSA 185
+E ++F + V+ N +++ ++S
Sbjct: 155 RVKETKELFYQTRDLGVELNLVSWNGMISG 184
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 206/336 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K+ ++ +AR LF+ EK++ SW +I+GY Q +AI+LFR MQ P+ + +
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
LSACAQLGA+ LG+W+H+ + + + ++ ALI MYAK G I +A ++F+ M
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ +TW TMI+G LHG G+EAL++F M + + P +TF+ +L AC H GLV+ G
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
FN M RYG EP ++ Y CM+D+LGRAG+LQ A + + M E +++W +LL A I+
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
D L + L +L+P N G + +LSNI++ + ++ +R+ + + K PG + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
E+ + H F +GD SHP +Y+ L K+ G+M+ A
Sbjct: 664 EIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y+K G + ALF + +++++ +I GY + +++LF+ + + +
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ + L + IH Y + + ++ AL +Y+K +I A ++F+
Sbjct: 322 SSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
KS+ +W MI+G +GL +A+ +F M+++ PN +T ILSAC +G + L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ ++++S E I +I + + G + EA +L M + N W ++++
Sbjct: 439 GKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGY 496
Query: 255 NIYG 258
++G
Sbjct: 497 GLHG 500
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YAK G + AR LF+LMT+KN ++W T+I+GY Q EA+ +F M + P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 75 EIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L L AC+ G V+ G+ I N I +YG V ++D+ ++G + +ALQ
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 134 ENMK-NKSVITWTTMIAGLALH 154
E M W T++ +H
Sbjct: 581 EAMSIEPGSSVWETLLGACRIH 602
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 23/296 (7%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
++ +KFW + +AR +F+ M EK+ I W T+I+GY + + E+I +FR
Sbjct: 162 KMYFKFWR-----------VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 66 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+ E+ + D +L L A A+L + LG IH+ + G + + I +Y+K G
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
KI +F + ++ + MI G +G +L +F + + + T ++++
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
H+ L+ Y +KS + + + + + ++ A KL P E +
Sbjct: 331 VSGHLMLIYAIHGY--CLKSNFLSHASVST--ALTTVYSKLNEIESARKLFDESP-EKSL 385
Query: 245 AIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILSNIYAI----LGRW 294
W ++++ G E + + K E P+ ILS + LG+W
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAM 78
+ +G + AR +F + +V + L+ G++ + P+ ++++F + + ++KP+
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTY 122
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A+SA + G IH G ++ + L + ++ MY K ++ A +VF+ M
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
K I W TMI+G + + E++ +F + + + + T + IL A + + LG +
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR--RMP--FEANAAIWG 248
+ + ++ G I L + G ++ L R R P NA I G
Sbjct: 243 -IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 216/364 (59%), Gaps = 7/364 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y L++AR LF+ + + N+ W LI GYA A+ L+ +M + PD
Sbjct: 116 LVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPD 175
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L ACA L A+E G IH ++ Q G V + ALIDMYAK G +G A +VF+
Sbjct: 176 NFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235
Query: 135 NMKNKS---VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+ + V++W MI G A+HG EALD+F M R KP+ ITF+ +LSAC H GL
Sbjct: 236 KILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGL 294
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+E G +F M Y I+P ++ Y CM+DLLG +G L EA L+ +M ++ +WG+LL
Sbjct: 295 LEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALL 354
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+ I+ +VELGE AL+ LI+LEP ++GNY ILSNIYA G+W K+RK+M D +KK
Sbjct: 355 NSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKK 414
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 368
CS+IEV +VH F++GDTSHP D +Y L ++ G MK ++ + F V + +
Sbjct: 415 SIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDE 474
Query: 369 VASM 372
A+M
Sbjct: 475 KANM 478
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 82 LSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 139
L +C A++ G+ +H + +G +T++ L+++Y + A +F+ +
Sbjct: 82 LQSCIARKAIKPGKQLHAQVCLAGFGFDTVIA--TKLVNLYCVCDSLSSARLLFDRIPKH 139
Query: 140 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-Y 198
++ W +I G A +G A+ ++ +M + P+ TF +L AC + +E GR +
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI--WGSLLAASNI 256
+++++ G E + +ID+ + G + A ++ ++ + W +++ +
Sbjct: 200 EHVVQT--GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAM 257
Query: 257 YG 258
+G
Sbjct: 258 HG 259
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 213/329 (64%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y +VG ++ AR FE + K+++SWT++I P EA+ LF ++ N++
Sbjct: 488 NAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD IA+++ALSA A L +++ G+ IH ++ + G P+ ++L+DMYA G + + ++
Sbjct: 548 PDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKM 607
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++K + +I WT+MI +HG G +A+ +F +M V P+ ITF+A+L AC H GL+
Sbjct: 608 FHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLM 667
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+R+F IMK Y +EP E Y CM+DLL R+ L+EA +R MP + ++ IW +LL
Sbjct: 668 VEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLG 727
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A +I+ + ELGE A + L++ + NSG YA++SNI+A GRWN+ ++R M+ G+KK
Sbjct: 728 ACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKN 787
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
PGCS+IEV ++H F+A D SHP D +Y
Sbjct: 788 PGCSWIEVDNKIHTFMARDKSHPQTDDIY 816
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 144/247 (58%), Gaps = 5/247 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK + FE M EK++ISWTT+IAGYAQ + EAI LFR++QV+ +
Sbjct: 388 NTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMD 447
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + + + L AC+ L + IH Y+ + L I+ L NA++++Y + G I A +
Sbjct: 448 VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQNAIVNVYGEVGHIDYARRA 506
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE++++K +++WT+MI +GL EAL++F +++ ++P+ I I+ LSA ++ +
Sbjct: 507 FESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G+ +++ + +E I ++D+ G ++ + K+ + + + +W S++
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIAS--SLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMI 623
Query: 252 AASNIYG 258
A+ ++G
Sbjct: 624 NANGMHG 630
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 103/174 (59%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++A YAK G + +A +FE M ++ +SW TL++G Q + ++A+ FR MQ K
Sbjct: 287 NALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD++++L ++A + G + G+ +H Y + GL++ + + N L+DMYAK +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
FE M K +I+WTT+IAG A + EA+++F +++ + + + ++L AC
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 3/215 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N ++A Y K GDL AR LF+ +M +++ +SW ++I+ + EA++LFRRMQ
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVG 243
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V + +AAL V+LG IH + + V + NALI MYAK G++ A
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAG 303
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VFE+M + ++W T+++GL + L +AL+ F M+ + KP++++ + +++A G
Sbjct: 304 RVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSG 363
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+ G+ + R G++ ++ ++D+ +
Sbjct: 364 NLLKGKE-VHAYAIRNGLDSNMQIGNTLVDMYAKC 397
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V Y K G L +A +F+ M+E+ + SW L+ + + EAI L++ M+V V D
Sbjct: 85 LVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAID 144
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC LG LG IH + G V + NALI MY K G +G A +F+
Sbjct: 145 ACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFD 204
Query: 135 N--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
M+ + ++W ++I+ G EAL +F RM+ V N TF+A L V
Sbjct: 205 GIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LG ++KS + + + +I + + G +++A ++ M + W +LL
Sbjct: 265 KLGMGIHGAVLKSNHFADVYVAN--ALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLL 321
Query: 252 AA---SNIYGD 259
+ + +Y D
Sbjct: 322 SGLVQNELYSD 332
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 6/198 (3%)
Query: 58 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 117
+++TL + E A L C A+ G+ +H + + L+ L L+
Sbjct: 29 QSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSAF--LATKLV 86
Query: 118 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 177
MY K G + A++VF+ M +++ +W ++ G EA++++ M V +
Sbjct: 87 LMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDAC 146
Query: 178 TFIAILSACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 236
TF ++L AC +G LG + +K YG + +I + G+ G L A L
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYG--EFVFVCNALIAMYGKCGDLGGARVLFD 204
Query: 237 RMPFEANAAI-WGSLLAA 253
+ E + W S+++A
Sbjct: 205 GIMMEKEDTVSWNSIISA 222
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 213/324 (65%), Gaps = 1/324 (0%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G +N A +F +++++++SW ++I AQ D P+ AI +FR+M V + D +++
Sbjct: 482 YAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSI 541
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AALSACA L + G+ IH ++ ++ L V + LIDMYAK G + A+ VF+ MK
Sbjct: 542 SAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKE 601
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
K++++W ++IA HG +++L +F M E++ +P++ITF+ I+S CCHVG V+ G R
Sbjct: 602 KNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVR 661
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+F M YGI+P+ E Y C++DL GRAG L EA + ++ MPF +A +WG+LL AS ++
Sbjct: 662 FFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLH 721
Query: 258 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 317
+VEL + A L+ L+P NSG Y ++SN +A G W K+R +M++ V+K+PG S+
Sbjct: 722 KNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSW 781
Query: 318 IEVSKRVHEFVAGDTSHPDFDRLY 341
IE++K H FV+GD +HP+ +Y
Sbjct: 782 IEINKITHLFVSGDVNHPESSHIY 805
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ Y+K G ++A LF +M+ + ++W +I+GY Q E++ F M V
Sbjct: 274 NSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVL 333
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + L + ++ +E IH YI ++ ++ + L +ALID Y K + A ++
Sbjct: 334 PDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKI 393
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + V+ +T MI+G +GL +AL+MF + + ++ PNEIT ++IL + +
Sbjct: 394 FSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLAL 453
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LGR + + G + + +ID+ + G + A ++ R+ + + W S++
Sbjct: 454 KLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS-KRDIVSWNSMIT 511
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K ++ A+ +F +V+ +T +I+GY +A+ +FR + +
Sbjct: 375 SALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKIS 434
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+EI +++ L L A++LG +H +I + G + + A+IDMYAK G++ A ++
Sbjct: 435 PNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 494
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + +++W +MI A A+D+F +M + + + ++ A LSAC ++
Sbjct: 495 FGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSE 554
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ M ++ + + +ID+ + G L+ A + M E N W S++A
Sbjct: 555 SFGKAIHGFMI-KHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIA 612
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGN 280
A +G ++ C +++ SGN
Sbjct: 613 AYGNHGKLKDSLCLFHEMVE----KSGN 636
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y + G ++ A LF+ + +K+ + W ++ GYA+ + I F M+++ +
Sbjct: 173 SSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQIS 232
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + LS CA ++LG +H + GL+ + N+L+ MY+K G+ A+++
Sbjct: 233 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKL 292
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M +TW MI+G GL E+L F M + V P+ ITF ++L + +
Sbjct: 293 FRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENL 352
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
E R+ + IM R+ I I +ID + + A+K+ +
Sbjct: 353 EYCRQIHCYIM--RHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ 396
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 6/238 (2%)
Query: 19 YAKVGDLNNARALFELMTEK--NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
YA G +N +F + + ++ W ++I+ + +M N+A+ + +M V PD
Sbjct: 76 YAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVS 135
Query: 77 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 136
+ AC L + E++ + + G++ + ++LI Y + GKI A ++F+ +
Sbjct: 136 TFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRV 195
Query: 137 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 196
K + W M+ G A G + FS M ++ PN +TF +LS C L++LG
Sbjct: 196 LQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGV 255
Query: 197 RYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ ++ S E I+ ++ + + G +A KL R M A+ W +++
Sbjct: 256 QLHGLVVVSGLDFEGSIKN--SLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCMISG 310
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 221/361 (61%), Gaps = 4/361 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YAK G + +A +F+ + ++ + W +++A YAQ P+E+I+L R M V+P
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPT 248
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
E ++ +S+ A + + G IH + ++G + + ALIDMYAK G + AL +FE
Sbjct: 249 EATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFE 308
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
++ K V++W +I G A+HGL ALD+F +M R +P+ ITF+ +L+AC L++
Sbjct: 309 RLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITFVGVLAACSRGRLLDE 367
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR +N+M YGI P ++ Y CMIDLLG G L EA L+R M + ++ +WG+LL +
Sbjct: 368 GRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSC 427
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+G+VEL E AL+ LI+LEP +SGNY IL+N+YA G+W K+R+VM D +KK
Sbjct: 428 KIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIA 487
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESDVAS 371
CS+IEV +V+ F+AGD SH + D +Y L ++ G M +A + F V E + S
Sbjct: 488 CSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTS 547
Query: 372 M 372
M
Sbjct: 548 M 548
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 163/358 (45%), Gaps = 25/358 (6%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YA L NAR LF+ + ++N+ W LI GYA + AI L+ +M ++PD
Sbjct: 88 LVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPD 147
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ L AC+ L A+ G IH Y+ + G + + ALIDMYAK G + A +VF+
Sbjct: 148 NFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFD 207
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ + + W +M+A A +G E++ + M V+P E T + ++S+ V +
Sbjct: 208 KIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPY 267
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
GR + R+G + + +ID+ + G ++ A L R+ E W +++
Sbjct: 268 GRE-IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGY 325
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL--GRWNESGK--IRKVMRDMGVK 310
++G L AL K+ + ++ + A GR + G+ ++RD G+
Sbjct: 326 AMHG---LAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT 382
Query: 311 K-----------MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 355
+ C ++ ++ + + PD +L CKI+G ++ AE
Sbjct: 383 PTVQHYTCMIDLLGHCGQLD---EAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAE 437
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
K ++ YAK G + A ALFE + EK V+SW +I GYA A+ LF +M+ E
Sbjct: 285 KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE 344
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGK 128
+ +PD I + L+AC++ ++ G ++N + YG+ V +ID+ G++ +
Sbjct: 345 D-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDE 403
Query: 129 ALQVFENMKNK-SVITWTTMIAGLALHG 155
A + NM K W ++ +HG
Sbjct: 404 AYDLIRNMSVKPDSGVWGALLNSCKIHG 431
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L +C A+ G+ +H G+ L L+ +YA S + A +F+ + +++
Sbjct: 54 LQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNL 113
Query: 142 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN- 200
W +I G A +G A+ ++ +M ++P+ T +L AC + + GR
Sbjct: 114 FLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEY 173
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 258
++KS G E + +ID+ + G + +A ++ ++ +A +W S+LA A N +
Sbjct: 174 VIKS--GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNGHP 230
Query: 259 DVELGEC 265
D + C
Sbjct: 231 DESISLC 237
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 218/352 (61%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+ +AR +F +M ++V++WT +I GY Q + +EAI LFR M
Sbjct: 262 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 321
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS CA L ++ G+ IH + L ++NA+I MYA+SG A +
Sbjct: 322 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 381
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K ITWT+MI LA HG G EA+ +F M RA V+P+ IT++ +LSAC H G
Sbjct: 382 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 441
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G+RY++ +K+ + I P++ Y CM+DLL RAG EA++ +RRMP E +A WGSL
Sbjct: 442 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSL 501
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ + EL E A + L+ ++P+NSG Y+ ++N+Y+ GRW+++ +I K ++ V+
Sbjct: 502 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 561
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQN 359
K G S+ + ++H F A D HP D +Y + ++ ++K F LQ+
Sbjct: 562 KETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQS 613
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 37/310 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN MV+ +G ++ A +LFE M +++++SW +IAGY Q +A+ LF RM E+
Sbjct: 127 WNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS 186
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 124
+ PDE + + LSACA LG V +G+ +H YI + + + NALI YAKSG
Sbjct: 187 MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENAR 246
Query: 125 ------------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLG 157
KIG A ++F M N+ V+ WT MI G +G
Sbjct: 247 RIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRN 306
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA+D+F M +PN T A+LS C + ++ G++ + R +E
Sbjct: 307 DEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSLLEQSSSVSNA 365
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 275
+I + R+G A ++ ++ + W S++ A +G E + +++ +EP
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425
Query: 276 HNSGNYAILS 285
+LS
Sbjct: 426 DRITYVGVLS 435
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 36/277 (12%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
+AK G L +AR +F M E++ +SWT ++ G + + EAI M + P + +
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV------ 132
LS+CA A +G +H+++ + GL + VP+ N++++MY K G A V
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 133 -------------------------FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
FE+M ++S+++W MIAG +GL +AL +FSRM
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 168 -ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 225
+ + P+E T ++LSAC ++G V +G++ + I+++ ++ +I ++
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTYAKS 239
Query: 226 GYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 261
G ++ A +++ + M + N + +LL GD+E
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
M+AKSG++ A VF M + ++WT M+ GL G EA+ M P + T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 179 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+LS+C +GR+ + + + G+ + ++++ G+ G + A + RM
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFV-VKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 239 PFEANAAIWGSLLAASNIYGDVELGECALQHL 270
