Query 017417
Match_columns 372
No_of_seqs 187 out of 3161
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:04:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3brk_X Glucose-1-phosphate ade 100.0 5.2E-45 1.8E-49 352.6 26.9 333 4-369 8-396 (420)
2 1yp2_A Glucose-1-phosphate ade 100.0 5.3E-42 1.8E-46 334.6 24.2 326 8-365 20-417 (451)
3 3st8_A Bifunctional protein GL 100.0 2.8E-39 9.7E-44 319.0 20.8 224 7-260 11-246 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.4E-37 4.8E-42 304.7 24.1 314 7-363 10-341 (468)
5 2ggo_A 401AA long hypothetical 100.0 2E-38 6.7E-43 304.8 17.6 308 9-363 1-330 (401)
6 4fce_A Bifunctional protein GL 100.0 2.3E-37 8E-42 302.4 20.5 314 7-365 7-338 (459)
7 2v0h_A Bifunctional protein GL 100.0 2.5E-36 8.5E-41 294.9 21.8 314 7-365 4-335 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 2.1E-34 7.2E-39 263.6 15.8 234 8-271 2-270 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.5E-33 5.1E-38 256.3 16.8 231 6-270 22-258 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 1.2E-32 4.2E-37 254.5 16.9 237 1-269 1-279 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 7.4E-32 2.5E-36 248.6 14.6 234 7-270 13-278 (297)
12 1fxo_A Glucose-1-phosphate thy 100.0 8.8E-31 3E-35 240.4 16.6 230 8-270 2-240 (293)
13 1lvw_A Glucose-1-phosphate thy 100.0 1.8E-30 6.1E-35 238.4 17.2 230 8-270 3-241 (295)
14 1mc3_A Glucose-1-phosphate thy 100.0 1E-30 3.5E-35 240.1 13.8 229 9-270 4-241 (296)
15 1tzf_A Glucose-1-phosphate cyt 100.0 1.8E-30 6.3E-35 234.5 14.4 224 8-271 2-250 (259)
16 2pa4_A UTP-glucose-1-phosphate 100.0 1E-30 3.4E-35 243.7 12.7 235 7-270 11-281 (323)
17 3pnn_A Conserved domain protei 100.0 1.9E-30 6.4E-35 239.6 13.2 235 7-272 4-292 (303)
18 4evw_A Nucleoside-diphosphate- 100.0 5.3E-30 1.8E-34 230.7 12.8 223 10-267 1-243 (255)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 2.1E-29 7.2E-34 233.2 15.5 246 5-267 1-280 (308)
20 3oam_A 3-deoxy-manno-octuloson 99.9 1.2E-25 4E-30 202.1 15.5 222 8-271 2-249 (252)
21 2x65_A Mannose-1-phosphate gua 99.9 4E-26 1.4E-30 213.1 10.0 231 9-265 2-270 (336)
22 2cu2_A Putative mannose-1-phos 99.9 2.8E-25 9.7E-30 207.4 10.9 234 8-265 2-265 (337)
23 1jyk_A LICC protein, CTP:phosp 99.9 1.5E-25 5E-30 201.7 8.2 219 7-269 24-250 (254)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 6E-24 2.1E-28 190.5 14.9 220 7-267 8-254 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 6.3E-23 2.1E-27 184.8 14.2 221 7-268 17-262 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 6.2E-22 2.1E-26 175.7 13.7 216 8-268 2-230 (234)
27 4fcu_A 3-deoxy-manno-octuloson 99.9 1.8E-21 6.3E-26 174.2 16.1 218 9-270 2-249 (253)
28 2xme_A CTP-inositol-1-phosphat 99.9 3.6E-22 1.2E-26 177.2 9.2 209 5-267 15-230 (232)
29 1vic_A 3-deoxy-manno-octuloson 99.9 4.5E-21 1.6E-25 173.2 16.5 223 8-270 2-252 (262)
30 1h7e_A 3-deoxy-manno-octuloson 99.8 1.1E-20 3.9E-25 168.7 14.6 217 8-271 2-239 (245)
31 1ezi_A CMP-N-acetylneuraminic 99.8 4.1E-19 1.4E-23 156.9 13.3 203 5-269 1-223 (228)
32 2icy_A Probable UTP-glucose-1- 99.8 4.4E-18 1.5E-22 163.7 19.6 181 7-197 78-310 (469)
33 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 1.7E-18 5.8E-23 153.6 12.2 215 9-268 3-232 (236)
34 2dpw_A Hypothetical protein TT 99.8 8.2E-20 2.8E-24 161.9 1.2 217 8-263 2-231 (232)
35 3f1c_A Putative 2-C-methyl-D-e 99.8 4.7E-18 1.6E-22 151.8 12.2 218 8-272 3-235 (246)
36 1vgw_A 4-diphosphocytidyl-2C-m 99.7 1.3E-17 4.5E-22 147.4 13.1 211 7-268 5-227 (231)
37 2i5k_A UTP--glucose-1-phosphat 99.7 1.7E-16 5.8E-21 153.5 21.6 180 6-196 90-322 (488)
38 2yc3_A 2-C-methyl-D-erythritol 99.7 1.2E-17 4.1E-22 147.4 11.1 214 5-269 1-224 (228)
39 2xwl_A 2-C-methyl-D-erythritol 99.7 2.6E-17 9E-22 144.6 12.6 207 8-269 2-218 (223)
40 1qwj_A Cytidine monophospho-N- 99.7 1.1E-16 3.7E-21 141.4 14.7 201 7-271 2-222 (229)
41 2waw_A MOBA relate protein; un 99.7 5.2E-17 1.8E-21 140.0 10.2 184 7-269 4-195 (199)
42 3d5n_A Q97W15_sulso; NESG, SSR 99.7 2.9E-16 9.9E-21 135.4 11.3 113 8-137 2-118 (197)
43 2wee_A MOBA-related protein; u 99.6 1.9E-16 6.4E-21 136.3 8.1 110 7-129 4-120 (197)
44 1i52_A 4-diphosphocytidyl-2-C- 99.6 6.5E-16 2.2E-20 137.0 11.3 220 1-270 1-228 (236)
45 1vpa_A 2-C-methyl-D-erythritol 99.6 3.9E-15 1.3E-19 131.7 15.5 208 7-270 12-228 (234)
46 2e8b_A Probable molybdopterin- 99.6 7.6E-16 2.6E-20 133.2 6.9 104 4-127 10-120 (201)
47 3q80_A 2-C-methyl-D-erythritol 99.6 7.7E-15 2.6E-19 129.3 12.3 211 8-269 7-229 (231)
48 2px7_A 2-C-methyl-D-erythritol 99.6 2.2E-15 7.6E-20 133.6 8.6 202 7-269 24-231 (236)
49 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.6 3.6E-15 1.2E-19 141.1 9.9 203 110-364 13-245 (374)
50 1jv1_A Glcnac1P uridyltransfer 99.6 4.9E-14 1.7E-18 136.9 16.8 181 7-196 101-343 (505)
51 3ngw_A Molybdopterin-guanine d 99.5 6.8E-14 2.3E-18 121.3 11.7 113 9-139 1-117 (208)
52 3rsb_A Adenosylcobinamide-phos 99.5 6.3E-15 2.2E-19 126.8 4.8 124 9-144 1-136 (196)
53 1e5k_A Molybdopterin-guanine d 99.4 2.8E-13 9.7E-18 116.9 10.2 104 7-129 5-116 (201)
54 1w55_A ISPD/ISPF bifunctional 99.4 2.6E-13 8.9E-18 127.4 9.4 115 8-143 3-125 (371)
55 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 5.8E-13 2E-17 118.2 10.2 121 239-362 36-180 (240)
56 2oeg_A UTP-glucose-1-phosphate 99.4 4.4E-12 1.5E-16 122.5 13.6 181 8-196 75-322 (505)
57 3c8v_A Putative acetyltransfer 99.3 5.2E-13 1.8E-17 129.1 2.6 77 288-365 284-360 (496)
58 3oc9_A UDP-N-acetylglucosamine 99.3 1.1E-10 3.8E-15 109.4 16.4 181 7-195 34-275 (405)
59 2yqc_A UDP-N-acetylglucosamine 99.2 1.4E-10 4.7E-15 112.3 15.1 183 7-196 102-352 (486)
60 1xhd_A Putative acetyltransfer 99.0 1E-09 3.4E-14 92.2 10.1 70 296-365 52-126 (173)
61 3r3r_A Ferripyochelin binding 99.0 1.2E-09 4E-14 92.9 9.5 71 296-366 55-137 (187)
62 3vbi_A ANTD, galactoside O-ace 99.0 6.5E-10 2.2E-14 96.0 7.7 51 295-345 52-106 (205)
63 4e79_A UDP-3-O-acylglucosamine 99.0 4.3E-09 1.5E-13 98.5 13.8 76 288-363 107-184 (357)
64 3ixc_A Hexapeptide transferase 99.0 1.5E-09 5E-14 92.7 9.5 70 297-366 74-149 (191)
65 3r8y_A 2,3,4,5-tetrahydropyrid 99.0 2.9E-09 9.8E-14 94.3 11.4 78 288-365 114-201 (240)
66 1v3w_A Ferripyochelin binding 99.0 2.1E-09 7E-14 90.2 9.6 70 296-365 50-124 (173)
67 3bfp_A Acetyltransferase; LEFT 99.0 4.7E-09 1.6E-13 89.8 11.8 32 331-362 144-176 (194)
68 3mc4_A WW/RSP5/WWP domain:bact 99.0 3.2E-09 1.1E-13 95.3 11.0 76 289-364 164-251 (287)
69 3bfp_A Acetyltransferase; LEFT 99.0 2.7E-09 9.2E-14 91.3 9.8 77 289-365 81-161 (194)
70 1j2z_A Acyl-[acyl-carrier-prot 99.0 4.8E-09 1.6E-13 94.4 11.9 77 289-365 7-97 (270)
71 4ea9_A Perosamine N-acetyltran 99.0 5.1E-09 1.8E-13 91.4 11.7 74 291-364 125-200 (220)
72 2pig_A Putative transferase; S 98.9 1.9E-09 6.4E-14 99.5 9.1 79 288-366 57-136 (334)
73 3mqg_A Lipopolysaccharides bio 98.9 7.3E-09 2.5E-13 88.3 12.0 38 291-328 29-66 (192)
74 3r0s_A Acyl-[acyl-carrier-prot 98.9 6.6E-09 2.3E-13 93.4 11.7 71 292-362 31-123 (266)
75 3r3r_A Ferripyochelin binding 98.9 3.9E-09 1.3E-13 89.6 9.6 78 288-365 26-118 (187)
76 3r1w_A Carbonic anhydrase; bet 98.9 3.7E-09 1.3E-13 90.0 9.0 71 296-366 59-141 (189)
77 1ssq_A SAT, serine acetyltrans 98.9 9.7E-09 3.3E-13 91.5 12.0 77 289-365 137-225 (267)
78 3ixc_A Hexapeptide transferase 98.9 5.2E-09 1.8E-13 89.2 9.9 78 288-365 44-130 (191)
79 3f1x_A Serine acetyltransferas 98.9 8.5E-09 2.9E-13 93.7 11.3 77 289-365 190-287 (310)
80 1xhd_A Putative acetyltransfer 98.9 8.7E-09 3E-13 86.4 10.3 78 288-365 23-108 (173)
81 1t3d_A SAT, serine acetyltrans 98.9 1.4E-08 4.8E-13 91.3 12.0 77 289-365 157-245 (289)
82 3fs8_A QDTC; acetyltransferase 98.9 1.4E-08 4.7E-13 91.6 12.1 38 291-328 16-53 (273)
83 3eh0_A UDP-3-O-[3-hydroxymyris 98.9 1.4E-08 4.7E-13 94.6 12.3 17 348-364 201-217 (341)
84 3hsq_A Acyl-[acyl-carrier-prot 98.9 1.4E-08 4.9E-13 90.8 11.8 73 290-362 25-118 (259)
85 3t57_A UDP-N-acetylglucosamine 98.9 1.1E-08 3.9E-13 93.7 11.4 74 289-362 13-92 (305)
86 4e79_A UDP-3-O-acylglucosamine 98.9 1.5E-08 5.1E-13 94.9 12.3 76 291-366 128-224 (357)
87 4eqy_A Acyl-[acyl-carrier-prot 98.9 1.2E-08 4.1E-13 92.5 11.3 56 290-345 29-85 (283)
88 3eg4_A 2,3,4,5-tetrahydropyrid 98.9 1.2E-08 4.1E-13 93.0 11.1 75 291-365 154-238 (304)
89 3q1x_A Serine acetyltransferas 98.9 1.5E-08 5E-13 92.4 11.6 76 290-365 164-259 (313)
90 2qia_A UDP-N-acetylglucosamine 98.9 1.7E-08 5.7E-13 90.5 11.9 68 295-362 35-123 (262)
91 3r1w_A Carbonic anhydrase; bet 98.9 9E-09 3.1E-13 87.5 9.4 78 288-365 30-122 (189)
92 4ea9_A Perosamine N-acetyltran 98.9 1.9E-08 6.5E-13 87.7 11.7 76 290-365 106-183 (220)
93 3mqg_A Lipopolysaccharides bio 98.8 1.7E-08 5.7E-13 86.1 11.1 66 289-354 9-76 (192)
94 1v3w_A Ferripyochelin binding 98.8 8.7E-09 3E-13 86.4 9.0 78 288-365 21-106 (173)
95 4e6u_A Acyl-[acyl-carrier-prot 98.8 1.7E-08 6E-13 90.6 11.6 72 291-362 33-125 (265)
96 3pmo_A UDP-3-O-[3-hydroxymyris 98.8 1.4E-08 4.8E-13 95.5 11.3 72 291-362 127-200 (372)
97 3vbi_A ANTD, galactoside O-ace 98.8 9.6E-09 3.3E-13 88.6 8.9 78 288-365 63-170 (205)
98 3kwd_A Carbon dioxide concentr 98.8 1.7E-08 5.7E-13 87.6 10.4 67 296-362 80-161 (213)
99 3gos_A 2,3,4,5-tetrahydropyrid 98.8 1.9E-08 6.4E-13 90.7 11.1 73 292-364 130-212 (276)
100 3hjj_A Maltose O-acetyltransfe 98.8 1.8E-08 6.3E-13 85.7 10.4 73 293-365 76-170 (190)
101 3tv0_A Dynactin subunit 6; LEF 98.8 2.8E-08 9.7E-13 84.8 11.4 77 289-365 24-138 (194)
102 1qre_A Carbonic anhydrase; bet 98.8 1.6E-08 5.6E-13 89.8 10.1 49 314-362 141-190 (247)
103 3tk8_A 2,3,4,5-tetrahydropyrid 98.8 2.8E-08 9.5E-13 91.0 11.3 70 295-364 174-253 (316)
104 3eh0_A UDP-3-O-[3-hydroxymyris 98.8 1.9E-08 6.7E-13 93.6 10.5 77 287-363 101-179 (341)
105 3nz2_A Hexapeptide-repeat cont 98.8 2.7E-08 9.3E-13 85.0 10.2 74 292-365 73-168 (195)
106 3kwd_A Carbon dioxide concentr 98.8 2.5E-08 8.5E-13 86.5 10.0 68 296-363 112-179 (213)
107 3pmo_A UDP-3-O-[3-hydroxymyris 98.8 4.7E-08 1.6E-12 91.9 12.6 75 291-365 139-240 (372)
108 3f1x_A Serine acetyltransferas 98.8 2.1E-08 7.2E-13 91.1 9.7 43 295-337 190-235 (310)
109 3mc4_A WW/RSP5/WWP domain:bact 98.8 2E-08 6.7E-13 90.2 9.2 48 314-361 217-265 (287)
110 3fsy_A Tetrahydrodipicolinate 98.8 2.1E-08 7.1E-13 90.0 9.2 51 314-365 208-267 (332)
111 3gos_A 2,3,4,5-tetrahydropyrid 98.8 3.7E-08 1.3E-12 88.7 10.9 29 337-365 178-207 (276)
112 3r0s_A Acyl-[acyl-carrier-prot 98.8 6.6E-08 2.2E-12 86.8 12.4 56 290-345 47-123 (266)
113 2p2o_A Maltose transacetylase; 98.8 2.9E-08 1E-12 84.0 9.4 73 293-365 72-166 (185)
114 3ftt_A Putative acetyltransfer 98.8 2.6E-08 8.8E-13 85.4 9.1 73 293-365 72-166 (199)
115 3jqy_B NEUO, polysialic acid O 98.7 2.1E-08 7.1E-13 89.3 8.7 71 295-365 105-199 (252)
116 3eg4_A 2,3,4,5-tetrahydropyrid 98.7 4.9E-08 1.7E-12 89.0 11.1 66 301-366 158-233 (304)
117 3hsq_A Acyl-[acyl-carrier-prot 98.7 8.1E-08 2.8E-12 85.9 12.3 64 288-351 41-125 (259)
118 3srt_A Maltose O-acetyltransfe 98.7 3.5E-08 1.2E-12 83.8 9.3 72 294-365 75-168 (188)
119 4eqy_A Acyl-[acyl-carrier-prot 98.7 5.7E-08 1.9E-12 88.0 11.2 57 290-346 47-116 (283)
120 4e6u_A Acyl-[acyl-carrier-prot 98.7 8.1E-08 2.8E-12 86.2 12.0 56 290-345 50-125 (265)
121 1ocx_A Maltose O-acetyltransfe 98.7 5.2E-08 1.8E-12 82.2 10.0 73 293-365 70-164 (182)
122 3tv0_A Dynactin subunit 6; LEF 98.7 5.4E-08 1.9E-12 83.1 10.2 56 291-346 8-67 (194)
123 3tk8_A 2,3,4,5-tetrahydropyrid 98.7 7.6E-08 2.6E-12 88.0 11.8 66 301-366 174-249 (316)
124 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.7 5.8E-08 2E-12 91.6 11.3 76 288-363 129-206 (374)
125 1qre_A Carbonic anhydrase; bet 98.7 5.1E-08 1.7E-12 86.6 10.2 72 291-362 73-173 (247)
126 2ggo_A 401AA long hypothetical 98.7 3.2E-08 1.1E-12 94.3 9.3 75 288-362 237-312 (401)
127 3jqy_B NEUO, polysialic acid O 98.7 2.8E-08 9.4E-13 88.6 8.1 73 294-366 84-182 (252)
128 3r5d_A Tetrahydrodipicolinate 98.7 5.9E-08 2E-12 87.7 9.9 70 295-365 208-290 (347)
129 4hur_A Virginiamycin A acetylt 98.7 9.7E-08 3.3E-12 83.2 10.8 64 302-365 55-155 (220)
130 2qia_A UDP-N-acetylglucosamine 98.7 1.3E-07 4.3E-12 84.8 11.7 53 293-345 15-68 (262)
131 1j2z_A Acyl-[acyl-carrier-prot 98.7 1.1E-07 3.6E-12 85.6 11.2 38 291-328 27-64 (270)
132 3t57_A UDP-N-acetylglucosamine 98.7 1.2E-07 4.2E-12 86.8 11.8 77 289-365 31-126 (305)
133 1ssq_A SAT, serine acetyltrans 98.7 7.4E-08 2.5E-12 85.8 9.7 26 108-133 20-47 (267)
134 3q1x_A Serine acetyltransferas 98.6 8.8E-08 3E-12 87.2 9.6 42 294-335 162-206 (313)
135 3c8v_A Putative acetyltransfer 98.6 4.6E-08 1.6E-12 94.6 7.8 69 294-363 307-380 (496)
136 1t3d_A SAT, serine acetyltrans 98.6 1.2E-07 4.1E-12 85.2 9.7 26 108-133 40-67 (289)
137 3eev_A Chloramphenicol acetylt 98.6 1.6E-07 5.4E-12 81.3 10.2 35 330-364 111-146 (212)
138 3fs8_A QDTC; acetyltransferase 98.6 1.5E-07 5.2E-12 84.7 10.4 68 296-363 71-140 (273)
139 1krr_A Galactoside O-acetyltra 98.6 1.6E-07 5.4E-12 80.5 9.9 73 293-365 73-167 (203)
140 3r5d_A Tetrahydrodipicolinate 98.6 7.8E-08 2.7E-12 87.0 8.2 73 290-362 185-271 (347)
141 4fce_A Bifunctional protein GL 98.6 6.3E-08 2.2E-12 93.8 7.9 74 288-362 279-353 (459)
142 3brk_X Glucose-1-phosphate ade 98.6 5.1E-08 1.7E-12 93.5 7.2 73 290-364 297-374 (420)
143 1hm9_A GLMU, UDP-N-acetylgluco 98.6 9.4E-08 3.2E-12 92.9 9.1 73 288-362 285-358 (468)
144 2v0h_A Bifunctional protein GL 98.6 6.2E-08 2.1E-12 93.8 7.6 75 288-363 276-351 (456)
145 3fsy_A Tetrahydrodipicolinate 98.5 2.4E-07 8.1E-12 83.2 9.2 74 289-362 161-248 (332)
146 3st8_A Bifunctional protein GL 98.5 2.1E-07 7.2E-12 91.2 9.1 51 313-363 386-445 (501)
147 2pig_A Putative transferase; S 98.5 2E-07 6.9E-12 85.9 8.3 57 288-345 76-132 (334)
148 3ftt_A Putative acetyltransfer 98.5 3.5E-07 1.2E-11 78.3 9.1 13 291-303 76-88 (199)
149 2wlg_A Polysialic acid O-acety 98.5 3.6E-07 1.2E-11 79.2 9.1 69 296-364 80-172 (215)
150 2rij_A Putative 2,3,4,5-tetrah 98.5 5E-07 1.7E-11 84.0 9.6 55 310-365 261-324 (387)
151 3r3i_A UTP--glucose-1-phosphat 98.4 4.3E-06 1.5E-10 80.5 15.1 182 6-196 125-364 (528)
152 2wlg_A Polysialic acid O-acety 98.4 5.3E-07 1.8E-11 78.2 8.1 70 296-365 59-155 (215)
153 3srt_A Maltose O-acetyltransfe 98.4 9.5E-07 3.3E-11 74.9 9.3 36 313-348 132-168 (188)
154 1ocx_A Maltose O-acetyltransfe 98.4 6.2E-07 2.1E-11 75.6 7.8 66 295-367 92-176 (182)
155 4e8l_A Virginiamycin A acetylt 98.4 1.7E-06 5.7E-11 75.0 10.2 35 330-364 118-153 (219)
156 2rij_A Putative 2,3,4,5-tetrah 98.3 2.3E-07 7.8E-12 86.3 3.6 72 289-361 217-304 (387)
157 2p2o_A Maltose transacetylase; 98.3 1.4E-06 4.8E-11 73.6 6.8 54 294-347 93-165 (185)
158 1yp2_A Glucose-1-phosphate ade 98.2 4E-06 1.4E-10 81.0 9.8 53 295-347 346-416 (451)
159 1mr7_A Streptogramin A acetylt 98.2 5.3E-06 1.8E-10 71.4 9.0 35 330-364 113-148 (209)
160 1krr_A Galactoside O-acetyltra 98.2 4.6E-06 1.6E-10 71.3 8.4 69 298-366 72-162 (203)
161 4hur_A Virginiamycin A acetylt 98.2 2.8E-06 9.6E-11 73.8 6.5 36 312-347 118-154 (220)
162 3gue_A UTP-glucose-1-phosphate 98.1 0.00012 4.3E-09 69.8 17.6 132 7-144 75-249 (484)
163 1xat_A Xenobiotic acetyltransf 98.1 1.6E-05 5.4E-10 68.5 10.3 35 330-364 110-145 (212)
164 3eev_A Chloramphenicol acetylt 98.0 2.7E-05 9.3E-10 67.1 9.6 48 313-367 111-159 (212)
165 1mr7_A Streptogramin A acetylt 97.7 8.8E-05 3E-09 63.7 7.6 29 337-365 114-143 (209)
166 1xat_A Xenobiotic acetyltransf 97.6 0.00018 6.3E-09 61.8 8.3 35 313-347 110-145 (212)
167 3ogz_A UDP-sugar pyrophosphory 97.5 0.0018 6.2E-08 63.5 14.0 131 8-144 114-301 (630)
168 4e8l_A Virginiamycin A acetylt 97.4 0.00054 1.8E-08 59.1 8.4 34 313-346 118-152 (219)
169 2i5e_A Hypothetical protein MM 97.1 0.00036 1.2E-08 59.9 4.5 100 7-128 2-111 (211)
170 1qg8_A Protein (spore coat pol 92.1 1.1 3.6E-05 38.5 10.4 75 54-133 33-116 (255)
171 3bcv_A Putative glycosyltransf 88.9 1.3 4.5E-05 37.5 8.0 57 80-140 62-119 (240)
172 1xhb_A Polypeptide N-acetylgal 87.2 2.7 9.3E-05 40.0 9.7 56 79-137 90-146 (472)
173 3cgx_A Putative nucleotide-dip 81.2 3.2 0.00011 35.9 6.5 83 42-132 38-130 (242)
174 2d7i_A Polypeptide N-acetylgal 78.8 7.4 0.00025 38.1 9.1 54 79-135 172-226 (570)
175 2z86_A Chondroitin synthase; G 73.3 16 0.00053 36.0 9.9 98 36-138 99-207 (625)
176 3ckj_A Putative uncharacterize 70.1 7.1 0.00024 35.1 6.1 53 86-141 114-169 (329)
177 2z86_A Chondroitin synthase; G 66.0 21 0.00073 35.0 9.1 89 42-135 388-484 (625)
178 2ffu_A Ppgalnact-2, polypeptid 65.5 29 0.001 33.0 9.7 55 79-136 122-177 (501)
179 4fix_A UDP-galactofuranosyl tr 64.5 26 0.00087 35.0 9.2 61 79-140 241-303 (657)
180 2nxv_A ATP synthase subunits r 56.8 55 0.0019 27.6 9.1 71 59-132 24-101 (249)
181 3l7i_A Teichoic acid biosynthe 50.7 3.3 0.00011 42.0 0.0 51 78-131 58-109 (729)
182 4hg6_A Cellulose synthase subu 48.0 50 0.0017 33.7 8.4 43 89-134 224-267 (802)
183 2c0n_A A197; thermophil protei 46.6 33 0.0011 28.4 5.4 83 100-196 47-133 (203)
184 3f1y_A Mannosyl-3-phosphoglyce 41.2 13 0.00046 34.3 2.6 100 88-194 164-273 (387)
185 3kcq_A Phosphoribosylglycinami 29.0 1.4E+02 0.0046 24.9 6.7 22 3-26 3-24 (215)
186 3sho_A Transcriptional regulat 23.4 2.7E+02 0.0092 21.8 7.8 90 44-141 29-121 (187)
187 1fo8_A Alpha-1,3-mannosyl-glyc 22.9 3.1E+02 0.01 24.6 8.3 36 93-128 85-121 (343)
188 2bo4_A Mannosylglycerate synth 21.5 2.2E+02 0.0076 26.1 7.2 53 88-141 73-128 (397)
No 1
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.2e-45 Score=352.58 Aligned_cols=333 Identities=19% Similarity=0.284 Sum_probs=254.8
Q ss_pred CCCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCc-chhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCC
Q 017417 4 SEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQ-PMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELR 77 (372)
Q Consensus 4 ~~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~-pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~ 77 (372)
.|+++|.||||||| .|+||+|+|..+||+|+|++|+ |||+|+++++.. |+|++.+..+++.+++... |+
T Consensus 8 ~mm~~~~avILAaG--~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~---~~ 82 (420)
T 3brk_X 8 PLARDAMAYVLAGG--RGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRG---WD 82 (420)
T ss_dssp CGGGGEEEEEEECC--CCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH---SC
T ss_pred hhhhceEEEEEcCC--CCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhh---hc
Confidence 35567899999999 9999999999999999999999 999999998765 7777766667788888652 22
Q ss_pred e-------eEEEecCC----cc---cChHHHHHHHHHHhhccCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEe
Q 017417 78 I-------PVRYLRED----KP---HGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIK 143 (372)
Q Consensus 78 ~-------~i~~~~~~----~~---~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~l~~~l~~~~~~~~~~~i~~~~ 143 (372)
. .+.++... .. .|++++++.+++++.....+++++++||++++.++.++++.|++.++++++++.+
T Consensus 83 ~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~ 162 (420)
T 3brk_X 83 FFRPERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLE 162 (420)
T ss_dssp CCCGGGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEE
T ss_pred cccccccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEee
Confidence 1 23333211 12 7999999999998864323679999999988889999999999888889998887
Q ss_pred cCCcccccceEEEEcCCCCceeEeeecCCCcc-------cCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhh
Q 017417 144 VSAESASQFGELVADPDTNELLHYTEKPETFV-------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEA 215 (372)
Q Consensus 144 ~~~~~~~~~~~v~~~~~~~~v~~i~ek~~~~~-------~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 215 (372)
.+.+++..|+.+..++ +++|..|.|||..+. ..+.++|+|+|++++| +.+.+......+
T Consensus 163 ~~~~~~~~~g~v~~d~-~g~v~~~~ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~------------ 229 (420)
T 3brk_X 163 VPRMEATGFGVMHVNE-KDEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADPTS------------ 229 (420)
T ss_dssp EETTGGGGSEEEEECT-TSBEEEEEESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC---------------
T ss_pred cCccccCcccEEEECC-CCcEEEeEeCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccCCc------------
Confidence 6545677899998885 689999999986443 6789999999999887 445443211000
Q ss_pred hhhcccccccccccccccccccCCCCceEEEeec-----------chhhhhcCCccccccchHHHHhhccccCCccccC-
Q 017417 216 LQSATRNLTTDFVRLDQDILSPLAGKKQLYTYET-----------MDFWEQIKTPGMSLKCSGLYLAQFRLTSPNLLAS- 283 (372)
Q Consensus 216 ~~~~~~~~~~~~~~~~~d~l~~~~~~~~v~~~~~-----------~~~w~~i~t~~d~~~a~~~~~~~~~~~~~~~~~~- 283 (372)
..+| ..|+++.+++++++++|.+ +++|.+++||+||.+|+..++...... .++..
T Consensus 230 --------~~~~---~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~--~~~~~~ 296 (420)
T 3brk_X 230 --------SRDF---GKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDL--DIYDKS 296 (420)
T ss_dssp ------------------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSS--CTTCCS
T ss_pred --------cccc---hHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchh--hcCCCC
Confidence 1112 2577777766669999999 899999999999999988776543211 11111
Q ss_pred -----CC-CCCCcEEcC----------CcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEc
Q 017417 284 -----GD-GTKNATIIG----------DVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTN 347 (372)
Q Consensus 284 -----~~-~~~~~~~~~----------~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~ 347 (372)
.. ..+.+.+.. ++.||+++.| +++.|. +|+||++|+||++|.|.+|+|+++|.|+++|+|.+
T Consensus 297 ~~i~~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~-~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~ 374 (420)
T 3brk_X 297 WPIWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALN-RSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSN 374 (420)
T ss_dssp SCCCCCCCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEE-SCEECTTCEECTTCEEEEEEECTTCEECTTCEEEE
T ss_pred CceeeccccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEe-CcEEcCCCEECCCCEEcceEEcCCCEECCCCEEec
Confidence 00 112333433 7788888888 777885 79999999999999999999999999999999999
Q ss_pred eEECCCCEECCCcEEcCCCCcC
Q 017417 348 AIVGWKSSIGRWSRVQASSKYN 369 (372)
Q Consensus 348 ~~i~~~~~i~~~~~i~~~~~~~ 369 (372)
|+||+++.||+++.|.+....|
T Consensus 375 ~~ig~~~~i~~~~~i~~~~~~~ 396 (420)
T 3brk_X 375 VVIDHGVVIPEGLIVGEDPELD 396 (420)
T ss_dssp EEECTTCEECTTCEESSCHHHH
T ss_pred eEECCCCEECCCCEEeCCCCCC
Confidence 9999999999999999776554
No 2
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=5.3e-42 Score=334.55 Aligned_cols=326 Identities=19% Similarity=0.331 Sum_probs=238.0
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCc-chhhhhHhhcce-----EEEEcccchHHHHHHHhhcc-CCCC---
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQ-PMVHHPISACKR-----IYLVGFYEEREFALYVSSIS-NELR--- 77 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~-pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~-~~~~--- 77 (372)
+|++|||||| +|+||+|+|..+||+|+|++|+ |||+|++++|.. |+|++.+..+++.+++.... ..+.
