Query 017415
Match_columns 372
No_of_seqs 295 out of 1471
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 14:02:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2t_A Acid phosphatase; all a 99.7 2.4E-18 8.4E-23 160.1 7.4 137 44-182 42-209 (231)
2 2ipb_A PHON protein, class A n 99.7 6.1E-18 2.1E-22 157.3 7.9 137 45-182 31-197 (230)
3 1qi9_A Protein (vanadium bromo 99.1 6.2E-11 2.1E-15 122.0 5.0 75 108-182 377-506 (556)
4 3bb0_A Vanadium chloroperoxida 98.4 1.6E-07 5.4E-12 97.9 6.3 24 154-177 488-511 (609)
5 1up8_A Vanadium-dependent brom 98.4 1.9E-07 6.5E-12 96.5 6.0 28 154-181 545-572 (598)
6 2lx0_A Membrane fusion protein 16.9 1.7E+02 0.0058 17.5 3.4 13 161-173 2-14 (32)
7 2hnh_A DNA polymerase III alph 16.5 76 0.0026 34.5 3.2 34 139-172 752-787 (910)
8 2hpi_A DNA polymerase III alph 13.5 1E+02 0.0036 34.6 3.3 34 139-172 809-844 (1220)
9 3f2b_A DNA-directed DNA polyme 12.0 1.3E+02 0.0045 33.2 3.5 34 139-172 853-888 (1041)
10 2k9j_B Integrin beta-3; transm 10.7 1.8E+02 0.0061 19.1 2.5 17 268-284 20-36 (43)
No 1
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=99.73 E-value=2.4e-18 Score=160.07 Aligned_cols=137 Identities=16% Similarity=-0.020 Sum_probs=93.4
Q ss_pred hhccHHHHHHHHhc-CchhHHHHHHHHHhhchhHHHHHHHHHHHHhhchHH---HHHHHHH-HHHH-HHHHHHHhhcccC
Q 017415 44 VIIGTAFILQIQKY-QHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKL---ARHMTLL-MAFC-DYLGNTIKDTVSA 117 (372)
Q Consensus 44 ~~~d~~~~~~lq~~-~~p~ld~~f~~~s~lG~~~f~i~~l~~~~w~~~~~~---~~~l~~~-~~~s-~~i~~~lK~~~~~ 117 (372)
.+.|.+++.++|+. .+|.++..+...+..|+..++.+ ...+.|..+++. ...++.. ++-+ ..+++.+|..++|
T Consensus 42 ~~~D~~~~~~i~~~~~~~~~~~a~~~~t~~~~~~~~~~-~~~l~~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r 120 (231)
T 1d2t_A 42 FLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAF-SGAFGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMR 120 (231)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHCCHHHHHHHT-HHHHTSCCSTTTCHHHHHHHHHTHHHHHTTTTHHHHHHHCC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHhhccCchhHHHHH-HHHHccccChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36899999999986 57899999999999887544432 233344333221 1122211 2212 3678999999999
Q ss_pred CCCCCCC-ccccccccccccCCCCCCCCChhhHhHH------------------------HHHHHhhhccchHHHHHHHH
Q 017415 118 PRPSCPP-VRRVTATKDEKENALEYGLPSSHTLNTV------------------------CLAGIYLGMHSLVDIIAGLA 172 (372)
Q Consensus 118 pRP~~pp-~~~i~~~~~~~~~~~~ysFPSgHa~~a~------------------------~lSRlYlG~H~p~DVi~G~l 172 (372)
|||.... ....+.. .+.....++|||||||++++ ++||+|+|+|||+||++|++
T Consensus 121 ~RP~~~~~~~~~~p~-~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~a~~v~~SRvylGvH~psDVlaG~~ 199 (231)
T 1d2t_A 121 IRPFAFYGVSTCNTT-EQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQNEILKRGYELGQSRVICGYHWQSDVDAARV 199 (231)
T ss_dssp CCHHHHHTCCCSCC---CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred CCcCccCCCCceecC-CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 9997421 0111000 00115678999999999864 46899999999999999999
Q ss_pred HHHHHHHHHH
Q 017415 173 LGLAVLAFWL 182 (372)
Q Consensus 173 iG~~~~~~~~ 182 (372)
+|..++...+
T Consensus 200 lG~~~~~~~~ 209 (231)
T 1d2t_A 200 VGSAVVATLH 209 (231)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 2
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=99.72 E-value=6.1e-18 Score=157.25 Aligned_cols=137 Identities=15% Similarity=-0.005 Sum_probs=91.8
Q ss_pred hccHHHHHHHHhcCchhHHHHHHHHHhhchhHHHHHHHHHHHHhhch---HHHHHHHHHHHH-HH-HHHHHHhhcccCCC
Q 017415 45 IIGTAFILQIQKYQHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHV---KLARHMTLLMAF-CD-YLGNTIKDTVSAPR 119 (372)
Q Consensus 45 ~~d~~~~~~lq~~~~p~ld~~f~~~s~lG~~~f~i~~l~~~~w~~~~---~~~~~l~~~~~~-s~-~i~~~lK~~~~~pR 119 (372)
..|.+++.++|+.+++.....+.....++.+.....+...+.+...+ .....++..... +. .+++.+|..++|||