P + ++ W ++++ + G ++L E + +
Sbjct: 120 PVRSVSS-WNAMVSLNTHLGRMDLAESLFESM 150
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++++ YA+ G + +AR F+++ EKN++S+ ++ GYA+ + EA LF + +
Sbjct: 393 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 452
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
+ LS A +GA+ GE IH + + G + + NALI MY++ G I A QV
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 512
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M++++VI+WT+MI G A HG AL+MF +M KPNEIT++A+LSAC HVG++
Sbjct: 513 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 572
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+++FN M +GI P++E Y CM+DLLGR+G L EA + + MP A+A +W +LL
Sbjct: 573 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 632
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G+ ELG A + +++ EP + Y +LSN++A G+W + KIRK M++ + K
Sbjct: 633 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 692
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
GCS+IEV RVH F G+TSHP ++YQ L ++ ++K
Sbjct: 693 AGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 732
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 141/259 (54%), Gaps = 13/259 (5%)
Query: 13 NTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
NT+++ Y+K GD AR +FE M +++++SW+ +++ +A +AI F M
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAK-SGKIGKA 129
P+E A + AC+ +GE I+ ++ + G L V + LIDM+ K SG +G A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF+ M ++++TWT MI A G R+A+D+F ME + P+ T+ ++LSAC +
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA---GYLQEAEKLLRRMPFEANAAI 246
GL+ LG++ + + R G+ + ++D+ + G + ++ K+ +MP E N
Sbjct: 263 GLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 320
Query: 247 WGSLLAASNIYGDVELGEC 265
W +++ A V+ GEC
Sbjct: 321 WTAIITAY-----VQSGEC 334
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 129/237 (54%), Gaps = 14/237 (5%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 82
GDL +A +F+ M E+N+++WT +I +AQ+ +AI LF M++ PD + L
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---SGKIGKALQVFENMKNK 139
SAC +LG + LG+ +H+ + + GL V + +L+DMYAK G + + +VFE M
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316
Query: 140 SVITWTTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+V++WT +I G +EA+++F +M ++PN +F ++L AC ++ G +
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 199 FNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ Y ++ I C +I + R+G +++A K + FE N + +++
Sbjct: 377 YS-----YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIV 427
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 130/248 (52%), Gaps = 9/248 (3%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKP 73
M A A G ++++R +FE M E NV+SWT +I Y Q + + EAI LF +M +++P
Sbjct: 293 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRP 352
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ + + L AC L GE +++Y + G+ ++ + N+LI MYA+SG++ A + F
Sbjct: 353 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 412
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ + K+++++ ++ G A + EA +F+ + + + TF ++LS +G +
Sbjct: 413 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 472
Query: 194 LGRR-YFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
G + + ++K Y K Q C +I + R G ++ A ++ M + N W S+
Sbjct: 473 KGEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSM 527
Query: 251 LAASNIYG 258
+ +G
Sbjct: 528 ITGFAKHG 535
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 57 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 116
+ A + M +N PD L +C + +LG+ +H + Q GL + N L
Sbjct: 26 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 85
Query: 117 IDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
I +Y+K G A +FE M NK +++W+ M++ A + + +A+ F M PN
Sbjct: 86 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 145
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC-MIDLLGR-AGYLQEAEK 233
E F A++ AC + +G + + +E + GC +ID+ + +G L A K
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYK 204
Query: 234 LLRRMPFEANAAIW 247
+ +MP E N W
Sbjct: 205 VFDKMP-ERNLVTW 217
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 224/349 (64%), Gaps = 5/349 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
WNTM+ G+ + G L A F M+ KNV++WT +I+G+ Q + EA+ +F MQ N
Sbjct: 287 WNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANN 346
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
VKP+E ++ L AC++L A+ G+ IH I + + + +ALI+MY+K G++ A
Sbjct: 347 VKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELAR 406
Query: 131 QVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
++F++ + ++ V++W MIA A HG G +A+ +F M+ +P+ +T+IA+LSAC H
Sbjct: 407 KIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSH 466
Query: 189 VGLVELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
GLV+ G + F N+++ R I+ + + + C++DL GRAG LQEA ++ + + +A++W
Sbjct: 467 AGLVDEGLKLFENLVRDR-SIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+LLA N++G ++LG+ + L++ EP N+G Y +LSNIYA G+W E+ +R M+D
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 356
G+KK PGCS+IEV VH FV GD SH +F+ +Y +L ++ +MK H
Sbjct: 586 GLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGH 634
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ GYA+ G ++ A LFE M E+NV+SW T+I + Q + +EA LF RM +V
Sbjct: 163 WNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV 222
Query: 72 KPDEIAMLAALSACAQL-------------GAVELGEWIHNYIEQYGLNTIVPLN----- 113
M+A LS ++ V I Y + L+ L
Sbjct: 223 -ISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPE 281
Query: 114 ------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 167
N +I + ++GK+ +A+ F M NK+V+TWT +I+G G EAL +FS M
Sbjct: 282 RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 168 ERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 226
+ A VKPNE TF+++L AC + + G++ I+ S+ + + +I++ + G
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII-SKTVYQEVADVVSALINMYSKCG 400
Query: 227 YLQEAEKLLRRMPF-EANAAIWGSLLAASNIYG 258
L+ A K+ + W ++AA +G
Sbjct: 401 ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHG 433
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 32/299 (10%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENV 71
N ++ K G + AR +FE M +++V+SWT +I GY + EA TLF R ++NV
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKI 126
+ A +S + +E E L +P+ N +I+ YA+ G I
Sbjct: 130 ----VTWTALVSGYVRWNRIE---------EARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
+AL +FE M ++V++W T+I EA ++F+RM V I++ +++
Sbjct: 177 DQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV----ISWTTMVAGL 232
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
G ++ R F+ M R + + MI + L EA KL +MP E +
Sbjct: 233 SKNGRIDDARLLFDKMPVR-----NVVSWNTMIIGYAQNMRLDEAFKLFEQMP-ERELSS 286
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
W +++ G +E A+ K+ N + + + + GR E+ KI M+
Sbjct: 287 WNTMITGFIQNGKLER---AVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQ 342
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 86 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 145
+Q ++ I + + + N+ V +N LI K GKIG+A QVFE M ++ V++WT
Sbjct: 42 SQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWT 101
Query: 146 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
+I G G+ EA +F R + + N +T+ A++S +E RR F+ M +
Sbjct: 102 AVITGYIKCGMIEEAKTLFDRNDAIK---NVVTWTALVSGYVRWNRIEEARRLFDAMPVK 158
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
I + MI+ R G++ +A L +MP E N W +++ A
Sbjct: 159 NVI-----SWNTMIEGYARKGWIDQALDLFEKMP-ERNVVSWNTVITA 200
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 214/345 (62%), Gaps = 4/345 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ--MDQPNEAITLFRRMQVE 69
WNTMV G+ ++GD+ A+A+F+ M +++++SW +L+ GY++ DQ + VE
Sbjct: 303 WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE 362
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
VKPD + M++ +S A G + G W+H + + L L++ALIDMY K G I +A
Sbjct: 363 KVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERA 422
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF+ K V WT+MI GLA HG G++AL +F RM+ V PN +T +A+L+AC H
Sbjct: 423 FMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL-RRMPFEANAAIWG 248
GLVE G FN MK ++G +P+ E YG ++DLL RAG ++EA+ ++ ++MP + ++WG
Sbjct: 483 GLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWG 542
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
S+L+A D+E E AL L+KLEP G Y +LSNIYA +GRW S K R+ M + G
Sbjct: 543 SILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRG 602
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDT-SHPDFDRLYQILCKINGQMK 352
VKK G S + + +H FVA + +HP + + +IL + +MK
Sbjct: 603 VKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 45/315 (14%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
WN++V Y ++G+ A +F M +V S+ +I GYA+ EA+ L+ +M +
Sbjct: 168 LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGK 128
++PDE +L+ L C L + LG+ +H +IE+ G ++ + L+NAL+DMY K + G
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER------------------- 169
A + F+ MK K + +W TM+ G G A +F +M +
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 170 --------------ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 215
+VKP+ +T ++++S + G + G R+ + + R ++
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLS 406
Query: 216 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE- 274
+ID+ + G ++ A + + E + A+W S++ +G+ G+ ALQ +++
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTAT-EKDVALWTSMITGLAFHGN---GQQALQLFGRMQE 462
Query: 275 ----PHNSGNYAILS 285
P+N A+L+
Sbjct: 463 EGVTPNNVTLLAVLT 477
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 23/278 (8%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAI 60
F +SRL++ + +L+ A+ LF NV + T+I+ + NE
Sbjct: 67 FPMSRLIF------FSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVS--SSKNECF 118
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDM 119
L+ M V PD L + A + L V+ IH +I G L+ L N+L+
Sbjct: 119 GLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKF 175
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 179
Y + G G A +VF M + V ++ MI G A G EAL ++ +M ++P+E T
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 180 IAILSACCHVGLVELGRRYFNIMKSRYGI-EPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+++L C H+ + LG+ ++ R + + ++D+ Y + E L +
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDM-----YFKCKESGLAKR 290
Query: 239 PFEA----NAAIWGSLLAASNIYGDVELGECALQHLIK 272
F+A + W +++ GD+E + + K
Sbjct: 291 AFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 33/206 (16%)
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC----------C 187
N +V + TMI+ A+ E ++S M R RV P+ TF+ ++ A C
Sbjct: 97 NPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHC 154
Query: 188 HV---GLVELGRRYFNIMKSRY------GI---------EPKIEQYGCMIDLLGRAGYLQ 229
H+ G + LG +N + Y G+ P + + MI + G+
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 230 EAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 286
EA KL +M E + SLL D+ LG+ + + P S N + +
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNA 274
Query: 287 IYAILGRWNESGKIRKVMRDMGVKKM 312
+ + + ESG ++ M K M
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDM 300
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 215/341 (63%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K+G ++ AR LF+ M +++++++ +LI GY + EA+ LF +M+ ++
Sbjct: 307 WNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDL 366
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+ D M++ L+ACA LGA+ G +H IEQ + + L AL+DMY K G++ +A
Sbjct: 367 RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASL 426
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M + V TW+ MIAGLA +G+G+ AL+ F M+ +PN +T+IAIL+AC H L
Sbjct: 427 VFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCL 486
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ GR YF M+ + I P IE YGCMIDLLGR+G L EA L+R MP + NA IW S+L
Sbjct: 487 LDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++ D L A +HL+KLEP Y L NIY +W ++ +IR++M + GVKK
Sbjct: 547 SACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKK 606
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G S I V+ +VH+F+ D +HP + ++ +I ++K
Sbjct: 607 AAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLK 647
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 42/311 (13%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W T+++G AK+G L++A L +NVISWT LI+GY++ + EA+ F M + +
Sbjct: 174 WTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGI 233
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+ ++ LSACAQL + G +H + + G+ L ALIDMYAK G IG+A +
Sbjct: 234 EPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWE 293
Query: 132 V--------------------------------FENMKNKSVITWTTMIAGLALHGLGRE 159
V F+ M+++ ++T+ ++I G G RE
Sbjct: 294 VFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLRE 353
Query: 160 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 219
AL +F +M R ++ + T +++L+AC +G + GR ++ R +E I ++
Sbjct: 354 ALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRL-VEVDIYLGTALL 412
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-----KLE 274
D+ + G ++EA + + M + W +++A G +G+ AL++ +
Sbjct: 413 DMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNG---MGKAALEYFFWMKVDGFQ 468
Query: 275 PHNSGNYAILS 285
P++ AIL+
Sbjct: 469 PNSVTYIAILT 479
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 13 NTMVAGYAKVGDLN--NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 70
N++V + L+ A LF+ M + T L A + P + L+RRM+
Sbjct: 39 NSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTG 98
Query: 71 VKPDEIAMLAALSACAQLGA-VELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKSGKIGK 128
V D CA+ A V L + +H + L + VPL +N +I MY + G G
Sbjct: 99 VCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGD 158
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGL-----------------------------GR- 158
A + F+++ K + WTT+I+GLA GL GR
Sbjct: 159 ARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRA 218
Query: 159 -EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA+D F+ M ++P+E+T I +LSAC + + GR ++ + G+ +
Sbjct: 219 AEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEK-GMLMSGKLVVA 277
Query: 218 MIDLLGRAGYLQEAEKLLR-----RMPFEANAAIWG 248
+ID+ + G + A ++ R P NA I G
Sbjct: 278 LIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDG 313
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 210/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K L++A +FE + ++I+ T++I +Q D AI LF M + ++
Sbjct: 443 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + L+ACA L A E G+ +H ++ + + NAL+ YAK G I A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F ++ + V++W+ MI GLA HG G+ AL++F RM + PN IT ++L AC H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ +RYFN MK +GI+ E Y CMIDLLGRAG L +A +L+ MPF+ANA++WG+LL
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 682
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
AS ++ D ELG+ A + L LEP SG + +L+N YA G WNE K+RK+M+D +KK
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKE 742
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
P S++EV +VH F+ GD SHP +Y L ++ M A ++ N
Sbjct: 743 PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPN 789
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
N +VA Y G +++AR +F E +E+N +SW L++ Y + DQ +AI +F M +
Sbjct: 139 NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P E ++AC ++ G +H + + G V NAL+DMY K G++ A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+FE M + V++W +I+G L+G A+++ +M+ + + PN +IL AC G
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+LGR+ M G ++D+ + +L +A K+ M + +W +L+
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALI 376
Query: 252 AASNIYG 258
+ + G
Sbjct: 377 SGCSHGG 383
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +V Y K+G ++ A +FE M + +V+SW LI+G + AI L +M+ +
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ + + L ACA GA +LG IH ++ + ++ + L+DMYAK+ + A++V
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 360
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
F+ M ++ +I W +I+G + G EA +F + + + N T A+L +
Sbjct: 361 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 5 SRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
S L N +++ Y+K AR +F+ + + +SW++L+ Y+ P AI F
Sbjct: 33 SGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFH 92
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M+ E V +E A+ L +LG +H G + V + NAL+ MY G
Sbjct: 93 GMRAEGVCCNEFALPVVLKCVPD---AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFG 149
Query: 125 KIGKALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 183
+ A +VF E ++ ++W +++ + +A+ +F M + ++P E F ++
Sbjct: 150 FMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
+AC ++ GR+ + M R G E + ++D+ + G + A + +MP +++
Sbjct: 210 NACTGSRNIDAGRQ-VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSD 267
Query: 244 AAIWGSLLAASNIYG 258
W +L++ + G
Sbjct: 268 VVSWNALISGCVLNG 282
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V YAK L++A +F+ M+ +++I W LI+G + + +EA ++F ++ E + +
Sbjct: 344 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 403
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ A L + A L A +H E+ G + N LID Y K + A++VFE
Sbjct: 404 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 463
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
+ +I T+MI L+ G A+ +F M R ++P+ ++L+AC + E
Sbjct: 464 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G++ + R + ++ + G +++AE +P E W +++
Sbjct: 524 GKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGL 581
Query: 255 NIYG 258
+G
Sbjct: 582 AQHG 585
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 94 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 153
G +H + + G + L N LI Y+K + A +VF+ + + ++W++++ +
Sbjct: 23 GAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 154 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 213
+GL R A+ F M V NE +L V +LG + + M G +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQ-VHAMAMATGFGSDVF 136
Query: 214 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
++ + G G++ +A ++ E NA W L++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 205/345 (59%), Gaps = 6/345 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y K + +A +FE+M EK++ SW ++ + + Q + + L RM ++
Sbjct: 196 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQ 255
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVPLNNALIDMYAKSGKI 126
PD + + L AC+ L A+ G IH Y+ GL V L NA+IDMYAK G +
Sbjct: 256 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 315
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC
Sbjct: 316 RDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 375
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L MP EAN +
Sbjct: 376 SHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 435
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+ E ++R MR
Sbjct: 436 WRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQ 495
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
V+K PGCS+IE+ VH FV+ D +HP+ +Y L + ++
Sbjct: 496 QNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLTARL 540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 14/265 (5%)
Query: 7 LLYKFW--------NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 58
LL+KF + +V Y K G + +A+ FE + ++V+ W ++ GYAQ+ Q
Sbjct: 81 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 140
Query: 59 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 118
+ FRRM E+V P + LS A +G + G IH + + G ++ V ++N+LID
Sbjct: 141 VLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 200
Query: 119 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 178
MY K I AL++FE M+ K + +W ++ + G L + RM A ++P+ +T
Sbjct: 201 MYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 260
Query: 179 FIAILSACCHVGLVELGRRYFNIM-KSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEK 233
+L AC H+ + GR M S G + K + +ID+ + G +++A
Sbjct: 261 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 320
Query: 234 LLRRMPFEANAAIWGSLLAASNIYG 258
+ RM + A W ++ ++G
Sbjct: 321 VFERM-XNKDVASWNIMIMGYGMHG 344