T Consensus 20 ~~~avILAaG--~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~ 97 (451)
T 1yp2_A 20 SVLGIILGGG--AGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 97 (451)
T ss_dssp HEEEEEC--------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC-------
T ss_pred ceEEEEECCC--CCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhhhccccccc
Confidence 5899999999 9999999999999999999999 999999998765 77777666667878876421 0111
Q ss_pred ----eeEEEecC-----CcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEecCCcc
Q 017417 78 ----IPVRYLRE-----DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIKVSAES 148 (372)
Q Consensus 78 ----~~i~~~~~-----~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~ 148 (372)
+++....+ +...|++++++.+++++.....+++++++||++++.++.++++.|++.++++++++.+...++
T Consensus 98 ~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~ 177 (451)
T 1yp2_A 98 NEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKR 177 (451)
T ss_dssp -CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHH
T ss_pred ccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhh
Confidence 22322211 124799999999999986422368999999998888999999999988888999888875445
Q ss_pred cccceEEEEcCCCCceeEeeecCCCc---------------------ccCceeeeEEEeCHhhHH-Hhhhcccccchhhh
Q 017417 149 ASQFGELVADPDTNELLHYTEKPETF---------------------VSDLINCGVYVFTPDIFN-AIQGVSSQRKDREN 206 (372)
Q Consensus 149 ~~~~~~v~~~~~~~~v~~i~ek~~~~---------------------~~~~~~~Giy~~~~~~~~-~l~~~~~~~~~~~~ 206 (372)
+..||.+.+++ +++|..|.|||... ...++++|+|+|++++|. .+.+..+.
T Consensus 178 ~~~~g~v~~d~-~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~------ 250 (451)
T 1yp2_A 178 ATAFGLMKIDE-EGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG------ 250 (451)
T ss_dssp HTTSEEEEECT-TSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT------
T ss_pred cccCCEEEECC-CCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc------
Confidence 67899999985 68999999998632 246889999999999874 45443111
Q ss_pred hhccchhhhhhhcccccccccccccccccccCCCC-ceEEEeecchhhhhcCCccccccchHHHHhhccccCCccccC--
Q 017417 207 LRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSGLYLAQFRLTSPNLLAS-- 283 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~-~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~~~~~~~~~~~~~-- 283 (372)
..+| ..++|+.++++ .++++|..+++|.++++|++|.+++..++..... ...+..+
T Consensus 251 -----------------~~~~---~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~-~~~~~~~~~ 309 (451)
T 1yp2_A 251 -----------------ANDF---GSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVP-DFSFYDRSA 309 (451)
T ss_dssp -----------------CCCT---TTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSC-SSCSCCSSS
T ss_pred -----------------ccch---HhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhccccc-chhccCCCC
Confidence 1122 14666655544 7899999999999999999999998877644310 0011111
Q ss_pred ----CCC-CCCcEEc----CCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCC------------------
Q 017417 284 ----GDG-TKNATII----GDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDG------------------ 336 (372)
Q Consensus 284 ----~~~-~~~~~~~----~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~------------------ 336 (372)
... .+...+. .++.|++++.|++ +.+. +++||++|.||++|+|.++++..+
T Consensus 310 ~i~~~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~-~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~ 387 (451)
T 1yp2_A 310 PIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSV 387 (451)
T ss_dssp CCCCCCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEE-SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCC
T ss_pred eeccCCccCCCeEEcceEEeCeEECCCCEEcc-eEEe-ccEECCCCEECCCCEEcCceEECCCCcccccccccccccCce
Confidence 111 1222220 2456666666664 5565 899999999999999999888777
Q ss_pred -CEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 337 -VEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 337 -~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
+.||++|.|.+++|+++|.||+++.|.++
T Consensus 388 ~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~ 417 (451)
T 1yp2_A 388 PIGIGKNCHIKRAIIDKNARIGDNVKIINK 417 (451)
T ss_dssp CSEECTTCEEESEEECTTCEECTTCEECCS
T ss_pred eEEECCCCEEeccEeCCCcEECCCCEEeCC
Confidence 99999999999999999999999999875
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=2.8e-39 Score=318.98 Aligned_cols=224 Identities=18% Similarity=0.287 Sum_probs=177.6
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
..+.+|||||| .||||+|+| ||||+||+|||||+|+|+.+.+ |+|+..+..+++.+|+++..+.++..+.
T Consensus 11 ~~~~vvILAaG--~GtRm~~~~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 85 (501)
T 3st8_A 11 GDTAVLVLAAG--PGTRMRSDT---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTID 85 (501)
T ss_dssp -CEEEEEEECS--CCGGGCCSS---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTSCCE
T ss_pred CCceEEEECCc--CcccCCCCC---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCcEE
Confidence 56899999999 999999954 9999999999999999999877 7777677778899999876566778889
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
|+.|++++||++|++++++++.++..+.+++++||.++ ...+.++++.|++.++++++++.++ ++|..||.+..+.
T Consensus 86 ~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~--~dp~~yG~i~~~~ 163 (501)
T 3st8_A 86 VALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTL--DDPFGYGRILRTQ 163 (501)
T ss_dssp EEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEECT
T ss_pred EEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeecc--CCchhcccccccc
Confidence 99999999999999999999977656789999999976 3458999999999999999999987 5799999999986
Q ss_pred CCCceeEeeecCCC----cccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhccccccccccccccccc
Q 017417 160 DTNELLHYTEKPET----FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDIL 235 (372)
Q Consensus 160 ~~~~v~~i~ek~~~----~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l 235 (372)
+++|..+.||++. ...+++++|+|+|+++.|..+.+...... ...+|+. .|++
T Consensus 164 -~g~v~~ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n--------------------~~~e~yl--td~i 220 (501)
T 3st8_A 164 -DHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNN--------------------AQQELYL--TDVI 220 (501)
T ss_dssp -TCCEEEEECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCS--------------------TTCSCCT--THHH
T ss_pred -ceeEEeeccccCCChhhccceeeeceeeeecchhHHHhhhhhcccc--------------------cccccch--hhHH
Confidence 7999999998643 34678999999999888876644322211 1223332 5555
Q ss_pred ccCC-CCceEEEeecchhhhhcCCcc
Q 017417 236 SPLA-GKKQLYTYETMDFWEQIKTPG 260 (372)
Q Consensus 236 ~~~~-~~~~v~~~~~~~~w~~i~t~~ 260 (372)
..+. ....+..+..+..|...+...
T Consensus 221 ~~~~~~g~~v~~~~~~~~~~~~g~n~ 246 (501)
T 3st8_A 221 AILRSDGQTVHASHVDDSALVAGVNN 246 (501)
T ss_dssp HHHHHTTCCEEEEECSSGGGGCCCSS
T ss_pred HHHHhcCceEEEEeccchhhhccccc
Confidence 5433 345677777777776655443
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=1.4e-37 Score=304.74 Aligned_cols=314 Identities=18% Similarity=0.316 Sum_probs=215.7
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
..-++|||||| .|+||++ .+||+|+|++|+|||+|++++|.. |+|++.+..+++.+++.. .+.
T Consensus 10 ~~~~~vIlAaG--~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~-------~i~ 77 (468)
T 1hm9_A 10 HSNFAIILAAG--KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG-------QTE 77 (468)
T ss_dssp -CEEEEEECCC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS-------SSE
T ss_pred cCCcEEEEcCC--CCccCCC---CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC-------CcE
Confidence 45689999999 9999986 789999999999999999999865 777766666666665543 234
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
++.+....|++++++.+++++... .+++++++||+++ +.+++++++.|++.++++++++.+. .++..|+.+..++
T Consensus 78 ~v~~~~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~--~~~~~~g~v~~d~ 154 (468)
T 1hm9_A 78 FVTQSEQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET--DNPFGYGRIVRND 154 (468)
T ss_dssp EEECSSCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEECT
T ss_pred EEeCCccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc--CCCCceeEEEECC
Confidence 555666789999999999998631 3689999999965 5679999999988888888888776 4567799888885
Q ss_pred CCCceeEeeecCC----CcccCceeeeEEEeCHh-hHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 160 DTNELLHYTEKPE----TFVSDLINCGVYVFTPD-IFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 160 ~~~~v~~i~ek~~----~~~~~~~~~Giy~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
+++|..+.||+. .....+.++|+|+|+++ +++.+.+....+. ..+++ .+|+
T Consensus 155 -~g~v~~~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~---------------------~~~~~--~~d~ 210 (468)
T 1hm9_A 155 -NAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNA---------------------QGEYY--ITDV 210 (468)
T ss_dssp -TCCEEEEECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCST---------------------TCSCC--TTHH
T ss_pred -CCCEEEEEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhccccC---------------------CCeEE--HHHH
Confidence 689999999864 23467899999999988 5566655322110 11222 1577
Q ss_pred cccCCCC-ceEEEeecchhhhhcC--CccccccchHHHHhhccccCCccccCCCC---CCCcEEcCCcEECCCCEECCCC
Q 017417 235 LSPLAGK-KQLYTYETMDFWEQIK--TPGMSLKCSGLYLAQFRLTSPNLLASGDG---TKNATIIGDVYVHPSAKIHPTA 308 (372)
Q Consensus 235 l~~~~~~-~~v~~~~~~~~w~~i~--t~~d~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~i~~~~ 308 (372)
++.+.+. .++++|.++++|.+++ +|+||.+++..+...... .++..+.. .....+.+++.|++++.|.+++
T Consensus 211 ~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~ 287 (468)
T 1hm9_A 211 IGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINH---KHMVNGVSFVNPEATYIDIDVEIAPEVQIEANV 287 (468)
T ss_dssp HHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHH---HHHHTTCEESCGGGCEECTTCEECTTCEECSSC
T ss_pred HHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHH---HHHhcCCEEECCCeeEECCCcEECCCCEECCCc
Confidence 7766654 5899999999998854 999999998776543210 00000000 0122344555555555555555
Q ss_pred EECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEc
Q 017417 309 KIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 309 ~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~ 363 (372)
.|.+++.||++|.|++++.|.+|.|+++|.|+ +|.|.+++|++++.|++++.|.
T Consensus 288 ~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~ 341 (468)
T 1hm9_A 288 ILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIR 341 (468)
T ss_dssp EEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSCEEC
T ss_pred EECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCceEEe
Confidence 55555555555555555555555555555555 5555555555555555555554
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=2e-38 Score=304.81 Aligned_cols=308 Identities=21% Similarity=0.375 Sum_probs=231.9
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEEEe
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~ 83 (372)
|++|||||| .|+||+|+|..+||+|+|++|+|||+|++++|.. |+|++.+. +.+++..... .+.++
T Consensus 1 m~aiIlA~G--~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~----~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAG--SGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK----EISIV 71 (401)
T ss_dssp CEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT----TCEEE
T ss_pred CeEEEEcCc--CccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC----cEEEE
Confidence 679999999 9999999999999999999999999999998865 66666544 5566654321 23445
Q ss_pred cCCc-ccChHHHHHHHHHHhhccCCCeEEEEcCCeeec--CChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCC
Q 017417 84 REDK-PHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS--FPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (372)
Q Consensus 84 ~~~~-~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~--~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~ 160 (372)
.++. +.|++++++.+.+ . ++++++.||+++. .+++++++ ..+.++++.+. .++..|+.+..+.
T Consensus 72 ~~~~~~~g~~~~l~~~~~----~--~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~--~~~~~~~~v~~~~- 137 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF----N--DEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV--SNPKDYGVLVLDN- 137 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC----S--SEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC--SCCSSSCEEEECT-
T ss_pred eCCCCCCChHHHHHHhcc----C--CCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc--CCCcceeEEEECC-
Confidence 4554 6788888887654 1 5799999999985 45777665 35677777776 3456788888875
Q ss_pred CCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCC
Q 017417 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (372)
Q Consensus 161 ~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~ 240 (372)
++++..+.|||..+.+.+.++|+|++++++|+.+.+..+.. ..++.. .++++.+..
T Consensus 138 ~g~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~----------------------~~~~~~--~~~~~~~~~ 193 (401)
T 2ggo_A 138 QNNLSKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISE----------------------RGELEL--TDAINLMAK 193 (401)
T ss_dssp TSSEEEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCCS----------------------SSCBCH--HHHHHHHHH
T ss_pred CCeEEEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcCC----------------------CCceEH--HHHHHHHHC
Confidence 58999999998777788999999999999998876542110 111111 355555522
Q ss_pred CceEEEeecchhhhhcCCccccccchHHHHhhccc--c----CCcc-c------cCCCC-CCCcEEcCCcEECCCCEECC
Q 017417 241 KKQLYTYETMDFWEQIKTPGMSLKCSGLYLAQFRL--T----SPNL-L------ASGDG-TKNATIIGDVYVHPSAKIHP 306 (372)
Q Consensus 241 ~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~~~~~--~----~~~~-~------~~~~~-~~~~~~~~~~~i~~~~~i~~ 306 (372)
..+++.+..+++|.+++||+||.+++..++..... . .+.. . ..+.. .+.+.+.+++.||+++.|++
T Consensus 194 g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~ 273 (401)
T 2ggo_A 194 DHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGP 273 (401)
T ss_dssp HSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECS
T ss_pred CCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECC
Confidence 25788999899999999999999999887765321 0 0100 0 01111 14455666778888888888
Q ss_pred CCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEc
Q 017417 307 TAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 307 ~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~ 363 (372)
+++|.++++||++|.|++++.|.+|+|++++.|++++.|.+++||+++.||+++.|.
T Consensus 274 ~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 274 NSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIA 330 (401)
T ss_dssp SCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEEC
T ss_pred CCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEc
Confidence 888888899999999999999999999999999999999999999999999999986
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=2.3e-37 Score=302.42 Aligned_cols=314 Identities=22% Similarity=0.324 Sum_probs=230.8
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
++|.||||||| .|+||++ ++||+|+|++|+|||+|+++.|.. |+|++.+..+++.+++... .+.
T Consensus 7 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~------~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAG--KGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP------SLN 75 (459)
T ss_dssp CCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-----------C
T ss_pred CcceEEEECCC--CCccCCC---CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC------CcE
Confidence 47999999999 9999998 889999999999999999999865 7777776666777776542 234
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
++.+....|++++++.+++++.+. +++++++||.++ +.++.++++.+++ .++++++.+. +++..|+.+..+
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~--~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~~~g~v~~~- 148 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADD--EDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKL--DNPSGYGRIVRE- 148 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTT--SEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SCCTTSCEEEEE-
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCC--CcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEec--CCCCcccEEEeC-
Confidence 455667789999999999998643 689999999965 5678999988764 4567777665 456788888886
Q ss_pred CCCceeEeeecCC----CcccCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 160 DTNELLHYTEKPE----TFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 160 ~~~~v~~i~ek~~----~~~~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
++++..+.||+. .....++++|+|+|+++.+ +.+........ ..+++ ..|+
T Consensus 149 -~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~---------------------~~~~~--~~d~ 204 (459)
T 4fce_A 149 -NGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNA---------------------QGEFY--ITDI 204 (459)
T ss_dssp -TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCST---------------------TCSCC--TTHH
T ss_pred -CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCcccc---------------------CCcEE--HHHH
Confidence 589999998752 3456789999999998765 55444321100 11222 1566
Q ss_pred cccCCC-CceEEEeecchhhh--hcCCccccccchHHHHhhccccCCccccCCCC---CCCcEEcCCcEECCCCEECCCC
Q 017417 235 LSPLAG-KKQLYTYETMDFWE--QIKTPGMSLKCSGLYLAQFRLTSPNLLASGDG---TKNATIIGDVYVHPSAKIHPTA 308 (372)
Q Consensus 235 l~~~~~-~~~v~~~~~~~~w~--~i~t~~d~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~i~~~~ 308 (372)
++.+.. ..+++.+..+++|. +|+||+||..|+.++...+.. .++..+.. .....+.+++.|++++.|++++
T Consensus 205 ~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~---~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~ 281 (459)
T 4fce_A 205 IALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAE---KLLLAGVMLLDPSRFDLRGELTHGRDITIDTNV 281 (459)
T ss_dssp HHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHH---HHHHHTCEESCGGGEEEEEEEEECSSCEECTTE
T ss_pred HHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHH---HHHhCCcEEeCCCeEEEeCcEEECCCcEECCCe
Confidence 665544 46899999998774 588999999998776544321 11111111 1234456677788888888888
Q ss_pred EECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 309 KIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 309 ~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
.|.+++.||++|.|++++.|.++.||++|.|+++|.|.+++||+++.||+++.|.++
T Consensus 282 ~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~ 338 (459)
T 4fce_A 282 IIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPG 338 (459)
T ss_dssp EEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTT
T ss_pred eeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCC
Confidence 887788888888888888888888888888888888888888888888888777654
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=2.5e-36 Score=294.91 Aligned_cols=314 Identities=21% Similarity=0.324 Sum_probs=234.2
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+++.+|||||| .|+||++ .+||+|+|++|+|||+|++++|.. ++|++.+..+++.+++... + +.
T Consensus 4 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~----~--~~ 72 (456)
T 2v0h_A 4 KALSAVILAAG--KGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE----Q--VN 72 (456)
T ss_dssp CCEEEEEECCC--CCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC----C--CE
T ss_pred CcceEEEECCC--CCcccCC---CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC----C--cE
Confidence 46899999999 9999986 789999999999999999998765 7777766666677776542 2 34
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
++.++...|++++++.+++++... +++++++||+++ +.++.++++.|.+ +++++++.+. .++..|+.+..+
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~~--~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~~~g~v~~~- 145 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKDN--ENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNL--DNPTGYGRIIRE- 145 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCTT--SEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SSCTTSCEEEEE-
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCC--CeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeec--CCCCccceEEEc-
Confidence 555667789999999999988532 679999999965 5679999988765 5677777665 346778888776
Q ss_pred CCCceeEeeecCCC----cccCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 160 DTNELLHYTEKPET----FVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 160 ~~~~v~~i~ek~~~----~~~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
++++..+.|++.. ....+.++|+|+|+++.+ +.+.+...... ..+++ ..|+
T Consensus 146 -~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~---------------------~~~~~--~~d~ 201 (456)
T 2v0h_A 146 -NGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNA---------------------QGEYY--LTDL 201 (456)
T ss_dssp -TTEEEEEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCST---------------------TCCCC--GGGH
T ss_pred -CCcEEEEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhccccc---------------------cccEE--HHHH
Confidence 5899999988642 235788999999998754 55544321100 11121 1566
Q ss_pred cccCCCC-ceEEEeecchhh--hhcCCccccccchHHHHhhccccCCccccCCCC---CCCcEEcCCcEECCCCEECCCC
Q 017417 235 LSPLAGK-KQLYTYETMDFW--EQIKTPGMSLKCSGLYLAQFRLTSPNLLASGDG---TKNATIIGDVYVHPSAKIHPTA 308 (372)
Q Consensus 235 l~~~~~~-~~v~~~~~~~~w--~~i~t~~d~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~i~~~~ 308 (372)
++.+... .+++.+..+++| .+++||+||.+++..+...... .++..+.. .....+.+++.|++++.|++++
T Consensus 202 ~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~ 278 (456)
T 2v0h_A 202 IALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQAS---KLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNV 278 (456)
T ss_dssp HHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHH---HHHHTTCEESCGGGEEEEEEEEECSSCEECSSE
T ss_pred HHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHH---HHHHcCCEEECCCccEEcCceEECCCCEEcCCc
Confidence 6555443 579999887664 5788999999998766543211 11111111 1235677788899999999999
Q ss_pred EECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 309 KIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 309 ~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
.|.+++.||++|.|++++.|.+|+||++|.|+++|+|.+++||+++.|++++.|.++
T Consensus 279 ~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~ 335 (456)
T 2v0h_A 279 IIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPG 335 (456)
T ss_dssp EEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTT
T ss_pred EEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCC
Confidence 998889999999999999999999999999999999988888888888888888754
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=2.1e-34 Score=263.58 Aligned_cols=234 Identities=21% Similarity=0.344 Sum_probs=190.7
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccC---C----
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN---E---- 75 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~---~---- 75 (372)
.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++++..+++.+|+..... .
T Consensus 2 ~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 79 (281)
T 3juk_A 2 IKKCLFPAAG--YGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGT 79 (281)
T ss_dssp CCEEEEECCS--CCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------C
T ss_pred ceEEEEECCc--CCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcc
Confidence 4799999999 9999999999999999999999999999999876 777777777788888865210 0
Q ss_pred -------------CCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-----hHHHHHHHHhcCCce
Q 017417 76 -------------LRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-----LPEMLDAHRNYGGMG 137 (372)
Q Consensus 76 -------------~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-----l~~~l~~~~~~~~~~ 137 (372)
++.++.++.+..+.|++++++++++++++ ++++|++||++++.+ +.++++.|.+.++ .
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~---~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~ 155 (281)
T 3juk_A 80 NKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGN---EPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-S 155 (281)
T ss_dssp CHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-C
T ss_pred cchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCC---CCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-C
Confidence 24667788888889999999999999964 469999999988777 9999999988777 7
Q ss_pred EEEEEecCCcccccceEEEEcC-CCC--ceeEeeecCC--CcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccch
Q 017417 138 TILVIKVSAESASQFGELVADP-DTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSS 212 (372)
Q Consensus 138 ~i~~~~~~~~~~~~~~~v~~~~-~~~--~v~~i~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 212 (372)
++++..++.+++..||.+..+. .+| +|..|.|||. ...++++++|+|+|++++|+.+.+..+..
T Consensus 156 ~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~~----------- 224 (281)
T 3juk_A 156 IVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGK----------- 224 (281)
T ss_dssp EEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCG-----------
T ss_pred EEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCCC-----------
Confidence 7777777656788999988873 036 9999999986 44578999999999999998887642211
Q ss_pred hhhhhhcccccccccccccccccccCCCCceEEEeecchhhhhcCCccccccchHHHHh
Q 017417 213 FEALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (372)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~ 271 (372)
.++++. .|+++.+..+++|++|..+|+|.+|+||++|.+|+..++.
T Consensus 225 -----------~~e~~l--~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~ 270 (281)
T 3juk_A 225 -----------NNEIQI--TDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYK 270 (281)
T ss_dssp -----------GGSCCH--HHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHH
T ss_pred -----------CCceeH--HHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHh
Confidence 122221 6777777766799999999999999999999999887764
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.5e-33 Score=256.25 Aligned_cols=231 Identities=20% Similarity=0.333 Sum_probs=191.0
Q ss_pred CCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEccc-chHHHHHHHhhccCCCCee
Q 017417 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFY-EEREFALYVSSISNELRIP 79 (372)
Q Consensus 6 ~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~-~~~~i~~~~~~~~~~~~~~ 79 (372)
.+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++.. ..+++.+++.. ...++.+
T Consensus 22 ~~~m~aiIlAaG--~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~-~~~~~~~ 98 (269)
T 4ecm_A 22 SNAMKGIILAGG--TGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS-GQEFGVS 98 (269)
T ss_dssp --CEEEEEECCS--CCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTCE
T ss_pred ccCcEEEEECCC--CccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh-ccccCce
Confidence 467999999999 9999999999999999999999999999999865 6666654 34667788765 2356677
Q ss_pred EEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
+.++.+....|++++++.+++++.. +++++++||+++..++.++++.|++.++++++++.+. +++..|+.+..+
T Consensus 99 i~~~~~~~~~G~~~al~~a~~~~~~---~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~--~~~~~~g~v~~d- 172 (269)
T 4ecm_A 99 FTYRVQDKAGGIAQALGLCEDFVGN---DRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSV--DDPERFGVANIQ- 172 (269)
T ss_dssp EEEEECSSCCCHHHHHHTTHHHHTT---SEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEEC--SCGGGSEEEEEE-
T ss_pred EEEeeCCccCcHHHHHHHHHHhcCC---CcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEEC--CCCCCceEEEEc-
Confidence 8888777789999999999999863 5799999999999899999999998888899998876 357789998887
Q ss_pred CCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCC
Q 017417 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (372)
Q Consensus 160 ~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~ 239 (372)
+++|..+.|||..+...++++|+|+|++++|+.+.+..+.. ..+++. .|+++.+.
T Consensus 173 -~g~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~----------------------~ge~~l--~d~l~~l~ 227 (269)
T 4ecm_A 173 -NRKIIEIEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSA----------------------RGELEI--TDINNWYL 227 (269)
T ss_dssp -TTEEEEEEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCT----------------------TSCBCH--HHHHHHHH
T ss_pred -CCEEEEEEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCC----------------------CCeeeH--HHHHHHHH
Confidence 48999999999777788999999999999998887653210 122321 57777777
Q ss_pred CCceEEEeecchhhhhcCCccccccchHHHH
Q 017417 240 GKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 240 ~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~ 270 (372)
.++++.++..+++|.+|+||+||.+|+..+.
T Consensus 228 ~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~ 258 (269)
T 4ecm_A 228 KRGVLTYNEMSGWWTDAGTHVSLQRANALAR 258 (269)
T ss_dssp HTTCEEEEECCSCEEECSSHHHHHHHHHHTT
T ss_pred HcCCEEEEEeCCEEEeCCCHHHHHHHHHHHH
Confidence 6678999999999999999999999877653
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=1.2e-32 Score=254.45 Aligned_cols=237 Identities=20% Similarity=0.283 Sum_probs=183.3
Q ss_pred CCCCCCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccC-
Q 017417 1 MGSSEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN- 74 (372)
Q Consensus 1 ~~~~~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~- 74 (372)
|.++|++.|++|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++.+..+++.+|+.....
T Consensus 1 ~~~~~~~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l 78 (302)
T 2e3d_A 1 MAAINTKVKKAVIPVAG--LGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFEL 78 (302)
T ss_dssp ----CCSCCEEEEECCS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHH
T ss_pred CcchhhcccEEEEECCc--CcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhh
Confidence 67778889999999999 9999999999999999999999999999998765 677766666778888864110
Q ss_pred --------------------CCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeec-----C---ChHHH
Q 017417 75 --------------------ELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS-----F---PLPEM 126 (372)
Q Consensus 75 --------------------~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~-----~---~l~~~ 126 (372)
..+.++.++.+....|++++++.+++++.+ +++++++||+++. . ++.++
T Consensus 79 ~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~~~~~~l~~l 155 (302)
T 2e3d_A 79 EAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGD---EPVAVILPDVILDEYESDLSQDNLAEM 155 (302)
T ss_dssp HHHHC----CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEECTTSSCTTTSTHHHH
T ss_pred hhhhhhccchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCC---CcEEEEcCCccccCccccchHHHHHHH
Confidence 124567777777789999999999999863 4699999999986 2 79999
Q ss_pred HHHHHhcCCceEEEEEecCCcccccceEEEEcC---CCC---ceeEeeecCC--CcccCceeeeEEEeCHhhHHHhhhcc
Q 017417 127 LDAHRNYGGMGTILVIKVSAESASQFGELVADP---DTN---ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVS 198 (372)
Q Consensus 127 l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~---~~~---~v~~i~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~ 198 (372)
++.|++.++ +++++.+. +++..||.+..+. ++| +|..|.|||. ...+.++++|+|+|++++|+.+.+..
T Consensus 156 ~~~~~~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~ 232 (302)
T 2e3d_A 156 IRRFDETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTP 232 (302)
T ss_dssp HHHHHHHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCC
T ss_pred HHHHHhcCC-cEEEEEEc--cCCCCccEEEecccccCCCCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhC
Confidence 999987766 67777665 4577899887631 246 8999999974 34567899999999999998887643
Q ss_pred cccchhhhhhccchhhhhhhcccccccccccccccccccCCCCceEEEeecchhhhhcCCccccccchHHH
Q 017417 199 SQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (372)
+.. ..+++ ..++++.+.++++++++.++++|.||+||++|.+|+..+
T Consensus 233 ~~~----------------------~~~~~--l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~ 279 (302)
T 2e3d_A 233 PGA----------------------GDEIQ--LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEY 279 (302)
T ss_dssp C--------------------------CCC--HHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHH
T ss_pred CCC----------------------CCcee--hHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHH
Confidence 210 11121 145666655556899999999999999999999998444
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.97 E-value=7.4e-32 Score=248.59 Aligned_cols=234 Identities=19% Similarity=0.260 Sum_probs=165.0
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhcc--------
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSIS-------- 73 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~-------- 73 (372)
..|++|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++.+..+++.+++....
T Consensus 13 ~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 13 PLRKAVFPVAG--LGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCCEEEEEECC--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHT
T ss_pred CccEEEEECCC--CccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhh
Confidence 56899999999 9999999999999999999999999999998765 77776666677888876421
Q ss_pred -----------CCCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeec---CChHHHHHHHHhcCCceEE
Q 017417 74 -----------NELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS---FPLPEMLDAHRNYGGMGTI 139 (372)
Q Consensus 74 -----------~~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~---~~l~~~l~~~~~~~~~~~i 139 (372)
...+.++.++.++...|++++++.+++++.+ +++++++||+++. .++.++++.|++.++ .++
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i 166 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGD---EPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLI 166 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCS---SCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEE
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCC---CcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEE
Confidence 0023456777777789999999999998863 5699999999986 469999999987665 566
Q ss_pred EEEecCCcccccceEEEEcC-CCC--ceeEeeecCC--CcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhh
Q 017417 140 LVIKVSAESASQFGELVADP-DTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFE 214 (372)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~~-~~~--~v~~i~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 214 (372)
++.+...+++..||.+..+. +++ +|..|.|||. ...+.++++|+|+|++++|+.+.+..+..
T Consensus 167 ~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~------------- 233 (297)
T 2ux8_A 167 CAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGA------------- 233 (297)
T ss_dssp EEC-----------CCCCCCBCSSEEEC--------------CCCEEEEEEECTHHHHHHHHTC----------------
T ss_pred EEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCC-------------
Confidence 66555434567788776552 234 8999999874 34567899999999999998887643220
Q ss_pred hhhhcccccccccccccccccccCCCCceEEEeecchhhhhcCCccccccchHHHH
Q 017417 215 ALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~ 270 (372)
..+++ ..++++.+.++++++++..+++|.+|+||+||.+|+..+.
T Consensus 234 ---------~~~~~--l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~ 278 (297)
T 2ux8_A 234 ---------GGEIQ--LTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVA 278 (297)
T ss_dssp ----------------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHH
T ss_pred ---------CCeeE--HHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHH
Confidence 11222 1577777777779999999999999999999999986554
No 12
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=8.8e-31 Score=240.41 Aligned_cols=230 Identities=19% Similarity=0.298 Sum_probs=182.5
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEc-ccchHHHHHHHhhccCCCCeeEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVG-FYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~-~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+|++|||||| .|+||+|+|...||+|+|++|+|||+|+++.+.. |+|++ .++.+.+.+++++. .+|+.++.
T Consensus 2 ~~~aIILAgG--~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~ 78 (293)
T 1fxo_A 2 KRKGIILAGG--SGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDG-SNWGLDLQ 78 (293)
T ss_dssp CEEEEEECCC--CCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEE
T ss_pred CceEEEECCC--CCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcc-cccCceEE
Confidence 4899999999 9999999999999999999999999999998765 55544 55566788888752 34677777
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~ 160 (372)
++.++.+.|++++++.+++++.+ ++++++.||.++ ..++.++++.|.+.+.+++++..++ .++..||.+.++.
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~~g~v~~d~- 152 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGN---DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV--LDPERYGVVEFDQ- 152 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTT---SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEEC--SCGGGSEEEEECT-
T ss_pred EeeCCCCCCHHHHHHHHHHHhCC---CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEEC--CCcccCcEEEECC-
Confidence 88777789999999999999864 468888899987 6689999999977667778777776 4577899999886
Q ss_pred CCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCC
Q 017417 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (372)
Q Consensus 161 ~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~ 240 (372)
+++|..|.|||..+.++++++|+|+|++++++.+.+..+.. .+++.. +|+++.+.+
T Consensus 153 ~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~----------------------~ge~~~--td~~~~~l~ 208 (293)
T 1fxo_A 153 GGKAISLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSP----------------------RGELEI--TDVNRAYLE 208 (293)
T ss_dssp TSCEEEEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCT----------------------TSSCCH--HHHHHHHHH
T ss_pred CCcEEEEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCccc----------------------CCceeH--HHHHHHHHh
Confidence 68999999998777788999999999999998887643211 111111 455655555
Q ss_pred CceEEEeecc-hh-hhhcCCccccccchHHHH
Q 017417 241 KKQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 241 ~~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~~ 270 (372)
.+++.++... ++ |.|++||+||.+|+..+.
T Consensus 209 ~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 209 RGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp TTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 5677777664 75 999999999999987654
No 13
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=1.8e-30 Score=238.39 Aligned_cols=230 Identities=18% Similarity=0.296 Sum_probs=180.6
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEc-ccchHHHHHHHhhccCCCCeeEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVG-FYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~-~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
.|++|||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++ +++.+.+.+++.+. .++++++.
T Consensus 3 ~m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g-~~~g~~i~ 79 (295)
T 1lvw_A 3 HMKGIVLAGG--SGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDG-SQFGVRFS 79 (295)
T ss_dssp SCEEEEECCC--CCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTSEEE
T ss_pred ceEEEEECCC--CCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhc-cccCceEE
Confidence 4799999999 9999999999999999999999999999998765 66554 45667788888752 34677777
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~ 160 (372)
++.++.+.|++++++.+++++.+ ++++++.||.++ ..++.++++.+.+.+..+++++.++ .++..|+.+.++.