T Consensus 31 ~~D~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r~R 110 (230)
T 2ipb_A 31 RYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATASAKKYYMRTR 110 (230)
T ss_dssp HHHHHHHHHHHTTTTSHHHHHHHHHHCCSHHHHHHHHHHHHTBCCSTTTCHHHHHHHHHHHHHHHTTTTHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHhcCcchHHHHHHHHhCCcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 67999999999999887777777766677654433333334333222 122223222222 23 78899999999999
Q ss_pred CCCCC-ccccccccccccCCCCCCCCChhhHhHH------------------------HHHHHhhhccchHHHHHHHHHH
Q 017415 120 PSCPP-VRRVTATKDEKENALEYGLPSSHTLNTV------------------------CLAGIYLGMHSLVDIIAGLALG 174 (372)
Q Consensus 120 P~~pp-~~~i~~~~~~~~~~~~ysFPSgHa~~a~------------------------~lSRlYlG~H~p~DVi~G~liG 174 (372)
|.... ....... .+.....++|||||||++++ ++||+|+|+|||+||++|+++|
T Consensus 111 P~~~~~~~~~~~~-~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~a~~v~~SRv~~G~H~~sDVlaG~~lG 189 (230)
T 2ipb_A 111 PFVLFNHSTCRPE-DENTLRKDGSYPSGHDAYSTLLALVLSQARPERAQELARRGWEFGQSRVICGAHWQSDVDAGRYVG 189 (230)
T ss_dssp HHHHTTCCCSCGG-GHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred cCccCCCCeeccC-cccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 97521 1111000 00013568999999999965 4689999999999999999999
Q ss_pred HHHHHHHH
Q 017415 175 LAVLAFWL 182 (372)
Q Consensus 175 ~~~~~~~~ 182 (372)
..++...+
T Consensus 190 ~~~~~~~~ 197 (230)
T 2ipb_A 190 AVEFARLQ 197 (230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99887654
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=99.07 E-value=6.2e-11 Score=122.02 Aligned_cols=75 Identities=21% Similarity=0.258 Sum_probs=53.4
Q ss_pred HHHHhhcccCCCCCCC--CccccccccccccCCCCCCCCChhhHhHH---------------------------------
Q 017415 108 GNTIKDTVSAPRPSCP--PVRRVTATKDEKENALEYGLPSSHTLNTV--------------------------------- 152 (372)
Q Consensus 108 ~~~lK~~~~~pRP~~p--p~~~i~~~~~~~~~~~~ysFPSgHa~~a~--------------------------------- 152 (372)
++++|.++.||||..+ ....+........+..++|||||||+.++
T Consensus 377 ~~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~~r~ 456 (556)
T 1qi9_A 377 AELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLI 456 (556)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEE
T ss_pred hhHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhcccccccccccccccccccccc
Confidence 3589999999999752 11111000000114578999999998632
Q ss_pred --------------------HHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 017415 153 --------------------CLAGIYLGMHSLVDIIAGLALGLAVLAFWL 182 (372)
Q Consensus 153 --------------------~lSRlYlG~H~p~DVi~G~liG~~~~~~~~ 182 (372)
++||+|+|+|||+||++|+++|..++...+
T Consensus 457 ~~~~~~l~~~~~l~~lA~lIg~SRVYlGVHYPSDVlaG~lLG~~va~~vl 506 (556)
T 1qi9_A 457 DFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTL 506 (556)
T ss_dssp ECCSSCCBHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeehhhHHHHHHHHHHHHHHeeCccCHHHHHHHHHHHHHHHHHHH
Confidence 238999999999999999999998876543
No 4
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A
Probab=98.45 E-value=1.6e-07 Score=97.91 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=21.9
Q ss_pred HHHHhhhccchHHHHHHHHHHHHH
Q 017415 154 LAGIYLGMHSLVDIIAGLALGLAV 177 (372)
Q Consensus 154 lSRlYlG~H~p~DVi~G~liG~~~ 177 (372)
+||+|+|+||++||++|..+|..+
T Consensus 488 ~SRIY~GVHypsDv~aG~~lG~~~ 511 (609)
T 3bb0_A 488 ISRIFLGVHWRFDAAAARDILIPT 511 (609)
T ss_dssp HHHHHTTSSCHHHHSCHHHHBCBC
T ss_pred hhhheeeeeCHHHHHHHHHHHHhh
Confidence 579999999999999999999765
No 5
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=98.42 E-value=1.9e-07 Score=96.48 Aligned_cols=28 Identities=25% Similarity=0.245 Sum_probs=24.8
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHH
Q 017415 154 LAGIYLGMHSLVDIIAGLALGLAVLAFW 181 (372)
Q Consensus 154 lSRlYlG~H~p~DVi~G~liG~~~~~~~ 181 (372)
+||+|+|+|||+||++|+.+|..++...