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 19 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 77
Y+K +N A ++F T E NV ++ +I+G+ P E +++M+ E V PD+
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 78 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 137
A+ AC L +E+ + IH + ++GL V + +AL++ Y K G + A FE +
Sbjct: 62 FPCAIKAC--LDVLEIKK-IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 118
Query: 138 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
+ V+ W M+ G A G L+ F RM V P+ T ILS +G + G R
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG-R 177
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 257
+ + G + + +ID+ G+ +++A ++ M E + W S+ +
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIXSVHEQC 236
Query: 258 GD 259
GD
Sbjct: 237 GD 238
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 202/304 (66%), Gaps = 1/304 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 70
WN M++GYA +N AR LF+ M +++ SW+ +++GY+Q+ NEA+ LF M +
Sbjct: 210 WNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDK 269
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ P+E A+++A+SACAQL A+E G W+H+YI++ L V L L+DMY K G I A
Sbjct: 270 MIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAA 329
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF M ++V +W +MIAGLAL+G G+EAL +F +M+ PN ITFIA+L+ C H G
Sbjct: 330 GVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSG 389
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
L+ GR F++M YGI+P+++ YGCM+DLLGRAG ++EA + +MP + ++ +WG+L
Sbjct: 390 LITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGAL 449
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
+ A I+G VELGE + LI LEPH+ G YA+L NI+A RW++ +R + + V
Sbjct: 450 VGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVL 509
Query: 311 KMPG 314
K PG
Sbjct: 510 KNPG 513
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 125/321 (38%), Gaps = 74/321 (23%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT++RLL A DL +A+ +F + + T+I ++ +++T
Sbjct: 44 FTVTRLL-----ACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMASSRT---LDSVT 95
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
+ M PD + + + LG +H ++ ++GL+ V + N +I +Y+
Sbjct: 96 FYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYS 155
Query: 122 K--------------------------------SGKIGKALQVFENMKNKSVITWTTMIA 149
SG+I +A ++F+ M K+ ++W MI+
Sbjct: 156 SFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMIS 215
Query: 150 GLALH-------------------------------GLGREALDMFSRMERA-RVKPNEI 177
G A G+ EALD+F M ++ PNE
Sbjct: 216 GYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEA 275
Query: 178 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
++ +SAC + +E GR + +K + + + ++D+ G+ G + +A +
Sbjct: 276 ALVSAVSACAQLRALEEGRWLHSYIKEKK-LRINVTLGTVLLDMYGKCGSILDAAGVFNL 334
Query: 238 MPFEANAAIWGSLLAASNIYG 258
M E N W S++A + G
Sbjct: 335 MS-ERNVNSWNSMIAGLALNG 354
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 210/342 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+T+V Y K G ++ A+ L + + + V+SW +++G++ + A F M +K
Sbjct: 427 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLK 486
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA L +ELG+ IH I + + +++ L+DMYAK G + +L V
Sbjct: 487 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 546
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL
Sbjct: 547 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 606
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 607 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 666
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK
Sbjct: 667 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 726
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
PGCS+IE +H F+ GD +HP LY++L + G+MK +
Sbjct: 727 PGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 768
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNTM+ Y+ GD++ A ALF+ M + +V+SW L++GY Q E++ LF M V
Sbjct: 86 WNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD L +C+ L + LG +H + GL V +AL+DMY K + AL
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
F M ++ ++W + IAG + L++F M+R + ++ ++ + +C +
Sbjct: 206 FFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE----ANAAI 246
+ GR+ + + +K+++ + + ++D+ +A L +A + +P +NA +
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM 323
Query: 247 WGSLLAASNIYGDV 260
G + S+I DV
Sbjct: 324 VGLFMIRSSIRFDV 337
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDM-- 119
+ Q V P + +CAQ G E + ++ VP ++N L+ M
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGR-EALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 63
Query: 120 -----------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAG 150
Y+ +G I A+ +F+ M + V++W +++G
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123
Query: 151 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 210
G+ +E++D+F M R V P+ TF +L +C + + LG + + + + G+E
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ-VHALAVKTGLEI 182
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ ++D+ G+ L +A MP E N WGS +A
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGSAIA 223
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 33/187 (17%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+V YAK L +AR F + V + ++ G LF M +++
Sbjct: 289 TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG------------LF--MIRSSIR 334
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ SACA+ G+ +H + +++D+Y K + +A +
Sbjct: 335 FDVVSLSGVFSACAETKGYFPGQQVHCLAIK-----------SVLDLYGKCKALMEAYLI 383
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA--ILSACCHVG 190
F+ MK K ++W +IA L +G + + F+ M R F+A ++ C G
Sbjct: 384 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFD------AFVASTVVDMYCKCG 437
Query: 191 LVELGRR 197
+++ ++
Sbjct: 438 IIDEAQK 444
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 213/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+K G+L + +F M +++I+W+T+IA Y+Q+ EA RM+ E K
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A+ + LS C + +E G+ +H ++ GL + +ALI MYAK G I +A ++
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +I+WT MI+G A HG +EA+++F +++ ++P+ +TFI +L+AC H G+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG YFN M Y I P E YGCMIDLL RAG L +AE L+R MP + + +W +LL
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+GDV+ G+ A ++KL+P+ +G + L+NI+A G+W E+ IR +M+ GV K
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S ++V V FV+GD SHP + +Y IL ++ M+
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 1/223 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++ Y K G L+ F M +V+SWTT++ Y QM + + + F+RM+ NV
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A +S CA ++ GE +H ++ G + + N+++ +Y+K G++ +V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +MK + +ITW+T+IA + G G EA + SRM KPNE ++LS C + ++
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E G++ + S G+E +I + + G + EA K+
Sbjct: 436 EQGKQLHAHVLS-VGLEQTSMVCSALIIMYAKCGSIAEASKIF 477
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 6/275 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K+G++ + +F+ M +N ++WT +I G + + F M V+ D A
Sbjct: 161 YMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAY 220
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL A A GA+ G IH + G + + N+L MY K GK+ L F M+
Sbjct: 221 AIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT 280
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V++WTT++ G L F RM + V PNE TF A++S C + ++ G +
Sbjct: 281 LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQ- 339
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + ++ L + G L K+ M F + W +++AA Y
Sbjct: 340 LHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA---YS 395
Query: 259 DVELGECALQHLIKLEPHN-SGNYAILSNIYAILG 292
V GE A ++L ++ N L+++ ++ G
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCG 430
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 8/259 (3%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAML 79
K L +AR LF+ + +++ +SWT +I+GY +EA+ LF +M++++ ++ D +
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 80 AALSACAQLGAVEL-GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C LG L G +H + + GL V + +AL+DMY K G+IG++ +VF+ M
Sbjct: 121 LGLKTCG-LGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++ +TWT +I GL G L FS M R++V+ + + L A G + GR
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS- 238
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G + + + + G L R+M + W +++ A Y
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR-TLDVVSWTTIVTA---YI 294
Query: 259 DVELGECALQHLIKLEPHN 277
+ +C LQ ++ N
Sbjct: 295 QMGKEDCGLQAFKRMRASN 313
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 219/349 (62%), Gaps = 1/349 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ GY K G + A +F+ M KN+++W ++IAGY + + + + +F+ M V+P+
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ + L C+ L A+ LG +H + + L+ +LI MY K G + A ++F
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFL 354
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K VITW MI+G A HG GR+AL +F +M +KP+ ITF+A++ AC H G V+L
Sbjct: 355 EMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDL 414
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +YF MK +GIE K Y C+IDLLGRAG L EA L++ MPF +AAI+G+LL A
Sbjct: 415 GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGAC 474
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+ +++L E A ++L+ L+P ++ Y L+NIYA +W++ K+RK+M++ V K+PG
Sbjct: 475 RIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPG 534
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN-EFS 362
S+IE+ HEF + D HP+ +++ L +++G+MK A ++ + EF+
Sbjct: 535 YSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFA 583
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M+ Y + + A A F M K++ SW TLI+G+AQ Q +A LF M +N
Sbjct: 139 YNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN- 197
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A +S + G +E E ++ + G+ ++V + A++ Y K GK+ A +
Sbjct: 198 ---GVSWSAMISGYVEHGDLEAAEELYKNV---GMKSVV-VETAMLTGYMKFGKVELAER 250
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K+++TW +MIAG + + L +F M +RV+PN ++ ++L C ++
Sbjct: 251 IFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSA 310
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LGR+ ++ S+ + +I + + G L A KL MP + W +++
Sbjct: 311 LPLGRQMHQLV-SKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNAMI 368
Query: 252 AASNIYG 258
+ +G
Sbjct: 369 SGYAQHG 375
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y K GDL++A LF M K+VI+W +I+GYAQ +A+ LF +M+ +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I +A + AC G V+LG ++ + +++G+ +ID+ ++G++ +A+
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 132 VFENM 136
+ + M
Sbjct: 454 LIKEM 458
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERARV 172
N I + ++ + A VFE M ++ +TW TM++G + G +EA ++F ++
Sbjct: 77 NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP---- 132
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ +++ +L V+ +FN M + I + +I + G +Q+A
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK-----DIASWNTLISGFAQNGQMQKAF 187
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
L MP E N W ++++ +GD+E E
Sbjct: 188 DLFSVMP-EKNGVSWSAMISGYVEHGDLEAAE 218
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 213/340 (62%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+++ Y+K G+L + +F M +++I+W+T+IA Y+Q+ EA RM+ E K
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A+ + LS C + +E G+ +H ++ GL + +ALI MYAK G I +A ++
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + +I+WT MI+G A HG +EA+++F +++ ++P+ +TFI +L+AC H G+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+LG YFN M Y I P E YGCMIDLL RAG L +AE L+R MP + + +W +LL
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A I+GDV+ G+ A ++KL+P+ +G + L+NI+A G+W E+ IR +M+ GV K
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PG S ++V V FV+GD SHP + +Y IL ++ M+
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 1/223 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++ Y K G L+ F M +V+SWTT++ Y QM + + + F+RM+ NV
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+E A +S CA ++ GE +H ++ G + + N+++ +Y+K G++ +V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F +MK + +ITW+T+IA + G G EA + SRM KPNE ++LS C + ++
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
E G++ + S G+E +I + + G + EA K+
Sbjct: 436 EQGKQLHAHVLS-VGLEQTSMVCSALIIMYAKCGSIAEASKIF 477
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 6/275 (2%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K+G++ + +F+ M +N ++WT +I G + + F M V+ D A
Sbjct: 161 YMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAY 220
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL A A GA+ G IH + G + + N+L MY K GK+ L F M+
Sbjct: 221 AIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT 280
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
V++WTT++ G L F RM + V PNE TF A++S C + ++ G +
Sbjct: 281 LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQ- 339
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ G + ++ L + G L K+ M F + W +++AA Y
Sbjct: 340 LHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA---YS 395
Query: 259 DVELGECALQHLIKLEPHN-SGNYAILSNIYAILG 292
V GE A ++L ++ N L+++ ++ G
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCG 430
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 8/259 (3%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAML 79
K L +AR LF+ + +++ +SWT +I+GY +EA+ LF +M++++ ++ D +
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 80 AALSACAQLGAVEL-GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L C LG L G +H + + GL V + +AL+DMY K G+IG++ +VF+ M
Sbjct: 121 LGLKTCG-LGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
++ +TWT +I GL G L FS M R++V+ + + L A G + GR
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS- 238
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G + + + + G L R+M + W +++ A Y
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR-TLDVVSWTTIVTA---YI 294
Query: 259 DVELGECALQHLIKLEPHN 277
+ +C LQ ++ N
Sbjct: 295 QMGKEDCGLQAFKRMRASN 313
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 200/309 (64%), Gaps = 2/309 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ G+ K GD++ LF M +++V+SW +I+ AQ + +EA+ LF M
Sbjct: 176 WNLMIHGFCKRGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGF 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKAL 130
KPDE ++ L CA+LG+V++G+WIH+Y + GL V + NAL+D Y KSG A
Sbjct: 236 KPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETAR 295
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ M K+VI+W T+I+GLAL+G G +++ M V+PN+ TF+ +LS C H G
Sbjct: 296 RVFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAG 355
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGS 249
L E GR M + IEPK+E YGCM+DLLGR+G ++EA L+R MP A NAA+WGS
Sbjct: 356 LFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGS 415
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A +GDVEL A++ LI LEP NSGNY +LSN+YA RW++ +R +MR+ V
Sbjct: 416 LLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNV 475
Query: 310 KKMPGCSYI 318
KK PG S I
Sbjct: 476 KKTPGQSVI 484
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 38/310 (12%)
Query: 13 NTMVAGYAKV-GDLNN---ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
N +++ + + G LN A +F+ +I + +I GY+ E+ LF M+
Sbjct: 41 NQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGPFEESFRLFSSMKN 100
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA------- 121
+ PDE + L AC+ LG ++LG+ +H + G + +I++Y+
Sbjct: 101 RGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMED 160
Query: 122 ------------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
K G + L +F M+ +SV++W MI+ LA
Sbjct: 161 AEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRD 220
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EAL +F M KP+E T + +L C +G V++G+ + KS +
Sbjct: 221 SEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNA 280
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 275
++D ++G + A ++ MP N W +L++ + G+ ELG L+ ++ + P
Sbjct: 281 LVDFYNKSGMFETARRVFDEMP-RKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRP 339
Query: 276 HNSGNYAILS 285
+++ +LS
Sbjct: 340 NDATFVGVLS 349
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 97 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 156
IH + ++GLN + + + + + K+ A ++F+ +N ++I + MI G +L+G
Sbjct: 28 IHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGP 87
Query: 157 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 216
E+ +FS M+ + P+E T +L AC +G+++LG+ + G E
Sbjct: 88 FEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLV-VGFEGFSAIRI 146
Query: 217 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 276
+I+L G +++AEK+ M ++ + +W ++ GDV++G C + + K
Sbjct: 147 GVIELYSSCGVMEDAEKVFDEM-YQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRK---R 202
Query: 277 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IEVSKRVH 325
+ ++ I+ + A R +E+ + M D G K +P C+ ++V K +H
Sbjct: 203 SVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIH 262
Query: 326 EFVAGDTSHPDF 337
+ + DF
Sbjct: 263 SYAKSSGLYRDF 274
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 206/302 (68%), Gaps = 2/302 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ YAK GD+ AR LF+ + E++V+SW +I+GY + A+ LF +MQ
Sbjct: 182 WNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE 241
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKA 129
KPD + ML+ LSACA G +++G+ +H+ + + + N V L NALIDMYAK G + A
Sbjct: 242 KPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VF +M++K V TW +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G+V+ GR +FN+M+ +Y +EP I+ YGC++D+LGRAG L+EA + + M E N+ IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A ++G++EL + A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 310 KK 311
K
Sbjct: 482 NK 483
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 23 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM----QVENVKPDEIAM 78
G + +A +F+ + + + TLI G A P +A++L+ RM V+PD++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
L AC +GA + G +H ++ + G + + NALI M+A G +G A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ + W+ MI G A G A D+F + VK + +++ +++A G + L R
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLF---DECPVK-DLVSWNVMITAYAKRGDMALAREL 201
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANAAIWGSLLAASN 255
F+ + R + + MI R G A +L ++RM + + SLL+A
Sbjct: 202 FDQVPER-----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 256
Query: 256 IYGDVELGECALQHLIKLEPHNSGNYAILSN----IYAILGRWNESGKIRKVMRDMGV 309
GD+++G+ L + N G +L N +YA G + ++ MRD V
Sbjct: 257 DSGDLDVGQRLHSSLSDMFSRN-GFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDV 313
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 MFTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 60
MF+ + N ++ YAK G + +A +F M +K+V +W +++ G A E+I
Sbjct: 274 MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESI 333
Query: 61 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDM 119
+F +M V+PDEI +A L AC+ G V+ G N ++ +Y + + ++DM
Sbjct: 334 DMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDM 393
Query: 120 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 155
++G + +A + + MK + + W T+++ +HG
Sbjct: 394 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----ERARVKPNE 176
A G I A VF+ + + T+I G A R+A+ +++RM V+P++
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 177 ITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+TF +L AC +G + G + + +++K+ G E +I + G L A L
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKA--GCESDAFVKNALIGMHASCGNLGIAAALF 140
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVE-----LGECALQHLI 271
E +A W +++ GD+ EC ++ L+
Sbjct: 141 DGRARE-DAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 207/313 (66%), Gaps = 2/313 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAKVG+L A+ LF M ++VISWT++I GY+ Q EA+ LF+ M V V
Sbjct: 283 WNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMV 342