T Consensus 80 ~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~~g~v~~d~- 153 (295)
T 1lvw_A 80 YRVQEEPRGIADAFIVGKDFIGD---SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYV--RDPRPFGVVEFDS- 153 (295)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTT---SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEEC--SCCTTSEEEEECT-
T ss_pred EeeCCCCCChHHHHHHHHHHhCC---CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEEC--CCcccCCEEEECC-
Confidence 77777788999999999999864 346777799987 6789999999977667778877776 3567899999886
Q ss_pred CCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCC
Q 017417 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (372)
Q Consensus 161 ~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~ 240 (372)
+++|..|.|||..+.++++++|+|+|++++++.+.+..+.. ..++.. +|+++.+.+
T Consensus 154 ~g~v~~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~~----------------------~ge~~~--td~~~~~l~ 209 (295)
T 1lvw_A 154 EGRVISIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPSD----------------------RGELEI--TSVNEEYLR 209 (295)
T ss_dssp TSBEEEEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCCT----------------------TSCCCH--HHHHHHHHH
T ss_pred CCcEEEEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCcc----------------------cCceeH--HHHHHHHHH
Confidence 68999999999767778999999999999998876643211 111111 455555555
Q ss_pred CceEEEeecc-hh-hhhcCCccccccchHHHH
Q 017417 241 KKQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 241 ~~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~~ 270 (372)
.+++.++... ++ |.|++||+||.+|+..+.
T Consensus 210 ~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 210 MGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp TTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred cCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 5666666664 75 999999999999987654
No 14
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=1e-30 Score=240.06 Aligned_cols=229 Identities=19% Similarity=0.266 Sum_probs=180.5
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEc-ccchHHHHHHHhhccCCCCeeEEE
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVG-FYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~-~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
|++|||||| .|+||+|+|...||+|+|++|+|||+|+++.+.. |+|++ .++.+.+.+++.+. .+++.++.+
T Consensus 4 m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~~ 80 (296)
T 1mc3_A 4 MKGIILAGG--SGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDG-SEFGIQLEY 80 (296)
T ss_dssp CEEEEECCC--CCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEEE
T ss_pred cEEEEECCC--CCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcc-cccCceEEE
Confidence 789999999 9999999999999999999999999999998765 66554 45666788888652 346777777
Q ss_pred ecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCCC
Q 017417 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDT 161 (372)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~ 161 (372)
+.++.+.|++++++.+++++.+ ++++++.||+++ ..++.++++.|.+.+.+++++..++ .++..||.+.+++ +
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~yg~v~~d~-~ 154 (296)
T 1mc3_A 81 AEQPSPDGLAQAFIIGETFLNG---EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQV--MDPERFGVVEFDD-N 154 (296)
T ss_dssp EECSSCCCSTHHHHHTHHHHTT---SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEEC--SCCSSSBBCEEET-T
T ss_pred eccCCCCCHHHHHHHHHHHhCC---CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEEC--CCcccCCEEEECC-C
Confidence 7777789999999999999864 346667799987 6689999999876666778877776 4567899988885 6
Q ss_pred CceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCCC
Q 017417 162 NELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGK 241 (372)
Q Consensus 162 ~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~ 241 (372)
++|..|.|||..+.++++++|+|+|++++++.+.+..+.. .+++.. +|+++.+.+.
T Consensus 155 g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~----------------------~ge~~~--td~~~~~l~~ 210 (296)
T 1mc3_A 155 FRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSE----------------------RGELEI--TSINQMYLEA 210 (296)
T ss_dssp EEEEECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCCS----------------------SSSCCH--HHHHHHHHHT
T ss_pred CcEEEEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCccc----------------------cCCccH--HHHHHHHHhc
Confidence 8999999999777788999999999999998876643221 111211 4555555555
Q ss_pred ceEEEeecc-hh-hhhcCCccccccchHHHH
Q 017417 242 KQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 242 ~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~~ 270 (372)
+++.++... ++ |.|++||++|.+|+..+.
T Consensus 211 g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 211 GNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp TCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 667777665 75 999999999999987654
No 15
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.97 E-value=1.8e-30 Score=234.48 Aligned_cols=224 Identities=22% Similarity=0.422 Sum_probs=165.7
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhcc---CCCCe-
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSIS---NELRI- 78 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~---~~~~~- 78 (372)
.|.+|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++++..+.+.+++.... ..+..
T Consensus 2 ~~~avIlAaG--~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (259)
T 1tzf_A 2 ASKAVILAGG--LGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFH 79 (259)
T ss_dssp CCEEEEEECS--CC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEE
T ss_pred CcEEEEECCC--CcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhccccccccccc
Confidence 4789999999 9999999999999999999999999999998765 77777666677888886532 11111
Q ss_pred ----------------eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEE
Q 017417 79 ----------------PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVI 142 (372)
Q Consensus 79 ----------------~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~l~~~l~~~~~~~~~~~i~~~ 142 (372)
.+.+..+....|++++++.+++++..+ +++++++||++++.++.++++.|++.++++++...
T Consensus 80 ~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 80 MAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp GGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTS--SCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCC--CcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 122233445689999999999988433 57999999999888999999999887777776543
Q ss_pred ecCCcccccceEEEEcCCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccc
Q 017417 143 KVSAESASQFGELVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (372)
Q Consensus 143 ~~~~~~~~~~~~v~~~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (372)
. .+..|+.+..+ +|+|..|.|||.. ...++++|+|+|++++|+.+.+.
T Consensus 158 ~----~~~~~g~v~~~--~g~v~~~~ekp~~-~~~~~~~Giy~~~~~~l~~l~~~------------------------- 205 (259)
T 1tzf_A 158 F----PPGRFGALDIQ--AGQVRSFQEKPKG-DGAMINGGFFVLNPSVIDLIDND------------------------- 205 (259)
T ss_dssp C----CCCCSEEEEEE--TTEEEEEEESCSC-CSCCEECCCEEECGGGGGGCCST-------------------------
T ss_pred c----CCCCccEEEEc--CCEEEEEEecCCC-CCceEEEEEEEeCHHHHHhhccc-------------------------
Confidence 2 36779988887 5899999999864 25689999999999988655321
Q ss_pred cccccccccccccccCCCCceEEEeecchhhhhcCCccccccchHHHHh
Q 017417 223 LTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (372)
Q Consensus 223 ~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~ 271 (372)
..+| ..++++.+.++++++++..+++|.+|+||+||.+++..+..
T Consensus 206 -~~~~---~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 206 -ATTW---EQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp -TCCT---TTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHT
T ss_pred -cccc---HHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhc
Confidence 0111 14556555555689999999999999999999999877654
No 16
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=1e-30 Score=243.67 Aligned_cols=235 Identities=18% Similarity=0.254 Sum_probs=180.5
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccC-------
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN------- 74 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~------- 74 (372)
+.|++|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++.+..+.+.+++.....
T Consensus 11 ~~~~aVIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 11 AVKTVVVPAAG--LGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLME 88 (323)
T ss_dssp -CCEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHH
T ss_pred cceEEEEECCC--CccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhc
Confidence 45899999999 9999999999999999999999999999998765 667666666677777653100
Q ss_pred -------------CCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeec--CChHHHHHHHHhcCCceEE
Q 017417 75 -------------ELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS--FPLPEMLDAHRNYGGMGTI 139 (372)
Q Consensus 75 -------------~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~--~~l~~~l~~~~~~~~~~~i 139 (372)
..+.++.++.++...|++++++.+++++..+ ++.++|++||++++ .++.++++.|++.++ .++
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~-~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i 166 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDD-EDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVL 166 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSS-CCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCC-CCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEE
Confidence 0235566777777799999999999888542 24599999999996 569999999887654 566
Q ss_pred EEEecCCcccccceEEEEc----CCCC--ceeEeeecCC--CcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccc
Q 017417 140 LVIKVSAESASQFGELVAD----PDTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVS 211 (372)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~----~~~~--~v~~i~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~ 211 (372)
++.++..+++..||.+..+ . ++ +|..|.|||. ...+.++++|+|+|++++|+.+.+..+..
T Consensus 167 ~~~~~~~~~~~~yg~v~~d~~~~~-~~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~---------- 235 (323)
T 2pa4_A 167 CAVEVSEADVSKYGIFEIEADTKD-SDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGA---------- 235 (323)
T ss_dssp EEEECCGGGGGGSEEEEEEECCSS-TTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCG----------
T ss_pred EEEEecccccCCccEEEeCCcccC-CCceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCC----------
Confidence 6666654567789988876 3 33 8999999983 44567899999999999998887643220
Q ss_pred hhhhhhhcccccccccccccccccccCCCC-ceEEEeecchhhhhcCCccccccchHHHH
Q 017417 212 SFEALQSATRNLTTDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~-~~v~~~~~~~~w~~i~t~~d~~~a~~~~~ 270 (372)
.++++. .++++.+.++ .+|+++.++++|.+|+||+||.+++..++
T Consensus 236 ------------~ge~~l--~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~ 281 (323)
T 2pa4_A 236 ------------GGELQL--TDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFG 281 (323)
T ss_dssp ------------GGCCCH--HHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHH
T ss_pred ------------CCeEeH--HHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHh
Confidence 112221 4666666554 78999999999999999999999986554
No 17
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=1.9e-30 Score=239.56 Aligned_cols=235 Identities=18% Similarity=0.213 Sum_probs=180.2
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCccc--CCcchhhhhHhhcce-----EEEEcccc-hHHHHHHHhhccCCCCe
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL--GGQPMVHHPISACKR-----IYLVGFYE-EREFALYVSSISNELRI 78 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv--~g~pli~~~l~~l~~-----i~vv~~~~-~~~i~~~~~~~~~~~~~ 78 (372)
+++.+|||||| .|+||+| ||+|+|+ +|+|||+|+++.+.. |+|++.+. .+.+.+++.+. ..++.
T Consensus 4 m~~~~vIlAaG--~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~-~~~~~ 75 (303)
T 3pnn_A 4 MKPTLFVLAAG--MGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTK-YEGRI 75 (303)
T ss_dssp CCCEEEEECTT--CBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHH-HTTTS
T ss_pred CceEEEEECCC--CcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHH-hccCC
Confidence 36899999999 9999999 8999999 599999999998765 66666655 47888888763 23345
Q ss_pred eEEEecCC---------------cccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHHh---cCCceEE
Q 017417 79 PVRYLRED---------------KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRN---YGGMGTI 139 (372)
Q Consensus 79 ~i~~~~~~---------------~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~~---~~~~~~i 139 (372)
++.++.++ .++|+++++++++++++ ++|+|++||++++.+ +.++++.|.+ .++++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v 151 (303)
T 3pnn_A 76 PVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCM 151 (303)
T ss_dssp CEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEE
T ss_pred cEEEEecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccccCceEE
Confidence 66776655 57999999999999983 459999999998665 9999999876 5678899
Q ss_pred EEEecCCccc-ccc-----eEEEEcCCCCceeEeeecCCC-------------------cccCceeeeEEEeCHhhHHHh
Q 017417 140 LVIKVSAESA-SQF-----GELVADPDTNELLHYTEKPET-------------------FVSDLINCGVYVFTPDIFNAI 194 (372)
Q Consensus 140 ~~~~~~~~~~-~~~-----~~v~~~~~~~~v~~i~ek~~~-------------------~~~~~~~~Giy~~~~~~~~~l 194 (372)
++.+.. ++ ..| |.+.+++ +|+|..|.|||.. +.++++++|+|+|++++|+.+
T Consensus 152 ~~~~~~--~~~~~~g~~~~G~v~~d~-~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l 228 (303)
T 3pnn_A 152 VGYRVG--NTLSESGGVSRGVCQVDE-KHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYS 228 (303)
T ss_dssp EEEEGG--GSCBTTBCEEEEEEEECT-TSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHH
T ss_pred EEEECC--CccCccCceeeeeEeeCC-CCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHHHH
Confidence 888873 34 455 5778875 6899999999853 257899999999999999988
Q ss_pred hhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCCCc--eEEEeecchhhhhcCCccccccchHHHHhh
Q 017417 195 QGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGKK--QLYTYETMDFWEQIKTPGMSLKCSGLYLAQ 272 (372)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~--~v~~~~~~~~w~~i~t~~d~~~a~~~~~~~ 272 (372)
.+......... ......+|+. +|+++.+++++ +|++|..+++|.+|++|++|.+|+..+...
T Consensus 229 ~~~~~~~l~~~--------------~~~~~~e~~l--~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~~ 292 (303)
T 3pnn_A 229 EELFINFLNAH--------------GQEPKSEFFI--PFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLREL 292 (303)
T ss_dssp HHHHHHHHHHH--------------TTCSSCCCCH--HHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--------------CCCcCCcEEh--HHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHHH
Confidence 75321110000 0011233432 67888777665 899999999999999999999998876543
No 18
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.96 E-value=5.3e-30 Score=230.66 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=160.5
Q ss_pred eEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCe--eEE
Q 017417 10 VAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRI--PVR 81 (372)
Q Consensus 10 ~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~--~i~ 81 (372)
.+|||||| .||||+|+|.++||+|+||+|+|||+|+|+++.. |+|++.+..+ +.+++.+....++. ...
T Consensus 1 ~~iIlAaG--~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~ 77 (255)
T 4evw_A 1 MIVIPMAG--MSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYI 77 (255)
T ss_dssp CEEEECCS--CCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEE
T ss_pred CEEEEcCC--CCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCCCceE
Confidence 47999999 9999999999999999999999999999999854 5555544433 44444432122221 123
Q ss_pred EecCCcccChHHHHHHHHHHhh-----ccCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEecCCcccccceEE
Q 017417 82 YLREDKPHGSAGALYNFRDLIM-----EDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGEL 155 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~-----~~~~~~vlv~~gD~i~-~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v 155 (372)
++.++.+.|+++|++++++++. .+ ++++|++||+++ +.++.++ ..++++++++.++. ++ +||.+
T Consensus 78 ~~~~~~~~Gt~~av~~a~~~l~~~~~~~~--~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~--~p-~yG~v 147 (255)
T 4evw_A 78 AELHTETRGQAETVTLGLEELAKQGVDYQ--GSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG--GD-NWSFA 147 (255)
T ss_dssp EEESSCCSSHHHHHHHHHHHHHHTTCCCC--SCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--SS-CSCEE
T ss_pred EEeCCCCCCHHHHHHHHHHHHhhcccCCC--CcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--CC-ceeEE
Confidence 4456778999999999999993 23 569999999988 5566553 24567888888874 34 89999
Q ss_pred EEcCCCC--ceeEeeecCCCcccCceeeeEEEeCHh--hHHHhhhcccccchhhhhhccchhhhhhhccccccccccccc
Q 017417 156 VADPDTN--ELLHYTEKPETFVSDLINCGVYVFTPD--IFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLD 231 (372)
Q Consensus 156 ~~~~~~~--~v~~i~ek~~~~~~~~~~~Giy~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (372)
..++ +| +|.+|.||+ +.++++++|+|+|++. +++.+.+........ ...++|+ .
T Consensus 148 ~~d~-~g~~~V~~i~EK~--~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~-----------------~~~gE~~--l 205 (255)
T 4evw_A 148 KPEH-AGSTKVIQTAEKN--PISDLCSTGLYHFNRKEDYLEAYREYVARPSQE-----------------WERGELY--I 205 (255)
T ss_dssp EESS-TTCCBEEEEESSS--CSSSEEEEEEEEESCHHHHHHHHHHHHTSCGGG-----------------CSCSCCC--S
T ss_pred EECC-CCCeEEEEEEecc--CccCcEEEeEEEECcHHHHHHHHHHHHhccccc-----------------ccCCeEe--h
Confidence 9986 57 999999994 3478999999999974 334444321110000 0023444 2
Q ss_pred ccccccCCC-CceEEEeecc-hhhhhcCCccccccchH
Q 017417 232 QDILSPLAG-KKQLYTYETM-DFWEQIKTPGMSLKCSG 267 (372)
Q Consensus 232 ~d~l~~~~~-~~~v~~~~~~-~~w~~i~t~~d~~~a~~ 267 (372)
+|+++.+.+ +.+|+++.++ ++|.++|+|++|.++..
T Consensus 206 td~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 206 APLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp TTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 788887754 4579999885 99999999999888643
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=2.1e-29 Score=233.18 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=150.0
Q ss_pred CCCCeeEEEEeCCCCCCCccccCcc-cCCCCCccc-CCcchhhhhHhhcce----EEEEcccc-hHHHHHHHhhccCCCC
Q 017417 5 EDDKVVAVIMVGGPTKGTRFRPLSL-NIPKPLFPL-GGQPMVHHPISACKR----IYLVGFYE-EREFALYVSSISNELR 77 (372)
Q Consensus 5 ~~~~~~~vIlAaG~~~g~R~~~lt~-~~pK~llpv-~g~pli~~~l~~l~~----i~vv~~~~-~~~i~~~~~~~~~~~~ 77 (372)
|.++|.+|||||| .|+||+|+|. .+||+|+|+ +|+|||+|+++++.. |+|++.+. .+.+.+++... ++
T Consensus 1 m~~~~~avIlAgG--~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~~~~i~vv~~~~~~~~i~~~~~~~---~~ 75 (308)
T 2qh5_A 1 MSLKIKNILLSGG--SGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASLVDETLIVCNEKHYFLALEEIKNE---IK 75 (308)
T ss_dssp --CCEEEEEECC---------------CCGGGCTTBTTBCHHHHHHHHHHTTCSEEEEEEEGGGHHHHHHHTTTT---CS
T ss_pred CCCccEEEEEcCC--CCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHccCCCEEEEEChhHHHHHHHHHHHh---hC
Confidence 4467999999999 9999999996 899999999 599999999998754 66666554 34677777541 44
Q ss_pred e-eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-cCC-hHHHHHH---HHhcCCceEEEEEecCCccccc
Q 017417 78 I-PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFP-LPEMLDA---HRNYGGMGTILVIKVSAESASQ 151 (372)
Q Consensus 78 ~-~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~~~-l~~~l~~---~~~~~~~~~i~~~~~~~~~~~~ 151 (372)
. ++.++.++...|++++++.++.+++.+ +++++++||+++ +.+ +.++++. |.+.++++++++.+. ..+..
T Consensus 76 ~~~~~~i~~~~~~gt~~al~~a~~~l~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~--~~~~~ 151 (308)
T 2qh5_A 76 NKSVGFLLESLSKNTANAIALSALMSDKE--DLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID--KPNTE 151 (308)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHTSCTT--SEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS--SCCTT
T ss_pred CCccEEEeCCCCCChHHHHHHHHHHhCCC--CeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC--CCCCC
Confidence 4 556666777789999999999988432 469999999998 555 8999887 666667788877765 34567
Q ss_pred ceEEEEcCCCCceeEeeecCCCcc--------cCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhcccc
Q 017417 152 FGELVADPDTNELLHYTEKPETFV--------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (372)
Q Consensus 152 ~~~v~~~~~~~~v~~i~ek~~~~~--------~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (372)
||.+..+. +++|..|.|||.... ..++++|+|+|++++| +.+.+..+...+..+ ..+.....+
T Consensus 152 ~g~i~~d~-~~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~-------~~~~~~~~~ 223 (308)
T 2qh5_A 152 FGYIESPN-GLDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCE-------RAFESLENA 223 (308)
T ss_dssp SEEEECSS-SSBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHH-------HHGGGCEEE
T ss_pred ceEEEECC-CCEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHH-------HHhhccccc
Confidence 99888774 689999999986421 4688999999998764 666544322111100 000000000
Q ss_pred --cccccccccccc--------ccc--CCCCceEEEeecchhhhhcCCccccccchH
Q 017417 223 --LTTDFVRLDQDI--------LSP--LAGKKQLYTYETMDFWEQIKTPGMSLKCSG 267 (372)
Q Consensus 223 --~~~~~~~~~~d~--------l~~--~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~ 267 (372)
...++..+..++ ++. +.+..+|+++..+++|.+++||++|.+++.
T Consensus 224 ~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~ 280 (308)
T 2qh5_A 224 YFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAA 280 (308)
T ss_dssp CCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC------------
T ss_pred cccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhh
Confidence 001111111122 222 344578999999999999999999988754
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.93 E-value=1.2e-25 Score=202.10 Aligned_cols=222 Identities=13% Similarity=0.153 Sum_probs=166.7
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
++.+|||||| .|+|| | ||+|+|++|+|||+|+++.+.. |+|++. .+.+.+++.. ++.++.+
T Consensus 2 ~~~aiIlA~G--~stRl-p-----~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~----~g~~v~~ 67 (252)
T 3oam_A 2 SFTVVIPARY--QSTRL-P-----GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA----FGGVVCM 67 (252)
T ss_dssp CEEEEEECCC--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEEE
T ss_pred ceEEEEecCc--CCCCC-C-----CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH----cCCEEEE
Confidence 5899999999 99999 4 7999999999999999998865 666663 3567777764 3566777
Q ss_pred ecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccc-----eEE
Q 017417 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQF-----GEL 155 (372)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~-----~~v 155 (372)
..++.+.|+++ +..+.+.+.....+.+++++||.++ ..++.++++.|.+.++++++++.++. ++..| +.+
T Consensus 68 ~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~~~p~~g~v 144 (252)
T 3oam_A 68 TSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEVFNPNAVKV 144 (252)
T ss_dssp CCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHHTCTTSCEE
T ss_pred cCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHhhCCCceEE
Confidence 66667788877 5666666632123689999999976 56799999999888888999988874 45556 888
Q ss_pred EEcCCCCceeEeeecCCC-------------cccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccc
Q 017417 156 VADPDTNELLHYTEKPET-------------FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (372)
Q Consensus 156 ~~~~~~~~v~~i~ek~~~-------------~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (372)
..|. +|+++.|.++|.. +...+.++|+|.|++++|+.+....+...+..+
T Consensus 145 v~d~-~g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E---------------- 207 (252)
T 3oam_A 145 ITDK-SGYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIE---------------- 207 (252)
T ss_dssp EECT-TSBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHH----------------
T ss_pred EECC-CCeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccc----------------
Confidence 8886 6999999887521 235789999999999999998765433221111
Q ss_pred cccccccccccccccCCCCceEEEeecc-hhhhhcCCccccccchHHHHh
Q 017417 223 LTTDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYLA 271 (372)
Q Consensus 223 ~~~~~~~~~~d~l~~~~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~~~ 271 (372)
. -+.+..+..+.+|+++..+ .+|.+|+||+|+.+|+..+..
T Consensus 208 ----~----le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~ 249 (252)
T 3oam_A 208 ----C----LEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAE 249 (252)
T ss_dssp ----T----CTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ----h----hHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHh
Confidence 0 1223334456789988664 578999999999999887643
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.93 E-value=4e-26 Score=213.13 Aligned_cols=231 Identities=16% Similarity=0.260 Sum_probs=159.0
Q ss_pred eeEEEEeCCCCCCCccccCc-ccCCCCCcccCC-cchhhhhHhhcce------EEEEcccc-hHHHHHHHhhccCCCCee
Q 017417 9 VVAVIMVGGPTKGTRFRPLS-LNIPKPLFPLGG-QPMVHHPISACKR------IYLVGFYE-EREFALYVSSISNELRIP 79 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt-~~~pK~llpv~g-~pli~~~l~~l~~------i~vv~~~~-~~~i~~~~~~~~~~~~~~ 79 (372)
|.+|||||| .|+||+|+| ..+||+|+|++| +|||+|+++++.. ++|++.+. ...+.+++.... .+ .
T Consensus 2 m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~-~~--~ 76 (336)
T 2x65_A 2 MKALILAGG--SGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP-DE--N 76 (336)
T ss_dssp CEEEEECCC--BCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC-GG--G
T ss_pred eEEEEECCC--CCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc-cc--e
Confidence 689999999 999999999 789999999999 9999999998654 66666554 445777776532 11 2
Q ss_pred EEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecC--ChHH----HHHHHHhcCCceEEEEEecCCcccccce
Q 017417 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSF--PLPE----MLDAHRNYGGMGTILVIKVSAESASQFG 153 (372)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~--~l~~----~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 153 (372)
++.++...|++.++..+...+..+ +.+++++||+++.. ++.+ +++.|++.++.+|+.+.+.. ....||
T Consensus 77 --ii~e~~~~gta~ai~~a~~~~~~~--~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~--~~~~yG 150 (336)
T 2x65_A 77 --IIAEPMKKNTAPACFIGTKLADDD--EPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTR--PETGYG 150 (336)
T ss_dssp --EEEESSCCCHHHHHHHHHTTSCTT--CEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCS--CCSSSE
T ss_pred --EEeCCCCCCcHHHHHHHHHhhCCC--CEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeeccc--CCCCce
Confidence 244556789999999888766432 57999999999843 4544 44446665666777666653 246799
Q ss_pred EEEEcCC----CCceeEeeecCCCcc--------cCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhcc
Q 017417 154 ELVADPD----TNELLHYTEKPETFV--------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSAT 220 (372)
Q Consensus 154 ~v~~~~~----~~~v~~i~ek~~~~~--------~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (372)
.+..+.+ .++|..|.|||.... ..++++|+|+|+++.| +.+.+..+...... ....
T Consensus 151 ~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~~~~-----------~~~~ 219 (336)
T 2x65_A 151 YIEIGEELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENL-----------KDVD 219 (336)
T ss_dssp EEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHH-----------TTCC
T ss_pred EEEECCccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHHHHH-----------HHhh
Confidence 8887631 168999999986421 2578999999998776 67665443321110 0000
Q ss_pred ccccccccccccccccc----------CCCCceEEEeecchhhhhcCCccccccc
Q 017417 221 RNLTTDFVRLDQDILSP----------LAGKKQLYTYETMDFWEQIKTPGMSLKC 265 (372)
Q Consensus 221 ~~~~~~~~~~~~d~l~~----------~~~~~~v~~~~~~~~w~~i~t~~d~~~a 265 (372)
.... +|. .++++. +.+..++++++.+++|.|+|||++|.++
T Consensus 220 ~~~e-~~~---~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 220 PRNF-EEL---KKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp TTCH-HHH---HHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred hhhh-hHH---HHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 0000 111 233321 3345789999999999999999998775
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.92 E-value=2.8e-25 Score=207.44 Aligned_cols=234 Identities=18% Similarity=0.247 Sum_probs=153.7
Q ss_pred CeeEEEEeCCCCCCCccccCc-ccCCCCCcccCC-cchhhhhHhhcce------EEEEcccc-hHHHHHHHhhccCCCCe
Q 017417 8 KVVAVIMVGGPTKGTRFRPLS-LNIPKPLFPLGG-QPMVHHPISACKR------IYLVGFYE-EREFALYVSSISNELRI 78 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt-~~~pK~llpv~g-~pli~~~l~~l~~------i~vv~~~~-~~~i~~~~~~~~~~~~~ 78 (372)
+|.+|||||| .|+||+|+| ..+||+|+|++| +|||+|+++++.. ++|++.+. ...+.+++.. .
T Consensus 2 ~m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~------~ 73 (337)
T 2cu2_A 2 KTYALVMAGG--RGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG------I 73 (337)
T ss_dssp CEEEEEECCC--CCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS------S
T ss_pred CeEEEEEcCC--CcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc------C
Confidence 4899999999 999999999 689999999999 9999999998754 66666544 3334444432 1
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhcc-CCCeEEEEcCCeeecC--ChHHHHHH----HHhcCCceEEEEEecCCccccc
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMED-NPSHIFLLNCDVCCSF--PLPEMLDA----HRNYGGMGTILVIKVSAESASQ 151 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~-~~~~vlv~~gD~i~~~--~l~~~l~~----~~~~~~~~~i~~~~~~~~~~~~ 151 (372)
++ +.++...|++.++..+.. +... ..+.+++++||+++.. .+..+++. +++ ++.+|+.+.+.. .+..
T Consensus 74 ~~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~--~~t~ 147 (337)
T 2cu2_A 74 RL--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR--PETE 147 (337)
T ss_dssp EE--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS--CCSS
T ss_pred ce--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC--CCCC
Confidence 22 334567899999998877 5321 1257999999999843 45555543 333 456666666543 3567
Q ss_pred ceEEEEcCCC----CceeEeeecCCCcc-------cCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhc
Q 017417 152 FGELVADPDT----NELLHYTEKPETFV-------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSA 219 (372)
Q Consensus 152 ~~~v~~~~~~----~~v~~i~ek~~~~~-------~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (372)
||.+..++ + ++|..|.|||.... ..++++|+|+|+++.| +.+.+..+....... .+...
T Consensus 148 yG~I~~~~-~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~-------~~~~~- 218 (337)
T 2cu2_A 148 YGYIRLGP-REGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHEALE-------RLLAG- 218 (337)
T ss_dssp SCEEEEEE-EETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHHHHH-------HHHTT-
T ss_pred ceEEEECC-cccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHHHHH-------HHhcC-
Confidence 99988764 3 78999999986321 1689999999998876 777665433211110 00000
Q ss_pred ccccccccccccccccc--cCCCCceEEEeecchhhhhcCCccccccc
Q 017417 220 TRNLTTDFVRLDQDILS--PLAGKKQLYTYETMDFWEQIKTPGMSLKC 265 (372)
Q Consensus 220 ~~~~~~~~~~~~~d~l~--~~~~~~~v~~~~~~~~w~~i~t~~d~~~a 265 (372)
. .....|..+....++ .+.+..++++++.+++|.|+|||++|.++
T Consensus 219 ~-~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~ 265 (337)
T 2cu2_A 219 A-SLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERV 265 (337)
T ss_dssp C-CHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHH
T ss_pred C-cHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHH
Confidence 0 000001111011111 12344689999999999999999987774
No 23
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.92 E-value=1.5e-25 Score=201.65 Aligned_cols=219 Identities=15% Similarity=0.184 Sum_probs=151.0
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
++|.+|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. |+|++.+..+++..+.. .+++.+.
T Consensus 24 ~~~~aiIlAaG--~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~----~~~~~iv 97 (254)
T 1jyk_A 24 IRVKAIILAAG--LGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKE----KYGVRLV 97 (254)
T ss_dssp CCCEEEEEECS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHH----HHCCEEE
T ss_pred cCceEEEECCC--CcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHH----hCCcEEE
Confidence 36899999999 9999999999999999999999999999998765 66666554444544332 2344443
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEEEEecCCccc-ccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTILVIKVSAESA-SQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~v~~~~ 159 (372)
...+....|++++++.++++++ ++++++||+++..+ +.+++ +.+. +++.... ++ ..|+.+ ++.
T Consensus 98 ~~~~~~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~---~~t~~~~--~~~~~~~v~-~d~ 162 (254)
T 1jyk_A 98 FNDKYADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRST---YFSVYRE--DCTNEWFLV-YGD 162 (254)
T ss_dssp ECTTTTTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEE---EEECEES--SCSSCCEEE-ECT
T ss_pred ECCCccCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCc---eEEEEcc--cCCCCeEEE-ECC
Confidence 3333345799999999888773 28899999998544 33332 2222 2222221 22 356644 665
Q ss_pred CCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCC
Q 017417 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (372)
Q Consensus 160 ~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~ 239 (372)
+|+|..+.|++. ..++++|+|+|+++.++.|.+....... +....+++ ++|++..+.
T Consensus 163 -~g~v~~~~e~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~~~-----------------~~~~~e~~--~~d~~~~l~ 219 (254)
T 1jyk_A 163 -DYKVQDIIVDSK---AGRILSGVSFWDAPTAEKIVSFIDKAYV-----------------SGEFVDLY--WDNMVKDNI 219 (254)
T ss_dssp -TCBEEEEECCCS---SEEBCCSEEEECHHHHHHHHHHHHHHHT-----------------TTCCTTCC--TTHHHHTTG
T ss_pred -CCeEEEEEECCC---CCcEEEEEEEEcHHHHHHHHHHHHHHHh-----------------cCCccccC--HHHHHHHHH
Confidence 689999999753 4689999999998766655543221100 00012222 266776677
Q ss_pred CCceEEEeecc-hhhhhcCCccccccchHHH
Q 017417 240 GKKQLYTYETM-DFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 240 ~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~ 269 (372)
...+++++.++ ++|.+|+||+||.+++..+
T Consensus 220 ~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l 250 (254)
T 1jyk_A 220 KELDVYVEELEGNSIYEIDSVQDYRKLEEIL 250 (254)
T ss_dssp GGCCEEEEECCTTSEEECCSHHHHHHHHHHH
T ss_pred hhCCeEEEEecCCeEEEcCCHHHHHHHHHHh
Confidence 77889999888 7999999999999987755
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.91 E-value=6e-24 Score=190.55 Aligned_cols=220 Identities=12% Similarity=0.111 Sum_probs=156.8
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+++.+|||||| .|+|| | ||+|+|++|||||+|+++.+.. |+|++. .+.+.+++.. ++.++.