T Consensus 545 ~SRVYlGVHypSDVlAG~~LG~aVa~~v 572 (598)
T 1up8_A 545 IGRNMAGVHYFSDQFESLLLGEQVAIGI 572 (598)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhheeeeecHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999876544
No 6
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=16.87 E-value=1.7e+02 Score=17.52 Aligned_cols=13 Identities=38% Similarity=0.718 Sum_probs=10.0
Q ss_pred ccchHHHHHHHHH
Q 017415 161 MHSLVDIIAGLAL 173 (372)
Q Consensus 161 ~H~p~DVi~G~li 173 (372)
-|+.-+|++|.+-
T Consensus 2 khtiweviaglva 14 (32)
T 2lx0_A 2 KHTIWEVIAGLVA 14 (32)
T ss_dssp CSSSHHHHHHHHH
T ss_pred cchHHHHHHHHHH
Confidence 4888899999653
No 7
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=16.50 E-value=76 Score=34.50 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=26.9
Q ss_pred CCCCCCChhhHhHH--HHHHHhhhccchHHHHHHHH
Q 017415 139 LEYGLPSSHTLNTV--CLAGIYLGMHSLVDIIAGLA 172 (372)
Q Consensus 139 ~~ysFPSgHa~~a~--~lSRlYlG~H~p~DVi~G~l 172 (372)
.+||||-+||+.-+ +..--|+=+|||.--.++.+
T Consensus 752 a~YgFnkSHaaaYa~~ay~tAylK~hyP~~F~aa~l 787 (910)
T 2hnh_A 752 AGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVM 787 (910)
T ss_dssp HTTCBCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hccCCcchhHHHHHHHHHHHHHHHccChHHHHHHHh
Confidence 48999999998644 45569999999997766543
No 8
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=13.45 E-value=1e+02 Score=34.58 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=27.5
Q ss_pred CCCCCCChhhHhHH--HHHHHhhhccchHHHHHHHH
Q 017415 139 LEYGLPSSHTLNTV--CLAGIYLGMHSLVDIIAGLA 172 (372)
Q Consensus 139 ~~ysFPSgHa~~a~--~lSRlYlG~H~p~DVi~G~l 172 (372)
.+||||-+||+.-. +...-|+=+|||.--.++.+
T Consensus 809 a~YgFnKSHAaAYa~laYqtAyLK~hyP~eF~aAlL 844 (1220)
T 2hpi_A 809 ANYGFNKSHAAAYSLLSYQTAYVKAHYPVEFMAALL 844 (1220)
T ss_dssp TTSCBCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hccCCCcchHHHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence 58999999998644 55679999999998776654
No 9
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=12.00 E-value=1.3e+02 Score=33.21 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=27.3
Q ss_pred CCCCCCChhhHhHH--HHHHHhhhccchHHHHHHHH
Q 017415 139 LEYGLPSSHTLNTV--CLAGIYLGMHSLVDIIAGLA 172 (372)
Q Consensus 139 ~~ysFPSgHa~~a~--~lSRlYlG~H~p~DVi~G~l 172 (372)
.+|+||-+||+.-+ +..--|+=+|||.--.++.+
T Consensus 853 i~YgFnKSHAaAYal~ay~tAylK~hyP~eF~AAll 888 (1041)
T 3f2b_A 853 IKYMFPKAHAAAYVLMAVRIAYFKVHHPLLYYASYF 888 (1041)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred hccCCCccchhhhHHHHHHHHHHHhcCHHHHHHHHH
Confidence 37999999998744 45569999999998777654
No 10
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=10.67 E-value=1.8e+02 Score=19.09 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=12.7
Q ss_pred HHHhhHHHHHHHHHHHH
Q 017415 268 RILVGMPTILLVKFCSK 284 (372)
Q Consensus 268 R~l~Gv~~v~~~r~~~K 284 (372)
=.++|+.++++||....
T Consensus 20 ivliGl~lLliwk~~~~ 36 (43)
T 2k9j_B 20 ILLIGLAALLIWKLLIT 36 (43)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 35688889999987643
Done!