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDEI + ALSACA LG+++ GE +H+YI ++ + + V + N+LIDMY K G + KALQ
Sbjct: 343 KPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQ 402
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +MK + ++WT++I+GLA++G AL++F +M + + P TF+ +L AC HVGL
Sbjct: 403 VFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGL 462
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +F M++ Y + P+++ YGC++DLL R+GYL A +++MP + IW LL
Sbjct: 463 VDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILL 522
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++G++ L E + L+ L+P N+GNY + S+ YA RW++ KIRK+M ++K
Sbjct: 523 SACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQK 582
Query: 312 MPGCSYIEVSKRV 324
C+Y + R+
Sbjct: 583 --PCAYSSIEVRI 593
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 148/291 (50%), Gaps = 33/291 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y G+L A+ +F+ M E++V+SW ++I GY Q ++ + + LFR MQ NV+
Sbjct: 152 NALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVR 211
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + M+ A+SA L E+G+++ YI+++G+ + L N LIDMY + G I A +V
Sbjct: 212 ADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRV 271
Query: 133 FENMKNKS-------------------------------VITWTTMIAGLALHGLGREAL 161
F MK K+ VI+WT+MI G +L EA+
Sbjct: 272 FYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAV 331
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M + VKP+EIT LSAC H+G ++ G + ++ ++ I+ + +ID+
Sbjct: 332 KLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIR-KHDIKSDVFVGNSLIDM 390
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
+ G +++A ++ M ++ W S+++ + G E ++K
Sbjct: 391 YCKCGVVEKALQVFNDMK-TRDSVSWTSIISGLAVNGFAESALNVFDQMLK 440
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A +F + ++ W +I G ++ D+PN+AI + M + ++ + + +
Sbjct: 63 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 122
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA++ V G+ + + + G + + ++NALI MY G++ A +VF+ M + V++W
Sbjct: 123 CARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSW 182
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++I G ++ LD+F M+ V+ + +T + +SA C + E+G Y
Sbjct: 183 NSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG-DYLVKYID 241
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+G+ + +ID+ GR G + A ++ +M E N W +++
Sbjct: 242 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMK-EKNIVSWNAMI 287
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 218/352 (61%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+ +AR +F +M ++V++WT +I GY Q + +EAI LFR M
Sbjct: 368 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 427
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS CA L ++ G+ IH + L ++NA+I MYA+SG A +
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 487
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K ITWT+MI LA HG G EA+ +F M RA V+P+ IT++ +LSAC H G
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G+RY++ +K+ + I P++ Y CM+DLL RAG EA++ +RRMP E +A WGSL
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSL 607
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ + EL E A + L+ ++P+NSG Y+ ++N+Y+ GRW+++ +I K ++ V+
Sbjct: 608 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 667
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQN 359
K G S+ + ++H F A D HP D +Y + ++ ++K F LQ+
Sbjct: 668 KETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQS 719
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 37/310 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN MV+ +G ++ A +LFE M +++++SW +IAGY Q +A+ LF RM E+
Sbjct: 233 WNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS 292
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 124
+ PDE + + LSACA LG V +G+ +H YI + + + NALI YAKSG
Sbjct: 293 MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENAR 352
Query: 125 ------------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLG 157
KIG A ++F M N+ V+ WT MI G +G
Sbjct: 353 RIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRN 412
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA+D+F M +PN T A+LS C + ++ G++ + R +E
Sbjct: 413 DEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSLLEQSSSVSNA 471
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 275
+I + R+G A ++ ++ + W S++ A +G E + +++ +EP
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Query: 276 HNSGNYAILS 285
+LS
Sbjct: 532 DRITYVGVLS 541
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 36/284 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ +AK G L +AR +F M E++ +SWT ++ G + + EAI M +
Sbjct: 101 WNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
P + + LS+CA A +G +H+++ + GL + VP+ N++++MY K G A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATT 220
Query: 132 V-------------------------------FENMKNKSVITWTTMIAGLALHGLGREA 160
V FE+M ++S+++W MIAG +GL +A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 280
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
L +FSRM + + P+E T ++LSAC ++G V +G++ + I+++ ++ +
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--AL 338
Query: 219 IDLLGRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 261
I ++G ++ A +++ + M + N + +LL GD+E
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 215/347 (61%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT+V YAK G++ ++ +FE M +++I+W T+IA + N + + RM+ E V
Sbjct: 514 NTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 573
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD ML+ L C+ L A G+ IH I + GL + VP+ N LI+MY+K G + + QV
Sbjct: 574 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 633
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ MK K V+TWT +I+ ++G G++A+ F ME A + P+ + F+AI+ AC H GLV
Sbjct: 634 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 693
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G YF+ MK Y IEP+IE Y C++DLL R+ L +AE + MP + +++IWG+LL+
Sbjct: 694 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 753
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A + GD E+ + + +I+L P ++G Y ++SN+YA LG+W++ IRK ++ G+KK
Sbjct: 754 ACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKD 813
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++E+ +V+ F G F+ + ++L + G M ++ N
Sbjct: 814 PGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIAN 860
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 137/247 (55%), Gaps = 3/247 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ YAK G+L ++ +F M K+ +SW ++I Y Q +EA+ LF+ M+ + VK
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 472
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + LS QLG + LG+ +H + + G N+ + ++N L+DMYAK G++G +L+V
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 532
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FENMK + +ITW T+IA L M SRM V P+ T ++IL C +
Sbjct: 533 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
G+ + + G+E + +I++ + G L+ + ++ + M + + W +L++
Sbjct: 593 RQGKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALIS 650
Query: 253 ASNIYGD 259
A +YG+
Sbjct: 651 ACGMYGE 657
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 133/245 (54%), Gaps = 6/245 (2%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + DL+ AR +FE M ++V+SW +LI+GY NEA+ ++ R + V
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD M + L AC LG+VE G+ IH IE+ G+ V +NN L+ MY K + ++
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ M + ++W TMI G + GL E++ +F M + KP+ +T +IL AC H+G +
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDL 391
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E G+ + M + G E +I++ + G L ++++ M + ++ W S++
Sbjct: 392 EFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMI- 448
Query: 253 ASNIY 257
N+Y
Sbjct: 449 --NVY 451
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ Y K L + R +F+ M ++ +SW T+I GY+Q+ E+I LF M V K
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 372
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD + + + L AC LG +E G+++H+Y+ G +N LI+MYAK G + + +V
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F MK K ++W +MI +G EA+ +F +M + VKP+ +T++ +LS +G +
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 491
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG+ + ++ G I ++D+ + G + ++ K+ M + W +++A
Sbjct: 492 XLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIA 549
Query: 253 ASNIYGDVELG 263
+ D LG
Sbjct: 550 SCVHSEDCNLG 560
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 46/335 (13%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F ++A YA D ++ ++F L + NV W ++I +EA++L+ Q
Sbjct: 109 FSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRI 168
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD + ++ACA L E+ + IH+ + G + + + NALIDMY + + KA
Sbjct: 169 RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKA 228
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
+VFE M + V++W ++I+G +G EAL+++ R V P+ T ++L AC +
Sbjct: 229 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 288
Query: 190 GLVEL-----------------------------------GRRYFNIMKSRYGIEPKIEQ 214
G VE GRR F+ M R +
Sbjct: 289 GSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV-----S 343
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRM--PFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
+ MI + G +E+ KL M F+ + S+L A GD+E G+ ++I
Sbjct: 344 WNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 403
Query: 273 --LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
E + + IL N+YA G S ++ M+
Sbjct: 404 SGYECDTTAS-NILINMYAKCGNLLASQEVFSGMK 437
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 221/354 (62%), Gaps = 4/354 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--EN 70
N ++ Y G L+ A LF+ M ++++SW+TLI+ + + P EA+++F++MQ+ +
Sbjct: 116 NALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRD 175
Query: 71 VKP--DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 128
++ D ML+ +SA + LG +ELG W+H++I + G+ VPL ALI+MY++ G I +
Sbjct: 176 IRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDR 235
Query: 129 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 188
+++VF+ M ++V+TWT +I GLA+HG REAL +F M+ + +KP+ FI +L AC H
Sbjct: 236 SVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSH 295
Query: 189 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLVE G R F M+ +GI+P +E YGCM+DLLGRAG + EA + MP + N+ IW
Sbjct: 296 GGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWR 355
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL A + + L E A + +I+L+P++ G+Y +LSN Y +G W +R M+
Sbjct: 356 TLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMKQNR 415
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 362
+ K PG S++ + + VHEFV+GD HP ++ + + L I +K + N S
Sbjct: 416 IVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTSS 469
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 17/235 (7%)
Query: 28 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 87
A L L T + S+ T+I + P AI+LF M +V D L
Sbjct: 41 ATVLLRLPTPPDPFSYNTIIKHVS----PTGAISLFSHMHRNSVPFDHFTFPLILKHHHH 96
Query: 88 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 147
L I + G +T + + NALI+ Y G + A+++F+ M+ + +++W+T+
Sbjct: 97 HLLHSL-------IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTL 149
Query: 148 IAGLALHGLGREALDMFSRMERA----RVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
I+ L + L EAL +F +M+ R + ++++SA +G++ELG + +
Sbjct: 150 ISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELG-IWVHSFI 208
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
R GI + +I++ R G + + K+ MP E N W +L+ ++G
Sbjct: 209 VRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMP-ERNVVTWTALINGLAVHG 262
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/348 (41%), Positives = 216/348 (62%), Gaps = 1/348 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y + G L A+ +FE ++VISW ++IAG+AQ A LF+ MQ E ++
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + LS C A+ELG+ IH I + GL V L NALI+MY + G + A V
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE-ITFIAILSACCHVGL 191
F +++++ V++WT MI G A G +A+++F +M+ +P + TF +ILSAC H GL
Sbjct: 590 FHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGL 649
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V G + F+ M+S YG+ P IE YGC++ LLGRA QEAE L+ +MPF +AA+W +LL
Sbjct: 650 VLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 709
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+G++ L E A + +KL N Y +LSN+YA GRW++ KIR+VM G++K
Sbjct: 710 GACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRK 769
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PG S+IEV +HEF+A D SHP+ +Y L +++ +M+ A + +
Sbjct: 770 EPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPD 817
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 132/226 (58%), Gaps = 1/226 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +++ YA+ GDL AR LF M ++++ISW +IAGYA+ + EA+ L+++MQ E VK
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P + L LSACA A G+ IH I + G+ + L NAL++MY + G + +A V
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + + VI+W +MIAG A HG A +F M+ ++P+ ITF ++LS C + +
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
ELG++ + + G++ + +I++ R G LQ+A + +
Sbjct: 549 ELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+V + GD+++A+ F+ + +++V+ + LIA AQ EA + RM+ + V +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
L+ L+AC+ A+E G+ IH++I + G ++ V + NALI MYA+ G + KA ++F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M + +I+W +IAG A EA+ ++ +M+ VKP +TF+ +LSAC +
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 195 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA----IWGS 249
G+ + +I++S GI+ ++++ R G L EA+ + FE A W S
Sbjct: 450 GKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNV-----FEGTQARDVISWNS 502
Query: 250 LLAASNIYGDVELGECALQHLI--KLEPHNSGNYAILSNI---------YAILGRWNESG 298
++A +G E Q + +LEP N ++LS I GR ESG
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+ N++++ Y K GDL AR +F ++ ++V+S+ T++ YAQ E + LF +M E
Sbjct: 164 RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSE 223
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD++ + L A ++ G+ IH + GLN+ + + AL+ M + G + A
Sbjct: 224 GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
Q F+ + ++ V+ + +IA LA HG EA + + RM V N T+++IL+AC
Sbjct: 284 KQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+E G+ + + S G ++ +I + R G L +A +L MP + + W +
Sbjct: 344 KALEAGKLIHSHI-SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNA 401
Query: 250 LLAA 253
++A
Sbjct: 402 IIAG 405
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y K + +A +F+ M ++VISW +LI+ YAQ +A LF MQ
Sbjct: 66 NLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI 125
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P++I ++ L+AC +E G+ IH+ I + G + N+L+ MY K G + +A QV
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F + + V+++ TM+ A +E L +F +M + P+++T+I +L A ++
Sbjct: 186 FAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G+R + G+ I ++ + R G + A++ + + + + ++ +L+A
Sbjct: 246 DEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIA 303
Query: 253 ASNIYG 258
A +G
Sbjct: 304 ALAQHG 309
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 67 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
Q + D +A L C + + + IH + + G+ + L+N LI+MY K +
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A QVF+ M + VI+W ++I+ A G ++A +F M+ A PN+IT+I+IL+AC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 187 CHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
+E G++ + I+K+ Y +P+++ ++ + G+ G L A ++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF 186
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 212/346 (61%), Gaps = 17/346 (4%)
Query: 11 FWNTMVAGYAKVGDLNN------ARALFELMTEKNVISWTTLIAGYAQMDQP-------- 56
+NT+++ A + + +R L + N ++ +L QP
Sbjct: 73 LYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGS--QPWLRHDIFL 130
Query: 57 -NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 115
+TLF MQ +K +E+ ++A +SACA+LGA+ G W H Y+ ++ L + A
Sbjct: 131 IKSVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTA 190
Query: 116 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 175
LIDMY+K G + A Q+F+ + ++ + + MI G A+HG G +ALD+F +M + P+
Sbjct: 191 LIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPD 250
Query: 176 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 235
++T + + +C HVGLVE G F MK YG+EPK+E YGC++DLLGRAG L+EAE+ +
Sbjct: 251 DVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERV 310
Query: 236 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 295
MP + NA IW SLL A+ ++G++E+GE L+HLI+LEP SGNY +LSN+YA + RW+
Sbjct: 311 LNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWD 370
Query: 296 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 341
+ ++RK+M+D G+ K+PG S +EV +HEF+ GD +HP +Y
Sbjct: 371 DVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIY 416
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 219/340 (64%), Gaps = 20/340 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+AGY K G++ A LF+ M E++++S +I GY + E ++L +
Sbjct: 178 WNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGK-----EMLSL-------GL 225
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKAL 130
+PD A+++ LSA A LG VE G+W+H Y+ + + +ALIDMY+K G I A
Sbjct: 226 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 285
Query: 131 QVFENMKNKSVI-TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
VF ++ ++ I W +MI+GLA+HGL REALD+F MER ++PNEITF+ +LS C H
Sbjct: 286 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 345
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
GLVE G+ YF M +Y I P+I+ YGCMIDL GRAG L++A +++ MPFEA+ W +
Sbjct: 346 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 405
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
+L+AS +G +E+G+ A I+L P +S +Y +LSNIYA GRW++ KIR +MR GV
Sbjct: 406 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 465
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY--QILCKI 347
KK+ GCS + V+ +VHEF+ G + D Y Q+L KI
Sbjct: 466 KKIAGCSSMLVNGKVHEFLLG----KELDSSYSGQVLAKI 501
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 31/295 (10%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
FT+SRL+ + G L+ A ++F + N + LI G++ P E++
Sbjct: 39 FTVSRLI-----AFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLI 93
Query: 62 LFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
L+ RM + E ++ + L AC +L A + G +H + + L + N+++ M
Sbjct: 94 LYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM 153
Query: 120 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARV------ 172
Y G+I A +VF+ M N+ V++W +MIAG G A ++F M ER V
Sbjct: 154 YIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMI 213
Query: 173 ------------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG-CMI 219
+P+ +++LSA +G VE G ++ + S IE G +I
Sbjct: 214 DGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEG-KWLHAYVSMNKIELSSGFIGSALI 272
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
D+ + GY++ A + R + N W S+++ I+G L AL +++E
Sbjct: 273 DMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LAREALDIFVEME 324
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 219/346 (63%), Gaps = 6/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
N ++ Y+K AR +F + E+NV++WT +I GYAQ N+A+ LF M +
Sbjct: 446 NALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKP 505
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDMYAKSGKI 126
V P+ + L ACA L ++ +G+ IH Y+ ++ +++ + N LIDMY+K G +
Sbjct: 506 YAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDV 565
Query: 127 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 186
A VF++M ++ ++WT+M++G +HG G+EALD+F +M++A P++I+F+ +L AC
Sbjct: 566 DTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625
Query: 187 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 246
H G+V+ G YF+IM+S YG+ + Y C+IDLL R+G L +A K ++ MP E +AAI
Sbjct: 626 SHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAI 685
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 306
W +LL+A ++ +VEL E AL L+ ++ N G+Y ++SNIYA RW + +IR++M+
Sbjct: 686 WVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKK 745