T Consensus 8 M~~~aIIlA~G--~stRl-~-----~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~----~g~~v~ 73 (256)
T 3tqd_A 8 MEFRVIIPARF--DSTRL-P-----GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED----FGAVVC 73 (256)
T ss_dssp -CCEEEEECCC--C---C-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEE
T ss_pred CCceEEEEcCC--CCCCC-C-----CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCCeEE
Confidence 46899999999 99999 4 8999999999999999999865 666664 3567777654 356666
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhc-CCceEEEEEecCC----cccccceE
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNY-GGMGTILVIKVSA----ESASQFGE 154 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~-~~~~~i~~~~~~~----~~~~~~~~ 154 (372)
+..++...|+.. +..+++.+...+.+.++++.||.++ ...+.++++.+.+. ++++++++.++.. .++..++
T Consensus 74 ~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vk- 151 (256)
T 3tqd_A 74 MTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTK- 151 (256)
T ss_dssp ECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCE-
T ss_pred EeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccE-
Confidence 666666677765 7788888742223689999999987 55799999998774 4567777777642 2334444
Q ss_pred EEEcCCCCceeEeeecCCC-c-------------ccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcc
Q 017417 155 LVADPDTNELLHYTEKPET-F-------------VSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSAT 220 (372)
Q Consensus 155 v~~~~~~~~v~~i~ek~~~-~-------------~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (372)
+..|. +|+++.|.++|.. + .+.+..+|+|.|++++|+.+....+...+..+
T Consensus 152 vv~d~-~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e-------------- 216 (256)
T 3tqd_A 152 VVLNR-RNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKME-------------- 216 (256)
T ss_dssp EEECT-TSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHH--------------
T ss_pred EEECC-CCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchh--------------
Confidence 55775 7999999998641 1 25689999999999999998876443221110
Q ss_pred cccccccccccccccccCCCCceEEEeecchh-hhhcCCccccccchH
Q 017417 221 RNLTTDFVRLDQDILSPLAGKKQLYTYETMDF-WEQIKTPGMSLKCSG 267 (372)
Q Consensus 221 ~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~-w~~i~t~~d~~~a~~ 267 (372)
. -+.|..+..+.+|+++..+++ |.+|+||+||.+++.
T Consensus 217 --------~--leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 217 --------A--LEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp --------T--CTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred --------h--hHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 0 122334566789999999875 899999999988754
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.89 E-value=6.3e-23 Score=184.76 Aligned_cols=221 Identities=15% Similarity=0.129 Sum_probs=159.5
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+++.||||||| .|+|| | +|+|+|++|+|||+|+++++.. |+|++. .+.+.+++.. ++.++.
T Consensus 17 M~~~aIIlA~G--~stRl-p-----~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~----~g~~v~ 82 (264)
T 3k8d_A 17 MSFVVIIPARY--ASTRL-P-----GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEA----AGGEVC 82 (264)
T ss_dssp -CCEEEEECCS--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEE
T ss_pred CceEEEEEcCC--CCCCC-C-----CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCCEEE
Confidence 46899999999 99999 3 5999999999999999999865 666663 3557766654 345666
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCc----ccccceEE
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAE----SASQFGEL 155 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~----~~~~~~~v 155 (372)
+..++...|+.. +..+...+...+.+.++++.||.++ ...+.++++.+.+.++++++++.++... ++..++ +
T Consensus 83 ~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vk-V 160 (264)
T 3k8d_A 83 MTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVK-V 160 (264)
T ss_dssp ECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCE-E
T ss_pred EecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceE-E
Confidence 655666677765 7777777742223689999999977 5679999999988788889998887531 222233 5
Q ss_pred EEcCCCCceeEeeecCCC-c------------ccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccc
Q 017417 156 VADPDTNELLHYTEKPET-F------------VSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (372)
Q Consensus 156 ~~~~~~~~v~~i~ek~~~-~------------~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (372)
..+. +|+++.|.++|.. + ...+.++|+|.|++++++.+....+...+..+
T Consensus 161 v~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e---------------- 223 (264)
T 3k8d_A 161 VLDA-EGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIE---------------- 223 (264)
T ss_dssp EECT-TSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHH----------------
T ss_pred EECC-CCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHH----------------
Confidence 5675 7999999998741 1 24688999999999999988764322111000
Q ss_pred cccccccccccccccCCCCceEEEeec-chhhhhcCCccccccchHH
Q 017417 223 LTTDFVRLDQDILSPLAGKKQLYTYET-MDFWEQIKTPGMSLKCSGL 268 (372)
Q Consensus 223 ~~~~~~~~~~d~l~~~~~~~~v~~~~~-~~~w~~i~t~~d~~~a~~~ 268 (372)
. -+.|..+..+.+|+++.. +.+|.+|+||+|+.+|+..
T Consensus 224 ----~----leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~ 262 (264)
T 3k8d_A 224 ----M----LEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAE 262 (264)
T ss_dssp ----T----CTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHH
T ss_pred ----H----HHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 0 122333456778999855 4578999999999988653
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.87 E-value=6.2e-22 Score=175.71 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=145.7
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCeeEEEe
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~ 83 (372)
++.||||||| .|+||+ ||+|+|++|+|||+|+++++.. |+|++.+ +++.+++.. + .++.+.
T Consensus 2 ~~~aiIlA~G--~g~R~~------~K~l~~i~g~pli~~~l~~~~~~~~~i~v~~~~--~~i~~~~~~----~-~~~~~~ 66 (234)
T 2y6p_A 2 RRAVIIPARL--GSTRLK------EKPLKNLLGKPLIRWVVEGLVKTGERVILATDS--ERVKEVVED----L-CEVFLT 66 (234)
T ss_dssp CEEEEEECCS--CCTTTT------TGGGCEETTEEHHHHHHHHHHTTTSCEEEEESC--HHHHHHHTT----T-SEEEEC
T ss_pred ceEEEEEcCC--CCCCCC------CCcceeECCEEHHHHHHHHHHHhCCEEEEECCh--HHHHHHHHh----c-eEEEEC
Confidence 4789999999 999996 8999999999999999998765 6666654 456677653 2 344444
Q ss_pred cCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-c-CChHHHHHHHHhcCCceEEEEEecC-CcccccceEEEEcCC
Q 017417 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPEMLDAHRNYGGMGTILVIKVS-AESASQFGELVADPD 160 (372)
Q Consensus 84 ~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~-~~l~~~l~~~~~~~~~~~i~~~~~~-~~~~~~~~~v~~~~~ 160 (372)
.++...|++.++ .+++.++ .+.+++++||.++ + .++.++++.|.+.++.++++..... ..++..++ +..+.
T Consensus 67 ~~~~~~g~~~~~-~~~~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 140 (234)
T 2y6p_A 67 PSDLPSGSDRVL-YVVRDLD---VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVK-VVLDR- 140 (234)
T ss_dssp CTTCCSHHHHHH-HHHTTCC---CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCE-EEECT-
T ss_pred CcccccchHHHH-HHHHhCC---CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceE-EEEcC-
Confidence 344456676655 4555543 2689999999965 4 6799999998876643444443211 11233333 33454
Q ss_pred CCceeEeeecCCC-cc-----cCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 161 TNELLHYTEKPET-FV-----SDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 161 ~~~v~~i~ek~~~-~~-----~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
+|+|..+.+++.. .. ..+.++|+|+|+++.|..+.+......+ ..++. . .
T Consensus 141 ~g~v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~--------------------~~d~~---~-~ 196 (234)
T 2y6p_A 141 EGYALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLE--------------------QIEGL---E-Q 196 (234)
T ss_dssp TSBEEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHH--------------------HHHTC---T-H
T ss_pred CCCEeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccc--------------------hhhHH---H-H
Confidence 6899999988632 11 3578999999999988776543211000 00110 1 1
Q ss_pred cccCCCCceEEEeecchhhhhcCCccccccchHH
Q 017417 235 LSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGL 268 (372)
Q Consensus 235 l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~ 268 (372)
+..+..+.+++++..+++|.+|+||+||..|+..
T Consensus 197 ~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~ 230 (234)
T 2y6p_A 197 LRLLENGIKIKVLITENYYHGVDTEEDLKIVEEK 230 (234)
T ss_dssp HHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHH
T ss_pred HHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHH
Confidence 2223346789999999999999999999988654
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.87 E-value=1.8e-21 Score=174.16 Aligned_cols=218 Identities=14% Similarity=0.118 Sum_probs=155.6
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhH-hhcce-----EEEEcccchHHHHHHHhhccCCCCeeEEE
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPI-SACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l-~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
..+|||||| .|+||+ +|+|+|++|+|||+|++ +.+.. |+|++. .+.+.+++.. ++.++.+
T Consensus 2 ~~aiIlA~G--~stR~~------~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~----~g~~v~~ 67 (253)
T 4fcu_A 2 KHIVIPARF--SSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATD--DERIAEICRA----EGVDVVL 67 (253)
T ss_dssp EEEEEECCS--CCTTST------TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHT----TTCCEEE
T ss_pred eEEEEEeCC--CCCCCC------CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHH----cCCeEEE
Confidence 479999999 999996 49999999999999999 88765 666664 3456666643 3455655
Q ss_pred ecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcC-CceEEEEEecC----CcccccceEE
Q 017417 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYG-GMGTILVIKVS----AESASQFGEL 155 (372)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~-~~~~i~~~~~~----~~~~~~~~~v 155 (372)
..++...|+ +++..++..+...+.+.+++++||.++ ...+.++++.+.+.+ ..++.++.+.. ..+|..+ .+
T Consensus 68 ~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~-kv 145 (253)
T 4fcu_A 68 TSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIV-KV 145 (253)
T ss_dssp CCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSC-EE
T ss_pred eCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCcc-EE
Confidence 555555566 578888888863223689999999987 457999999988763 34444444432 1345554 45
Q ss_pred EEcCCCCceeEeeecCC----C---------cccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccc
Q 017417 156 VADPDTNELLHYTEKPE----T---------FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (372)
Q Consensus 156 ~~~~~~~~v~~i~ek~~----~---------~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (372)
..+. +|+++.|.++|. . +...+.++|+|.|++++|..+....+..
T Consensus 146 v~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~--------------------- 203 (253)
T 4fcu_A 146 VMSK-QNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGK--------------------- 203 (253)
T ss_dssp EECT-TSBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCH---------------------
T ss_pred EECC-CCeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCc---------------------
Confidence 6665 799999998752 1 1245789999999999999887543221
Q ss_pred cccccccccccccc---cCCCCceEEEeecchh-hhhcCCccccccchHHHH
Q 017417 223 LTTDFVRLDQDILS---PLAGKKQLYTYETMDF-WEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 223 ~~~~~~~~~~d~l~---~~~~~~~v~~~~~~~~-w~~i~t~~d~~~a~~~~~ 270 (372)
++. .|.|. .+..+.+|+++..+++ |.+|+||+|+.+|+..+.
T Consensus 204 ----le~--~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~ 249 (253)
T 4fcu_A 204 ----LEK--LESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPV 249 (253)
T ss_dssp ----HHH--HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCG
T ss_pred ----ccc--hhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHH
Confidence 110 23333 3356779999999999 999999999999876543
No 28
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.86 E-value=3.6e-22 Score=177.15 Aligned_cols=209 Identities=15% Similarity=0.206 Sum_probs=127.9
Q ss_pred CCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCeeE
Q 017417 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPV 80 (372)
Q Consensus 5 ~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~i 80 (372)
|++++.+|||||| .|+||+|+ ||+|+|++|+|||+|+++.+.. |+|++ +..+++.+++.. .++..+
T Consensus 15 ~m~~~~~iIlA~G--~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~~~~i~vv~-~~~~~~~~~~~~---~~~~~~ 84 (232)
T 2xme_A 15 RIKLMKAVILAAG--LGTRLGGV----PKPLVRVGGCEIILRTMKLLSPHVSEFIIVA-SRYADDIDAFLK---DKGFNY 84 (232)
T ss_dssp -CCCEEEEEEECC--------CC----CGGGCEETTEEHHHHHHHHHGGGEEEEEEEE-STTHHHHHHHHT---TSCCCE
T ss_pred ccccceEEEECCc--CcCcCCCC----CcEEeEECCEEHHHHHHHHHHHhCCEEEEEe-CChHHHHHHHHH---hcCCcE
Confidence 4457899999999 99999985 9999999999999999998865 66666 445556666532 334456
Q ss_pred EEecCCc-ccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEEEEecCCcccccceEEEEc
Q 017417 81 RYLREDK-PHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTILVIKVSAESASQFGELVAD 158 (372)
Q Consensus 81 ~~~~~~~-~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~ 158 (372)
.++.+.. ..|++++++.+++.++ +++++++||++++.+ ++++++ .. . +++...........++.+..+
T Consensus 85 ~~v~~~~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~~~~~~~~~~~~~v~~~ 154 (232)
T 2xme_A 85 KIVRHDRPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQFIEKAVR----GE-G-VIADREPRFVDIGEATKIRVE 154 (232)
T ss_dssp EEEECSCGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHHHHHHHTT----CC-E-EEEESSCSSSCTTTSCEEEEE
T ss_pred EEEECCCCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHHHHHHHHh----CC-C-cEEEccccccCCCcceEEEEc
Confidence 6665543 3799999999998875 248999999998433 344433 21 1 222211111123445556665
Q ss_pred CCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccC
Q 017417 159 PDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPL 238 (372)
Q Consensus 159 ~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~ 238 (372)
+|++..+.+++. ..+++++|+|++++++|+.+.+...+ +++. ..++++
T Consensus 155 --~g~v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~------------------------g~~~--l~~ll~-- 202 (232)
T 2xme_A 155 --DGRVAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDR------------------------EEIP--LSEIVK-- 202 (232)
T ss_dssp --TTEEEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTS------------------------SCCC--HHHHHH--
T ss_pred --CCEEEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhc------------------------ChhH--HHHHHH--
Confidence 588999988763 35678899999999999987664211 0110 023332
Q ss_pred CCCceEEEeecc-hhhhhcCCccccccchH
Q 017417 239 AGKKQLYTYETM-DFWEQIKTPGMSLKCSG 267 (372)
Q Consensus 239 ~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~ 267 (372)
++++..+.++ ++|.+|+||+||.+++.
T Consensus 203 --~~~v~~~~~~~~~~~dI~tpeDl~~a~~ 230 (232)
T 2xme_A 203 --LARLPVTYVDGELWMDVDTKEDVRRANR 230 (232)
T ss_dssp --HHTCBEEECCSCCEEEEECC--------
T ss_pred --cCCEEEEEECCCCEEeCCCHHHHHHHHh
Confidence 2235555554 68999999999988754
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.86 E-value=4.5e-21 Score=173.17 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=149.9
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
++.+|||||| .|+|| | +|+|+|++|+|||+|+++.+.. |+|++.+ +.+.+++.. ++..+..
T Consensus 2 ~~~aiIlA~G--~g~R~-~-----~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~~~ 67 (262)
T 1vic_A 2 SFTVIIPARF--ASSRL-P-----GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKS----FGAEVCM 67 (262)
T ss_dssp CCEEEEECCC--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH----TTCEEEE
T ss_pred CcEEEEEcCC--CCCCC-C-----CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh----cCCEEEE
Confidence 4789999999 99999 4 4999999999999999998765 6666653 346666654 2344432
Q ss_pred ecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCc-c--cccceEEEE
Q 017417 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAE-S--ASQFGELVA 157 (372)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~-~--~~~~~~v~~ 157 (372)
..+....|++ ++..+...+.....+.+++++||.++ ..++.++++.+.+.++++++++.+.... . ...+..+..
T Consensus 68 ~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (262)
T 1vic_A 68 TSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLT 146 (262)
T ss_dssp CCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEE
T ss_pred CCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEE
Confidence 2223445554 55566666643223679999999976 4579999999888777888877776421 0 123344444
Q ss_pred cCCCCceeEeeecC-----------------CCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcc
Q 017417 158 DPDTNELLHYTEKP-----------------ETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSAT 220 (372)
Q Consensus 158 ~~~~~~v~~i~ek~-----------------~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (372)
+. +|++..|.+++ ..+.....++|+|+++++++..+....+...+..+
T Consensus 147 ~~-~g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e-------------- 211 (262)
T 1vic_A 147 DK-DGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLE-------------- 211 (262)
T ss_dssp CT-TSBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHH--------------
T ss_pred CC-CCCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhhhh--------------
Confidence 54 68888887754 12223578999999999988776443221111000
Q ss_pred cccccccccccccccccCCCCceEEEeecc-hhhhhcCCccccccchHHHH
Q 017417 221 RNLTTDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 221 ~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~~ 270 (372)
+ + ++ +..+..+.+++.+..+ ++|.+|+||+||..|+..+.
T Consensus 212 ------~--~-~~-~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~ 252 (262)
T 1vic_A 212 ------K--L-EQ-LRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILA 252 (262)
T ss_dssp ------T--C-TT-HHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHH
T ss_pred ------h--H-HH-HHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHH
Confidence 0 0 11 1122245689999998 89999999999999887664
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.85 E-value=1.1e-20 Score=168.74 Aligned_cols=217 Identities=19% Similarity=0.238 Sum_probs=147.3
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
++.+|||||| .|+|| | ||+|+|++|+|||+|+++.+.. |+|++.+ +.+.+++... +.++.
T Consensus 2 ~~~aiIlA~G--~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~----~~~~~ 67 (245)
T 1h7e_A 2 KAVIVIPARY--GSSRL-P-----GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF----GGKAI 67 (245)
T ss_dssp CEEEEEECCS--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT----TCEEE
T ss_pred CeEEEEEcCC--cCCCC-C-----CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc----CCeEE
Confidence 5899999999 99999 5 9999999999999999998754 6666654 4566666542 34443
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhc-CCceEEEEEecCCc---ccccceEE
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNY-GGMGTILVIKVSAE---SASQFGEL 155 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~-~~~~~i~~~~~~~~---~~~~~~~v 155 (372)
...++...|+++ +..+...++ .+.+++++||.++ ..++.++++.+.+. ++++++++.+.... ++... .+
T Consensus 68 ~~~~~~~~g~~~-~~~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 142 (245)
T 1h7e_A 68 MTRNDHESGTDR-LVEVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTV-KV 142 (245)
T ss_dssp ECCSCCSSHHHH-HHHHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSC-EE
T ss_pred eCCCccCCcHHH-HHHHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCc-EE
Confidence 332344456644 445555553 2679999999986 45699999998887 67777777665111 11111 22
Q ss_pred EEcCCCCceeEeeecCCC-c-----ccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhccccccccccc
Q 017417 156 VADPDTNELLHYTEKPET-F-----VSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVR 229 (372)
Q Consensus 156 ~~~~~~~~v~~i~ek~~~-~-----~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (372)
..+. +|++..|.+++.. . ...+.++|+|+|++..+..+.+... .+++.
T Consensus 143 ~~~~-~g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~~~-------------------------~~~~~ 196 (245)
T 1h7e_A 143 VVNT-RQDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLPE-------------------------SMPEQ 196 (245)
T ss_dssp EECT-TCBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSCC-------------------------CHHHH
T ss_pred EECC-CCcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhCCC-------------------------Ccccc
Confidence 2243 6888888876421 1 1256799999999987765442210 11110
Q ss_pred ccccccccC---CCCceEEEeecchhhhhcCCccccccchHHHHh
Q 017417 230 LDQDILSPL---AGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (372)
Q Consensus 230 ~~~d~l~~~---~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~ 271 (372)
.|.++.+ ..+.+++.+..+++|.+|+||+||..|+..+..
T Consensus 197 --td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 197 --AESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp --HHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHH
T ss_pred --chhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 3444432 345789999999999999999999998876643
No 31
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.80 E-value=4.1e-19 Score=156.92 Aligned_cols=203 Identities=14% Similarity=0.056 Sum_probs=136.3
Q ss_pred CCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCe
Q 017417 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRI 78 (372)
Q Consensus 5 ~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~ 78 (372)
|++++.+|||||| .|+||+ ||+|+|++|+|||+|+++.+.. |+|++.. +.+.+++.. ++.
T Consensus 1 m~m~~~aiIlA~G--~g~R~~------~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~ 66 (228)
T 1ezi_A 1 MEKQNIAVILARQ--NSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN----FGV 66 (228)
T ss_dssp CCCEEEEEEECCS--SCSSST------TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH----TTC
T ss_pred CCCceEEEEecCC--CCCCCC------CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH----cCC
Confidence 3456789999999 999997 8999999999999999998753 6666643 345555543 234
Q ss_pred eEEEecCC----cccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccc
Q 017417 79 PVRYLRED----KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQF 152 (372)
Q Consensus 79 ~i~~~~~~----~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 152 (372)
++ +..+. ...|+.++++.+++.+.. ..+.+++++||.++ ..++.++++.+.+.++++++.+.+... .| +
T Consensus 67 ~~-~~~~~~~~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-~p--~ 141 (228)
T 1ezi_A 67 EV-VLRPAELASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEH-HP--L 141 (228)
T ss_dssp EE-EECCC------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSS-CT--T
T ss_pred EE-EeCchHHcCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCC-Cc--c
Confidence 44 22221 345778999999998842 23579999999986 456899998877766677887777532 12 3
Q ss_pred eEEEEcCCCCceeEeee-c---CC--C-cccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhccccccc
Q 017417 153 GELVADPDTNELLHYTE-K---PE--T-FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTT 225 (372)
Q Consensus 153 ~~v~~~~~~~~v~~i~e-k---~~--~-~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (372)
+...++. +|++..+.+ + +. . ......++|+|++++..+....+
T Consensus 142 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~----------------------------- 191 (228)
T 1ezi_A 142 KTLLQIN-NGEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANNC----------------------------- 191 (228)
T ss_dssp SCEEECC---CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHTS-----------------------------
T ss_pred eeeEEcC-CCcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCCc-----------------------------
Confidence 3333353 578888766 2 11 1 11234578999999876643211
Q ss_pred ccccccccccccCCCCceEEEeecc-hhhhhcCCccccccchHHH
Q 017417 226 DFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 226 ~~~~~~~d~l~~~~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~ 269 (372)
.+ ..++..+..+ ++|.+|+||+||..|+..+
T Consensus 192 --------~~-----g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l 223 (228)
T 1ezi_A 192 --------FF-----IAPTKLYIMSHQDSIDIDTELDLQQAENIL 223 (228)
T ss_dssp --------SC-----CSSCEEEECCTGGGCCCCSHHHHHHHHHHH
T ss_pred --------cc-----CCceEEEEeCcccccCCCCHHHHHHHHHHH
Confidence 00 2455556655 6899999999998886654
No 32
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.79 E-value=4.4e-18 Score=163.66 Aligned_cols=181 Identities=15% Similarity=0.188 Sum_probs=135.2
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccC-CcchhhhhHhhcce-----------EEEEcccchHHHHHHHhhccC
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR-----------IYLVGFYEEREFALYVSSISN 74 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~-g~pli~~~l~~l~~-----------i~vv~~~~~~~i~~~~~~~~~ 74 (372)
.++.+|||||| .||||+. +.||+|+|+. |+|+|+++++++.. ++++..+..+.+.+|+++. .
T Consensus 78 ~k~~vviLAGG--lGTRLg~---~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~-~ 151 (469)
T 2icy_A 78 DKLVVLKLNGG--LGTTMGC---TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY-T 151 (469)
T ss_dssp TTEEEEEEECC--BSGGGTC---CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG-T
T ss_pred ccceEEEEcCC--ccccCCC---CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc-c
Confidence 47899999999 9999964 8899999999 99999999988643 4455555577899999874 5
Q ss_pred CCCeeEEEecC------------------------CcccChHHHHHHH-----HHHhhccCCCeEEEEcCCeeecCChHH
Q 017417 75 ELRIPVRYLRE------------------------DKPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCCSFPLPE 125 (372)
Q Consensus 75 ~~~~~i~~~~~------------------------~~~~g~~~al~~~-----~~~l~~~~~~~vlv~~gD~i~~~~l~~ 125 (372)
.+++++.+..| ..+.|+++.+... ++.+.....++++|+++|.+.......
T Consensus 152 ~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ 231 (469)
T 2icy_A 152 NSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLT 231 (469)
T ss_dssp TSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHH
T ss_pred cCCceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHH
Confidence 67778876533 2568888888754 333332223689999999987654447
Q ss_pred HHHHHHhcCCceEEEEEecCCccc-ccceEEEEcCCCCc--eeEeeecCCC--------cccCceeeeEEEeCHhhHHHh
Q 017417 126 MLDAHRNYGGMGTILVIKVSAESA-SQFGELVADPDTNE--LLHYTEKPET--------FVSDLINCGVYVFTPDIFNAI 194 (372)
Q Consensus 126 ~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~v~~~~~~~~--v~~i~ek~~~--------~~~~~~~~Giy~~~~~~~~~l 194 (372)
++..|.+.++++++.+.+.. .+ ..+|.+... +|+ +.++.|+|.. ...++.++|+|+|++++++.+
T Consensus 232 ll~~~~~~~a~~t~~v~~k~--~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i 307 (469)
T 2icy_A 232 ILKHLIQNKNEYCMEVTPKT--LADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKL 307 (469)
T ss_dssp HHHHHHHHTCSEEEEEEECC--TTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHH
T ss_pred HHHHHHHcCCCeeEEEEEec--cCCCceeEEEEE--CCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHH
Confidence 88999999999999888763 34 468877653 344 5666666643 234678999999999999987
Q ss_pred hhc
Q 017417 195 QGV 197 (372)
Q Consensus 195 ~~~ 197 (372)
.+.
T Consensus 308 ~~~ 310 (469)
T 2icy_A 308 VEA 310 (469)
T ss_dssp HHT
T ss_pred Hhc
Confidence 653
No 33
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.77 E-value=1.7e-18 Score=153.55 Aligned_cols=215 Identities=15% Similarity=0.090 Sum_probs=127.3
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccch-HHHHHHHhhccCCCCeeEE
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPVR 81 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~-~~i~~~~~~~~~~~~~~i~ 81 (372)
+.+|||||| .|+||++ ..+||+|+|++|+|||+|+++++.. |+|++.+.. +.+.+++....-.+...+.
T Consensus 3 ~~~iIlA~G--~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGG--TGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERII 78 (236)
T ss_dssp EEEEEEEC---------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEE
T ss_pred eEEEEeCCc--cccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceE
Confidence 789999999 9999998 6789999999999999999998753 677666554 4566665542211111222
Q ss_pred EecCCcccChHHHHHHHHHHhhc--c--CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEE
Q 017417 82 YLREDKPHGSAGALYNFRDLIME--D--NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGEL 155 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~--~--~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v 155 (372)
... ...|..++++.++..+.. . ..+.+++++||+++ ..++.++++.+.+.++ .+++.+.. ++ +
T Consensus 79 ~~~--~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~~~--~~-----~ 147 (236)
T 2vsh_A 79 ITK--GGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVEAV--DT-----I 147 (236)
T ss_dssp EEE--CCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEECC--SC-----E
T ss_pred EEC--CCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEecc--cc-----E
Confidence 222 225788999999988842 1 12579999999965 4579999999877654 34444442 22 2
Q ss_pred EEcCCCC-ceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 156 VADPDTN-ELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 156 ~~~~~~~-~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
..+. +| ++..+.+++.. ......|+|+++.+..+.+..... . ++.+ .+.
T Consensus 148 ~~~~-~g~~~~~~~~~~~~----~~~~~p~~f~~~~l~~~~~~~~~~---g---------------------~~~~-~~~ 197 (236)
T 2vsh_A 148 VEST-NGQFITDIPNRAHL----YQGQTPQTFRCKDFMDLYGSLSDE---E---------------------KEIL-TDA 197 (236)
T ss_dssp EECS-SSSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTCCHH---H---------------------HHHC-CSH
T ss_pred EEeC-CCCeeeeecChHHh----eeecCCcEecHHHHHHHHHHHHhc---C---------------------CCcC-CCH
Confidence 2232 57 78777776421 111237889987766443321100 0 0000 121
Q ss_pred cccCC-CCceEEEeecchhhhhcCCccccccchHH
Q 017417 235 LSPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGL 268 (372)
Q Consensus 235 l~~~~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~ 268 (372)
++.+. ...++..+..+++|.+|+||+||.+++..
T Consensus 198 ~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~ 232 (236)
T 2vsh_A 198 CKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSM 232 (236)
T ss_dssp HHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHH
Confidence 11111 23578888888899999999999887654
No 34
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.76 E-value=8.2e-20 Score=161.89 Aligned_cols=217 Identities=12% Similarity=0.089 Sum_probs=135.3
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCeeEEEe
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~ 83 (372)
+|.+|||||| . +||++.+...||+|+|++|+|||+|+++.+.. |+|+++. +.+.+++ ++ .+
T Consensus 2 ~~~~vIlAaG--~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~~ivvv~~~--~~i~~~~-------~~--~~- 66 (232)
T 2dpw_A 2 RPSAIVLAGG--K-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGLSPVYVGEN--PGLVPAP-------AL--TL- 66 (232)
T ss_dssp CCEEEEECCC--B-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTCEEEEESCC--SSCSSCC-------SE--EE-
T ss_pred ceeEEEECCC--C-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCCEEEEEeCh--HHHhhhc-------Ce--Ee-
Confidence 4789999999 8 77776555579999999999999999998865 6666654 2222111 23 33
Q ss_pred cCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCCC
Q 017417 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDT 161 (372)
Q Consensus 84 ~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~ 161 (372)
....|++++++.+++.++ +++++++||+++ ..++.++++ + +.++++++...+... ....|+.+ .
T Consensus 67 --~~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~-~~~~~~~~-----~ 132 (232)
T 2dpw_A 67 --PDRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEA-VEARFPRT-----K 132 (232)
T ss_dssp --CCCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHH-HHHHCTTC-----C
T ss_pred --cCCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccc-hhhhCCCc-----c
Confidence 346899999999999875 469999999975 556889988 6 555677777665321 11233321 1
Q ss_pred CceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccch--hhhhhccchhhhhhh-cccccccccccccccccccC
Q 017417 162 NELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKD--RENLRRVSSFEALQS-ATRNLTTDFVRLDQDILSPL 238 (372)
Q Consensus 162 ~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~l~~~ 238 (372)
.++..+.||+ .+++|+|+|++..+..+.+......+ .... .++..-... ..+...++++. +++++.+
T Consensus 133 ~~v~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~--~~~~~~~~~~l~~~~~ge~~l--~~~~~~~ 202 (232)
T 2dpw_A 133 RTYARLREGT------FTGGNLLLLDKSLFRKALPLARRVVALRKRPL--ALARLVGWDVLLKLLLGRLSL--AEVEARA 202 (232)
T ss_dssp CCCEEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHH--HHHHHHCHHHHHHHHHTCCCH--HHHHHHH
T ss_pred eeEEEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHH--HHHHHHCHHHHHHHHhccCCH--HHHHHHH
Confidence 3466777764 38899999999988776553222100 0000 000000000 00000122321 4555443
Q ss_pred CC--CceEEEeec--chhhhhcCCccccc
Q 017417 239 AG--KKQLYTYET--MDFWEQIKTPGMSL 263 (372)
Q Consensus 239 ~~--~~~v~~~~~--~~~w~~i~t~~d~~ 263 (372)
.. +.++..+.. .+.|.+|+||+||.
T Consensus 203 ~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 203 QRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 32 256777776 57899999999874
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.75 E-value=4.7e-18 Score=151.84 Aligned_cols=218 Identities=15% Similarity=0.139 Sum_probs=136.6
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchH-HHHHHHhhccCCCCeeE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEER-EFALYVSSISNELRIPV 80 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~-~i~~~~~~~~~~~~~~i 80 (372)
++.+|||||| .|+||++ .++||+|+|++|+|||+|+++++.. |+|++..... .+.+.+..+... ..+
T Consensus 3 ~~~aIIlAaG--~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~--~~~ 76 (246)
T 3f1c_A 3 LIYAQILAGG--KGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISD--DRI 76 (246)
T ss_dssp CEEEEEECC-------C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCC--TTE
T ss_pred ccEEEEECCc--cccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCC--CCE
Confidence 5789999999 9999987 5789999999999999999998743 6666554332 344444443211 224
Q ss_pred EEecCCcccChHHHHHHHHHHhhc----cCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceE
Q 017417 81 RYLREDKPHGSAGALYNFRDLIME----DNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGE 154 (372)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~l~~----~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 154 (372)
.++.. ..+..++++++++.+.. ...+.+++++||.++ ...+.++++.+.+.++ .+.+.+... ..
T Consensus 77 ~~~~~--~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a--~i~~~~~~d------~i 146 (246)
T 3f1c_A 77 VVIEG--GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA--VDTVIEALD------TI 146 (246)
T ss_dssp EEEEC--CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE--EEEEEECSS------CE
T ss_pred EEECC--CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEeccc------eE
Confidence 44432 24678999999999865 123689999999987 4569999999987653 444455421 23
Q ss_pred EEEcCCCCceeEeeecCCCcccCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhccccccccccccccc
Q 017417 155 LVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQD 233 (372)
Q Consensus 155 v~~~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (372)
+..+ +++.+..+.+++. .+..-..+.|+...+ +.+...... + .++ .+|
T Consensus 147 ~~~~-~~~~v~~~~~r~~----l~~~qtpq~f~~~~L~~a~~~~~~~--~----------------------~~~--~TD 195 (246)
T 3f1c_A 147 VESS-NHEVITDIPVRDH----MYQGQTPQSFNMKKVFNHYQNLTPE--K----------------------KQI--LTD 195 (246)
T ss_dssp EECS-SSSBCCBCCCGGG----EEEEEEEEEEEHHHHHHHHHTSCHH--H----------------------HHH--CCC
T ss_pred EEec-CCCeEEEecChHH----hhhhcCCceeEHHHHHHHHHHHHHc--C----------------------CCc--cCc
Confidence 3333 3466766666642 112224568885544 444433111 0 011 034
Q ss_pred ccccCC-CCceEEEeecchhhhhcCCccccccchHHHHhh
Q 017417 234 ILSPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLYLAQ 272 (372)
Q Consensus 234 ~l~~~~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~~~ 272 (372)
....+. .+.+|..++.+.+|.+|++|+|+..|+.++..+
T Consensus 196 ~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~ 235 (246)
T 3f1c_A 196 ACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQER 235 (246)
T ss_dssp HHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhcc
Confidence 333332 346899999999999999999999998876543
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.74 E-value=1.3e-17 Score=147.38 Aligned_cols=211 Identities=17% Similarity=0.199 Sum_probs=122.6
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCeeE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPV 80 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~~i 80 (372)
+++.+|||||| .|+||++ ..||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+ +..... ..+
T Consensus 5 ~~~~aiIlA~G--~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~---~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAG--IGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP---QVR 75 (231)
T ss_dssp CCEEEEEECC---------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT---TSE
T ss_pred CceEEEEEccc--ccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC---Cce
Confidence 56899999999 9999997 689999999999999999998753 77776654444555 443211 124
Q ss_pred EEecCCcccChHHHHHHHHHHhhcc----CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceE
Q 017417 81 RYLREDKPHGSAGALYNFRDLIMED----NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGE 154 (372)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~l~~~----~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 154 (372)
.++ ....|++++++.++..+... ..+.+++++||.++ ...+.++++.+.+.+. ..+++.+.. +.
T Consensus 76 ~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~-~~~~~~~~~--~~----- 145 (231)
T 1vgw_A 76 VWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAE-GGILAVPVA--DT----- 145 (231)
T ss_dssp EEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTT-CEEEEEECC--SC-----
T ss_pred EEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCC-eEEEEeecc--cc-----
Confidence 444 23478999999999887421 23679999999986 3458999988866542 234444432 11
Q ss_pred EEEcCCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccc
Q 017417 155 LVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (372)
Q Consensus 155 v~~~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (372)
+.... +|++....++. ..+.....|+|+++.+..+.+...... . .+. ..+
T Consensus 146 ~~~~~-~g~i~~~~~~~----~~~~~~~p~~f~~~~l~~~~~~~~~~g---~------------------~~~----~~~ 195 (231)
T 1vgw_A 146 LKRAE-SGQISATVDRS----GLWQAQTPQLFQAGLLHRALAAENLGG---I------------------TDE----ASA 195 (231)
T ss_dssp EEEES-SSBEEEEECCT----TEEEEEEEEEEEHHHHHHHHHC----C---C------------------CSH----HHH
T ss_pred eEEeC-CCceEecCChH----HheeeeCCcEecHHHHHHHHHHHhhcC---C------------------CcH----HHH
Confidence 11122 35554332221 111122488899877765443211100 0 000 112
Q ss_pred cccCCCCceEEEeecchhhhhcCCccccccchHH
Q 017417 235 LSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGL 268 (372)
Q Consensus 235 l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~ 268 (372)
+..+ ..++..+..++.|.+|+||+||.+++..
T Consensus 196 ~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~ 227 (231)
T 1vgw_A 196 VEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLL 227 (231)
T ss_dssp HHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred HHHc--CCCEEEEECCccccCcCCHHHHHHHHHH
Confidence 2221 2567777777899999999999887554
No 37
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.7e-16 Score=153.52 Aligned_cols=180 Identities=16% Similarity=0.231 Sum_probs=131.0
Q ss_pred CCCeeEEEEeCCCCCCCccccCcccCCCCCcccC-CcchhhhhHhhcce----------EEE-EcccchHHHHHHHhhcc
Q 017417 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR----------IYL-VGFYEEREFALYVSSIS 73 (372)
Q Consensus 6 ~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~-g~pli~~~l~~l~~----------i~v-v~~~~~~~i~~~~~~~~ 73 (372)
..++.+|||||| .||||+. +.||+|+||+ |+|||+|+++++.. ++| ++.+..+.+.+++++.
T Consensus 90 ~~k~avViLAGG--~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~- 163 (488)
T 2i5k_A 90 LSKLAVLKLNGG--LGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKY- 163 (488)
T ss_dssp GGGEEEEEECCC--BSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGG-
T ss_pred cCCceEEEEcCC--CcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhc-
Confidence 357889999999 9999986 8899999999 99999999988643 334 4446677889999873
Q ss_pred CCCCeeEEEecCC------------------------cccChHHHHHHH-----HHHhhccCCCeEEEEcCCeeec-CCh
Q 017417 74 NELRIPVRYLRED------------------------KPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCCS-FPL 123 (372)
Q Consensus 74 ~~~~~~i~~~~~~------------------------~~~g~~~al~~~-----~~~l~~~~~~~vlv~~gD~i~~-~~l 123 (372)
..++..+.++.|. .+.|+++++... ++.+.....++++|++||++.. .++
T Consensus 164 ~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~ 243 (488)
T 2i5k_A 164 SANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDL 243 (488)
T ss_dssp CSSSCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCH
T ss_pred cccCceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccH
Confidence 4567777777655 678999988743 4555322236899999999664 567
Q ss_pred HHHHHHHHhcCCceEEEEEecCCcccc-cceEEEEcCCCCc--eeEeeecCCC--------cccCceeeeEEEeCHhhHH
Q 017417 124 PEMLDAHRNYGGMGTILVIKVSAESAS-QFGELVADPDTNE--LLHYTEKPET--------FVSDLINCGVYVFTPDIFN 192 (372)
Q Consensus 124 ~~~l~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~~~~~~~~--v~~i~ek~~~--------~~~~~~~~Giy~~~~~~~~ 192 (372)
. ++..|.+.++++++.+.+. .++. .||.+..+ +|+ +.++.+.+.. ......|+|+|+|+.+++.
T Consensus 244 ~-~L~~~~~~~a~~t~~v~~~--~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~ 318 (488)
T 2i5k_A 244 K-ILNHMIETGAEYIMELTDK--TRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVK 318 (488)
T ss_dssp H-HHHHHHHSCCSEEEEEEEC--CGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHH
T ss_pred H-HHHHHHhcCCcEEEEEEEe--cCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHH
Confidence 5 6688888889899988765 3454 48877664 355 3333333321 1246789999999988777
Q ss_pred Hhhh
Q 017417 193 AIQG 196 (372)
Q Consensus 193 ~l~~ 196 (372)
.+.+
T Consensus 319 ~~l~ 322 (488)
T 2i5k_A 319 RLIE 322 (488)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6544
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.73 E-value=1.2e-17 Score=147.39 Aligned_cols=214 Identities=16% Similarity=0.193 Sum_probs=129.9
Q ss_pred CCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCe
Q 017417 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRI 78 (372)
Q Consensus 5 ~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~ 78 (372)
|++++.+|||||| .|+||+. .+||+|+|++|+|||+|+++.+.. |+|++.+....+..++. ..++.
T Consensus 1 m~~~~~aiIlAaG--~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~---~~~~~ 72 (228)
T 2yc3_A 1 MEKSVSVILLAGG--QGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE---ESIDV 72 (228)
T ss_dssp CTTCEEEEEECCC--CC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTT---TTSSS
T ss_pred CCcceEEEEECCc--cccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHH---HhCCC
Confidence 4567899999999 9999984 679999999999999999998753 77777665544544443 23344
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEE
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELV 156 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 156 (372)
.+.++.. ..|..++++.+++.+.. ..+.+++++||.++ ..++.++++.+.+.+ .++++.+... . ...
T Consensus 73 ~v~~~~~--~~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~--~----~~~ 141 (228)
T 2yc3_A 73 DLSFAIP--GKERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVG--AAVLGVPAKA--T----IKE 141 (228)
T ss_dssp EEEEECC--CSSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHS--EEEEEEECCS--C----CCC
T ss_pred cEEEECC--CCCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcC--ceEEEEeccc--e----EEE
Confidence 5555543 26889999999988854 23679999999876 456899999887654 3444444321 1 111
Q ss_pred EcCCCCceeEeeecCCCcccCceeeeEEEeCHhhH-HHhhhcccccchhhhhhccchhhhhhhccccccccccccccccc
Q 017417 157 ADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDIL 235 (372)
Q Consensus 157 ~~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l 235 (372)
++. ++.+..+.+++ ..+.....|+|+++.+ +.+.+.... .++. .+.+
T Consensus 142 ~~~-~~~v~~~~~~~----~~~~~~~~~~f~~~~l~~~~~~~~~~-------------------------~~~~--~~~~ 189 (228)
T 2yc3_A 142 VNS-DSLVVKTLDRK----TLWEMQTPQVIKPELLKKGFELVKSE-------------------------GLEV--TDDV 189 (228)
T ss_dssp BCT-TSCBCCCCSCC----CCEEEEEEEEECHHHHHHHHHHHHHH-------------------------TCCC--CSTT
T ss_pred EcC-CCceEEecCcc----ceEEEeCCcEEEHHHHHHHHHHHHhc-------------------------CCCc--ccHH
Confidence 232 34554433321 1122234899997544 344332110 0110 2333
Q ss_pred ccCC-CCceEEEeecchhhhhcCCccccccchHHH
Q 017417 236 SPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 236 ~~~~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (372)
+.+. ...++..+..+..|.+|+||+||..++..+
T Consensus 190 ~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 190 SIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 224 (228)
T ss_dssp HHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHH
Confidence 2222 234666666667899999999998886654
No 39
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.73 E-value=2.6e-17 Score=144.61 Aligned_cols=207 Identities=15% Similarity=0.138 Sum_probs=134.5
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccch-HHHHHHHhhccCCCCeeE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPV 80 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~-~~i~~~~~~~~~~~~~~i 80 (372)
++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++.+.. +.+.+++. . ..+
T Consensus 2 ~~~~vIlA~G--~g~R~~~---~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~----~--~~v 70 (223)
T 2xwl_A 2 ATVAVVPAAG--SGERLRA---GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG----G--EDS 70 (223)
T ss_dssp CEEEEEECCC--CCGGGTS---SSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC----B--TTE
T ss_pred ceEEEEECCc--cCcccCC---CCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc----c--CCe
Confidence 4889999999 9999983 679999999999999999998753 666665543 33444432 1 124
Q ss_pred EEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEc
Q 017417 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVAD 158 (372)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~ 158 (372)
.++.+. .+.+++++.+++.+.. .+.+++++||+++ ..++.++++.+. .+.++++++.+.. ++..+ .+
T Consensus 71 ~~~~~~--~~~~~~i~~al~~~~~--~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~--d~~~~----~~ 139 (223)
T 2xwl_A 71 VIVSGG--VDRTESVALALEAAGD--AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPA--DTIKA----VD 139 (223)
T ss_dssp EEEECC--SSHHHHHHHHHTTCTT--CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCS--SCEEE----EC
T ss_pred EEEcCC--CCHHHHHHHHHHhcCC--CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecc--cceEE----Ec
Confidence 444332 4578999999988732 2579999999976 446899998883 2345666666542 22222 24
Q ss_pred CCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccC
Q 017417 159 PDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPL 238 (372)
Q Consensus 159 ~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~ 238 (372)
. +|++..+.+++.. ......|+|++..+..+.+.... ++. .+....+
T Consensus 140 ~-~g~~~~~~e~~~l----~~~~~p~~f~~~~l~~~~~~~~~-------------------------~~~---~~~~~~~ 186 (223)
T 2xwl_A 140 A-NGAVLGTPERAGL----RAVQTPQGFHADVLRRAYARATA-------------------------GGV---TDDASLV 186 (223)
T ss_dssp T-TSBEEECCCGGGE----EEECSCEEEEHHHHHHHHTTCCS-------------------------CCC---CCHHHHH
T ss_pred C-CCcEEeecChHHh----eeeeCCcccCHHHHHHHHHHhhC-------------------------CCC---ccHHHHH
Confidence 3 5788888776421 11123578887766655432100 000 1111111
Q ss_pred C-CCceEEEeecchhhhhcCCccccccchHHH
Q 017417 239 A-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 239 ~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (372)
. ...++..+..+++|.+|+||+||.++...+
T Consensus 187 ~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 187 EQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp HTTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHcCCCEEEEECCcccccccCHHHHHHHHHHH
Confidence 1 135677788888999999999999886654
No 40
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.71 E-value=1.1e-16 Score=141.42 Aligned_cols=201 Identities=13% Similarity=0.085 Sum_probs=128.9
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCeeE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPV 80 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~~i 80 (372)
+++.+|||||| .|+||. +|+|+|++|+|||+|+++.+.. |+|++. .+.+.+++.. ++.++
T Consensus 2 ~~~~aiIlA~G--~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~----~g~~~ 67 (229)
T 1qwj_A 2 PHLAALVLARG--GSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ----FGAQV 67 (229)
T ss_dssp CCEEEEEECCS--CCSSSS------CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH----TTCEE
T ss_pred CcEEEEEEcCC--CCCCCC------CcccceECCEEHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH----cCCEE
Confidence 35889999999 999994 5999999999999999998754 666663 3456666654 24444
Q ss_pred EEecC---CcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEE
Q 017417 81 RYLRE---DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGEL 155 (372)
Q Consensus 81 ~~~~~---~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v 155 (372)
....+ ....+..+++..+++.+.. .+.+++++||.++ ..++.++++.+.+.+++.++.+.+. .+|..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~al~~~~~--~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~--~~p~~~~v- 142 (229)
T 1qwj_A 68 HRRSSETSKDSSTSLDAIVEFLNYHNE--VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRR--HQFRWSEI- 142 (229)
T ss_dssp EECCGGGSSTTCCHHHHHHHHHTTCTT--CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEE--CCCEECCC-
T ss_pred EeChhhhcCCCCcHHHHHHHHHHhcCC--CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeec--cChhHhhc-
Confidence 22221 1223445888888887732 2679999999987 4579999999887777665555433 23444432
Q ss_pred EEcCCCCceeE--eeec------CCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhccccccccc
Q 017417 156 VADPDTNELLH--YTEK------PETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDF 227 (372)
Q Consensus 156 ~~~~~~~~v~~--i~ek------~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (372)
.+ ....+.+ +.++ +..+.....++|+|+++++.| +..
T Consensus 143 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~~~------------------------------- 187 (229)
T 1qwj_A 143 -QK-GVREVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--EMG------------------------------- 187 (229)
T ss_dssp -CS-STTCCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--HTT-------------------------------
T ss_pred -cc-cccccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--ccc-------------------------------
Confidence 12 0001111 1111 111123457999999999887 110
Q ss_pred ccccccccccCCCCceEEEeecc-hhhhhcCCccccccchHHHHh
Q 017417 228 VRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYLA 271 (372)
Q Consensus 228 ~~~~~d~l~~~~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~~~ 271 (372)
+.....+..+..+ ++|.+|+||+||..|+..+..
T Consensus 188 ----------~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 188 ----------YLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------CSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------cccCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 1112234322444 789999999999999877643
No 41
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.70 E-value=5.2e-17 Score=140.00 Aligned_cols=184 Identities=13% Similarity=0.165 Sum_probs=122.4
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+++.+|||||| .|+||++ ||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+++.. +++++.
T Consensus 4 ~~~~~iIlA~G--~~~R~g~-----~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~~~~~ 72 (199)
T 2waw_A 4 SRVTGVVLAAG--YSRRLGT-----PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL----DGLDIV 72 (199)
T ss_dssp CCEEEEEEESS--CCTTTTS-----CGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC----TTSEEE
T ss_pred CceEEEEECCC--CCCCCCC-----CEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc----CCCEEE
Confidence 46899999999 9999974 9999999999999999998754 677766555566666543 244443
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~ 159 (372)
. .+....|++++++.+++.+.. ..+.+++++||.++ ..++.++++. +.++++++... +
T Consensus 73 ~-~~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~---------------~- 132 (199)
T 2waw_A 73 L-VDDAGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY---------------A- 132 (199)
T ss_dssp E-CCCCCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE---------------T-
T ss_pred E-CCCcccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec---------------C-
Confidence 3 233447889999999998841 13689999999987 4568888877 34444432221 0
Q ss_pred CCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCC
Q 017417 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (372)
Q Consensus 160 ~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~ 239 (372)
++- ..-++|+++.+..+.+...... . ..++..+
T Consensus 133 --g~~----------------~~P~~~~~~~l~~~~~~~~~~~------------------------~----~~~l~~~- 165 (199)
T 2waw_A 133 --NGI----------------GHPFWVSRGVFGDLAELHGDKG------------------------V----WRLIESG- 165 (199)
T ss_dssp --TEE----------------EEEEEEEGGGHHHHHTCSSTTC------------------------H----HHHHHSS-
T ss_pred --Ccc----------------cCCEEEcHHHHHHHHhcCCCHH------------------------H----HHHHHhC-
Confidence 110 0114788888887764311100 0 1222221
Q ss_pred CCceEEEeec-chhhhhcCCccccccchHHH
Q 017417 240 GKKQLYTYET-MDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 240 ~~~~v~~~~~-~~~w~~i~t~~d~~~a~~~~ 269 (372)
..++..+.. .+.|.+|+||+||.++...+
T Consensus 166 -~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 166 -RHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp -SSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred -cccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 134666665 46899999999998877654
No 42
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.67 E-value=2.9e-16 Score=135.40 Aligned_cols=113 Identities=14% Similarity=0.141 Sum_probs=82.0
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce--EEEEcccchHHHHHHHhhccCCCCeeEEEecC
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR--IYLVGFYEEREFALYVSSISNELRIPVRYLRE 85 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~--i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~ 85 (372)
++.+|||||| .|+||++ ||+|+|++|+|||+|+++.+.. ++|++....+.+.+++. .++ +.. ..
T Consensus 2 ~~~~iIlAgG--~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~~ivvv~~~~~~~~~~~~~-----~~~-~v~-~~ 67 (197)
T 3d5n_A 2 NIGVIILAAG--EGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDLEKIIIVGKYVNEMLPLLM-----DQI-VIY-NP 67 (197)
T ss_dssp CEEEEEECSC--CTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTSBCCEEECTTHHHHGGGCT-----TSC-EEE-CT
T ss_pred ceEEEEECCc--CcccCCC-----CeeeCEeCceEHHHHHHHHHHhCCEEEEECCCHHHHHHHhc-----CCE-EEE-CC
Confidence 4789999999 9999985 9999999999999999999875 55555544344433332 233 221 22
Q ss_pred CcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCce
Q 017417 86 DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMG 137 (372)
Q Consensus 86 ~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~ 137 (372)
....|++++++.+++.+... +.+++++||.++ ...+.++++.+ +.++++
T Consensus 68 ~~~~G~~~si~~al~~~~~~--~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 68 FWNEGISTSLKLGLRFFKDY--DAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp TGGGCHHHHHHHHHHHTTTS--SEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred CCCCCHHHHHHHHHHhhccC--CcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 33479999999999988642 579999999986 34578888766 444444
No 43
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.65 E-value=1.9e-16 Score=136.34 Aligned_cols=110 Identities=17% Similarity=0.220 Sum_probs=81.0
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
+++.+|||||| .|+||+ .||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+++.. +++++.
T Consensus 4 ~~~~~iIlA~G--~~~R~g-----~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~~~~~ 72 (197)
T 2wee_A 4 TQITGVVLAAG--RSNRLG-----TPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL----DGTDVV 72 (197)
T ss_dssp SEEEEEEEECC--CCTTTS-----SCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC----TTSEEE
T ss_pred CceEEEEECCC--CcccCC-----CCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc----CCCEEE
Confidence 46889999999 999996 49999999999999999998764 666666555566666543 234443
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHH
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDA 129 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~ 129 (372)
. .+....|++++++.+++.+.. ..+.+++++||.++ ...+.++++.
T Consensus 73 ~-~~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 73 V-VEDVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp E-CC----CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred E-CCCcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 3 223346899999999988731 12579999999986 4568888876
No 44
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.64 E-value=6.5e-16 Score=136.99 Aligned_cols=220 Identities=15% Similarity=0.146 Sum_probs=125.6
Q ss_pred CCCCCCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccC
Q 017417 1 MGSSEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISN 74 (372)
Q Consensus 1 ~~~~~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~ 74 (372)
|...| +++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++.+..+.+.. +.....
T Consensus 1 ~~~~~-~~~~~iIlA~G--~g~R~~~---~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~ 73 (236)
T 1i52_A 1 MATTH-LDVCAVVPAAG--FGRRMQT---ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPLANH 73 (236)
T ss_dssp ----C-CCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGGGGC
T ss_pred CCCCC-CceeEEEECCc--CccccCC---CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHhcCC
Confidence 44344 35899999999 9999983 579999999999999999998753 66666543333333 322111
Q ss_pred CCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccc
Q 017417 75 ELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQF 152 (372)
Q Consensus 75 ~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 152 (372)
..+.++.+ ..|..++++.++..+... +.+++++||.++ ...+.++++.+.+.++.. +++.+.. +. .
T Consensus 74 ---~~v~~~~~--~~g~~~~i~~al~~~~~~--~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~--~~--~ 141 (236)
T 1i52_A 74 ---PQITVVDG--GDERADSVLAGLKAAGDA--QWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVR--DT--M 141 (236)
T ss_dssp ---TTEEEEEC--CSSHHHHHHHHHHTSTTC--SEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECC--SC--E
T ss_pred ---CCEEEECC--CCCHHHHHHHHHHhcCCC--CEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecc--cc--E
Confidence 13434432 258899999999887422 679999999986 345888888776544223 3333431 11 1
Q ss_pred eEEEEcCCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccc
Q 017417 153 GELVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQ 232 (372)
Q Consensus 153 ~~v~~~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (372)
..++.+++++....+. ..-+..-+.++|+.+.+..+.+....... . ..+. .
T Consensus 142 --~~~~~~~~~i~~~~~~----~~i~~~~~p~~f~~~~l~~~~~~~~~~g~--~-----------------~td~----~ 192 (236)
T 1i52_A 142 --KRAEPGKNAIAHTVDR----NGLWHALTPQFFPRELLHDCLTRALNEGA--T-----------------ITDE----A 192 (236)
T ss_dssp --EEECTTSSSEEEEECC----TTCEEEEEEEEEEHHHHHHHHHHHHHTTC--C-----------------CCSH----H
T ss_pred --EEEcCCCCceeeccCh----HhheeeeCCceecHHHHHHHHHHHHhcCC--C-----------------cccH----H
Confidence 1123211454433211 11111124556776554433221100000 0 0000 0
Q ss_pred cccccCCCCceEEEeecchhhhhcCCccccccchHHHH
Q 017417 233 DILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 233 d~l~~~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~ 270 (372)
.++..+ ..++..+..++.|.+|+||+||..+...+.
T Consensus 193 ~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~ 228 (236)
T 1i52_A 193 SALEYC--GFHPQLVEGRADNIKVTRPEDLALAEFYLT 228 (236)
T ss_dssp HHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHC
T ss_pred HHHHHc--CCCEEEEecCccccccCCHHHHHHHHHHHH
Confidence 122221 245667777789999999999998876653
No 45
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.64 E-value=3.9e-15 Score=131.73 Aligned_cols=208 Identities=15% Similarity=0.158 Sum_probs=124.3
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHH-HHHHHhhccCCCCee
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEERE-FALYVSSISNELRIP 79 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~-i~~~~~~~~~~~~~~ 79 (372)
..+.||||||| .|+||+. +.||+|+|++|+|||+|+++.+.. |+|++.+.... +.+++. +...
T Consensus 12 ~~~~aiILAaG--~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~-----~~~~ 81 (234)
T 1vpa_A 12 HMNVAILLAAG--KGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF-----HEKV 81 (234)
T ss_dssp CCEEEEEEECC--CCGGGCC---SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC-----CTTE
T ss_pred ccCeEEEEcCc--chhhcCC---CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc-----cCCc
Confidence 57899999999 9999985 679999999999999999998753 66666554332 232221 1222
Q ss_pred EEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEE
Q 017417 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA 157 (372)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~ 157 (372)
+.... ...+..++++.++..+.....+.+++++||.++ ...+.++++.+.+.+ ..+++.+.. +. ...+
T Consensus 82 ~~~~~--gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~~~~--~~----~~~~ 151 (234)
T 1vpa_A 82 LGIVE--GGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLALKNS--DA----LVRV 151 (234)
T ss_dssp EEEEE--CCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEEECC--SE----EEEE
T ss_pred eEEeC--CCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEecC--Cc----EEEE
Confidence 32221 112477889999988853122578999999986 446889998876653 333344432 11 1122
Q ss_pred cCCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhccccccccccccccccccc
Q 017417 158 DPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSP 237 (372)
Q Consensus 158 ~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ 237 (372)
+. .| + .+.++. ..+..-..++|+...+..+.+.. . . ..+- ..++..
T Consensus 152 ~~-~g-v-~~~~r~----~~~~~~~p~~f~~~~l~~~~~~~---~---~-----------------~~~~----~~~~~~ 197 (234)
T 1vpa_A 152 EN-DR-I-EYIPRK----GVYRILTPQAFSYEILKKAHENG---G---E-----------------WADD----TEPVQK 197 (234)
T ss_dssp ET-TE-E-EEECCT----TEEEEEEEEEEEHHHHHHHHTTC---C---C-----------------CSSS----HHHHHT
T ss_pred CC-CC-c-ccCChh----HeeeecCCccccHHHHHHHHHhc---C---C-----------------CCcH----HHHHHH
Confidence 33 45 5 544431 00111123377776665543320 0 0 0000 111221
Q ss_pred CCCCceEEEeecchhhhhcCCccccccchHHHH
Q 017417 238 LAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (372)
Q Consensus 238 ~~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~~ 270 (372)
. ..++..+..++.|.+|+||+||..++..+.
T Consensus 198 ~--g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 198 L--GVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp T--TCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred c--CCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 1 245666666788999999999998877553
No 46
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.60 E-value=7.6e-16 Score=133.18 Aligned_cols=104 Identities=22% Similarity=0.300 Sum_probs=76.4
Q ss_pred CCCCCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCee
Q 017417 4 SEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIP 79 (372)
Q Consensus 4 ~~~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~ 79 (372)
++++++.+|||||| .|+||+ .||+|+|++|+|||+|+++.+.. |+|++.+... +++. +++
T Consensus 10 ~~~~~~~~iILA~G--~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~~~~i~vv~~~~~~---~~~~------~~~ 73 (201)
T 2e8b_A 10 SLSKVNTCYVLAGG--KSKRFG-----EDKLLYEIKGKKVIERVYETAKSVFKEVYIVAKDREK---FSFL------NAP 73 (201)
T ss_dssp TSCSCCEEEEEEES--SCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCSGG---GGGG------TCC
T ss_pred CcccCceEEEECCC--CCccCC-----CCcccceECceEHHHHHHHHHHHhCCEEEEEeCcHHH---hhcC------Cce
Confidence 44556799999999 999997 49999999999999999998765 6666654432 1221 233
Q ss_pred EEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee-c-CChHH-HH
Q 017417 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPE-ML 127 (372)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~-~~l~~-~l 127 (372)
+.. .+....|++++++.+++.++. +.+++++||+++ . ..+.. ++
T Consensus 74 ~v~-~~~~~~g~~~~i~~al~~~~~---~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 74 VVL-DEFEESASIIGLYTALKHAKE---ENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEE-CCCSSCCHHHHHHHHHHHCSS---SEEEEEETTCTTCCHHHHHHHHH
T ss_pred EEe-cCCCCCCcHHHHHHHHHHcCC---CCEEEEeCCcCcCCHHHHHHHHh
Confidence 322 233457999999999998853 579999999987 3 33565 55
No 47
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.59 E-value=7.7e-15 Score=129.31 Aligned_cols=211 Identities=15% Similarity=0.164 Sum_probs=133.3
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccch-HHHHHHHhhccCCCCeeE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPV 80 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~-~~i~~~~~~~~~~~~~~i 80 (372)
++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++.... +.+..++.. .+
T Consensus 7 ~~~aIIlAaG--~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-------~v 74 (231)
T 3q80_A 7 EVVAIVPAAG--SGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-------RA 74 (231)
T ss_dssp CEEEEEECCC--CCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-------GC
T ss_pred ceEEEEECCC--CCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-------Ce
Confidence 5789999999 9999986 789999999999999999998753 666665443 344444432 22
Q ss_pred EEecCCcccChHHHHHHHHHHhhcc-CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEE
Q 017417 81 RYLREDKPHGSAGALYNFRDLIMED-NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA 157 (372)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~l~~~-~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~ 157 (372)
.++... .+..+++++++..+... ..+++++++||.++ ...+.++++.+.+ +.++.+.+.++. ++.. ..
T Consensus 75 ~~v~gg--~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~--dt~~----~~ 145 (231)
T 3q80_A 75 MIVAGG--SNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLS--DTIK----AV 145 (231)
T ss_dssp EEEECC--SSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCS--SCEE----EE
T ss_pred EEEcCC--CchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEecc--CCEE----EE
Confidence 333321 34579999999988642 13689999999998 4568999988765 245666666653 2221 23
Q ss_pred cCCCCceeEeeecCCCcccCceeeeEEEeCHhhHHHh-hhcccccchhhhhhccchhhhhhhcccccccccccccccccc
Q 017417 158 DPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAI-QGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILS 236 (372)
Q Consensus 158 ~~~~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~ 236 (372)
+. +|.|..+.+.. .-..+.| -+.|+...+... .....++ + .++ .+|...
T Consensus 146 ~~-~g~v~~~~~r~---~l~~~qT-Pq~F~~~~L~~a~~~~~~~n-~----------------------~~~--~TD~~~ 195 (231)
T 3q80_A 146 DA-NGVVLGTPERA---GLRAVQT-PQGFTTDLLLRSYQRGSLDL-P----------------------AAE--YTDDAS 195 (231)
T ss_dssp CT-TSBEEECCCGG---GEEEECS-CEEEEHHHHHHHHHHHTC----------------------------C--CSSSHH
T ss_pred cC-CCcEEEecchh---heEEEcC-CcEEEHHHHHHHHHHHHhhc-C----------------------CCC--CCcHHH
Confidence 43 57776665431 1111233 478886555443 3321111 0 011 033333
Q ss_pred cCC-CCceEEEeecchhhhhcCCccccccchHHH
Q 017417 237 PLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 237 ~~~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (372)
.+. ...+|..++-+..++.|.+|+|+..|+.++
T Consensus 196 ~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 196 LVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp HHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 222 246777777777889999999998876654
No 48
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.59 E-value=2.2e-15 Score=133.59 Aligned_cols=202 Identities=13% Similarity=0.150 Sum_probs=116.3
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCeeEEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
+++.+|||||| .|+||++ . ||+|+|++|+|||+|+++. .. |+|++.. . +.+ +.. .+ +.+
T Consensus 24 M~~~aiILAgG--~s~Rm~~---~-~K~l~~i~gkpli~~~l~~-~~~~~~ivvv~~~-~--~~~-~~~----~~--v~~ 86 (236)
T 2px7_A 24 MEVSVLIPAAG--NGLRLGR---G-PKAFLQVGGRTLLEWTLAA-FRDAAEVLVALPP-G--AEP-PKG----LG--AVF 86 (236)
T ss_dssp CCCEEEEECCC------------C-CGGGCBCSSSBHHHHHHHH-TTTCSEEEEEECT-T--CCC-CTT----CS--CEE
T ss_pred CceEEEEEcCC--CCccCCC---C-CCeEEEECCEEHHHHHHHh-cCCCCeEEEEeCH-H--HHH-hhc----CC--cEE
Confidence 35669999999 9999986 4 9999999999999999998 43 6666653 1 111 211 12 334
Q ss_pred ecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCC
Q 017417 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (372)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~ 160 (372)
+.. ..+...+++.++..+.. +.+++++||.++ ...+..+++.+.+.+ ..+++.+.. ++..+ .+
T Consensus 87 ~~~--~~~~~~~i~~al~~~~~---~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~--~~~~~----~~-- 151 (236)
T 2px7_A 87 LEG--GATRQASVARLLEAASL---PLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVP--DTLMA----PE-- 151 (236)
T ss_dssp EEC--CSSHHHHHHHHHHHCCS---SEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECC--SEEEE----EC--
T ss_pred EeC--CCchHHHHHHHHHHcCC---CeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecC--CcEEE----ec--
Confidence 432 24678999999988752 579999999976 345888988876653 334344431 12111 23
Q ss_pred CCceeEeeecCCCcccCceeeeEEEeCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCC
Q 017417 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (372)
Q Consensus 161 ~~~v~~i~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~ 240 (372)
+|++..+.++.. ...+. ..++|+++.+..+.+..... + .. ..+. ..++...