Query: 307 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G+KK PGCS+++ K F GD SHP +Y +L ++ G++K
Sbjct: 746 SGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 62/334 (18%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRM--- 66
N +VA Y++ G L +A +F+ +T K +VISW +++A + + P A+ LF M
Sbjct: 188 NALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTI 247
Query: 67 ---QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK- 122
+ N + D I+++ L ACA L A+ + IH+Y + G + NALID YAK
Sbjct: 248 VHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKC 307
Query: 123 ------------------------------SGKIGKALQVFENMKNKS----VITWTTMI 148
SGK G A ++F+NM+ ++ VITW+ +I
Sbjct: 308 GSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVI 367
Query: 149 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG--RRYFNIMKSRY 206
AG A G G+EALD F +M +PN +T I++LSAC +G + G +++ K
Sbjct: 368 AGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLL 427
Query: 207 GIEPKIEQ---------YGCMIDLLGRAGYLQEAEKLLRRMP-FEANAAIWGSLLAASNI 256
++ + +ID+ + + A + +P E N W ++
Sbjct: 428 SLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQ 487
Query: 257 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 290
YGD +I S YA+ N Y I
Sbjct: 488 YGDSNDALKLFSEMI------SKPYAVAPNAYTI 515
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 8 LYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
+Y N ++ Y+K GD++ AR +F+ M ++N +SWT++++GY + EA+ +F +MQ
Sbjct: 548 VYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQ 607
Query: 68 VENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
PD+I+ L L AC+ G V+ G ++ YG+ +ID+ A+SG++
Sbjct: 608 KAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRL 667
Query: 127 GKALQVFENMK-NKSVITWTTMIAGLALH 154
KA + + M S W +++ +H
Sbjct: 668 DKAWKTIQEMPMEPSAAIWVALLSACRVH 696
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+VA Y G ++A ++ E + + W L+ + + + + AI + RM KPD
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+ AL AC +L + G H I G + V + NAL+ MY++SG + A VF+
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 135 NMKNK---SVITWTTMIAGLALHGLGREALDMFSRM-----ERARVKPNE-ITFIAILSA 185
+ K VI+W +++A R ALD+FS M E+A + ++ I+ + IL A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C + + + + R G +ID + G +++A + M F+ +
Sbjct: 269 CASLKALPQTKE-IHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK-DVV 326
Query: 246 IWGSLL 251
W +++
Sbjct: 327 SWNAMV 332
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 98 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 157
H+Y+ L T ++ Y G AL V E + + W ++ G
Sbjct: 77 HSYVSPKSLGT------GVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRL 130
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
A+ + RM RA KP+ T L AC + G + ++ G E +
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCN-GFESNVFVCNA 189
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEA--NAAIWGSLLAA 253
++ + R+G L++A + + + + W S++AA
Sbjct: 190 LVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA 227
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 222/350 (63%), Gaps = 7/350 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV--- 68
WN ++ GYAK DL +AR +F M +++V+SW+ +I G + + EA+ LF M+
Sbjct: 130 WNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHREALALFEMMEAAGA 189
Query: 69 -ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
V+ +++ M++ L ACA LG + G +H Y++++G + L +L+DMYAK G I
Sbjct: 190 GNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLATSLVDMYAKCGAIS 249
Query: 128 KALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 185
+AL+VF + V+ W +I GLA+HGL E++++F M+ + V P+EIT++ +LSA
Sbjct: 250 EALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGVVPDEITYLVLLSA 309
Query: 186 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 245
C H GLV R F ++ + G+ P +E Y C++D+LGRAG+L+EA +++ MP E N +
Sbjct: 310 CVHGGLVGEAWRLFRSLEVQ-GLRPHVEHYACLVDVLGRAGHLEEAYGVVKSMPMEPNVS 368
Query: 246 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 305
+ G+LL A +++G VELGE + L++L+P + G Y LSNIYAI RW E+ K RKVM
Sbjct: 369 VLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIARRWQEAKKARKVME 428
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
+ GVKK+PG S I+V R+H F+A D +H +Y +L I +MK +
Sbjct: 429 ERGVKKIPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLNLITVEMKMKD 478
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 206/339 (60%), Gaps = 3/339 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV---E 69
N+M++GY G + ARA+F+ M K+ +W+ +I GY + EA+ +FR M +
Sbjct: 193 NSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNS 252
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
V+P+E A++++LSA A LGA++ G WIH YI + G + L L+DMYAK G I +
Sbjct: 253 GVQPNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCS 312
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
++F M+ + V+TW M++G A+HG R+ +F M +PNE+ F+AILSAC H
Sbjct: 313 YKLFREMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHA 372
Query: 190 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
G +ELG YFN M + +GI P +E YGCM+DLLGRAG L EAE+L+ MP E A IWG+
Sbjct: 373 GYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGA 432
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 309
LL+A I+ D+ G A + L++LEP Y + +++ G E+ + + +++ +
Sbjct: 433 LLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENEL 492
Query: 310 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 348
+ G S+IE++ VHEFV GD H +Y++ IN
Sbjct: 493 ETTRGSSFIEINGVVHEFVVGDADHHKAREMYRMWEGIN 531
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 2 FTLSRLLYKFWNT--MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 59
F +S LL + N ++ Y + + A +F + +V ++ +I G + P ++
Sbjct: 48 FIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLGNCPYDS 107
Query: 60 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 119
+ L+ ++ + + PD L C+ L A+ G+ +H + + G+ ++ +LI M
Sbjct: 108 LLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHM 167
Query: 120 YAKS-------------------------------GKIGKALQVFENMKNKSVITWTTMI 148
YAKS G + KA +F+ M K TW+ MI
Sbjct: 168 YAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMI 227
Query: 149 AGLALHGLGREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 205
G +G+ EAL MF M + V+PNE ++ LSA +G ++ G R+ + R
Sbjct: 228 TGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQG-RWIHAYIRR 286
Query: 206 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
G + I ++D+ + G + + KL R M + + WG +++ ++G
Sbjct: 287 IGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQ-QRDVVTWGVMMSGFAMHG 338
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 42/168 (25%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W M++G+A G AR F+L E ++AG
Sbjct: 327 WGVMMSGFAMHG---QARKCFQLFDE--------MVAG--------------------GT 355
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKIG 127
+P+E+ +A LSAC+ G +ELG H+Y Q +G+ V ++D+ ++G++
Sbjct: 356 RPNEVIFVAILSACSHAGYLELG---HHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLA 412
Query: 128 KALQVFENM-KNKSVITWTTMIAGLALHG---LGREALDMFSRMERAR 171
+A ++ +M + + + W +++ +H GR A ++E R
Sbjct: 413 EAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLR 460
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 206/334 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+++ +++ AR LF+ +EK V +W +I+GYAQ AI+LF+ M P+ + +
Sbjct: 350 YSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ LSACAQLGA+ G+ +H I+ L + ++ ALIDMYAK G I +A Q+F+
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ +TW TMI G LHG G EAL +F+ M +P+ +TF+++L AC H GLV G
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F+ M ++Y IEP E Y CM+D+LGRAG L++A + +R+MP E A+WG+LL A I+
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHK 589
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
D L A + L +L+P N G Y +LSNIY++ + ++ +R+ ++ + K PGC+ I
Sbjct: 590 DTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLI 649
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
EV+ H FV GD SH +Y L ++ G+M+
Sbjct: 650 EVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMR 683
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
+++ ++K D++ AR LF ++ + +++S+ LI+G++ + A+ FR + V +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
M+ + + G + L I + + G ++ AL +Y++ +I A Q+F+
Sbjct: 305 SSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD 364
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
K+V W MI+G A GL A+ +F M PN +T +ILSAC +G +
Sbjct: 365 ESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSF 424
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ ++KS+ +E I +ID+ + G + EA +L + E N W +++
Sbjct: 425 GKSVHQLIKSK-NLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGY 482
Query: 255 NIYG 258
++G
Sbjct: 483 GLHG 486
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 3 TLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 62
T+++L K ++ VG +ARALF + + ++ + LI G++ P+ +
Sbjct: 42 TVTKLTQKLFD--------VGATRHARALFFSVPKPDIFLFNVLIKGFSF--SPDASSIS 91
Query: 63 FRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 120
F ++N + PD A+SA LG +H + G ++ + + +AL+D+Y
Sbjct: 92 FYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVASALVDLY 148
Query: 121 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 180
K ++ A +VF+ M ++ + W TMI GL + +++ +F M V+ + T
Sbjct: 149 CKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVA 208
Query: 181 AILSACCHVGLVELG 195
+L A + V++G
Sbjct: 209 TVLPAVAEMQEVKVG 223
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 136/328 (41%), Gaps = 46/328 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K + AR +F+ M +++ + W T+I G + ++++ +F+ M + V+
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + L A A++ V++G I + G + + LI +++K + A +
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS-------- 184
F ++ ++++ +I+G + +G A+ F + + + + T + ++
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321
Query: 185 --ACCHVGL-------------------------VELGRRYFNIMKSRYGIEPKIEQYGC 217
ACC G ++L R+ F+ E + +
Sbjct: 322 HLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD-----ESSEKTVAAWNA 376
Query: 218 MIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
MI ++G + A L + M F N S+L+A G + G+ ++ LIK +
Sbjct: 377 MISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSK 435
Query: 275 PHNSGNY--AILSNIYAILGRWNESGKI 300
Y L ++YA G +E+ ++
Sbjct: 436 NLEQNIYVSTALIDMYAKCGNISEASQL 463
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 218/352 (61%), Gaps = 4/352 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+ ++ GY K+GD+ +AR +F +M ++V++WT +I GY Q + +EAI LFR M
Sbjct: 368 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 427
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P+ + A LS CA L ++ G+ IH + L ++NA+I MYA+SG A +
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARR 487
Query: 132 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+F+ + K ITWT+MI LA HG G EA+ +F M RA V+P+ IT++ +LSAC H G
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
V G+RY++ +K+ + I P++ Y CM+DLL RAG EA++ +RRMP E +A WGSL
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSL 607
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A ++ + EL E A + L+ ++P+NSG Y+ ++N+Y+ GRW+++ +I K ++ V+
Sbjct: 608 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 667
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQN 359
K G S+ + ++H F A D HP D +Y + ++ ++K F LQ+
Sbjct: 668 KETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQS 719
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 37/310 (11%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN MV+ +G ++ A +LFE M ++++SW +IAGY Q +A+ LF RM E+
Sbjct: 233 WNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS 292
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 124
+ PDE + + LSACA LG V +G+ +H YI + + + NALI YAKSG
Sbjct: 293 MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENAR 352
Query: 125 ------------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLG 157
KIG A ++F M N+ V+ WT MI G +G
Sbjct: 353 RIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRN 412
Query: 158 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 217
EA+D+F M +PN T A+LS C + ++ G++ + R +E
Sbjct: 413 DEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSLLERSSSVSNA 471
Query: 218 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 275
+I + R+G A ++ ++ + W S++ A +G E + +++ +EP
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Query: 276 HNSGNYAILS 285
+LS
Sbjct: 532 DRITYVGVLS 541
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 145/284 (51%), Gaps = 36/284 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ +AK G L +AR +F M E++ +SWT ++ G + + EAI M +
Sbjct: 101 WNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-------- 123
P + + LS+CA A +G +H+++ + GL + VP+ N++++MY K
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETAST 220
Query: 124 -----------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
G++ A +FE+M +S+++W MIAG +GL +A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKA 280
Query: 161 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 218
L +FSRM + + P+E T ++LSAC ++G V +G++ + I+++ ++ +
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--AL 338
Query: 219 IDLLGRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 261
I ++G ++ A +++ + M + N + +LL GD+E
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 214/348 (61%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ Y + G + ++ +FE M +++I+W T+IA + N + + RM+ E V
Sbjct: 291 WNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGV 350
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD ML+ L C+ L A G+ IH I + GL + VP+ N LI+MY+K G + + Q
Sbjct: 351 TPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQ 410
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ MK K V+TWT +I+ ++G G++A+ F ME A + P+ + F+AI+ AC H GL
Sbjct: 411 VFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGL 470
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
VE G YF+ MK Y IEP+IE Y C++DLL R+ L +AE + MP + +++IWG+LL
Sbjct: 471 VEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALL 530
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A + GD E+ E + +I+L P ++G Y ++SNIYA LG+W++ IRK ++ G+KK
Sbjct: 531 SACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKK 590
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS++E+ +V+ F G F+ + ++L + G M ++ N
Sbjct: 591 DPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIAN 638
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA-------ITLFRR 65
N ++ Y + DL+ AR +FE M ++V+SW +LI+GY NEA I LF
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213
Query: 66 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--- 122
M V KPD + + + L AC LG +E G+++H+Y+ G +N LI+MYAK
Sbjct: 214 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272
Query: 123 ----------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALH 154
+GK+G +L+VFENMK + +ITW T+IA
Sbjct: 273 LLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332
Query: 155 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 214
L M SRM V P+ T ++IL C + G+ + + G+E +
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLESDVPV 391
Query: 215 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 259
+I++ + G L+ + ++ + M + + W +L++A +YG+
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE 435
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 132/254 (51%), Gaps = 12/254 (4%)
Query: 11 FWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
F ++A YA D ++ ++F L + NV W ++I +EA++L+ Q
Sbjct: 50 FSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRI 109
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
++PD + ++ACA L E+ + IH+ + G + + + NALIDMY + + KA
Sbjct: 110 RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKA 169
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-----MERA-RVKPNEITFIAIL 183
+VFE M + V++W ++I+G +G EAL+++ + ME + KP+ +T +IL
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSIL 229
Query: 184 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 243
AC H+G +E G+ + M + G E +I++ + G L ++++ M + +
Sbjct: 230 QACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-D 287
Query: 244 AAIWGSLLAASNIY 257
+ W S++ N+Y
Sbjct: 288 SVSWNSMI---NVY 298
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 208/317 (65%), Gaps = 1/317 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W+TM+ GYAK+G ++ A+ LF+ M ++V+S+ ++IAGY Q EA+ +F M+ E +
Sbjct: 290 WSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESH 349
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
+ PDE ++ LSA AQLG + +H YI + L ALIDMY+K G I A+
Sbjct: 350 LSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAM 409
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ ++NKS+ W MI GLA+HGLG A DM ++ER +KP++ITF+ +L+AC H G
Sbjct: 410 LVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSG 469
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G F +M+ ++ IEP+++ YGCM+D+L R+G ++ A+ L+ MP E N IW +
Sbjct: 470 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTF 529
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
LAA N + + E GE +HLI +N +Y +LSN+YA G+W + +IR +M++ ++
Sbjct: 530 LAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIE 589
Query: 311 KMPGCSYIEVSKRVHEF 327
K+PGCS+IE+ RVHEF
Sbjct: 590 KVPGCSWIELDGRVHEF 606
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 148/269 (55%), Gaps = 21/269 (7%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTE--KNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+N+M+ GY K G +AR LF+LM E KN+ISW ++I+GYAQ ++ + + ++ E
Sbjct: 194 YNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQT---SDGVDIASKLFSE 250
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
D I+ + + + G +E +++ + + + + T + +ID YAK G + +A
Sbjct: 251 MPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTW----STMIDGYAKLGFVHQA 306
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCH 188
+F+ M ++ V+++ +MIAG + EAL++FS ME+ + + P+E T + +LSA
Sbjct: 307 KTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQ 366
Query: 189 VG-LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI- 246
+G L + + I++ ++ + K+ +ID+ + G +Q A + + + N +I
Sbjct: 367 LGRLSKAMDMHLYIVEKQFFLGGKLGV--ALIDMYSKCGSIQHAMLVFKGI---ENKSID 421
Query: 247 -WGSLLAASNIYGDVELGECALQHLIKLE 274
W +++ I+G LGE A L+++E
Sbjct: 422 HWNAMIGGLAIHG---LGESAFDMLLQIE 447
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 43 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 102
W +I ++ P A+ LF M V D+ ++ L AC++LG V+ G IH +++
Sbjct: 93 WNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLK 152
Query: 103 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 162
+ GL + + L N LI +Y K G +G A Q+F+ M + +++ +MI G G A +
Sbjct: 153 KTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARE 212
Query: 163 MFSRMERARVKPNEITFIAILSACCHVGL-VELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M N I++ +++S V++ + F+ M + + + MID
Sbjct: 213 LFDLMPEEM--KNLISWNSMISGYAQTSDGVDIASKLFSEMPDK-----DLISWNSMIDG 265
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ G +++A+ L MP + W +++
Sbjct: 266 YVKHGRIEDAKYLFDVMP-RRDVVTWSTMI 294
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 208/348 (59%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GD ++A LF M ++++W +IAGY Q +A+ +F M
Sbjct: 195 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 254
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P +++ LSA + L + G WIH+Y+E+ G L +LI+MYAK G I AL
Sbjct: 255 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 314
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K V WT +I GL +HG+ AL +F M + +KPN I FI +L+AC H GL
Sbjct: 315 VFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 374
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF++M + Y IEP +E YGC++D+L RAG+L+EA+ + MP N IW SLL
Sbjct: 375 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 434
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
S +G +++GE A Q +I++ P G Y +LSN+YA G W + +R++M G +K
Sbjct: 435 GGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRK 494
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS +E +HEF+ GD SHP +Y + ++ ++K H+ +
Sbjct: 495 DPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 542
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 53/300 (17%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SRLL + + K+ DL AR++F+ + +++I W T+I Y + ++ I
Sbjct: 49 FVSSRLLALYSD------PKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIV 102
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LF + V PD + + CA+LG V+ G+ IH + G + V + +L++MY+
Sbjct: 103 LFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYS 161
Query: 122 KSGKIGKALQVFENMKNKSV---------------------------------------- 141
K G+I A +VF+ M +K V
Sbjct: 162 KCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIW 221
Query: 142 --ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RY 198
+TW MIAG L+G +A+ MF M + +P+ T +++LSA GL LG+ R+
Sbjct: 222 DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS--GLAVLGKGRW 279
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ + G E +I++ + G ++ A + R + + W +++ I+G
Sbjct: 280 IHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIVGLGIHG 338
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 207/313 (66%), Gaps = 2/313 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYAKVG+L A+ LF M ++VISWT++I GY+ Q EA+ LF+ M V V
Sbjct: 242 WNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMV 301
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KPDEI + ALSACA LG+++ GE +H+YI ++ + + V + N+LIDMY K G + KALQ
Sbjct: 302 KPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQ 361
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF +MK + ++WT++I+GLA++G AL++F +M + + P TF+ +L AC HVGL
Sbjct: 362 VFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGL 421
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +F M++ Y + P+++ YGC++DLL R+GYL A +++MP + IW LL
Sbjct: 422 VDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILL 481
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
+A ++G++ L E + L+ L+P N+GNY + S+ YA RW++ KIRK+M ++K
Sbjct: 482 SACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQK 541
Query: 312 MPGCSYIEVSKRV 324
C+Y + R+
Sbjct: 542 --PCAYSSIEVRI 552
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 148/291 (50%), Gaps = 33/291 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N ++ Y G+L A+ +F+ M E++V+SW ++I GY Q ++ + + LFR MQ NV+
Sbjct: 111 NALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVR 170
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D + M+ A+SA L E+G+++ YI+++G+ + L N LIDMY + G I A +V
Sbjct: 171 ADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRV 230
Query: 133 FENMKNKS-------------------------------VITWTTMIAGLALHGLGREAL 161
F MK K+ VI+WT+MI G +L EA+
Sbjct: 231 FYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAV 290
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+F M + VKP+EIT LSAC H+G ++ G + ++ ++ I+ + +ID+
Sbjct: 291 KLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIR-KHDIKSDVFVGNSLIDM 349
Query: 222 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 272
+ G +++A ++ M ++ W S+++ + G E ++K
Sbjct: 350 YCKCGVVEKALQVFNDMK-TRDSVSWTSIISGLAVNGFAESALNVFDQMLK 399
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A +F + ++ W +I G ++ D+PN+AI + M + ++ + + +
Sbjct: 22 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 81
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
CA++ V G+ + + + G + ++NALI MY G++ A +VF+ M + V++W
Sbjct: 82 CARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSW 141
Query: 145 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 204
++I G ++ LD+F M+ V+ + +T + +SA C + E+G Y
Sbjct: 142 NSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG-DYLVKYID 200
Query: 205 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+G+ + +ID+ GR G + A ++ +M E N W +++
Sbjct: 201 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMK-EKNIVSWNAMI 246
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 218/345 (63%), Gaps = 5/345 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QV 68
N ++ YAK AR++F+ + +KNV++WT +I GYAQ + N+A+ LF ++ Q
Sbjct: 416 NGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQK 475
Query: 69 ENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIG 127
++KP+ + AL ACA+LG + LG +H Y + + ++ + N LIDMY+KSG I
Sbjct: 476 TSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDID 535
Query: 128 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 187
A VF+NMK ++V++WT+++ G +HG G EAL +F +M++ + ITF+ +L AC
Sbjct: 536 AARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACS 595
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
H G+V+ G YF+ M +GI P E Y CM+DLLGRAG L EA +L++ M E A +W
Sbjct: 596 HSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVW 655
Query: 248 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 307
+LL+AS I+ ++ELGE A L +L N G+Y +LSN+YA RW + +IR +M+
Sbjct: 656 VALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHT 715
Query: 308 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
G++K PGCS+I+ K F GD SHP+ +++Y +L + ++K
Sbjct: 716 GIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIK 760
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 26/270 (9%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKN----VISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WN MV GY+++G ++A +LF++M E++ VI+W+ +IAGYAQ EA+ +FR+MQ
Sbjct: 303 WNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQ 362
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----------NAL 116
+ ++P+ + + + LS CA +GA+ G+ H Y+ + I+ LN N L
Sbjct: 363 LYGLEPNVVTLASLLSGCASVGALLYGKQTHAYV----IKNILNLNWNDKEDDLLVLNGL 418
Query: 117 IDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARV 172
IDMYAK A +F+++ K+K+V+TWT MI G A HG +AL +F+++ ++ +
Sbjct: 419 IDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 478
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG-CMIDLLGRAGYLQEA 231
KPN T L AC +G + LGR+ + R E ++ G C+ID+ ++G + A
Sbjct: 479 KPNAFTLSCALMACARLGELRLGRQ-LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAA 537
Query: 232 EKLLRRMPFEANAAIWGSLLAASNIYGDVE 261
+ M N W SL+ ++G E
Sbjct: 538 RAVFDNMKLR-NVVSWTSLMTGYGMHGRGE 566
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 41/226 (18%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEK---NVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
N++VA Y + G L++A +F+ + E+ +++SW +++A Y Q Q A+ + RM
Sbjct: 166 NSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNH 225
Query: 70 ---NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 126
++PD I ++ L ACA + A++ G+ +H + + GL V + NAL+ MYAK K+
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285
Query: 127 GKALQVFENMKNK-----------------------------------SVITWTTMIAGL 151
+A +VFE +K K VITW+ +IAG
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 197
A G G EALD+F +M+ ++PN +T ++LS C VG + G++
Sbjct: 346 AQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQ 391
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 114/254 (44%), Gaps = 10/254 (3%)
Query: 16 VAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
V Y + G A +L + + + V W LI ++ ++ + + +MQ P
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D L AC ++ ++ G +H + GL + V + N+++ MY + G + A Q+F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 134 ENM---KNKSVITWTTMIAGLALHGLGREALDMFSRMERA---RVKPNEITFIAILSACC 187
+ + K + +++W +++A G R AL + RM +++P+ IT + IL AC
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 188 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 247
V ++ G++ R G+ + ++ + + + EA K+ + + + W
Sbjct: 246 SVFALQHGKQVHG-FSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVSW 303
Query: 248 GSLLAASNIYGDVE 261
+++ + G +
Sbjct: 304 NAMVTGYSQIGSFD 317
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 208/348 (59%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GY K GD ++A LF M ++++W +IAGY Q +A+ +F M
Sbjct: 243 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 302
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+P +++ LSA + L + G WIH+Y+E+ G L +LI+MYAK G I AL
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 362
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ K V WT +I GL +HG+ AL +F M + +KPN I FI +L+AC H GL
Sbjct: 363 VFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 422
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ GR+YF++M + Y IEP +E YGC++D+L RAG+L+EA+ + MP N IW SLL
Sbjct: 423 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 482
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
S +G +++GE A Q +I++ P G Y +LSN+YA G W + +R++M G +K
Sbjct: 483 GGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRK 542
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS +E +HEF+ GD SHP +Y + ++ ++K H+ +
Sbjct: 543 DPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 590
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 23/302 (7%)
Query: 2 FTLSRLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 61
F SRLL + + K+ DL AR++F+ + +++I W T+I Y + ++ I
Sbjct: 46 FVSSRLLALYSD------PKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIV 99
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LF + V PD + + CA+LG V+ G+ IH + G + V + +L++MY+
Sbjct: 100 LFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYS 158
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G+I A +VF+ M +K V+ W ++I G A G AL +F M R + +
Sbjct: 159 KCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE-RDAFSWTVLVD 217
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
LS C G VE R+ F+ M R + + MI+ ++G A +L +MP
Sbjct: 218 GLSKC---GKVESARKLFDQMPCR-----NLVSWNAMINGYMKSGDFDSALELFYQMPI- 268
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPHNSGNYAILSNI--YAIL--GRWN 295
+ W ++A + G ++KL P ++ ++LS + A+L GRW
Sbjct: 269 WDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWI 328
Query: 296 ES 297
S
Sbjct: 329 HS 330
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 14 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 73
++V Y+K G+++ AR +F+ M +K+V+ W +LI GYA+ + + A+ LF M E
Sbjct: 152 SLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP-ERDAF 210
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
++ LS C ++ E +Q +V NA+I+ Y KSG AL++F
Sbjct: 211 SWTVLVDGLSKCGKV------ESARKLFDQMPCRNLVSW-NAMINGYMKSGDFDSALELF 263
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
M ++TW MIAG L+G +A+ MF M + +P+ T +++LSA GL
Sbjct: 264 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV--SGLAV 321
Query: 194 LGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
LG+ R+ + + G E +I++ + G ++ A + R + + W +++
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIV 380
Query: 253 ASNIYG 258
I+G
Sbjct: 381 GLGIHG 386
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 210/333 (63%), Gaps = 1/333 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++G ++ L++AR +FE M +++V+SWT +I+ Y Q A+ LF M +
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
KP+++ + + LSAC LGA++LGE H I + G +T + + N+LI MY K G
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFC 742
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VFE M +ITW ++ G A +GLG+EA+ +F +ME + P++++F+ +L AC H GL
Sbjct: 743 VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGL 802
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G +FN M +YGI P + Y CM+DLLGRAGYL EAE L+ MP + ++ IW +LL
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
A I+ +VELG+ + L ++ S Y +LSN++A G W++ +IRK+M+D G+ K
Sbjct: 863 GACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTK 922
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 344
PG S+I+V ++H FV GD +H + +Y L
Sbjct: 923 EPGISWIQVKNKLHCFVTGDRTHDQIEEIYSAL 955
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 37/294 (12%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN ++AGY + G L A+ LF+ M KN SW +IAG+ Q ++ EA+ L +
Sbjct: 492 WNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGS 551
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI----- 126
P + + +ALSACA +G VE+G IH+ + G + N LI MYAK G +
Sbjct: 552 VPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSH 611
Query: 127 --------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
A VFE M + V++WT +I+ G G A
Sbjct: 612 VFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVA 671
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
LD+F M +KPN++T ++LSAC ++G ++LG + F+ + + G + + +I
Sbjct: 672 LDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLIT 730
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
+ + GY ++ + MP E + W ++L G LG+ A++ ++E
Sbjct: 731 MYFKCGY-EDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIKIFEQME 779
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 159/339 (46%), Gaps = 50/339 (14%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN- 70
WN M++GY + GDL NAR LF+ M EKNV SW +++ GY + +EA LF +M N
Sbjct: 267 WNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNS 326
Query: 71 ------------------------------VKPDEIAMLAALSACAQLGAVELGEWIHNY 100
+PD+ + LSA L +EL +
Sbjct: 327 VSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPI 386
Query: 101 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ G V + +A+++ Y ++G + A+ FE M ++ +WTTMIA A G +A
Sbjct: 387 AIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDA 446
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
+ ++ R+ V T A+++A VG ++ R F+ + + P + + +I
Sbjct: 447 IQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIA 497
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 280
+ G L+EA+ L ++MP + N+A W +++A + E AL+ LI+L H SG+
Sbjct: 498 GYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAG---FVQNEESREALELLIEL--HRSGS 551
Query: 281 YAILSNIYAILGRWNESG--KIRKVMRDMGVKKMPGCSY 317
S+ + L G +I +V+ + +K GC +
Sbjct: 552 VPSDSSFTSALSACANIGDVEIGRVIHSLAIKT--GCQF 588
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 17/284 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY++ G ++ AR LF+ KN+ +WT L+ GYA+ + EA +F M NV
Sbjct: 205 WNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNV 264
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A +S Q G ++ + + + + + + N+++ Y ++ +A +
Sbjct: 265 ----VSWNAMISGYVQNGDLKNARKLFDEMPEKNVASW----NSVVTGYCHCYRMSEARE 316
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M ++ ++W MI+G EA D+F +M R +P++ F+ +LSA +
Sbjct: 317 LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376
Query: 192 VEL--GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 249
+EL R I + G E + +++ R G L A MP E N W +
Sbjct: 377 LELIGSLRPIAI---KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTT 432
Query: 250 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 293
++AA G + + A+Q ++ + YA +GR
Sbjct: 433 MIAAFAQCGRL---DDAIQLYERVPEQTVATKTAMMTAYAQVGR 473
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 220/349 (63%), Gaps = 1/349 (0%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
M+ GY K G + A +F+ M KN+++W ++IAGY + + + + +F+ M V+P+
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ + L C+ L A+ LG +H + + L+ +LI MY K G + A ++F
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFL 354
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
M K VI+W MI+G A HG GR+AL +F +M +KP+ ITF+A++ AC H G V+L
Sbjct: 355 EMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDL 414
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G +YF MK +GIE K Y C+IDLLGRAG L EA L++ MPF+ +AAI+G+LL A
Sbjct: 415 GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGAC 474
Query: 255 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 314
I+ +++L E A ++L+ L+P ++ Y L+NIYA +W++ K+RK+M++ V K+PG
Sbjct: 475 RIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPG 534
Query: 315 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN-EFS 362
S+IE+ HEF + D HP+ +++ L +++G+MK A ++ + EF+
Sbjct: 535 YSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFA 583
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
+N M+ Y + + A A F M K++ SW TLI+G+AQ Q +A LF M +N
Sbjct: 139 YNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN- 197
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
++ A +S + G +E E ++ + G+ ++V + A++ Y K GK+ A +
Sbjct: 198 ---GVSWSAMISGYVEHGDLEAAEELYKNV---GMKSVV-VETAMLTGYMKFGKVELAER 250
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M K+++TW +MIAG + + L +F M +RV+PN ++ ++L C ++
Sbjct: 251 IFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSA 310
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LGR+ ++ S+ + +I + + G L A KL MP + W +++
Sbjct: 311 LPLGRQMHQLV-SKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMI 368
Query: 252 AASNIYG 258
+ +G
Sbjct: 369 SGYAQHG 375
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ Y K GDL++A LF M K+VISW +I+GYAQ +A+ LF +M+ +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD I +A + AC G V+LG ++ + +++G+ +ID+ ++G++ +A+
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 132 VFENMKNKS-VITWTTMIAGLALH 154
+ + M K + T++ +H
Sbjct: 454 LIKEMPFKPHAAIYGTLLGACRIH 477
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 114 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERARV 172
N I + ++ + A VFE M ++ +TW TM++G + G +EA ++F ++
Sbjct: 77 NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP---- 132
Query: 173 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 232
+P+ +++ +L VE +FN M + I + +I + G +Q+A
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-----DIASWNTLISGFAQNGQMQKAF 187
Query: 233 KLLRRMPFEANAAIWGSLLAASNIYGDVELGE 264
L MP E N W ++++ +GD+E E
Sbjct: 188 DLFSVMP-EKNGVSWSAMISGYVEHGDLEAAE 218
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 206/336 (61%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y+K+ ++ +AR LF+ EK++ SW +I+GY Q +AI+LFR MQ P+ + +
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTI 423
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
LSACAQLGA+ LG+W+H+ + + + ++ ALI MYAK G I +A ++F+ M
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ +TW TMI+G LHG G+EAL +FS M + + P +TF+ +L AC H GLV+ G
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
FN M RYG EP ++ Y C++D+LGRAG+LQ A + + MP + ++W +LL A I+
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHK 603
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
D L + L +L+P N G + +LSNI++ + ++ +R+ + + K PG + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
E+ + H F +GD SHP +++ L K+ G+M+ A
Sbjct: 664 EIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREA 699
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ Y+K G + A LF +++++ +I GY + +++LF+ + + K
Sbjct: 262 FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLK 321
Query: 75 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 134
+++ + L + IH Y + + ++ AL +Y+K +I A ++F+
Sbjct: 322 SSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFD 378
Query: 135 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 194
KS+ +W MI+G +GL +A+ +F M+ + PN +T ILSAC +G + L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSL 438
Query: 195 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 254
G+ ++++S E I +I + + G + EA +L MP + N W ++++
Sbjct: 439 GKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGY 496
Query: 255 NIYG 258
++G
Sbjct: 497 GLHG 500
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 15 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 74
++ YAK G + AR LF+ M +KN ++W T+I+GY EA+T+F M + P
Sbjct: 461 LIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPT 520
Query: 75 EIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
+ L L AC+ G V+ G+ I N I +YG V ++D+ ++G + +ALQ
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFI 580
Query: 134 ENMK-NKSVITWTTMIAGLALH 154
E M W T++ +H
Sbjct: 581 EAMPIQPGPSVWETLLGACRIH 602
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 17/257 (6%)
Query: 6 RLLYKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 65
++ +KFW + +AR +F+ M EK+ I W T+I+GY + + E+I +FR
Sbjct: 162 KMYFKFWR-----------VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 66 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
+ E+ + D +L L A A+L + LG IH+ + G + + I +Y+K G
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
KI A +F + ++ + MI G +G +L +F + + K T ++++