T Consensus 152 ~G~v~~~~~~~~---~~~~~-~~~~f~~~~l~~~~~~~~~~-g-~~-----------------~~d~----~~ll~~~-- 202 (236)
T 2px7_A 152 GEAYGRVVPREA---FRLVQ-TPQGFFTALLREAHAYARRK-G-LE-----------------ASDD----AQLVQAL-- 202 (236)
T ss_dssp SSSCEEEECGGG---CEEEC-SCEEEEHHHHHHHHHHHHHH-T-CC-----------------CSSH----HHHHHHT--
T ss_pred CCeEEecCChHh---hcccc-CCeEEcHHHHHHHHHHHHhc-C-CC-----------------chhH----HHHHHHc--
Confidence 467765554321 11122 35677877664433211000 0 00 0000 1122221
Q ss_pred CceEEEeecchhhhhcCCccccccchHHH
Q 017417 241 KKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (372)
Q Consensus 241 ~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (372)
..++..+..++.|.+|+||+||.++...+
T Consensus 203 ~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 231 (236)
T 2px7_A 203 GYPVALVEGEATAFKITHPQDLVLAEALA 231 (236)
T ss_dssp TCCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred CCcEEEEECCccccCCCCHHHHHHHHHHH
Confidence 34677777778999999999999886654
No 49
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.58 E-value=3.6e-15 Score=141.15 Aligned_cols=203 Identities=11% Similarity=0.088 Sum_probs=109.8
Q ss_pred EEEEcCCeeecC--ChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCC-CCceeEeeecCCCccc-CceeeeEEE
Q 017417 110 IFLLNCDVCCSF--PLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD-TNELLHYTEKPETFVS-DLINCGVYV 185 (372)
Q Consensus 110 vlv~~gD~i~~~--~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~-~~~v~~i~ek~~~~~~-~~~~~Giy~ 185 (372)
=|+-.+|+++.. +|.++++.|. +++.. .+++..+|...++.. .+++ .|.|||..... .++++|+|+
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGiyI 82 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGAII 82 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSEEE
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEEEE
Confidence 467789999976 8999999885 34443 245677887777642 3566 99999875333 567999999
Q ss_pred eCHhhHHHhhhcccccchhhhhhccchhhhhhhcccccccccccccccccccCCCCceEEEeecchhhhhc--CCccccc
Q 017417 186 FTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQI--KTPGMSL 263 (372)
Q Consensus 186 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~v~~~~~~~~w~~i--~t~~d~~ 263 (372)
|++++++.+.+. .++++ +..+.+.++|....+|++. .++...+
T Consensus 83 ~~~~~l~~~~~~----------------------------------~~~~p-l~~~~~~~a~~~~~~~~~~~i~~~~~~i 127 (374)
T 2iu8_A 83 ISRTQFQKYRDL----------------------------------NKNFL-ITSESPSLVFQKCLELFITPVDSGFPGI 127 (374)
T ss_dssp EEHHHHHTSTTS----------------------------------CSCEE-EESSCHHHHHHHHHTTTSCCCCCSCCSB
T ss_pred eChhHhhhcccc----------------------------------ccceE-EEeCCHHHHHHHHHHHhccccccccCcc
Confidence 999887532211 23343 3333444445555667664 1211111
Q ss_pred cchHHHHhhccccCCc-cccCCCC-CCCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-eceEECCCCEEC
Q 017417 264 KCSGLYLAQFRLTSPN-LLASGDG-TKNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-ISCIILDGVEIM 340 (372)
Q Consensus 264 ~a~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-~~~~i~~~~~i~ 340 (372)
... ....+. ....+.. .+.+.+.+++.|++++.|++++.|++++.||++|.|+++++| .++.||++|.|+
T Consensus 128 ~~~-------~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~ 200 (374)
T 2iu8_A 128 HPT-------AVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQ 200 (374)
T ss_dssp CTT-------CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred CCC-------CEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEEC
Confidence 100 000000 0000100 122333344444455555555555555555666666666666 357777777777
Q ss_pred CCcEEE---------------------ceEECCCCEECCCcEEcC
Q 017417 341 ENAVVT---------------------NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 341 ~~~~i~---------------------~~~i~~~~~i~~~~~i~~ 364 (372)
++++|. .++|+++|.||+++.|..
T Consensus 201 ~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~ 245 (374)
T 2iu8_A 201 PGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDR 245 (374)
T ss_dssp TTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEE
T ss_pred CCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEcc
Confidence 777774 277788888887777743
No 50
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.57 E-value=4.9e-14 Score=136.91 Aligned_cols=181 Identities=13% Similarity=0.202 Sum_probs=131.5
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCccc---CCcchhhhhHhhcc--------------e---EEEEcccchHHHH
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL---GGQPMVHHPISACK--------------R---IYLVGFYEEREFA 66 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv---~g~pli~~~l~~l~--------------~---i~vv~~~~~~~i~ 66 (372)
.++.+|||||| .||||+. +.||+|+|| .|+|+++++++++. . ++++..+..+.+.
T Consensus 101 ~kvavViLAGG--~GTRLg~---~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~ 175 (505)
T 1jv1_A 101 NKVAVLLLAGG--QGTRLGV---AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTK 175 (505)
T ss_dssp TCEEEEEECCC--CCCTTSC---SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHH
T ss_pred CceEEEEEcCC--ccccCCC---CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHH
Confidence 57999999999 9999975 889999999 79999999988642 1 4455555567888
Q ss_pred HHHhhccCCCCe---eEEEecC---------------------CcccChHHHHHHHHH-----HhhccCCCeEEEEcCCe
Q 017417 67 LYVSSISNELRI---PVRYLRE---------------------DKPHGSAGALYNFRD-----LIMEDNPSHIFLLNCDV 117 (372)
Q Consensus 67 ~~~~~~~~~~~~---~i~~~~~---------------------~~~~g~~~al~~~~~-----~l~~~~~~~vlv~~gD~ 117 (372)
+|+++. ..+++ .|.+..| ..+.|+++.+..... .+.....++++|+++|+
T Consensus 176 ~~f~~~-~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn 254 (505)
T 1jv1_A 176 EFFTKH-KYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDN 254 (505)
T ss_dssp HHHHHT-GGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTB
T ss_pred HHHHhh-hhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCc
Confidence 998763 44555 3655543 246788887765542 33222236899999999
Q ss_pred e-ecCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCCCCc--eeEeeecCCC----------cccCceeeeEE
Q 017417 118 C-CSFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTNE--LLHYTEKPET----------FVSDLINCGVY 184 (372)
Q Consensus 118 i-~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~~~--v~~i~ek~~~----------~~~~~~~~Giy 184 (372)
+ ...+...++..|...++++++.+.+.. ..+..+|.+... +|+ +.++.|+|.. ...+..++|+|
T Consensus 255 ~L~~~~d~~~lg~~~~~~~~~~~~v~~k~-~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~ 331 (505)
T 1jv1_A 255 ILVKVADPRFIGFCIQKGADCGAKVVEKT-NPTEPVGVVCRV--DGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANH 331 (505)
T ss_dssp TTCCTTCHHHHHHHHHTTCSEEEEEEECC-STTCSCCEEEEE--TTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEE
T ss_pred cccccchHHHHHHHHHcCCCEEEEEEEcc-CCccCcceEEEE--CCeEEEEEEeeCCHHHhhhcccccccccceeeEEEE
Confidence 7 566777899999999999998887622 346778887765 344 4556666531 12467899999
Q ss_pred EeCHhhHHHhhh
Q 017417 185 VFTPDIFNAIQG 196 (372)
Q Consensus 185 ~~~~~~~~~l~~ 196 (372)
+|+.++++.+.+
T Consensus 332 ~f~l~~L~~i~~ 343 (505)
T 1jv1_A 332 FFTVPFLRDVVN 343 (505)
T ss_dssp EEEHHHHHHHHH
T ss_pred EecHHHHHHHHH
Confidence 999999988765
No 51
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.52 E-value=6.8e-14 Score=121.31 Aligned_cols=113 Identities=18% Similarity=0.174 Sum_probs=81.9
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce--EEEEcccchHHHHHHHhhccCCCCeeEEEecCC
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR--IYLVGFYEEREFALYVSSISNELRIPVRYLRED 86 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~--i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~~ 86 (372)
|.+|||||| .|+||+. ||+|+|++|+|||+|+++.+.. |+|++.. .+.+.. +.. .++.++.. ...
T Consensus 1 m~aiILAgG--~s~Rmg~-----~K~ll~~~G~pli~~~~~~l~~~~vvvv~~~-~~~~~~-~~~---~~~~~~v~-d~~ 67 (208)
T 3ngw_A 1 MKVAVLVGG--VGRRIGM-----EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRD-EKQAEK-LSS---RYEAEFIW-DLH 67 (208)
T ss_dssp CEEEEECCC--CCTTTTS-----CGGGCEETTEEHHHHHHHHHTTSEEEEECSS-HHHHHH-HHT---TSCSCEEC-CTT
T ss_pred CEEEEECCC--chhhCCC-----CCcccEECCeeHHHHHHHHhcCCCEEEEECC-HHHHHH-HHH---hcCCeEEe-cCC
Confidence 689999999 9999974 9999999999999999999876 7777653 333332 222 23344322 222
Q ss_pred cccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEE
Q 017417 87 KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTI 139 (372)
Q Consensus 87 ~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i 139 (372)
...|...+++.++..+ . +.+ ++.||+++ ...+..+++.+.+.+.++++
T Consensus 68 ~~~G~~~si~~gl~~~-~---~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 68 KGVGSIAGIHAALRHF-G---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CCCSHHHHHHHHHHHH-S---SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCChHHHHHHHHHHc-C---CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 3358889999999988 3 578 99999987 34588888887654555544
No 52
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=6.3e-15 Score=126.76 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=85.2
Q ss_pred eeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----EEEEcccchHHHHHHHhhccCCCCeeEEEe
Q 017417 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (372)
Q Consensus 9 ~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~ 83 (372)
|.+|||||| .|+||++ .||+|+|++|+|||+|+++++.. |+|++..+.+.+.+++.... .+...+.++
T Consensus 1 m~aiIlA~G--~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~-~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGG--KGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAY-KDYKNIVVI 73 (196)
T ss_dssp CEEEEEC------CGGGG----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHT-TTTTEEEE-
T ss_pred CEEEEECCC--CCCcCCC----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhc-cCCCCEEEE
Confidence 589999999 9999997 79999999999999999999765 77877766667888876521 111234444
Q ss_pred cCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHh-----cCCceEEEEEec
Q 017417 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRN-----YGGMGTILVIKV 144 (372)
Q Consensus 84 ~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~-----~~~~~~i~~~~~ 144 (372)
. ....|++++++.+++.+ . +.+++++||+++ ..++.++++.+.+ .+.+..+++.+.
T Consensus 74 ~-~~~~g~~~si~~al~~~-~---~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 74 D-TSGKGYIEDLNECIGYF-S---EPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp --------CCCCCTTTTTC-S---SCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred E-CCCCCcHHHHHHHHHhC-C---CCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 3 33567888888888877 2 579999999986 4569999999886 555566666554
No 53
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.45 E-value=2.8e-13 Score=116.93 Aligned_cols=104 Identities=15% Similarity=0.290 Sum_probs=78.2
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce----EEEEcccchHHHHHHHhhccCCCCeeEEE
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~----i~vv~~~~~~~i~~~~~~~~~~~~~~i~~ 82 (372)
+++.+|||||| .|+||+ ..||+|+|++|+|||+|+++.+.. |+|++....+.+ .. +++++
T Consensus 5 m~~~~iILAgG--~s~Rmg----~~~K~ll~i~G~pli~~~l~~l~~~~~~ivvv~~~~~~~~----~~----~~~~~-- 68 (201)
T 1e5k_A 5 TTITGVVLAGG--KARRMG----GVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIY----QA----SGLKV-- 68 (201)
T ss_dssp CSEEEEEECCC--CCSSSC----SSCGGGSEETTEEHHHHHHHHHHHHCSCEEEECSSSHHHH----HT----TSCCE--
T ss_pred CcceEEEEcCC--CCCcCC----CCCCceeeECceeHHHHHHHHHHhhCCEEEEEcCCcHHHH----hh----cCCeE--
Confidence 46899999999 999997 259999999999999999998765 777776554322 11 23333
Q ss_pred ecCC--cccChHHHHHHHHHHhhccCCCeEEEEcCCeee-c-CChHHHHHH
Q 017417 83 LRED--KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPEMLDA 129 (372)
Q Consensus 83 ~~~~--~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~-~-~~l~~~l~~ 129 (372)
+.+. ...|.+.+++.+++.+.. +.+++++||+++ . ..+..+++.
T Consensus 69 v~~~~~~~~G~~~si~~~l~~~~~---~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 69 IEDSLADYPGPLAGMLSVMQQEAG---EWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp ECCCTTCCCSHHHHHHHHHHHCCS---SEEEEEETTCTTCCTTHHHHHHHT
T ss_pred EecCCCCCCCHHHHHHHHHHhCCC---CcEEEEeCCcCcCCHHHHHHHHhh
Confidence 3222 226899999999998853 579999999976 3 447777765
No 54
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.43 E-value=2.6e-13 Score=127.39 Aligned_cols=115 Identities=12% Similarity=0.210 Sum_probs=83.8
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce------EEEEcccchHHHHHHHhhccCCCCeeEE
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPVR 81 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~------i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 81 (372)
++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++. ..+.+.+++. . +.
T Consensus 3 ki~aIILAaG--~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~----~----v~ 68 (371)
T 1w55_A 3 EMSLIMLAAG--NSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTK----N----YE 68 (371)
T ss_dssp CEEEEEECCS--CCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCS----S----SE
T ss_pred ccEEEEECCC--CCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhC----C----CE
Confidence 5899999999 9999984 679999999999999999998863 677666 4443333221 1 23
Q ss_pred EecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEe
Q 017417 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIK 143 (372)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~~~~~~~~~~~i~~~~ 143 (372)
++. ...|..++++.+++.+.. +.+++++||.++ ...+.++++.+.+. +..+.+.+
T Consensus 69 ~v~--~g~g~~~sv~~aL~~l~~---d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~ 125 (371)
T 1w55_A 69 FIE--GGDTRAESLKKALELIDS---EFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALK 125 (371)
T ss_dssp EEE--CCSSHHHHHHHHHTTCCS---SEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEEC
T ss_pred EEe--CCCChHHHHHHHHHhcCC---CeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEE
Confidence 332 235788999999988752 679999999987 44588888877654 34444444
No 55
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.42 E-value=5.8e-13 Score=118.25 Aligned_cols=121 Identities=21% Similarity=0.211 Sum_probs=67.7
Q ss_pred CCCceEEEeecchh----hhhcCCccccccchHHHHhhccccCCccccC-------C--C-CCCCcEEcCCcEECCCCEE
Q 017417 239 AGKKQLYTYETMDF----WEQIKTPGMSLKCSGLYLAQFRLTSPNLLAS-------G--D-GTKNATIIGDVYVHPSAKI 304 (372)
Q Consensus 239 ~~~~~v~~~~~~~~----w~~i~t~~d~~~a~~~~~~~~~~~~~~~~~~-------~--~-~~~~~~~~~~~~i~~~~~i 304 (372)
....+++.|...++ |.++++ ++.++..|+..+.......... + . ..+.+.+.+++.|++++.|
T Consensus 36 ~~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I 112 (240)
T 3r8y_A 36 PETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVI 112 (240)
T ss_dssp CTTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEE
T ss_pred CCcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEE
Confidence 45567888887777 999987 5556655554332221111100 0 0 0234555566666666666
Q ss_pred CCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEc---------eEECCCCEECCCcEE
Q 017417 305 HPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVTN---------AIVGWKSSIGRWSRV 362 (372)
Q Consensus 305 ~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i 362 (372)
++++.|.+++.||++|.|+.++.|. +|+||++|.|+++|.+.+ ++|+++|.||.++.|
T Consensus 113 ~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I 180 (240)
T 3r8y_A 113 MMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVV 180 (240)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEE
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEE
Confidence 6666665566666666666666654 566666666666655543 444444444444444
No 56
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.37 E-value=4.4e-12 Score=122.55 Aligned_cols=181 Identities=14% Similarity=0.108 Sum_probs=122.4
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccC-CcchhhhhHhhcce----------E-EEEcccchHHHHHHHh-hccC
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR----------I-YLVGFYEEREFALYVS-SISN 74 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~-g~pli~~~l~~l~~----------i-~vv~~~~~~~i~~~~~-~~~~ 74 (372)
++.+|||||| .||||+. +.||+|+||+ |+|+++++++++.. + +.+..+..+.+.+|++ +. .
T Consensus 75 k~avViLAGG--lGTRLg~---~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~-~ 148 (505)
T 2oeg_A 75 STVVLKLNGG--LGTGMGL---CDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARY-P 148 (505)
T ss_dssp TEEEEEEECC--CCGGGTC---CSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHC-H
T ss_pred cceEEEEcCC--cccccCC---CCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhh-h
Confidence 7899999999 9999994 8899999999 99999999988764 3 4444555677888887 42 2
Q ss_pred CCCe---eEEEe-----------------------cCCcccChHHHHHHH-----HHHhhccCCCeEEEEcCCeeec-CC
Q 017417 75 ELRI---PVRYL-----------------------REDKPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCCS-FP 122 (372)
Q Consensus 75 ~~~~---~i~~~-----------------------~~~~~~g~~~al~~~-----~~~l~~~~~~~vlv~~gD~i~~-~~ 122 (372)
.+++ .+.+. ....+.|+++.+... ++.+.....++++|+++|.+.. .|
T Consensus 149 ~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D 228 (505)
T 2oeg_A 149 WLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATID 228 (505)
T ss_dssp HHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCC
T ss_pred ccCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccC
Confidence 2232 22211 112345888887654 3443322236899999999873 46
Q ss_pred hHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcC-----CCCc---------eeEeeecCCC--------cccCcee
Q 017417 123 LPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP-----DTNE---------LLHYTEKPET--------FVSDLIN 180 (372)
Q Consensus 123 l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~-----~~~~---------v~~i~ek~~~--------~~~~~~~ 180 (372)
+ .++..|.+.++++++.+.+... ....+|.+..+. .+|+ ++++.+-|.. ....+.+
T Consensus 229 ~-~llg~~~~~~ad~~~~v~~k~~-~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~N 306 (505)
T 2oeg_A 229 K-RVLAYMEKEKIDFLMEVCRRTE-SDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFN 306 (505)
T ss_dssp H-HHHHHHHHHTCSEEEEEEECCT-TCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEEE
T ss_pred H-HHHHHHHhcCCcEEEEEEEecC-CccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcccCccccCeeE
Confidence 7 8899999999999999887632 124567666521 2466 4444443321 1234478
Q ss_pred eeEEEeCHhhHHHhhh
Q 017417 181 CGVYVFTPDIFNAIQG 196 (372)
Q Consensus 181 ~Giy~~~~~~~~~l~~ 196 (372)
+...+|+-++++.+.+
T Consensus 307 inn~~~~l~~l~~~~~ 322 (505)
T 2oeg_A 307 TNNLWIRLPVLLETMQ 322 (505)
T ss_dssp EEEEEEEHHHHHHHHH
T ss_pred EEEEEEEHHHHHHHHh
Confidence 9999999777766543
No 57
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.30 E-value=5.2e-13 Score=129.14 Aligned_cols=77 Identities=18% Similarity=0.131 Sum_probs=65.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
+.+.+.+++.||+++.|++++.| ++++||++|.|+++|+|.+|+||++|.|+++|.|.+++||++|.||++|.|+++
T Consensus 284 p~a~i~g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~ 360 (496)
T 3c8v_A 284 GYAVIKGDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGS 360 (496)
T ss_dssp TTSEEESSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECC
T ss_pred CCcEEeCCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCC
Confidence 34556678888889999888888 588899999999999998898999988888888888888888888888888876
No 58
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.27 E-value=1.1e-10 Score=109.36 Aligned_cols=181 Identities=16% Similarity=0.241 Sum_probs=127.8
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCccc---CCcchhhhhHhhcc-------------e-----EEEEcccchHHH
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL---GGQPMVHHPISACK-------------R-----IYLVGFYEEREF 65 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv---~g~pli~~~l~~l~-------------~-----i~vv~~~~~~~i 65 (372)
.++.+|+|||| .||||+. +.||+|+|| .|+|++++.++.+. . ++++.....+.+
T Consensus 34 gkvavvlLAGG--~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t 108 (405)
T 3oc9_A 34 GKTALITPAGG--QGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEI 108 (405)
T ss_dssp TCEEEEEECCS--BCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHH
T ss_pred CceEEEEecCC--CcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHH
Confidence 57899999999 9999976 889999999 99999999987762 1 455555667788
Q ss_pred HHHHhhccCCCCe---eEEEecC---------------------CcccChHHHHHHH-----HHHhhccCCCeEEEEcCC
Q 017417 66 ALYVSSISNELRI---PVRYLRE---------------------DKPHGSAGALYNF-----RDLIMEDNPSHIFLLNCD 116 (372)
Q Consensus 66 ~~~~~~~~~~~~~---~i~~~~~---------------------~~~~g~~~al~~~-----~~~l~~~~~~~vlv~~gD 116 (372)
.+++++. ..+++ .+.+..| ..+.|+++.+... ++.+....-+++++.+.|
T Consensus 109 ~~~f~~~-~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvD 187 (405)
T 3oc9_A 109 NNYFKEH-QYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVD 187 (405)
T ss_dssp HHHHHHT-GGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTT
T ss_pred HHHHHhC-cccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCC
Confidence 8999763 33443 2444322 2346666655543 333433334689999999
Q ss_pred e-eecCChHHHHHHHHhcCCceEEEEEecCCccc-ccceEEEEcCCCCceeEeeecCCC---------cccCceeeeEEE
Q 017417 117 V-CCSFPLPEMLDAHRNYGGMGTILVIKVSAESA-SQFGELVADPDTNELLHYTEKPET---------FVSDLINCGVYV 185 (372)
Q Consensus 117 ~-i~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~v~~~~~~~~v~~i~ek~~~---------~~~~~~~~Giy~ 185 (372)
. +.......++..|.+.++++++-+.+.. ++ ...|.+.......+|.++.|.|.. ...+..++++++
T Consensus 188 N~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~--~~dek~Gvl~~~dg~~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~ 265 (405)
T 3oc9_A 188 NILCKDVDPNMIGYMDLLQSEICIKIVKKG--FKEEKVGVLVKEQERIKVVEYTELTDELNKQLSNGEFIYNCGHISING 265 (405)
T ss_dssp BTTCCSSCHHHHHHHHHTTCSEEEEEEECC--STTCSCCEEEEETTEEEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHcCCCEEEEEEECC--CCCCccceEEEECCeeEEEEEeeCCHHHhhcCCCCceeeccceeEeee
Confidence 9 5577788889999999999988887753 33 567776643113467777775432 123466889999
Q ss_pred eCHhhHHHhh
Q 017417 186 FTPDIFNAIQ 195 (372)
Q Consensus 186 ~~~~~~~~l~ 195 (372)
|+.++++.+.
T Consensus 266 fs~~fL~~i~ 275 (405)
T 3oc9_A 266 YSTSFLEKAA 275 (405)
T ss_dssp EEHHHHHHHT
T ss_pred cCHHHHHHhh
Confidence 9999998875
No 59
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.22 E-value=1.4e-10 Score=112.30 Aligned_cols=183 Identities=17% Similarity=0.253 Sum_probs=123.8
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCcccC---CcchhhhhHhhcce-------------------EEEEcccchHH
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG---GQPMVHHPISACKR-------------------IYLVGFYEERE 64 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~---g~pli~~~l~~l~~-------------------i~vv~~~~~~~ 64 (372)
.++.+|||||| .||||+. +.||+|+||+ |+|++++.++++.. ++++..+..+.
T Consensus 102 gkvavvlLaGG--~GTRLg~---~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~ 176 (486)
T 2yqc_A 102 GEVAVLLMAGG--QGTRLGS---SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNA 176 (486)
T ss_dssp TCEEEEEEEES--BCGGGTC---SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHH
T ss_pred CCeEEEEEcCC--ccccCCC---CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHH
Confidence 47999999999 9999964 8899999999 99999999876431 45555566677
Q ss_pred HHHHHhhccCCCCe---eEEEecC--------C--------------cccChHHHHHHH-----HHHhhccCCCeEEEEc
Q 017417 65 FALYVSSISNELRI---PVRYLRE--------D--------------KPHGSAGALYNF-----RDLIMEDNPSHIFLLN 114 (372)
Q Consensus 65 i~~~~~~~~~~~~~---~i~~~~~--------~--------------~~~g~~~al~~~-----~~~l~~~~~~~vlv~~ 114 (372)
+.+++++. ..+++ .|.+..| + .+.|+++.+... ++.+....-+++.+.+
T Consensus 177 t~~~~~~~-~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~ 255 (486)
T 2yqc_A 177 TESFFIEN-NYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYC 255 (486)
T ss_dssp HHHHHHHT-GGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEE
T ss_pred HHHHHhhc-cccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEEC
Confidence 88999763 33343 2332211 1 356787766544 3334333346899999
Q ss_pred CCeeec-CChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCCCC--ceeEeeecCCC------c------ccCce
Q 017417 115 CDVCCS-FPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTN--ELLHYTEKPET------F------VSDLI 179 (372)
Q Consensus 115 gD~i~~-~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~~--~v~~i~ek~~~------~------~~~~~ 179 (372)
.|.+.. ..-..++..|...++++++.+.+.. ......|.+.....+| +|.++.|++.. . ..+..
T Consensus 256 vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~-~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~ 334 (486)
T 2yqc_A 256 VDNCLVKVADPIFIGFAIAKKFDLATKVVRKR-DANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAA 334 (486)
T ss_dssp TTBTTCCTTCHHHHHHHHHHTCSEEEEEEECC-STTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCEE
T ss_pred CCCceeeccCHHHHHHHHHcCCCEEEEEEEcC-CCCCceeEEEEEecCCCEEEEEEecCCHHHhhcccccccccccccce
Confidence 998874 2224577888888999988776642 1235567666431134 47777777631 1 24678
Q ss_pred eeeEEEeCHhhHHH-hhh
Q 017417 180 NCGVYVFTPDIFNA-IQG 196 (372)
Q Consensus 180 ~~Giy~~~~~~~~~-l~~ 196 (372)
++|+|+|+.++++. +.+
T Consensus 335 Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 335 NIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEEEEEEEHHHHHHHHHH
T ss_pred eEEEEEEeHHHHHHHHHh
Confidence 99999999999987 544
No 60
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.03 E-value=1e-09 Score=92.16 Aligned_cols=70 Identities=19% Similarity=0.238 Sum_probs=45.4
Q ss_pred cEECCCCEECCCCEECC----CcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 296 VYVHPSAKIHPTAKIGP----NVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~----~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
+.||+++.|++++.|.. ++.||++|.|+.++.|.+++|+++|.|+.++.|. ++.|++++.|+.++.+.++
T Consensus 52 v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~ 126 (173)
T 1xhd_A 52 TIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQG 126 (173)
T ss_dssp EEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCC
Confidence 55666666666666642 5666666666666666666666666666666666 5666666666666666544
No 61
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.01 E-value=1.2e-09 Score=92.94 Aligned_cols=71 Identities=24% Similarity=0.286 Sum_probs=51.3
Q ss_pred cEECCCCEECCCCEE-----------CCCcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 296 VYVHPSAKIHPTAKI-----------GPNVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i-----------~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.||+++.|++++.| ..++.||++|.|+.++.|.+++|+++|.|+.+|+|. ++.|++++.|+.++.|.
T Consensus 55 i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~ 134 (187)
T 3r3r_A 55 VAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVP 134 (187)
T ss_dssp EEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred EEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCEECCCCEECCCCEECCCCEECCCCEEC
Confidence 366777777777777 346777777777777777777777777777777775 67777777777777776
Q ss_pred CCC
Q 017417 364 ASS 366 (372)
Q Consensus 364 ~~~ 366 (372)
++.
T Consensus 135 ~~~ 137 (187)
T 3r3r_A 135 QHK 137 (187)
T ss_dssp TTC
T ss_pred CCc
Confidence 543
No 62
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.00 E-value=6.5e-10 Score=96.01 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=29.7
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEECCCcEEe----ceEECCCCEECCCcEE
Q 017417 295 DVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI----SCIILDGVEIMENAVV 345 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i 345 (372)
++.||+++.|+++++|.+++.||++|.|++++.|. +++||++|.|+++|+|
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred eeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 45666666666666665556666666666666662 2555555555555555
No 63
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.99 E-value=4.3e-09 Score=98.52 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=55.8
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.+.+.+++.|++++.|+++++|++++.||++|.|+++|.|. +|.||++|.|+++++|. ++.||++|.|++++.|.
T Consensus 107 p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig 184 (357)
T 4e79_A 107 STARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVIG 184 (357)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEES
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEEC
Confidence 445666667777777777777777777777777777777776 67777777777777775 77777777777777774
No 64
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.99 E-value=1.5e-09 Score=92.69 Aligned_cols=70 Identities=16% Similarity=0.166 Sum_probs=48.7
Q ss_pred EECCCCEECCCCEECC-----CcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcCCC
Q 017417 297 YVHPSAKIHPTAKIGP-----NVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQASS 366 (372)
Q Consensus 297 ~i~~~~~i~~~~~i~~-----~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~ 366 (372)
.||+++.|++++.|.. +++||++|.|+.++.|.+++|+++|.|+.+|.|. ++.|++++.|++++.|.++.
T Consensus 74 ~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~ 149 (191)
T 3ixc_A 74 EVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGK 149 (191)
T ss_dssp EECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCc
Confidence 5566666666666652 6677777777777777777777777777777777 57777777777777776543
No 65
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.98 E-value=2.9e-09 Score=94.28 Aligned_cols=78 Identities=28% Similarity=0.316 Sum_probs=66.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEEC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSIG 357 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i~ 357 (372)
..+.+.+++.||+++.|+++++|+++++||++|.|++++.+.+ ++|+++|.||.+|+|. ++.||++++|+
T Consensus 114 ~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~ 193 (240)
T 3r8y_A 114 MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVA 193 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEEC
Confidence 3455566777788888888888878889999999999999876 8999999999999994 99999999999
Q ss_pred CCcEEcCC
Q 017417 358 RWSRVQAS 365 (372)
Q Consensus 358 ~~~~i~~~ 365 (372)
+++.+...
T Consensus 194 ~gsvV~~~ 201 (240)
T 3r8y_A 194 AGAVVTED 201 (240)
T ss_dssp TTCEECSC
T ss_pred CCCEECCC
Confidence 99998754
No 66
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.97 E-value=2.1e-09 Score=90.24 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=50.7
Q ss_pred cEECCCCEECCCCEECC----CcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 296 VYVHPSAKIHPTAKIGP----NVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~----~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
+.||+++.|++++.|.. +++||++|.|+.++.|.+++|+++|.|+.+|.|. ++.|++++.|+.++.+.++
T Consensus 50 ~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~ 124 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPN 124 (173)
T ss_dssp EEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTT
T ss_pred EEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEECCC
Confidence 66677777777777653 4777777777777777777777777777777776 6777777777777777654
No 67
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.96 E-value=4.7e-09 Score=89.76 Aligned_cols=32 Identities=19% Similarity=0.044 Sum_probs=14.5
Q ss_pred eEECCCCEECCCcEEE-ceEECCCCEECCCcEE
Q 017417 331 CIILDGVEIMENAVVT-NAIVGWKSSIGRWSRV 362 (372)
Q Consensus 331 ~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 362 (372)
+.|+++|.|+.+++|. ++.|++++.||+++.+
T Consensus 144 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 144 VKIGKNCFLGINSCVLPNLSLADDSILGGGATL 176 (194)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCCEEcCCCEECCCCEECCCCEECCCCEE
Confidence 4444444444444443 4444444444444444
No 68
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.96 E-value=3.2e-09 Score=95.26 Aligned_cols=76 Identities=25% Similarity=0.164 Sum_probs=66.5
Q ss_pred CcEEcCCcEECCCCEEC--CCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEE
Q 017417 289 NATIIGDVYVHPSAKIH--PTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSI 356 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~--~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i 356 (372)
...+.+++.||+++.|+ .+++|+++++||++|.|+.+++|.+ ++||++|.||.+|+|. ++.||++++|
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~I 243 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKI 243 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEE
Confidence 45677788888888887 6788888899999999999988875 6999999999999999 8999999999
Q ss_pred CCCcEEcC
Q 017417 357 GRWSRVQA 364 (372)
Q Consensus 357 ~~~~~i~~ 364 (372)
|.++.|..