Sbjct: 271 KIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVP 330
Query: 185 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 244
H+ L+ Y +KS + + + + + ++ A KL P E +
Sbjct: 331 VSGHLMLIYAIHGY--SLKSNFLSHTSVST--ALTTVYSKLNEIESARKLFDESP-EKSL 385
Query: 245 AIWGSLLAASNIYGDVE 261
W ++++ G E
Sbjct: 386 PSWNAMISGYTQNGLTE 402
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 20 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAM 78
+ +G + AR +F + +V + L+ G++ + P+ ++ +F + + ++KP+
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTY 122
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
A+SA + G IH G ++ + L + ++ MY K ++ A +VF+ M
Sbjct: 123 AFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 197
K I W TMI+G + + E++ +F + + + + T + IL A + + LG +
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR--RMP--FEANAAIWG 248
+ + ++ G I L + G ++ A L R R P NA I G
Sbjct: 243 -IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHG 296
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 207/326 (63%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK G L+ A +F M EK+ + W +I +Q +P EAI LFR+M E + D +++
Sbjct: 320 YAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSI 379
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AALSACA L A+ G+ IH+++ + ++ V +ALIDMY K G + A VF+ M+
Sbjct: 380 SAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMRE 439
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K+ ++W ++IA HG +L +F +M ++P+ +TF+ ILSAC H G V+ G +Y
Sbjct: 440 KNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQY 499
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
F M YGI ++E Y C++DL GRAG L EA + ++ MPF + +WG+LL A ++G
Sbjct: 500 FRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHG 559
Query: 259 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 318
+VEL E A + L+ L+P NSG Y +LSN++A G+W KIR +M+ GV+K+PG S+I
Sbjct: 560 NVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWI 619
Query: 319 EVSKRVHEFVAGDTSHPDFDRLYQIL 344
EV+K H FVA D SHP+ ++Y +L
Sbjct: 620 EVNKTTHMFVAADGSHPESAQIYSVL 645
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 137/240 (57%), Gaps = 4/240 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N +VA Y+K G L++A LF M + NV++W +IAG+ Q +EA LF M V
Sbjct: 112 NALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVS 171
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD I + L + + +++ G+ IH YI ++G+ V L +ALID+Y K +G A ++
Sbjct: 172 PDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKI 231
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F+ N ++ T +I+G L+GL +AL++F + ++ PN +T ++L AC + +
Sbjct: 232 FKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATL 291
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
LG+ + NI+K +G++ + ++D+ + G L A ++ RRMP E +A W +++
Sbjct: 292 NLGKELHANILK--HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAII 348
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y K D+ A +F+ T +++ T +I+GY N+A+ +FR + E + P+ + +
Sbjct: 219 YFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ L ACA L + LG+ +H I ++GL+ + +A++DMYAK G++ A Q+F M
Sbjct: 279 ASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPE 338
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
K + W +I + +G +EA+D+F +M R + + ++ A LSAC ++ + G+
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAI 398
Query: 199 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 258
+ M + + ++ +ID+ G+ G L A + M E N W S++AA +G
Sbjct: 399 HSFMI-KGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR-EKNEVSWNSIIAAYGSHG 456
Query: 259 DVELGECALQHLIK--LEPHNSGNYAILS 285
+E+ +++ ++P + ILS
Sbjct: 457 HLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
++++ YA+ G + +AR LF+ M K+ + W ++ G+ + +PN A+ +F M+ K
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ I + LS CA E G +H + G + + NAL+ MY+K G++ AL++
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M + +V+TW MIAG +G EA +FS M A V P+ ITF + L + +
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 237
+ G+ + R+GI + +ID+ + + A K+ ++
Sbjct: 191 KQGKEIHGYIL-RHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ 234
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y K G+L+ AR +F++M EKN +SW ++IA Y ++ LF +M + ++
Sbjct: 415 SALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQ 474
Query: 73 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + L LSAC G V+ G ++ E+YG+ + ++D++ ++G++ +A +
Sbjct: 475 PDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFE 534
Query: 132 VFENMK-NKSVITWTTMIAGLALHG 155
+NM + W T++ +HG
Sbjct: 535 TIKNMPFSPDDGVWGTLLGACRVHG 559
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 105 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 164
G N + ++LI +YA++G I A ++F+ M NK + W M+ G G A+ +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 165 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLG 223
M + KPN ITF ++LS C L E G + ++ + +P + ++ +
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYS 119
Query: 224 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ G L +A KL MP + N W ++A
Sbjct: 120 KFGQLSDALKLFNTMP-DTNVVTWNGMIAG 148
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 223/346 (64%), Gaps = 4/346 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE--- 69
T++ Y+ + +A +F+ + +++ +SW L + Y + + + + LF +M+ +
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
VKPD + L AL ACA LGA++ G+ +H++I++ GL+ + L+N L+ MY++ G + KA
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 189
QVF M+ ++V++WT +I+GLA++G G+EA++ F+ M + + P E T +LSAC H
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS 331
Query: 190 GLVELGRRYFNIMKS-RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 248
GLV G +F+ M+S + I+P + YGC++DLLGRA L +A L++ M + ++ IW
Sbjct: 332 GLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWR 391
Query: 249 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 308
+LL A ++GDVELGE + HLI+L+ +G+Y +L N Y+ +G+W + ++R +M++
Sbjct: 392 TLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKR 451
Query: 309 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
+ PGCS IE+ VHEF+ D SHP + +Y++L +IN Q+K A
Sbjct: 452 IHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 24 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAAL 82
D+N + +F + T+I ++ P E LFR ++ + P + ++ AL
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 83 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 142
C + G + G IH I G + L L+D+Y+ A +VF+ + + +
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 143 TWTTMIAGLALHGLGREALDMFSRMER---ARVKPNEITFIAILSACCHVGLVELGRRYF 199
+W + + + R+ L +F +M+ VKP+ +T + L AC ++G ++ G++
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 200 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIY 257
+ + G+ + ++ + R G + +A ++ M E N W +L++ A N +
Sbjct: 241 DFIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGF 298
Query: 258 G 258
G
Sbjct: 299 G 299
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 219/350 (62%), Gaps = 10/350 (2%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEK----------NVISWTTLIAGYAQMDQPNEAIT 61
WN +++ YA+ G + A A F M + NVISW+ +I+G+A + +++
Sbjct: 337 WNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLE 396
Query: 62 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 121
LFR+MQ+ V + + + + LS CA+L A+ LG +H Y + ++ + + N LI+MY
Sbjct: 397 LFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYM 456
Query: 122 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 181
K G + VF+N++ + +I+W ++I G +HGLG AL F+ M RAR+KP+ ITF+A
Sbjct: 457 KCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVA 516
Query: 182 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 241
ILSAC H GLV GR F+ M + + IEP +E Y CM+DLLGRAG L+EA ++R MP E
Sbjct: 517 ILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIE 576
Query: 242 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 301
N +WG+LL + +Y D+++ E ++ L+ +G++ +LSNIYA GRW++S ++R
Sbjct: 577 PNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARVR 636
Query: 302 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
R G+KK+PG S+IEV K+V+ F AG+ H + +Y IL ++N M
Sbjct: 637 VSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELNLHM 686
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 57/325 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 67
WNTMV+GYA D A +F+ M + N ++WT+L++ +A+ +E + LF+ M+
Sbjct: 201 WNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMR 260
Query: 68 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
++ A+ LS CA + V+ G+ IH Y+ + G + + NALI Y K +G
Sbjct: 261 TRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMG 320
Query: 128 KALQVFENMKNKSVI-----------------------------------------TWTT 146
A +VF +KNK+++ +W+
Sbjct: 321 DAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSA 380
Query: 147 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 206
+I+G A G G ++L++F +M+ A+V N +T ++LS C + + LGR + R
Sbjct: 381 VISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRE-LHGYAIRN 439
Query: 207 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-WGSLLAASNIYGDVELGEC 265
+ I +I++ + G +E + + E I W SL+ ++G LGE
Sbjct: 440 MMSDNILVGNGLINMYMKCGDFKEGHLVFDNI--EGRDLISWNSLIGGYGMHG---LGEN 494
Query: 266 ALQHL-----IKLEPHNSGNYAILS 285
AL+ +++P N AILS
Sbjct: 495 ALRTFNEMIRARMKPDNITFVAILS 519
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Query: 15 MVAGYAKVGDLNNARALFE---LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
++A YA+ L++AR +F+ L + +++ W ++I A+ L+ M+
Sbjct: 69 LIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGF 128
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PD + + AC+ LG+ L +H + Q G + + N L+ MY K G++ A Q
Sbjct: 129 LPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQ 188
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+ M +S+++W TM++G AL+ A +F RME ++PN +T+ ++LS+ GL
Sbjct: 189 LFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGL 248
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDL 221
+ F +M++R GIE E ++ +
Sbjct: 249 YDETLELFKVMRTR-GIEIGAEALAVVLSV 277
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 205/340 (60%), Gaps = 25/340 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+MV+GYA+ + AR +F MT++NV+SW LIAGY Q + EA+ LFR ++ E++
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI- 377
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
W +Y L + + + N+LIDMY K G I +V
Sbjct: 378 -----------------------WPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRV 414
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE MK + ++W +I G A +G G EAL +F +M KP+ +T I +L AC H GLV
Sbjct: 415 FEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLV 474
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
E GR YF M+ +G+ P + Y CM+DLLGRAG L EA+ L+ MP +A +WGSLLA
Sbjct: 475 EEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 533
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
A ++G++E+G+ A + L++++P NSG Y +LSN+YA LGRW + ++RK+MR GV K
Sbjct: 534 ACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQ 593
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 352
PGCS+IEV RVH F+ D SHP ++Y +L + QMK
Sbjct: 594 PGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 633
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 126/227 (55%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN++++ K G L+ A LF M E + SW ++++G+AQ D+ E++ F +M E+
Sbjct: 84 WNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDF 143
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+E + +ALSACA L + +G +H + + +T V + +ALIDMY+K G + A +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++++TW ++I +G EAL++F RM + ++P+E+T +++SAC +
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
++ G + + + ++D+ + + EA ++ RM
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 137/260 (52%), Gaps = 20/260 (7%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ ++ Y+K G + A +F M E+N+++W +LI Y Q +EA+ +F RM ++
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 73 PDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE+ + + +SACA L A++ G IH ++ + L NAL+DMYAK K+ +A +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF+ M ++V++ T+M++G A + A MFS+M + N +++ A+++ G
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKM----TQRNVVSWNALIAGYTQNGE 361
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYG-----------CMIDLLGRAGYLQEAEKLLRRMPF 240
E R F ++K R I P +G +ID+ + G +++ ++ +M
Sbjct: 362 NEEALRLFRLLK-RESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMK- 419
Query: 241 EANAAIWGSLLA--ASNIYG 258
E + W +++ A N YG
Sbjct: 420 ERDCVSWNAIIVGYAQNGYG 439
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
P+ L +C + + +H I + + + N LID+Y K + A ++
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 133 FENMKNKSVIT-------------------------------WTTMIAGLALHGLGREAL 161
F+ M ++ T W +M++G A H E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 162 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMID 220
+ F +M R NE +F + LSAC + + +G + ++ KSRY + + +ID
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTD--VYMGSALID 190
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ + G + AE++ M E N W SL+
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLITC 222
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 226/350 (64%), Gaps = 6/350 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ M++GYAKVGD+++AR F+ EK+ W +I+GY Q E++ LFR MQ+ ++
Sbjct: 176 WSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDI 235
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKAL 130
PDE ++ LSACA LGA+E+G WIH ++ Q L + V L+ +L+DMYAK G + A
Sbjct: 236 VPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAK 295
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
++F++M + V+ W MI+G+A+HG G+ AL +F ME+ VKP++ITFIA+ +AC + G
Sbjct: 296 RLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSG 355
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA----I 246
+ G + M S Y I PK E YGC++DLL RAG +EA ++R++ N +
Sbjct: 356 MAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLA 415
Query: 247 WGSLLAASNIYGDVELGECALQHLIKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMR 305
W + L+A +G+ +L E A + +++L+ H +SG Y +LSN+YA G+ +++ ++R +M+
Sbjct: 416 WRAFLSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMK 475
Query: 306 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 355
G K PGCS +E+ + EF+AG+ +HP + ++ +L K++ Q+ + +
Sbjct: 476 IKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQLDYNQ 525
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 84
L A +FE + V + TLI + ++ A+ +F +M +KPD + L A
Sbjct: 57 LTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKA 116
Query: 85 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 144
C G+ IH Y + GL + + N+L+ MY G + A VF+ + + +V++W
Sbjct: 117 CGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSW 176
Query: 145 TTMIAGLALHG-------------------------------LGREALDMFSRMERARVK 173
+ MI+G A G +E+L +F M+ +
Sbjct: 177 SVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIV 236
Query: 174 PNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
P+E F++ILSAC H+G +E+G ++ N +K + + ++D+ + G L+
Sbjct: 237 PDESIFVSILSACAHLGALEIGVWIHQHLNQLKL---VPLSVRLSTSLLDMYAKCGNLEL 293
Query: 231 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 274
A++L M + W ++++ ++GD G+ AL+ +E
Sbjct: 294 AKRLFDSMNMR-DVVCWNAMISGMAMHGD---GKGALKLFYDME 333
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 216/340 (63%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N ++ YAK G + A +F M K++ISW T+I GY++ NEA++LF + E
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + L ACA L A + G IH YI + G + + N+L+DMYAK G + A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ +K +++WT MIAG +HG G+EA+ +F++M +A ++ +EI+F+++L AC H GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+FNIM+ IEP +E Y C++D+L R G L +A + + MP +A IWG+LL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+ DV+L E + + +LEP N+G Y +++NIYA +W + ++RK + G++K
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 735
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PGCS+IE+ RV+ FVAGD+S+P+ + + L K+ +M
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 146/255 (57%), Gaps = 13/255 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+F NT++ Y+K GDL++A+A+F M++++V+S+T++IAGYA+ EA+ LF M+ E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD + A L+ CA+ ++ G+ +H +I++ L + ++NAL+DMYAK G + +A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS-RMERARVKPNEITFIAILSACCH 188
VF M+ K +I+W T+I G + + EAL +F+ +E R P+E T +L AC
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 189 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA-- 245
+ + GR IM++ Y + + ++D+ + G L LL M F+ A+
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANS--LVDMYAKCGAL-----LLAHMLFDDIASKD 564
Query: 246 --IWGSLLAASNIYG 258
W ++A ++G
Sbjct: 565 LVSWTVMIAGYGMHG 579
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 3/227 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++VA Y K +++AR +F+ MTE++VISW ++I GY + +++F +M V ++
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ + CA + LG +H+ + + N L+DMY+K G + A V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++SV+++T+MIAG A GL EA+ +F ME + P+ T A+L+ C L+
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ G+R I ++ G + + ++D+ + G +QEAE + M
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEM 458
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
Y GDL A +F+ + + + W L+ A+ + +I LF++M V+ D
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
+ + L +V GE +H +I + G + N+L+ Y K+ ++ A +VF+ M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 198
+ VI+W ++I G +GL + L +F +M + ++ + T +++ + C L+ LGR
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 199 FNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+I +K+ + E + ++D+ + G L A+ + R M
Sbjct: 319 HSIGVKACFSREDRF--CNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 74 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 133
D + + L CA +++ G+ + N+I G L + L MY G + +A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 134 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 193
+ +K + + W ++ LA G ++ +F +M + V+ + TF + + + V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 194 LGRRYFN-IMKSRYG 207
G + I+KS +G
Sbjct: 213 GGEQLHGFILKSGFG 227
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 207/324 (63%), Gaps = 17/324 (5%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-----------DQPNEAI 60
WN +++GY K GDL +AR +F+ M +NV+S+TT+I GYA+ + P +
Sbjct: 223 WNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDV 282
Query: 61 T-----LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNN 114
+FR NVKPDE M++ +SAC+Q+G++EL +W+ +Y+ + ++ +
Sbjct: 283 VAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA 342
Query: 115 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 174
ALIDM AK G + +A ++FE M + +I++ +M+ GL++HG G +A+ +FSRM + P
Sbjct: 343 ALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTP 402
Query: 175 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 234
+++ F IL+AC GLV+ G YF MK+ Y I P + Y CM+DLLGRAG L+EA +L
Sbjct: 403 DDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYEL 462
Query: 235 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 294
L+ MP E +A WG+LL A ++ D+ELGE L +LEP N+GNY +LSNIYA +W
Sbjct: 463 LKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQW 522
Query: 295 NESGKIRKVMRDMGVKKMPGCSYI 318
+ +R MR+ G++K+PGCS+I
Sbjct: 523 LDVSLLRNKMRERGIRKIPGCSWI 546
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 10/231 (4%)
Query: 21 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 80
+ + + ++F ++ + + W T I GY++ + ++LF RM+ + PD+ +
Sbjct: 69 SLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPS 128
Query: 81 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 140
+ AC+++ V+ G H + G+ V + +LID+Y K G+I A +VF+ M ++
Sbjct: 129 LIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERN 188
Query: 141 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 200
V++WT MIAG A EA +F M + N +++ AI+S G + R+ F+
Sbjct: 189 VVSWTAMIAGYASFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFD 244