T Consensus 244 GagsvV~k 251 (287)
T 3mc4_A 244 AAGSVVLK 251 (287)
T ss_dssp CTTCEECS
T ss_pred CCCCEEcc
Confidence 99999874
No 69
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.95 E-value=2.7e-09 Score=91.25 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=52.8
Q ss_pred CcEEcCCcEEC--CCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 289 NATIIGDVYVH--PSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 289 ~~~~~~~~~i~--~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
.+.+.+++.|+ +++.|++++++.+++.||++|.|+.++.|. +|.|+++|.|+++|.|. ++.|++++.||.++.|.+
T Consensus 81 ~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~ 160 (194)
T 3bfp_A 81 SALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLP 160 (194)
T ss_dssp TCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECC
Confidence 34555566677 777777777777677777777777777775 67777777777777776 377777777777666654
Q ss_pred C
Q 017417 365 S 365 (372)
Q Consensus 365 ~ 365 (372)
+
T Consensus 161 ~ 161 (194)
T 3bfp_A 161 N 161 (194)
T ss_dssp T
T ss_pred C
Confidence 3
No 70
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.95 E-value=4.8e-09 Score=94.45 Aligned_cols=77 Identities=19% Similarity=0.283 Sum_probs=49.3
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEE-------------EceEECCCC
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVV-------------TNAIVGWKS 354 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i-------------~~~~i~~~~ 354 (372)
.+.+.+++.|++++.|+++|.|.+++.||++|.|++++.|. ++.||++|.|+++|+| .+++||+++
T Consensus 7 ~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~ 86 (270)
T 1j2z_A 7 TAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDN 86 (270)
T ss_dssp TCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSC
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCC
Confidence 34555566666666666666666666666666666666666 5666666666666666 356666666
Q ss_pred EECCCcEEcCC
Q 017417 355 SIGRWSRVQAS 365 (372)
Q Consensus 355 ~i~~~~~i~~~ 365 (372)
.|++++.|+.+
T Consensus 87 ~I~~~~~I~~~ 97 (270)
T 1j2z_A 87 LIREFCMINPG 97 (270)
T ss_dssp EECTTCEECCC
T ss_pred EECCCeEEcCC
Confidence 66666666544
No 71
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.95 E-value=5.1e-09 Score=91.36 Aligned_cols=74 Identities=18% Similarity=0.199 Sum_probs=43.2
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEec-eEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLIS-CIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
.+.+++.||.++.|.++++|..++.||++|.|++++.|.+ +.|+++|.|+.+|+|. ++.|++++.||+++.+..
T Consensus 125 ~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igagsvv~~ 200 (220)
T 4ea9_A 125 AINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVR 200 (220)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCCEECCCCEEcc
Confidence 3334444444444444555544555555555555555553 6666666666666666 566677777777766653
No 72
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.94 E-value=1.9e-09 Score=99.47 Aligned_cols=79 Identities=24% Similarity=0.274 Sum_probs=68.2
Q ss_pred CCcEEcC-CcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEcCCC
Q 017417 288 KNATIIG-DVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQASS 366 (372)
Q Consensus 288 ~~~~~~~-~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~ 366 (372)
...++.+ ++.+++++.|++++.|.++++||++|+|+++|.|.+|.|++++.|+++|+|++++|++++.|+.++.+.+.+
T Consensus 57 ~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s 136 (334)
T 2pig_A 57 GDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQS 136 (334)
T ss_dssp SSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSC
T ss_pred CceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCE
Confidence 3457777 888999999999999999999999999999999999999999999999999988888888888777776554
No 73
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.94 E-value=7.3e-09 Score=88.34 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=18.4
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL 328 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i 328 (372)
.+.+++.||+++.|++++.|..++.||++|.|+.++.|
T Consensus 29 ~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I 66 (192)
T 3mqg_A 29 HICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSV 66 (192)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEE
T ss_pred EECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEE
Confidence 33444444555555554544444555555555554444
No 74
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.92 E-value=6.6e-09 Score=93.37 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=35.5
Q ss_pred EcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE--------------eceEECCCCEECCCcEEEc--------eE
Q 017417 292 IIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL--------------ISCIILDGVEIMENAVVTN--------AI 349 (372)
Q Consensus 292 ~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i--------------~~~~i~~~~~i~~~~~i~~--------~~ 349 (372)
+.+++.||+++.|+++++|.+++.||++|.|++++.| .+++||++|.|+++|+|.. +.
T Consensus 31 I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~ 110 (266)
T 3r0s_A 31 VSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTR 110 (266)
T ss_dssp ECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEE
T ss_pred ECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEE
Confidence 3334444444444444444445555555555555555 3455555555555555542 44
Q ss_pred ECCCCEECCCcEE
Q 017417 350 VGWKSSIGRWSRV 362 (372)
Q Consensus 350 i~~~~~i~~~~~i 362 (372)
||+++.|+.++.|
T Consensus 111 IG~~~~I~~~~~I 123 (266)
T 3r0s_A 111 IGDNAFIMAYCHI 123 (266)
T ss_dssp ECTTCEECTTCEE
T ss_pred ECCCceeCCcceE
Confidence 5544444444444
No 75
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.92 E-value=3.9e-09 Score=89.64 Aligned_cols=78 Identities=26% Similarity=0.334 Sum_probs=67.3
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCc---EECCCCEECCCcEE------------eceEECCCCEECCCcEEEceEECC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNV---SISANARIGAGVRL------------ISCIILDGVEIMENAVVTNAIVGW 352 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s---~ig~~~~i~~~~~i------------~~~~i~~~~~i~~~~~i~~~~i~~ 352 (372)
+.+.+.+++.||+++.|++++.|.+++ .||++|.|++++.| .+++|+++|.|+++|.|.++.||+
T Consensus 26 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~ 105 (187)
T 3r3r_A 26 TSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGN 105 (187)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECS
T ss_pred CCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECC
Confidence 345667778888999999988887644 99999999999999 679999999999999999999999
Q ss_pred CCEECCCcEEcCC
Q 017417 353 KSSIGRWSRVQAS 365 (372)
Q Consensus 353 ~~~i~~~~~i~~~ 365 (372)
++.||.++.|.++
T Consensus 106 ~~~Ig~~~~I~~~ 118 (187)
T 3r3r_A 106 RVLVGMGSIVLDG 118 (187)
T ss_dssp SEEECTTCEECTT
T ss_pred CCEECCCCEECCC
Confidence 9999999988765
No 76
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.91 E-value=3.7e-09 Score=89.96 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=54.2
Q ss_pred cEECCCCEECCCCEECC-----------CcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 296 VYVHPSAKIHPTAKIGP-----------NVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~-----------~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.||+++.|++++.|.. ++.||++|.|+.++.|.+++|+++|.|+.+|+|. ++.|++++.|+.++.|.
T Consensus 59 i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~ 138 (189)
T 3r1w_A 59 IRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVS 138 (189)
T ss_dssp EEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred eEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcEECCCCEEcCCCEECCCCEEccCCEEC
Confidence 46777777777777753 3478888888888888888888888888888876 78888888888888877
Q ss_pred CCC
Q 017417 364 ASS 366 (372)
Q Consensus 364 ~~~ 366 (372)
++.
T Consensus 139 ~g~ 141 (189)
T 3r1w_A 139 PGK 141 (189)
T ss_dssp TTC
T ss_pred CCC
Confidence 653
No 77
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.91 E-value=9.7e-09 Score=91.50 Aligned_cols=77 Identities=23% Similarity=0.192 Sum_probs=66.8
Q ss_pred CcEEcCCcEECCCCEEC--CCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEE
Q 017417 289 NATIIGDVYVHPSAKIH--PTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSI 356 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~--~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i 356 (372)
...+++++.||+++.|+ .+++|+++++||++|.|+.+++|.+ ++||++|.||.+++|. ++.||++++|
T Consensus 137 g~~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~I 216 (267)
T 1ssq_A 137 DVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKI 216 (267)
T ss_dssp SCEECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred ceEeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEE
Confidence 45677788888888888 4688888999999999999999975 5999999999999998 8999999999
Q ss_pred CCCcEEcCC
Q 017417 357 GRWSRVQAS 365 (372)
Q Consensus 357 ~~~~~i~~~ 365 (372)
|.++.|...
T Consensus 217 GagsvV~~d 225 (267)
T 1ssq_A 217 GANSVVLNP 225 (267)
T ss_dssp CTTCEECSC
T ss_pred CCCCEEccC
Confidence 999998643
No 78
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.91 E-value=5.2e-09 Score=89.23 Aligned_cols=78 Identities=22% Similarity=0.244 Sum_probs=65.8
Q ss_pred CCcEEcCCcEECCCCEECCCCEECC---CcEECCCCEECCCcEEe------ceEECCCCEECCCcEEEceEECCCCEECC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGP---NVSISANARIGAGVRLI------SCIILDGVEIMENAVVTNAIVGWKSSIGR 358 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~---~s~ig~~~~i~~~~~i~------~~~i~~~~~i~~~~~i~~~~i~~~~~i~~ 358 (372)
+.+.+.+++.||+++.|++++.|.+ ++.||++|.|++++.|. +++|+++|.|+++|.|.+++|+++|.||.
T Consensus 44 ~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~ 123 (191)
T 3ixc_A 44 GNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGM 123 (191)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECT
T ss_pred CCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECC
Confidence 3456666778888888888888863 34889999999999997 89999999999999999999999998888
Q ss_pred CcEEcCC
Q 017417 359 WSRVQAS 365 (372)
Q Consensus 359 ~~~i~~~ 365 (372)
++.|.++
T Consensus 124 ~~~I~~~ 130 (191)
T 3ixc_A 124 GSIVMDR 130 (191)
T ss_dssp TCEECTT
T ss_pred CCEEeCC
Confidence 8888765
No 79
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.89 E-value=8.5e-09 Score=93.71 Aligned_cols=77 Identities=22% Similarity=0.257 Sum_probs=60.7
Q ss_pred CcEEcCCcEECCCCEE--CCCCEECCCcEECCCCEECCCcEEec-e-----------------EECCCCEECCCcEEE-c
Q 017417 289 NATIIGDVYVHPSAKI--HPTAKIGPNVSISANARIGAGVRLIS-C-----------------IILDGVEIMENAVVT-N 347 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i--~~~~~i~~~s~ig~~~~i~~~~~i~~-~-----------------~i~~~~~i~~~~~i~-~ 347 (372)
...+++++.||+++.| +.+++|+++++||++|.|+.+++|.+ + +||++|.||.+|+|. +
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~g 269 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILGR 269 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEESS
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECCC
Confidence 3456667777777777 66777777777777777777777753 3 799999999999999 9
Q ss_pred eEECCCCEECCCcEEcCC
Q 017417 348 AIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 348 ~~i~~~~~i~~~~~i~~~ 365 (372)
+.||+++.||+++.|...
T Consensus 270 v~IGd~a~IGagsvV~~d 287 (310)
T 3f1x_A 270 VTIGKGATVGGNIWVTEN 287 (310)
T ss_dssp CEECTTCEECSSCEECSC
T ss_pred cEECCCCEECCCCEECCc
Confidence 999999999999998743
No 80
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.88 E-value=8.7e-09 Score=86.38 Aligned_cols=78 Identities=22% Similarity=0.250 Sum_probs=67.9
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCC---cEECCCCEECCCcEEe-----ceEECCCCEECCCcEEEceEECCCCEECCC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPN---VSISANARIGAGVRLI-----SCIILDGVEIMENAVVTNAIVGWKSSIGRW 359 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~---s~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~ 359 (372)
+.+.+.+++.||+++.|++++.|.+. +.||++|.|++++.|. +++|+++|.|++++.|.+++|++++.||.+
T Consensus 23 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~ 102 (173)
T 1xhd_A 23 DYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMG 102 (173)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTT
T ss_pred CCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCC
Confidence 34566677889999999999998754 8999999999999998 899999999999999999999999999988
Q ss_pred cEEcCC
Q 017417 360 SRVQAS 365 (372)
Q Consensus 360 ~~i~~~ 365 (372)
+.|.++
T Consensus 103 ~~i~~~ 108 (173)
T 1xhd_A 103 SIILDG 108 (173)
T ss_dssp CEECTT
T ss_pred CEEcCC
Confidence 888765
No 81
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.88 E-value=1.4e-08 Score=91.25 Aligned_cols=77 Identities=23% Similarity=0.187 Sum_probs=66.0
Q ss_pred CcEEcCCcEECCCCEEC--CCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEE
Q 017417 289 NATIIGDVYVHPSAKIH--PTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSI 356 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~--~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i 356 (372)
...+.+++.||+++.|+ .+++|+++++||++|.|+.+++|.+ ++|+++|.|+.+|+|. ++.||++++|
T Consensus 157 g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~I 236 (289)
T 1t3d_A 157 QVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKI 236 (289)
T ss_dssp SCEECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred ceEEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEE
Confidence 45677778888888887 4688888899999999999999874 6999999999999998 8999999999
Q ss_pred CCCcEEcCC
Q 017417 357 GRWSRVQAS 365 (372)
Q Consensus 357 ~~~~~i~~~ 365 (372)
|.++.|...
T Consensus 237 GagsvV~~d 245 (289)
T 1t3d_A 237 GAGSVVLQP 245 (289)
T ss_dssp CTTCEECSC
T ss_pred CCCCEEccC
Confidence 999998753
No 82
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.88 E-value=1.4e-08 Score=91.61 Aligned_cols=38 Identities=29% Similarity=0.230 Sum_probs=17.2
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL 328 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i 328 (372)
.+.+++.|++++.|+++++|.+++.||++|.|+++|.|
T Consensus 16 ~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I 53 (273)
T 3fs8_A 16 IIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSIL 53 (273)
T ss_dssp EECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred EECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEe
Confidence 33344444444444444444444444444444444444
No 83
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.87 E-value=1.4e-08 Score=94.59 Aligned_cols=17 Identities=24% Similarity=0.476 Sum_probs=10.1
Q ss_pred eEECCCCEECCCcEEcC
Q 017417 348 AIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 348 ~~i~~~~~i~~~~~i~~ 364 (372)
++||++|.||+++.|..
T Consensus 201 v~IGd~v~Ig~~~~I~~ 217 (341)
T 3eh0_A 201 VIIGDRVEIGACTTIDR 217 (341)
T ss_dssp EEECSSCEECTTCEEEC
T ss_pred EEECCCcEECCccEeec
Confidence 55666666666666653
No 84
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.87 E-value=1.4e-08 Score=90.79 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=40.4
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE--------------eceEECCCCEECCCcEEE-------ce
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL--------------ISCIILDGVEIMENAVVT-------NA 348 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i--------------~~~~i~~~~~i~~~~~i~-------~~ 348 (372)
+.+.+++.|++++.|++++.|.+++.||++|.|++++.| .+++||++|.|+++|+|. .+
T Consensus 25 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~ 104 (259)
T 3hsq_A 25 SIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPT 104 (259)
T ss_dssp CEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCE
T ss_pred CEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcE
Confidence 344445555555555555555555666666666666666 245666666666666665 44
Q ss_pred EECCCCEECCCcEE
Q 017417 349 IVGWKSSIGRWSRV 362 (372)
Q Consensus 349 ~i~~~~~i~~~~~i 362 (372)
.||+++.|+.++.|
T Consensus 105 ~IG~~~~I~~~~~I 118 (259)
T 3hsq_A 105 VIGNKNYFMGNSHV 118 (259)
T ss_dssp EECSSCEECTTCEE
T ss_pred EECCCcEEcCCcEE
Confidence 45554444444443
No 85
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.87 E-value=1.1e-08 Score=93.65 Aligned_cols=74 Identities=18% Similarity=0.325 Sum_probs=39.3
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-----ceEECCCCEECCCcEE
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-----NAIVGWKSSIGRWSRV 362 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i 362 (372)
.+.+.+++.|++++.|+++++|++++.||++|.|+++++|. ++.||++|.|++++.|. +++||+++.|++++.|
T Consensus 13 ~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 13 SAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVV 92 (305)
T ss_dssp TSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEe
Confidence 34445555555555555555555555555555555555554 45555555555555554 3445555555554444
No 86
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.87 E-value=1.5e-08 Score=94.87 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=51.4
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-eceEECCCCEECCCcEEE--------------------ceE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-ISCIILDGVEIMENAVVT--------------------NAI 349 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~--------------------~~~ 349 (372)
.+.+++.|++++.|+++++|++++.||++|.|+++++| .+++||++|.|+++++|. +++
T Consensus 128 ~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~ 207 (357)
T 4e79_A 128 VIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVL 207 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEE
Confidence 33444455555555555555556666666666666666 467788888888888874 678
Q ss_pred ECCCCEECCCcEEcCCC
Q 017417 350 VGWKSSIGRWSRVQASS 366 (372)
Q Consensus 350 i~~~~~i~~~~~i~~~~ 366 (372)
|+++|.||+++.|..+.
T Consensus 208 IGd~v~IG~~~~I~~g~ 224 (357)
T 4e79_A 208 IGNDVRIGSNCSIDRGA 224 (357)
T ss_dssp ECTTCEECTTCEECCCS
T ss_pred EcCCcEEccccEEeccc
Confidence 88888888888887663
No 87
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.86 E-value=1.2e-08 Score=92.52 Aligned_cols=56 Identities=29% Similarity=0.329 Sum_probs=26.5
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEE
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVV 345 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 345 (372)
+.+.+++.|++++.|+++++|.+++.||++|.|++++.|. ++.||++|.|+++|.|
T Consensus 29 a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 29 AIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEE
Confidence 3344444444444444444444444444444444444444 3444455555444444
No 88
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.86 E-value=1.2e-08 Score=93.04 Aligned_cols=75 Identities=27% Similarity=0.242 Sum_probs=56.1
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEECCCc
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSIGRWS 360 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~ 360 (372)
.+..++.||+++.|.++++|+.++.||++|.|+.++.|.+ ++|+++|.|+.+|+|. ++.||++++||.++
T Consensus 154 ~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgags 233 (304)
T 3eg4_A 154 FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGV 233 (304)
T ss_dssp EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCC
Confidence 3444556666666666666666677777777777777765 8899999999999877 88899999999998
Q ss_pred EEcCC
Q 017417 361 RVQAS 365 (372)
Q Consensus 361 ~i~~~ 365 (372)
.|.++
T Consensus 234 vV~~g 238 (304)
T 3eg4_A 234 FIGKS 238 (304)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 88754
No 89
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.86 E-value=1.5e-08 Score=92.36 Aligned_cols=76 Identities=26% Similarity=0.152 Sum_probs=54.5
Q ss_pred cEEcCCcEECCCCEE--CCCCEECCCcEECCCCEECCCcEEe-----------------ceEECCCCEECCCcEEE-ceE
Q 017417 290 ATIIGDVYVHPSAKI--HPTAKIGPNVSISANARIGAGVRLI-----------------SCIILDGVEIMENAVVT-NAI 349 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i--~~~~~i~~~s~ig~~~~i~~~~~i~-----------------~~~i~~~~~i~~~~~i~-~~~ 349 (372)
..+.+++.||+++.| +.+++|++++.||++|.|+.+++|. +++||++|.||.+|+|. ++.
T Consensus 164 v~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv~ 243 (313)
T 3q1x_A 164 IDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNII 243 (313)
T ss_dssp CEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSCE
T ss_pred eEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCcE
Confidence 345555666666666 4445555566666666666665553 24899999999999998 799
Q ss_pred ECCCCEECCCcEEcCC
Q 017417 350 VGWKSSIGRWSRVQAS 365 (372)
Q Consensus 350 i~~~~~i~~~~~i~~~ 365 (372)
||++|.||+++.|...
T Consensus 244 IG~~a~IGagsvV~~d 259 (313)
T 3q1x_A 244 VGSHVRIGANCWIDRD 259 (313)
T ss_dssp ECSSEEECTTCEECSC
T ss_pred ECCCCEECCCCEECCC
Confidence 9999999999998754
No 90
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.86 E-value=1.7e-08 Score=90.52 Aligned_cols=68 Identities=13% Similarity=0.085 Sum_probs=31.3
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-------------ceEECCCCEECCCcEEEc--------eEECCC
Q 017417 295 DVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-------------SCIILDGVEIMENAVVTN--------AIVGWK 353 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-------------~~~i~~~~~i~~~~~i~~--------~~i~~~ 353 (372)
++.|++++.|+++++|.+++.||++|.|++++.|. +++||+++.|+++|+|.. +.||++
T Consensus 35 ~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~ 114 (262)
T 2qia_A 35 HVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSD 114 (262)
T ss_dssp TEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSS
T ss_pred CCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECCC
Confidence 33444444444444444444444444444444442 344555555555555542 445554
Q ss_pred CEECCCcEE
Q 017417 354 SSIGRWSRV 362 (372)
Q Consensus 354 ~~i~~~~~i 362 (372)
+.|+.++.|
T Consensus 115 ~~Ig~~~~I 123 (262)
T 2qia_A 115 NLLMINAHI 123 (262)
T ss_dssp CEECTTCEE
T ss_pred cEEeeeeEE
Confidence 444444444
No 91
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.85 E-value=9e-09 Score=87.52 Aligned_cols=78 Identities=28% Similarity=0.367 Sum_probs=62.2
Q ss_pred CCcEEcCCcEECCCCEECCCCEECC---CcEECCCCEECCCcEEece------------EECCCCEECCCcEEEceEECC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGP---NVSISANARIGAGVRLISC------------IILDGVEIMENAVVTNAIVGW 352 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~---~s~ig~~~~i~~~~~i~~~------------~i~~~~~i~~~~~i~~~~i~~ 352 (372)
+.+.+.+++.||+++.|++++.|.+ ++.||++|.|++++.|..+ +||++|.|+++|.|.+++||+
T Consensus 30 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~ 109 (189)
T 3r1w_A 30 RSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGN 109 (189)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECS
T ss_pred CCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECC
Confidence 3455666788888888888888863 3588999999999988654 899999888888888888888
Q ss_pred CCEECCCcEEcCC
Q 017417 353 KSSIGRWSRVQAS 365 (372)
Q Consensus 353 ~~~i~~~~~i~~~ 365 (372)
+|.||.++.|.++
T Consensus 110 ~~~Ig~~~~i~~~ 122 (189)
T 3r1w_A 110 RVLIGMKSMIMDG 122 (189)
T ss_dssp SEEECTTCEECTT
T ss_pred CcEECCCCEEcCC
Confidence 8888888887654
No 92
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.85 E-value=1.9e-08 Score=87.70 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=43.1
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
..+.+++.+++++.|++++++.+++.||++|.|+.++.|. +|+|+++|.|++++.|. ++.|+++|.||.++.|.++
T Consensus 106 a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~ 183 (220)
T 4ea9_A 106 AVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPG 183 (220)
T ss_dssp CEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTT
T ss_pred CEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCC
Confidence 3444555566666666666665556666666666665554 45666666555555555 3555555555555555443
No 93
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.85 E-value=1.7e-08 Score=86.08 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=38.3
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEec-eEECCCCEECCCcEEE-ceEECCCC
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLIS-CIILDGVEIMENAVVT-NAIVGWKS 354 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~-~~~i~~~~ 354 (372)
.+.+.+++.|++++.|+++++|.+++.||++|.|++++.|.+ +.||++|.|++++.|. ++.|++++
T Consensus 9 ~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~ 76 (192)
T 3mqg_A 9 TAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDV 76 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTC
T ss_pred CcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCC
Confidence 345555666666666666666666666666666666666653 5666666665555553 34444333
No 94
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.85 E-value=8.7e-09 Score=86.38 Aligned_cols=78 Identities=27% Similarity=0.322 Sum_probs=65.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCC---cEECCCCEECCCcEEe-----ceEECCCCEECCCcEEEceEECCCCEECCC
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPN---VSISANARIGAGVRLI-----SCIILDGVEIMENAVVTNAIVGWKSSIGRW 359 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~---s~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~ 359 (372)
+.+.+.+++.|++++.|++++.+.++ +.||++|.|++++.|. +++|+++|.|+++|.|.+++|++++.||.+
T Consensus 21 ~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~ 100 (173)
T 1v3w_A 21 ENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGIS 100 (173)
T ss_dssp TTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTT
T ss_pred CCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCC
Confidence 34566677888888888888888753 8899999999999997 589999999999999988888888888888
Q ss_pred cEEcCC
Q 017417 360 SRVQAS 365 (372)
Q Consensus 360 ~~i~~~ 365 (372)
+.|.++
T Consensus 101 ~~i~~~ 106 (173)
T 1v3w_A 101 SVILDG 106 (173)
T ss_dssp CEECTT
T ss_pred CEEeCC
Confidence 887765
No 95
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.84 E-value=1.7e-08 Score=90.57 Aligned_cols=72 Identities=17% Similarity=0.088 Sum_probs=36.3
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-------------eceEECCCCEECCCcEEE--------ceE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-------------ISCIILDGVEIMENAVVT--------NAI 349 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-------------~~~~i~~~~~i~~~~~i~--------~~~ 349 (372)
.+.+++.|++++.|+++++|.+++.||++|.|++++.| .+++||+++.|+++|+|. .+.
T Consensus 33 ~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~ 112 (265)
T 4e6u_A 33 IIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTK 112 (265)
T ss_dssp EECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEE
T ss_pred EECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceE
Confidence 33344444444444444444445555555555555555 245555555555555554 245
Q ss_pred ECCCCEECCCcEE
Q 017417 350 VGWKSSIGRWSRV 362 (372)
Q Consensus 350 i~~~~~i~~~~~i 362 (372)
||+++.|+.++.|
T Consensus 113 IG~~~~I~~~~~I 125 (265)
T 4e6u_A 113 IGSHNLLMVNTHI 125 (265)
T ss_dssp ECSSCEECTTCEE
T ss_pred EccCcEEeeeeEE
Confidence 5554444444444
No 96
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.84 E-value=1.4e-08 Score=95.47 Aligned_cols=72 Identities=24% Similarity=0.275 Sum_probs=29.3
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-ceEECCCCEECCCcEE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRV 362 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 362 (372)
.+.+++.|++++.|+++++|++++.||++|.|+++|.|. ++.||++|.|+++++|. ++.||++|.|++++.|
T Consensus 127 ~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~I 200 (372)
T 3pmo_A 127 IVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVI 200 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEE
Confidence 333334444444444444444444444444444443333 33344444444344433 3334444444444433
No 97
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.83 E-value=9.6e-09 Score=88.59 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=65.9
Q ss_pred CCcEEcCCcEECCCCEECCCCEECC---CcEECCCCEECCCcEE--------------------------eceEECCCCE
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGP---NVSISANARIGAGVRL--------------------------ISCIILDGVE 338 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~---~s~ig~~~~i~~~~~i--------------------------~~~~i~~~~~ 338 (372)
..+.+.+++.||+++.|++++.|.+ +++||++|.|++++.| .+++|+++|.
T Consensus 63 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~ 142 (205)
T 3vbi_A 63 DFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVI 142 (205)
T ss_dssp TTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCE
T ss_pred CCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECCCCE
Confidence 3455666788888888888888853 3899999999999999 4689999999
Q ss_pred ECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 339 IMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 339 i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
|+.+|.|. ++.|++++.||+++.|...
T Consensus 143 IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~ 170 (205)
T 3vbi_A 143 IGAHSIIFPNVVIGEGVAVGAMSMVKES 170 (205)
T ss_dssp ECTTCEECSSCEECTTCEECTTCEECSC
T ss_pred ECCCCEEcCCCEECCCCEEcCCCEECCc
Confidence 99999998 8999999999999998754
No 98
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.83 E-value=1.7e-08 Score=87.64 Aligned_cols=67 Identities=22% Similarity=0.109 Sum_probs=46.1
Q ss_pred cEECCCCEECCCCEECC--------------CcEECCCCEECCCcEEec-eEECCCCEECCCcEEEceEECCCCEECCCc
Q 017417 296 VYVHPSAKIHPTAKIGP--------------NVSISANARIGAGVRLIS-CIILDGVEIMENAVVTNAIVGWKSSIGRWS 360 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~--------------~s~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~ 360 (372)
+.||+++.|++++.|.. ++.||++|.|+.++.|.+ ++|+++|.|+.+|+|.++.|++++.||+++
T Consensus 80 v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags 159 (213)
T 3kwd_A 80 FHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHV 159 (213)
T ss_dssp EEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSC
T ss_pred eEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCC
Confidence 45555555555555542 256677777777777765 777777777777777777777777777777
Q ss_pred EE
Q 017417 361 RV 362 (372)
Q Consensus 361 ~i 362 (372)
.|
T Consensus 160 ~V 161 (213)
T 3kwd_A 160 LI 161 (213)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 99
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.83 E-value=1.9e-08 Score=90.71 Aligned_cols=73 Identities=21% Similarity=0.197 Sum_probs=55.2
Q ss_pred EcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe---------ceEECCCCEECCCcEEE-ceEECCCCEECCCcE
Q 017417 292 IIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI---------SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSR 361 (372)
Q Consensus 292 ~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~---------~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~ 361 (372)
+..++.||+++.|+++++|+.++.||++|.|+.++.|. +++|+++|.||.+|+|. ++.||++++||.++.
T Consensus 130 i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsv 209 (276)
T 3gos_A 130 VNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVF 209 (276)
T ss_dssp ECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEECCCCEECCCCEECCCCE
Confidence 34456666666666666776667777777777777774 48888888888888887 888888888888888
Q ss_pred EcC
Q 017417 362 VQA 364 (372)
Q Consensus 362 i~~ 364 (372)
|.+
T Consensus 210 V~~ 212 (276)
T 3gos_A 210 IGQ 212 (276)
T ss_dssp ECT
T ss_pred ECC
Confidence 876
No 100
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.82 E-value=1.8e-08 Score=85.72 Aligned_cols=73 Identities=18% Similarity=0.116 Sum_probs=62.0
Q ss_pred cCCcEECCCCEECCCCEECC--CcEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEE-ceEE
Q 017417 293 IGDVYVHPSAKIHPTAKIGP--NVSISANARIGAGVRLI-------------------SCIILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~~--~s~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~~~i 350 (372)
..++.||+++.|+++++|.+ ++.||++|.|+++|.|. +++||++|.||.+|+|. ++.|
T Consensus 76 g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~I 155 (190)
T 3hjj_A 76 GYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSI 155 (190)
T ss_dssp STTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEE
Confidence 35688888888888888875 66899999999999993 36899999999999998 8999
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
|++++||+++.|...
T Consensus 156 G~~~vIgagsvV~~d 170 (190)
T 3hjj_A 156 GDNAVIASGAVVTKD 170 (190)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 999999999998643
No 101
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.82 E-value=2.8e-08 Score=84.84 Aligned_cols=77 Identities=26% Similarity=0.285 Sum_probs=42.4
Q ss_pred CcEEcCCcEECCCCEECCCCEEC---CCcEECCCCEECCCcEE----------------------------------ece
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIG---PNVSISANARIGAGVRL----------------------------------ISC 331 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~---~~s~ig~~~~i~~~~~i----------------------------------~~~ 331 (372)
.+.+.+++.||+++.|++++.|. ++..||++|.|++++.| .++
T Consensus 24 ~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~ 103 (194)
T 3tv0_A 24 ESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAM 103 (194)
T ss_dssp TSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCS
T ss_pred CCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeee
Confidence 34455555555555555555552 23445555555555544 344
Q ss_pred EECCCCEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 332 IILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 332 ~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
.|+++|.|+.+|+|. ++.||++|.||+++.|.+.
T Consensus 104 ~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~ 138 (194)
T 3tv0_A 104 KMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTF 138 (194)
T ss_dssp EECSSCEECTTCEECTTEEECSSCEECTTCEECCC
T ss_pred eecccceecceeeECCeEEECCCCEECCCCEECCC
Confidence 455555555666665 6666666666666666554
No 102
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.81 E-value=1.6e-08 Score=89.77 Aligned_cols=49 Identities=20% Similarity=0.144 Sum_probs=34.6
Q ss_pred cEECCCCEECCCcEEec-eEECCCCEECCCcEEEceEECCCCEECCCcEE
Q 017417 314 VSISANARIGAGVRLIS-CIILDGVEIMENAVVTNAIVGWKSSIGRWSRV 362 (372)
Q Consensus 314 s~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i 362 (372)
++||++|.|+.+|.|.+ ++|+++|.|+.+|.|.++.|++++.||+++.|
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 56666666666666665 77777777777777766777777777777776
No 103
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.80 E-value=2.8e-08 Score=90.95 Aligned_cols=70 Identities=24% Similarity=0.255 Sum_probs=45.2
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEECCCcEEec---------eEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 295 DVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLIS---------CIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
++.||+++.|..+++|++++.||++|.|+.++.|.+ ++|+++|.||.+|+|. ++.||++++||+++.|..