Query: 201 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
M R + + MID ++G + A + P E + W +L+
Sbjct: 245 EMPHR-----NVVSFTTMIDGYAKSGDMASARFVFEEAP-ERDVVAWSALI 289
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 27/229 (11%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+++ Y K G++ AR +F+ M E+NV+SWT +IAGYA EA LF M +N
Sbjct: 162 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 221
Query: 73 PDEIAMLAALSACAQLGAVE--LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
A+++ C L + E H + + +ID YAKSG + A
Sbjct: 222 SWN-AIISGYVKCGDLRSARKMFDEMPHRNVVSF---------TTMIDGYAKSGDMASAR 271
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VFE + V+ W+ +I F VKP+E ++++SAC +G
Sbjct: 272 FVFEEAPERDVVAWSALI---------------FRVCAEWNVKPDEFIMVSLMSACSQMG 316
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+EL + + ++ + +ID+ + G + A KL MP
Sbjct: 317 SLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMP 365
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 209/347 (60%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V Y K G L A + + EK +SW ++I+G++ Q A F +M +
Sbjct: 480 SALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGII 539
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD L CA + +ELG+ IH I + L++ V + + L+DMY+K G + + +
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
FE + +TW+ MI A HGLG +A+++F M+ VKPN FI++L AC H+G V
Sbjct: 600 FEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYV 659
Query: 193 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+ G YF M S YG++P++E Y CM+DLLGR+G + EA KL+ MPFEA+ IW +LL+
Sbjct: 660 DKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLS 719
Query: 253 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 312
+ G+VE+ E A L++L+P +S Y +L+N+YAI+G W E K+R +M++ +KK
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKE 779
Query: 313 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 359
PGCS+IEV VH F+ GD +HP + +Y+ + +MK+A ++ +
Sbjct: 780 PGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPD 826
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 141/272 (51%), Gaps = 12/272 (4%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
NT++ Y K G L A +FE M ++ +SW +IA + Q ++ + ++LF M ++
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
PD+ + + ACA A+ G IH I + G+ + +AL+DMY K G + +A ++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
++ K+ ++W ++I+G + A FS+M + P+ T+ +L C ++ +
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI 558
Query: 193 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
ELG++ + I+K + + + ++D+ + G +Q++ + + P + + W +++
Sbjct: 559 ELGKQIHAQILKLQ--LHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMI 615
Query: 252 AASNIYGDVELGECALQ-----HLIKLEPHNS 278
A +G LGE A+ L+ ++P+++
Sbjct: 616 CAYAYHG---LGEKAINLFEEMQLLNVKPNHT 644
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WNT++ GYA +G++ A++LF+ M E++V+SW +L++ Y ++I +F RM+ +
Sbjct: 75 WNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKI 134
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
D L AC+ + LG +H Q G V +AL+DMY+K K+ A +
Sbjct: 135 PHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFR 194
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF M ++++ W+ +IAG + E L +F M + + ++ T+ ++ +C +
Sbjct: 195 VFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSA 254
Query: 192 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+LG + + + +KS + + I +D+ + + +A K+ +P
Sbjct: 255 FKLGTQLHGHALKSDFAYDSIIGT--ATLDMYAKCERMFDAWKVFNTLP 301
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 124/236 (52%), Gaps = 4/236 (1%)
Query: 19 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 78
YAK + +A +F + S+ +I GYA+ DQ +A+ +F+ +Q N+ DEI++
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 79 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 138
AL+AC+ + G +H + GL + + N ++DMY K G + +A +FE M+
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 139 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR- 197
+ ++W +IA + + L +F M R+ ++P++ T+ +++ AC + G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 198 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 253
+ I+KS G++ + ++D+ G+ G L EAEK+ R+ E W S+++
Sbjct: 464 HGRIIKSGMGLDWFVG--SALVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISG 516
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 11 FWNTMVAG------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 64
F N +V G Y+K L++A +F M E+N++ W+ +IAGY Q D+ E + LF+
Sbjct: 169 FENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFK 228
Query: 65 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 124
M + + + +CA L A +LG +H + + + A +DMYAK
Sbjct: 229 DMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCE 288
Query: 125 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 184
++ A +VF + N ++ +I G A G +ALD+F ++R + +EI+ L+
Sbjct: 289 RMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALT 348
Query: 185 ACC----HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 240
AC H+ ++L + + + G+ I ++D+ G+ G L EA + M
Sbjct: 349 ACSVIKRHLEGIQL-----HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME- 402
Query: 241 EANAAIWGSLLAA 253
+A W +++AA
Sbjct: 403 RRDAVSWNAIIAA 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 82 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 141
L C+ L A+ G+ +H + G + + N L+ Y KS K+ A +VF+ M + V
Sbjct: 13 LQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDV 72
Query: 142 ITWTTMIAGLA------------------------------LH-GLGREALDMFSRMERA 170
I+W T+I G A LH G+ R+++++F RM
Sbjct: 73 ISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSL 132
Query: 171 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 230
++ + TF IL AC + LG + + + + G E + ++D+ + L +
Sbjct: 133 KIPHDYATFAVILKACSGIEDYGLGLQ-VHCLAIQMGFENDVVTGSALVDMYSKCKKLDD 191
Query: 231 AEKLLRRMPFEANAAIWGSLLAA 253
A ++ R MP E N W +++A
Sbjct: 192 AFRVFREMP-ERNLVCWSAVIAG 213
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 33/149 (22%)
Query: 9 YKFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 68
Y W+ M+ YA G + EK AI LF MQ+
Sbjct: 608 YVTWSAMICAYAYHG-----------LGEK--------------------AINLFEEMQL 636
Query: 69 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 127
NVKP+ ++ L ACA +G V+ G + + YGL+ + + ++D+ +SG++
Sbjct: 637 LNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVN 696
Query: 128 KALQVFENMK-NKSVITWTTMIAGLALHG 155
+AL++ E+M + W T+++ + G
Sbjct: 697 EALKLIESMPFEADDVIWRTLLSNCKMQG 725
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 216/340 (63%), Gaps = 1/340 (0%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 71
N ++ YAK G + A +F M K++ISW T+I GY++ NEA++LF + E
Sbjct: 285 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 344
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
PDE + L ACA L A + G IH YI + G + + N+L+DMYAK G + A
Sbjct: 345 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 404
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F+++ +K +++WT MIAG +HG G+EA+ +F++M +A ++ +EI+F+++L AC H GL
Sbjct: 405 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 464
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R+FNIM+ IEP +E Y C++D+L R G L +A + + MP +A IWG+LL
Sbjct: 465 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
I+ DV+L E + + +LEP N+G Y +++NIYA +W + ++RK + G++K
Sbjct: 525 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 584
Query: 312 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 351
PGCS+IE+ RV+ FVAGD+S+P+ + + L K+ +M
Sbjct: 585 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 624
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 146/255 (57%), Gaps = 13/255 (5%)
Query: 10 KFWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 69
+F NT++ Y+K GDL++A+A+F M++++V+S+T++IAGYA+ EA+ LF M+ E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 70 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 129
+ PD + A L+ CA+ ++ G+ +H +I++ L + ++NAL+DMYAK G + +A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 130 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS-RMERARVKPNEITFIAILSACCH 188
VF M+ K +I+W T+I G + + EAL +F+ +E R P+E T +L AC
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 189 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA-- 245
+ + GR IM++ Y + + ++D+ + G L LL M F+ A+
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGAL-----LLAHMLFDDIASKD 413
Query: 246 --IWGSLLAASNIYG 258
W ++A ++G
Sbjct: 414 LVSWTVMIAGYGMHG 428
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 3/227 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N++VA Y K +++AR +F+ MTE++VISW ++I GY + +++F +M V ++
Sbjct: 83 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 132
D +++ + CA + LG +H+ + + N L+DMY+K G + A V
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 133 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 192
F M ++SV+++T+MIAG A GL EA+ +F ME + P+ T A+L+ C L+
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 262
Query: 193 ELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 238
+ G+R I ++ G + + ++D+ + G +QEAE + M
Sbjct: 263 DEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEM 307
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 32 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 91
F+ + + + W L+ A+ + +I LF++M V+ D + + L +V
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 92 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 151
GE +H +I + G + N+L+ Y K+ ++ A +VF+ M + VI+W ++I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 152 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKSRYGIEP 210
+GL + L +F +M + ++ + T +++ + C L+ LGR +I +K+ + E
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 211 KIEQYGCMIDLLGRAGYLQEAEKLLRRMP 239
+ ++D+ + G L A+ + R M
Sbjct: 181 RF--CNTLLDMYSKCGDLDSAKAVFREMS 207
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 204/307 (66%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
W+ +V + + G+L AR +F+ M EK+V+SWT +++GY++ + EA+ LF M +
Sbjct: 191 WSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGI 250
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
+PDE+ +++ +SAC LG VE G +H+YI + G +V L NALI+MYAK G + +A +
Sbjct: 251 RPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWR 310
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF NMK KS+ITW +MI+ A HG +A ++FS M + + P+ ITF+A+L A H GL
Sbjct: 311 VFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGL 370
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
V+ G R F IM+ YGIE IE YGC++D+LGRAG L+EA +L+ MP +N +WG+LL
Sbjct: 371 VDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALL 430
Query: 252 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 311
AA IYGDV +GE ++ L++L+P G Y +L +IY GR E+ IR+ M++ G K
Sbjct: 431 AACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMK 490
Query: 312 MPGCSYI 318
PG S++
Sbjct: 491 NPGYSWV 497
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 157/337 (46%), Gaps = 49/337 (14%)
Query: 17 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 76
A + GDL A+ LF+ M + N + T+I GYA+ P+ + LF +M+ +V PDE
Sbjct: 58 AAVSPSGDLPYAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEF 117
Query: 77 AMLAALSACAQLGAV-------ELGEWIHNYIEQYGLNTIVPLNNALIDMYA-------- 121
+ A +++ V E E IH + +YG + + + NALI++YA
Sbjct: 118 TFNFLIKARSRVHKVHNFPSTLECDE-IHGAVFKYGFCSHLFVQNALINLYAVKGSPAAA 176
Query: 122 -----------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 158
+ G++ A QVF++M K V++WT M++G + R
Sbjct: 177 WRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSR 236
Query: 159 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 218
EAL++F M A ++P+E+T ++++SAC ++G VE G + + G + +
Sbjct: 237 EALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINEN-GFGWMVSLCNAL 295
Query: 219 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELGECALQHLIKLE 274
I++ + G + A ++ M + W S+++A +G EL C L I
Sbjct: 296 INMYAKCGCVDRAWRVFNNMK-RKSLITWNSMISACANHGYAEDAFELFSCMLNSGIA-- 352
Query: 275 PHNSGNYAILSNIYAILGRWNESGKIRKVM-RDMGVK 310
P A+L Y G +E ++ ++M RD G++
Sbjct: 353 PDGITFLALLI-AYTHKGLVDEGYRLFQIMERDYGIE 388
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 213/325 (65%), Gaps = 1/325 (0%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 70
W +M+ +++VG++ AR F+ M+ KNVI+W ++ Y Q + + ++ M E +
Sbjct: 440 WTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKD 499
Query: 71 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 130
V+PD + + CA LGA +LG+ I + GL + NA+I MY+K G+I +A
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEAR 559
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
+VF+ + K +++W MI G + HG+G++A+++F + + KP+ I+++A+LS C H G
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
LV+ G+ YF++MK + I P +E + CM+DLLGRAG+L EA+ L+ MP + A +WG+L
Sbjct: 620 LVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGAL 679
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A I+G+ EL E A +H+ +L+ +SG+Y +++ IYA G+ ++S +IRK+MRD G+K
Sbjct: 680 LSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIK 739
Query: 311 KMPGCSYIEVSKRVHEFVAGDTSHP 335
K PG S++EV+ +VH F A D SHP
Sbjct: 740 KNPGYSWMEVNNKVHVFKADDVSHP 764
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 136/249 (54%), Gaps = 4/249 (1%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
N+M+ GY K +++A LF+ M E++V+SW +++ +Q + EA+ + MQ + V+
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 131
D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAK G +A
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPCIDPYVASALVELYAKCGCFKEAKG 326
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
VF ++ +++ + WT +IAG HG E++++F++M + ++ ++S CC
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
+ LGR+ ++ I+ + +I + + LQ AE + R M E + W S++
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMI 444
Query: 252 AASNIYGDV 260
A + G++
Sbjct: 445 TAHSQVGNI 453
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 50/350 (14%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 72
+ +V YAK G A+ +F + ++N ++WT LIAG+ Q E++ LF +M+ E +
Sbjct: 309 SALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMT 368
Query: 73 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------- 123
D+ A+ +S C + LG +H+ + G V ++N+LI MYAK
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESI 428
Query: 124 ----------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 161
G I KA + F+ M K+VITW M+ HG + L
Sbjct: 429 FRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGL 488
Query: 162 DMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 220
M++ M V+P+ +T++ + C +G +LG + + G+ +I
Sbjct: 489 RMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIG-RTVKVGLILDTSVANAVIT 547
Query: 221 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 280
+ + G + EA K+ + + + W +++ + +G +G+ A++ I + G
Sbjct: 548 MYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG---MGKQAIE--IFDDILKRGA 601
Query: 281 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 330
+ A+L + SG +++ G SY ++ KRVH G
Sbjct: 602 KPDYISYVAVLSGCSHSGLVQE-----------GKSYFDMMKRVHNISPG 640
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 13 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 71
N M+ GY K+G L++A LF M ++V SW TL++GY Q Q ++ F M +
Sbjct: 75 NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDS 134
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------ 125
P+ A+ +C LG L + ++++G + AL+DM+ + G
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASR 194
Query: 126 -------------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 160
+ AL++F++M + V++W M++ L+ G REA
Sbjct: 195 LFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254
Query: 161 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 219
LDM M+ V+ + T+ + L+AC + + G++ + ++++ I+P + ++
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS--ALV 312
Query: 220 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
+L + G +EA+ + + N A W L+A
Sbjct: 313 ELYAKCGCFKEAKGVFNSLHDRNNVA-WTVLIA 344
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 110 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 169
V +N +++ Y K G++ A+++F M + V +W T+++G +L+ F M R
Sbjct: 71 VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130
Query: 170 A-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 228
+ PN TF + +C +G L + +++ ++G + + ++D+ R G +
Sbjct: 131 SGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ-KFGSQDDSDVAAALVDMFVRCGTV 189
Query: 229 QEAEKLLRRM 238
A +L R+
Sbjct: 190 DLASRLFVRI 199
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 219/345 (63%), Gaps = 4/345 (1%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN M+ GYA+V ++ A LF M +NV+SW ++A Y ++ +E + +F +M E +
Sbjct: 290 WNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETM 349
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKAL 130
P+E +++ L+ACA LG ++ G+WIH+YI+ + V L+ AL+ MYAK G + A
Sbjct: 350 -PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLAR 408
Query: 131 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 190
VF+ M N+SV++W +MI G +HG +AL+MF ME+ PN+ TFI +LSAC H G
Sbjct: 409 DVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSG 468
Query: 191 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 250
++ G YF++M+ Y IEPK+E YGCM+DLLGRAG +++ E+L+R+MP E A+WG+L
Sbjct: 469 MILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGAL 528
Query: 251 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 310
L+A + + EL E + LI+LEP + G Y +LSNIYA G+W++ +RK+M++ G+
Sbjct: 529 LSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLT 588
Query: 311 KMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 354
K G S++ + + FV + H +Y IL + QMK +
Sbjct: 589 KTTGFSWVHIEEFGTQSFVEKASVHRK-SMMYSILSDMATQMKLS 632
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 12 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 71
WN+M+ GY K G++ AR LFE M E+++ SW ++IAGY A LF +M ++
Sbjct: 228 WNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDI 287
Query: 72 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 131
W N +ID YA+ + A +
Sbjct: 288 V----------------------SW-----------------NCMIDGYAQVQNMEIACE 308
Query: 132 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 191
+F M ++V++W M+A E L MF +M PNE T +++L+AC H+G
Sbjct: 309 LFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKM-MGETMPNEATLVSVLTACAHLGR 367
Query: 192 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 251
++ G+ + +K+ IEP + ++ + + G + A + +M + W S++
Sbjct: 368 LDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMS-NRSVVSWNSMI 426
Query: 252 AASNIYGDVELGECALQHLIKLE-----PHNSGNYAILS 285
++G + AL+ + +E P+++ +LS
Sbjct: 427 MGYGMHGQADK---ALEMFLDMEKRGPMPNDATFICVLS 462
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 25 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALS 83
+ +A +LFE + E + T++ Y ++ P A+ + V V P+ +
Sbjct: 108 VQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVK 167
Query: 84 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 143
C ++G++ GE IH I ++G + + N+LI MY+ G+IG A +FE ++T
Sbjct: 168 VCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVT 227
Query: 144 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 203
W +MI G +G A ++F M + ++ ++++ G + FN M
Sbjct: 228 WNSMIDGYVKNGEIGAARELFEEMPERDL----FSWNSMIAGYVGNGDMTAAEDLFNKMP 283
Query: 204 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 252
R I + CMID + ++ A +L MP+ N W +LA
Sbjct: 284 FR-----DIVSWNCMIDGYAQVQNMEIACELFNWMPYR-NVVSWNIMLA 326
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,480,226,307
Number of Sequences: 23463169
Number of extensions: 214234155
Number of successful extensions: 637076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9023
Number of HSP's successfully gapped in prelim test: 2709
Number of HSP's that attempted gapping in prelim test: 508898
Number of HSP's gapped (non-prelim): 54460
length of query: 372
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 228
effective length of database: 8,980,499,031
effective search space: 2047553779068
effective search space used: 2047553779068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)