T Consensus 174 g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~ 253 (316)
T 3tk8_A 174 GAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQ 253 (316)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 444555555555555555555666666666655544 6777777777777776 677777777777777765
No 104
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.80 E-value=1.9e-08 Score=93.57 Aligned_cols=77 Identities=22% Similarity=0.221 Sum_probs=61.9
Q ss_pred CCCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-eceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 287 TKNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-ISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 287 ~~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
.+.+.+.+++.|++++.|+++++|++++.||++|.|++++.| .++.||++|.|+++++|. ++.||++|.|++++.|.
T Consensus 101 ~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I~ 179 (341)
T 3eh0_A 101 APSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVG 179 (341)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEEE
T ss_pred CCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEEC
Confidence 355677778888888888888888888888888888888888 578888888888888885 78888888888888774
No 105
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.78 E-value=2.7e-08 Score=85.01 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=59.6
Q ss_pred EcCCcEECCCCEECCCCEEC--CCcEECCCCEECCCcEEec-------------------eEECCCCEECCCcEEE-ceE
Q 017417 292 IIGDVYVHPSAKIHPTAKIG--PNVSISANARIGAGVRLIS-------------------CIILDGVEIMENAVVT-NAI 349 (372)
Q Consensus 292 ~~~~~~i~~~~~i~~~~~i~--~~s~ig~~~~i~~~~~i~~-------------------~~i~~~~~i~~~~~i~-~~~ 349 (372)
+..++.||+++.|++++++. ....||++|.||++|.|.. ++||++|.||.+|+|. ++.
T Consensus 73 ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~ 152 (195)
T 3nz2_A 73 FGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVT 152 (195)
T ss_dssp CSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCE
T ss_pred eCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCE
Confidence 34567888888888888884 3458899999999988743 5899999999999987 889
Q ss_pred ECCCCEECCCcEEcCC
Q 017417 350 VGWKSSIGRWSRVQAS 365 (372)
Q Consensus 350 i~~~~~i~~~~~i~~~ 365 (372)
||++++||+++.+...
T Consensus 153 IG~~~vIgagsvV~~d 168 (195)
T 3nz2_A 153 IGARSVVAANSVVNQD 168 (195)
T ss_dssp ECTTCEECTTCEECSC
T ss_pred ECCCCEECCCCEEccc
Confidence 9999999999888643
No 106
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.78 E-value=2.5e-08 Score=86.53 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=45.5
Q ss_pred cEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEc
Q 017417 296 VYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~ 363 (372)
+.|+.++.|++++.+.+++.||++|.||.++.|.+++|+++|.|+.++.|.++.|++++.|++++.+.
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQDVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEESCEECTTBEECTTCEEC
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEECCcEeCCCCEECCCcEEc
Confidence 55666666666666665566666677766666666667777777777766666666666666666665
No 107
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.78 E-value=4.7e-08 Score=91.88 Aligned_cols=75 Identities=24% Similarity=0.312 Sum_probs=42.1
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-------ceEECCCCEECCCcEEE-----------------
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-------SCIILDGVEIMENAVVT----------------- 346 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-------~~~i~~~~~i~~~~~i~----------------- 346 (372)
.+.+.++|++++.|+++++|.++++|+++|+||++|.|. +|.||++|.|+++++|.
T Consensus 139 ~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~ 218 (372)
T 3pmo_A 139 SVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIA 218 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECC
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceecc
Confidence 333334444444444444444444444444444444443 45666666777677664
Q ss_pred ---ceEECCCCEECCCcEEcCC
Q 017417 347 ---NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 347 ---~~~i~~~~~i~~~~~i~~~ 365 (372)
+++|+++|.||+++.|..+
T Consensus 219 ~~g~v~IGd~v~IGa~~~I~~g 240 (372)
T 3pmo_A 219 QIGGVTIGDDVEIGANTTIDRG 240 (372)
T ss_dssp CCCCEEECSSCEECTTCEEECC
T ss_pred ccCCeEECCCCEECCCcEEccC
Confidence 5778888888888888654
No 108
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.77 E-value=2.1e-08 Score=91.12 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=17.7
Q ss_pred CcEECCCCEECCCCEE--CCCcEECCCCEECCCcEEe-ceEECCCC
Q 017417 295 DVYVHPSAKIHPTAKI--GPNVSISANARIGAGVRLI-SCIILDGV 337 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i--~~~s~ig~~~~i~~~~~i~-~~~i~~~~ 337 (372)
++.|++++.|++++.| +.+++||++|+||++|.|. ++.|+.++
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~ 235 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKS 235 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC-
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCc
Confidence 3444444444444444 3344444444444444443 34444433
No 109
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.77 E-value=2e-08 Score=90.16 Aligned_cols=48 Identities=21% Similarity=0.250 Sum_probs=20.9
Q ss_pred cEECCCCEECCCcEEe-ceEECCCCEECCCcEEEceEECCCCEECCCcE
Q 017417 314 VSISANARIGAGVRLI-SCIILDGVEIMENAVVTNAIVGWKSSIGRWSR 361 (372)
Q Consensus 314 s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~ 361 (372)
++||++|.||.+++|. ++.||++|+|+.+++|...+-...+.+|.-++
T Consensus 217 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~kdVp~~svvvG~PAk 265 (287)
T 3mc4_A 217 PKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPAR 265 (287)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTEEEETTTTE
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCCEEccccCCCCEEEccCCE
Confidence 3444444444444444 24444444444444444433322333343333
No 110
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.77 E-value=2.1e-08 Score=90.01 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=44.9
Q ss_pred cEECCCCEECCCcEEec---------eEECCCCEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 314 VSISANARIGAGVRLIS---------CIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 314 s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
+.||++|.|+.++.|.. +.||++|.||.+|+| ++.||++|+||+|+.|..+
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-gVtIGd~~iIGAGSVVtkd 267 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL-GISLGDDCVVEAGLYVTAG 267 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE-CSCBCSSCEECTTCEECTT
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCEECCC
Confidence 67888888888888864 899999999999999 9999999999999998765
No 111
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.76 E-value=3.7e-08 Score=88.73 Aligned_cols=29 Identities=17% Similarity=0.016 Sum_probs=13.5
Q ss_pred CEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 337 VEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 337 ~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
++||++|.|. +|+|.+++.||+++.|..+
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgag 207 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMG 207 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 4444444444 4444444444444444444
No 112
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.76 E-value=6.6e-08 Score=86.81 Aligned_cols=56 Identities=27% Similarity=0.287 Sum_probs=28.1
Q ss_pred cEEcCCcEECCCCEECCCCEEC-------------CCcEECCCCEECCCcEEec--------eEECCCCEECCCcEE
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIG-------------PNVSISANARIGAGVRLIS--------CIILDGVEIMENAVV 345 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~-------------~~s~ig~~~~i~~~~~i~~--------~~i~~~~~i~~~~~i 345 (372)
+.+.+++.||+++.|++++.|+ .++.||++|.|+++++|.. ++||++|.|+.+++|
T Consensus 47 ~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I 123 (266)
T 3r0s_A 47 ARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHI 123 (266)
T ss_dssp CEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEE
T ss_pred eEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcceE
Confidence 3444445555555555555552 2555555555555555542 444444444444444
No 113
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.75 E-value=2.9e-08 Score=83.98 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=62.2
Q ss_pred cCCcEECCCCEECCCCEEC--CCcEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEE-ceEE
Q 017417 293 IGDVYVHPSAKIHPTAKIG--PNVSISANARIGAGVRLI-------------------SCIILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~--~~s~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~~~i 350 (372)
..++.||+++.|.+++++. .++.||++|.|+++|.|. ++.||++|.||.+|+|. ++.|
T Consensus 72 g~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~I 151 (185)
T 2p2o_A 72 GYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTI 151 (185)
T ss_dssp STTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEE
T ss_pred cCCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEE
Confidence 3567888888888888774 478899999999999983 57999999999999999 8999
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
|++++||+++.|...
T Consensus 152 G~~~vIgagsvV~~~ 166 (185)
T 2p2o_A 152 GDNAVIASGAVVTKD 166 (185)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECCC
Confidence 999999999998754
No 114
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.75 E-value=2.6e-08 Score=85.44 Aligned_cols=73 Identities=18% Similarity=0.108 Sum_probs=59.4
Q ss_pred cCCcEECCCCEECCCCEEC--CCcEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEE-ceEE
Q 017417 293 IGDVYVHPSAKIHPTAKIG--PNVSISANARIGAGVRLI-------------------SCIILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~--~~s~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~~~i 350 (372)
..++.||+++.|+++++|. ..+.||++|.||++|.|. +++||++|.||.+|+|. ++.|
T Consensus 72 g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~I 151 (199)
T 3ftt_A 72 GWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTI 151 (199)
T ss_dssp STTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEE
T ss_pred cCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEE
Confidence 3567888888888888884 347899999999999883 45799999999999888 8999
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
|++++||+++.+...
T Consensus 152 G~~~vIgagsvV~~d 166 (199)
T 3ftt_A 152 GEGSVIGAGSVVTKD 166 (199)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 999999999988653
No 115
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.75 E-value=2.1e-08 Score=89.34 Aligned_cols=71 Identities=27% Similarity=0.221 Sum_probs=62.1
Q ss_pred CcEECCCCEECCCCEECC---CcEECCCCEECCCcEEece--------------------EECCCCEECCCcEEE-ceEE
Q 017417 295 DVYVHPSAKIHPTAKIGP---NVSISANARIGAGVRLISC--------------------IILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~---~s~ig~~~~i~~~~~i~~~--------------------~i~~~~~i~~~~~i~-~~~i 350 (372)
++.||+++.|++++.|.+ ++.||++|.||++|.|.++ +|+++|.||.+|+|. ++.|
T Consensus 105 ~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~I 184 (252)
T 3jqy_B 105 KVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSV 184 (252)
T ss_dssp EEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEE
T ss_pred EEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEE
Confidence 578888888888888876 7899999999999999764 899999999999888 8999
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
++++.||+++.|...
T Consensus 185 G~~~~IgagsvV~~~ 199 (252)
T 3jqy_B 185 GSGSVIGYGSIVTKD 199 (252)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 999999999998654
No 116
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.74 E-value=4.9e-08 Score=88.96 Aligned_cols=66 Identities=20% Similarity=0.111 Sum_probs=30.4
Q ss_pred CCEECCCCEECCCcEECCCCEECCCcEEe-ceEECC--------CCEECCCcEEE-ceEECCCCEECCCcEEcCCC
Q 017417 301 SAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILD--------GVEIMENAVVT-NAIVGWKSSIGRWSRVQASS 366 (372)
Q Consensus 301 ~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~--------~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~ 366 (372)
++.|++++.|..++.||.+|.||++|.|. ++.|+. .++||++|.|. +|.|.+++.||+++.|..++
T Consensus 158 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgags 233 (304)
T 3eg4_A 158 GAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGV 233 (304)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCC
Confidence 33334444444334444444444444443 233433 34555555554 45555555555555555443
No 117
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.74 E-value=8.1e-08 Score=85.86 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=41.9
Q ss_pred CCcEEcCCcEECCCCEECCCCEE-------------CCCcEECCCCEECCCcEEe-------ceEECCCCEECCCcEEE-
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKI-------------GPNVSISANARIGAGVRLI-------SCIILDGVEIMENAVVT- 346 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i-------------~~~s~ig~~~~i~~~~~i~-------~~~i~~~~~i~~~~~i~- 346 (372)
+.+.+.+++.||+++.|++++.| ..++.||++|.|+++++|. +++||+++.|+++++|.
T Consensus 41 ~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~ 120 (259)
T 3hsq_A 41 GHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGH 120 (259)
T ss_dssp TTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCEECT
T ss_pred CCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcEECC
Confidence 34555666777777777777777 5677778888888888776 55666655555555544
Q ss_pred ceEEC
Q 017417 347 NAIVG 351 (372)
Q Consensus 347 ~~~i~ 351 (372)
++.|+
T Consensus 121 ~~~IG 125 (259)
T 3hsq_A 121 DCILG 125 (259)
T ss_dssp TCEEC
T ss_pred CcEEC
Confidence 33333
No 118
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.73 E-value=3.5e-08 Score=83.78 Aligned_cols=72 Identities=19% Similarity=0.145 Sum_probs=59.6
Q ss_pred CCcEECCCCEECCCCEECC--CcEECCCCEECCCcEE-------------------eceEECCCCEECCCcEEE-ceEEC
Q 017417 294 GDVYVHPSAKIHPTAKIGP--NVSISANARIGAGVRL-------------------ISCIILDGVEIMENAVVT-NAIVG 351 (372)
Q Consensus 294 ~~~~i~~~~~i~~~~~i~~--~s~ig~~~~i~~~~~i-------------------~~~~i~~~~~i~~~~~i~-~~~i~ 351 (372)
.++.||+++.|++++++.+ ...||++|.|+++|.| .+++||++|.||.+|+|. ++.||
T Consensus 75 ~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 154 (188)
T 3srt_A 75 YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIG 154 (188)
T ss_dssp TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEEC
T ss_pred CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEEC
Confidence 4677888888888877764 4488999999999998 368899999999999998 89999
Q ss_pred CCCEECCCcEEcCC
Q 017417 352 WKSSIGRWSRVQAS 365 (372)
Q Consensus 352 ~~~~i~~~~~i~~~ 365 (372)
++++||+++.|...
T Consensus 155 ~~~vIgagsvV~~d 168 (188)
T 3srt_A 155 DNVVIGAGSVVTKD 168 (188)
T ss_dssp SSEEECTTCEECSC
T ss_pred CCCEECCCCEECcc
Confidence 99999999988754
No 119
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.73 E-value=5.7e-08 Score=88.04 Aligned_cols=57 Identities=21% Similarity=0.235 Sum_probs=28.9
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-------------eceEECCCCEECCCcEEE
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-------------ISCIILDGVEIMENAVVT 346 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-------------~~~~i~~~~~i~~~~~i~ 346 (372)
+.+.+++.|++++.|+++++|.+++.||++|.|++++.| .+++||+++.|+++|+|.
T Consensus 47 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~ 116 (283)
T 4eqy_A 47 AIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIH 116 (283)
T ss_dssp CEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEE
T ss_pred CEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEc
Confidence 334444555555555555555545555555555555555 244555555555555554
No 120
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.73 E-value=8.1e-08 Score=86.17 Aligned_cols=56 Identities=20% Similarity=0.138 Sum_probs=29.1
Q ss_pred cEEcCCcEECCCCEECCCCEEC------------CCcEECCCCEECCCcEEe--------ceEECCCCEECCCcEE
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIG------------PNVSISANARIGAGVRLI--------SCIILDGVEIMENAVV 345 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~------------~~s~ig~~~~i~~~~~i~--------~~~i~~~~~i~~~~~i 345 (372)
+.+.+++.||+++.|++++.|+ .++.||++|.|+++++|. +++|+++|.|+.++.|
T Consensus 50 ~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I 125 (265)
T 4e6u_A 50 VVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHI 125 (265)
T ss_dssp CEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEE
T ss_pred cEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEE
Confidence 3444455555555555555551 245556666666666664 2555555544444444
No 121
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.73 E-value=5.2e-08 Score=82.19 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=60.4
Q ss_pred cCCcEECCCCEECCCCEEC--CCcEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEE-ceEE
Q 017417 293 IGDVYVHPSAKIHPTAKIG--PNVSISANARIGAGVRLI-------------------SCIILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~--~~s~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~~~i 350 (372)
..++.||+++.|.+++++. .++.||++|.|+++|.|. +++||++|.|+.+|+|. ++.|
T Consensus 70 g~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~I 149 (182)
T 1ocx_A 70 GYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTI 149 (182)
T ss_dssp STTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEE
Confidence 3467788888888887774 467889999999999883 58999999999999988 8999
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
|++++||+++.|...
T Consensus 150 G~~~vIgagsvV~~d 164 (182)
T 1ocx_A 150 GDNVVVASGAVVTKD 164 (182)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECCc
Confidence 999999999988654
No 122
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.73 E-value=5.4e-08 Score=83.07 Aligned_cols=56 Identities=25% Similarity=0.337 Sum_probs=43.1
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe----ceEECCCCEECCCcEEE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI----SCIILDGVEIMENAVVT 346 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~ 346 (372)
...+++.|+|++.|++++.|.+++.||++|.|++++.|. +..||++|.|+++|+|.
T Consensus 8 k~~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~ 67 (194)
T 3tv0_A 8 KTQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALII 67 (194)
T ss_dssp ----CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEE
T ss_pred hcCCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccc
Confidence 345678888888888888888888888888888888885 36788888888888773
No 123
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.73 E-value=7.6e-08 Score=88.04 Aligned_cols=66 Identities=18% Similarity=0.125 Sum_probs=33.0
Q ss_pred CCEECCCCEECCCcEECCCCEECCCcEEe-ceEECC--------CCEECCCcEEE-ceEECCCCEECCCcEEcCCC
Q 017417 301 SAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILD--------GVEIMENAVVT-NAIVGWKSSIGRWSRVQASS 366 (372)
Q Consensus 301 ~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~--------~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~ 366 (372)
++.|++++.|..++.||.+|.||++|.|. ++.|+. +++||++|.|. +|+|++++.||+++.|..++
T Consensus 174 g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgags 249 (316)
T 3tk8_A 174 GAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGV 249 (316)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCC
Confidence 33444444444444444444455554443 344444 45555555555 55555555555555555543
No 124
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.72 E-value=5.8e-08 Score=91.57 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=51.7
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE-eceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL-ISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.+.+.+++.|++++.|+++++|++++.||++|.|++++.| .+|.||++|.|+++|+|. ++.||++|.|++++.|.
T Consensus 129 ~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig 206 (374)
T 2iu8_A 129 PTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIG 206 (374)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEEE
T ss_pred CCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEEC
Confidence 34555566666666666666666666777777777777666 357777777777777774 67777777777777664
No 125
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.72 E-value=5.1e-08 Score=86.56 Aligned_cols=72 Identities=25% Similarity=0.378 Sum_probs=38.1
Q ss_pred EEcCCcEECCCCEECCCCEECCC----cEECCCCEECCCcEEe------------------------ceEECCCCEECCC
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPN----VSISANARIGAGVRLI------------------------SCIILDGVEIMEN 342 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~----s~ig~~~~i~~~~~i~------------------------~~~i~~~~~i~~~ 342 (372)
.+.+++.||+++.|++++.|.+. ++||++|.|+++|.|. +++||++|.|+++
T Consensus 73 ~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~ 152 (247)
T 1qre_A 73 SVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQ 152 (247)
T ss_dssp EEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTT
T ss_pred EEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCC
Confidence 33344555555555555555432 2555555555555553 2555666666666
Q ss_pred cEEEc-eEECCCCEECCCcEE
Q 017417 343 AVVTN-AIVGWKSSIGRWSRV 362 (372)
Q Consensus 343 ~~i~~-~~i~~~~~i~~~~~i 362 (372)
|.|.+ ++||++|.||.++.|
T Consensus 153 ~~I~~~~~Ig~~v~IG~~a~I 173 (247)
T 1qre_A 153 SQVHGPAAVGDDTFIGMQAFV 173 (247)
T ss_dssp CEEEEEEEECTTCEECTTCEE
T ss_pred CEEcCCcEECCCCEECCCCEE
Confidence 55554 555555555555544
No 126
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.71 E-value=3.2e-08 Score=94.26 Aligned_cols=75 Identities=25% Similarity=0.275 Sum_probs=65.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEceEECCCCEECCCcEE
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVTNAIVGWKSSIGRWSRV 362 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i 362 (372)
+.+.+.+++.|++++.|++++.+.+++.||++|.|++++.|. +++||++|.|+++|.|.+++|++++.|++++.|
T Consensus 237 ~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i 312 (401)
T 2ggo_A 237 DNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYV 312 (401)
T ss_dssp SSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEE
T ss_pred CCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceE
Confidence 345667788899999999999999999999999999999997 799999999999999999999998877665555
No 127
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.71 E-value=2.8e-08 Score=88.56 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=60.7
Q ss_pred CCcEECCCCEECCCCEEC--CCcEECCCCEECCCcEEe----ceEECCCCEECCCcEEEce-------------------
Q 017417 294 GDVYVHPSAKIHPTAKIG--PNVSISANARIGAGVRLI----SCIILDGVEIMENAVVTNA------------------- 348 (372)
Q Consensus 294 ~~~~i~~~~~i~~~~~i~--~~s~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~~------------------- 348 (372)
.++.|++++.|.+++.+. .++.||++|.|+.++.|. ++.||++|.|+++|.|.++
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 163 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD 163 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence 346788888888888874 378999999999999998 8999999999999998864
Q ss_pred -EECCCCEECCCcEEcCCC
Q 017417 349 -IVGWKSSIGRWSRVQASS 366 (372)
Q Consensus 349 -~i~~~~~i~~~~~i~~~~ 366 (372)
+|+++|.||.++.|.++.
T Consensus 164 v~Igd~v~IG~~a~I~~gv 182 (252)
T 3jqy_B 164 IIISSYVWVGRNVSIMKGV 182 (252)
T ss_dssp EEECSSCEECSSEEECTTC
T ss_pred eEEecCcEECCCCEECCCC
Confidence 888888888888887663
No 128
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.70 E-value=5.9e-08 Score=87.72 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=53.2
Q ss_pred CcEECCCCEECCCCEECC----CcEECCCCEECCCcEEec---------eEECCCCEECCCcEEEceEECCCCEECCCcE
Q 017417 295 DVYVHPSAKIHPTAKIGP----NVSISANARIGAGVRLIS---------CIILDGVEIMENAVVTNAIVGWKSSIGRWSR 361 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~----~s~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~ 361 (372)
.++|+.++.|+.++++.. ++.||++|.|++++.|.. ++||++|.||.+|+| ++.||++|+||.|+.
T Consensus 208 ~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~~iIGAGSV 286 (347)
T 3r5d_A 208 EGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI-GIPLGDRNIVEAGLY 286 (347)
T ss_dssp TCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE-CSCBCTTCEECTTCE
T ss_pred CCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCE
Confidence 334444444444444432 378888888888888864 799999999999999 999999999999999
Q ss_pred EcCC
Q 017417 362 VQAS 365 (372)
Q Consensus 362 i~~~ 365 (372)
|..+
T Consensus 287 Vtkd 290 (347)
T 3r5d_A 287 ITAG 290 (347)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8765
No 129
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.69 E-value=9.7e-08 Score=83.18 Aligned_cols=64 Identities=19% Similarity=0.146 Sum_probs=50.7
Q ss_pred CEECCCCEECCCcEECCCCEECCCcEE------------------------------------eceEECCCCEECCCcEE
Q 017417 302 AKIHPTAKIGPNVSISANARIGAGVRL------------------------------------ISCIILDGVEIMENAVV 345 (372)
Q Consensus 302 ~~i~~~~~i~~~s~ig~~~~i~~~~~i------------------------------------~~~~i~~~~~i~~~~~i 345 (372)
+.|++++++++++.||++|.|+++++| .+++||++|.||.+|+|
T Consensus 55 ~vI~~~~~Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~IG~~v~IG~~a~I 134 (220)
T 4hur_A 55 QVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVTI 134 (220)
T ss_dssp GEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSSCEECTTCEE
T ss_pred eEEeCCCEECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccccccccccccccCCeEECCCcEECCCCEE
Confidence 445555556667888888888888875 24789999999999999
Q ss_pred E-ceEECCCCEECCCcEEcCC
Q 017417 346 T-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 346 ~-~~~i~~~~~i~~~~~i~~~ 365 (372)
. ++.||++++||+++.|...
T Consensus 135 ~~gv~IG~gavIgagsvV~~d 155 (220)
T 4hur_A 135 MPGVKIGDGAIIAAEAVVTKN 155 (220)
T ss_dssp CTTCEECTTCEECTTCEECSC
T ss_pred eCCCEECCCCEEcCCCEEccc
Confidence 8 8999999999999988643
No 130
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.68 E-value=1.3e-07 Score=84.77 Aligned_cols=53 Identities=23% Similarity=0.249 Sum_probs=23.8
Q ss_pred cCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEE
Q 017417 293 IGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVV 345 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 345 (372)
.+++.|++++.|++++.+.+++.||++|.|++++.|. ++.||++|.|+++|+|
T Consensus 15 ~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 68 (262)
T 2qia_A 15 EEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASI 68 (262)
T ss_dssp CTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEE
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEE
Confidence 3334444444444444444444444444444444443 3444444444444444
No 131
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.68 E-value=1.1e-07 Score=85.62 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=18.7
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEE
Q 017417 291 TIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRL 328 (372)
Q Consensus 291 ~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i 328 (372)
.+.+++.||+++.|+++++|.+++.||++|.|++++.|
T Consensus 27 ~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 27 VIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp EECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEE
Confidence 33444444444444444444444555555555555554
No 132
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.68 E-value=1.2e-07 Score=86.75 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=56.5
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-----ceEECCCCEECCCcEEE--------------ceE
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-----SCIILDGVEIMENAVVT--------------NAI 349 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~--------------~~~ 349 (372)
.+.+.+++.|++++.|+++++|.+++.||++|.|++++.|. +++||+++.|+++|.|. ...
T Consensus 31 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~Ig~~~q~~~~~~~~~~~i~ 110 (305)
T 3t57_A 31 YCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLC 110 (305)
T ss_dssp TCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEEEECCCCTTCCTTCCEEEE
T ss_pred CCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEeCccccccceecCCCceEE
Confidence 44555666777777777777777777788888888888776 58888888888888883 256
Q ss_pred ECCCCEECCCcEEcCC
Q 017417 350 VGWKSSIGRWSRVQAS 365 (372)
Q Consensus 350 i~~~~~i~~~~~i~~~ 365 (372)
||+++.|++++.|+.+
T Consensus 111 IG~~~~I~~~~~I~~g 126 (305)
T 3t57_A 111 IGNNNEIREFCSIHRS 126 (305)
T ss_dssp ECSSCEECTTCEEECC
T ss_pred ECCCcccCceEEEeec
Confidence 7777777777777654
No 133
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.67 E-value=7.4e-08 Score=85.80 Aligned_cols=26 Identities=8% Similarity=0.020 Sum_probs=21.6
Q ss_pred CeEE--EEcCCeeecCChHHHHHHHHhc
Q 017417 108 SHIF--LLNCDVCCSFPLPEMLDAHRNY 133 (372)
Q Consensus 108 ~~vl--v~~gD~i~~~~l~~~l~~~~~~ 133 (372)
|++| ++++|.+...+|.+.+..|...
T Consensus 20 EP~L~~~l~~~IL~~~~l~~aLa~~la~ 47 (267)
T 1ssq_A 20 EPMLASFFHSTILKHQNLGGALSYLLAN 47 (267)
T ss_dssp CHHHHHHHHHHTTTSSSHHHHHHHHHHH
T ss_pred CCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 5688 8899988888999999888664
No 134
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.64 E-value=8.8e-08 Score=87.23 Aligned_cols=42 Identities=31% Similarity=0.366 Sum_probs=21.9
Q ss_pred CCcEECCCCEECCCCEE--CCCcEECCCCEECCCcEEe-ceEECC
Q 017417 294 GDVYVHPSAKIHPTAKI--GPNVSISANARIGAGVRLI-SCIILD 335 (372)
Q Consensus 294 ~~~~i~~~~~i~~~~~i--~~~s~ig~~~~i~~~~~i~-~~~i~~ 335 (372)
.++.|++++.|++++.| +.+++||++|+||++|.|. ++.|++
T Consensus 162 ~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~ 206 (313)
T 3q1x_A 162 TSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGA 206 (313)
T ss_dssp HCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEEC
T ss_pred CCeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeC
Confidence 34555555555555555 3345555555555555554 344544
No 135
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.63 E-value=4.6e-08 Score=94.63 Aligned_cols=69 Identities=12% Similarity=0.117 Sum_probs=62.3
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEE-c----eEECCCCEECCCcEEc
Q 017417 294 GDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVT-N----AIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 294 ~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~----~~i~~~~~i~~~~~i~ 363 (372)
+++.||+++.|+++|+|. +++||++|.|+.++.|.+++||++|.||.+|.|. + +.|+++|.||.++.|.
T Consensus 307 ~~v~IG~~~~I~~~~~I~-~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 307 DNAWMGKGSNAQENCYII-NSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp EEEEECTTCEECTTCEEE-EEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred eceEecCCCEECCCceEe-ceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 556777888888888887 8899999999999999999999999999999999 5 5999999999999998
No 136
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.62 E-value=1.2e-07 Score=85.20 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=22.2
Q ss_pred CeEE--EEcCCeeecCChHHHHHHHHhc
Q 017417 108 SHIF--LLNCDVCCSFPLPEMLDAHRNY 133 (372)
Q Consensus 108 ~~vl--v~~gD~i~~~~l~~~l~~~~~~ 133 (372)
|++| ++++|.+...+|.+.+..+...
T Consensus 40 EP~L~~~l~~~IL~~~~l~~aLa~~La~ 67 (289)
T 1t3d_A 40 EPMLASFYHATLLKHENLGSALSYMLAN 67 (289)
T ss_dssp CGGGHHHHHHHTTTCSSHHHHHHHHHHH
T ss_pred CCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 5688 8999999889999999988764
No 137
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.62 E-value=1.6e-07 Score=81.35 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=28.0
Q ss_pred ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 330 SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 330 ~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
+++||++|.||.+|+|. ++.||++++||+++.|..
T Consensus 111 ~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~ 146 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTK 146 (212)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CeEECCCCEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 46888888888888888 788888888888888763
No 138
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.62 E-value=1.5e-07 Score=84.70 Aligned_cols=68 Identities=19% Similarity=0.125 Sum_probs=32.4
Q ss_pred cEECCCCEECCCCEECCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 296 VYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.|++++.|+++++|.+++.||+++.|+.++.|. ++.|++++.|+.++.|. ++.|++++.|++++.|.
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~ 140 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVG 140 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEEC
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEEC
Confidence 4444444444444444444444444444444443 45555555555444444 44444444444444443
No 139
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.62 E-value=1.6e-07 Score=80.49 Aligned_cols=73 Identities=23% Similarity=0.179 Sum_probs=57.8
Q ss_pred cCCcEECCCCEECCCCEECC--CcEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEE-ceEE
Q 017417 293 IGDVYVHPSAKIHPTAKIGP--NVSISANARIGAGVRLI-------------------SCIILDGVEIMENAVVT-NAIV 350 (372)
Q Consensus 293 ~~~~~i~~~~~i~~~~~i~~--~s~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~~~i 350 (372)
..++.||+++.|..++.+.+ .+.||++|.|+++|.|. +++||++|.||.+|+|. ++.|
T Consensus 73 g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~I 152 (203)
T 1krr_A 73 GSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTI 152 (203)
T ss_dssp STTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEE
Confidence 35677788888877777653 47888888888888773 36888888898888888 7888
Q ss_pred CCCCEECCCcEEcCC
Q 017417 351 GWKSSIGRWSRVQAS 365 (372)
Q Consensus 351 ~~~~~i~~~~~i~~~ 365 (372)
|++++||+++.+...
T Consensus 153 G~~~vIgagsvV~~d 167 (203)
T 1krr_A 153 GDNSVIGAGSIVTKD 167 (203)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECCC
Confidence 889999988888653
No 140
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.61 E-value=7.8e-08 Score=86.96 Aligned_cols=73 Identities=15% Similarity=0.071 Sum_probs=43.6
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-----ceEECCCCEECCCcEEEc---------eEECCCCE
Q 017417 290 ATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-----SCIILDGVEIMENAVVTN---------AIVGWKSS 355 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------~~i~~~~~ 355 (372)
..+.+.++|.+++.|+++++|.++++|+.++.||++|.|. ++.||++|.|+++|+|.+ +.||++|.
T Consensus 185 v~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~ 264 (347)
T 3r5d_A 185 VRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCL 264 (347)
T ss_dssp EEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTTCE
T ss_pred cEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCCCE
Confidence 3444444444444444444444444444444444444432 478888888888888874 68888888
Q ss_pred ECCCcEE
Q 017417 356 IGRWSRV 362 (372)
Q Consensus 356 i~~~~~i 362 (372)
||.++.|
T Consensus 265 IGAnAtI 271 (347)
T 3r5d_A 265 IGANAGI 271 (347)
T ss_dssp ECTTCEE
T ss_pred ECCCCEE
Confidence 8888777
No 141
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.60 E-value=6.3e-08 Score=93.82 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEE
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRV 362 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 362 (372)
+.+.+.+++.||+++.|+++++|. ++.||++|.|++++.|.+++|+++|.|+++|+|. ++.|++++.||+++.|
T Consensus 279 ~~~~i~~~~~ig~~~~I~~~~~i~-~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i 353 (459)
T 4fce_A 279 TNVIIEGHVILGDRVRIGTGCVLK-NCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEI 353 (459)
T ss_dssp TTEEEEEEEEECTTCEECTTCEEE-SCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEE
T ss_pred CCeeeccceEECCCCEECCCCEEe-ccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEE
Confidence 456666678888888888888887 6888888888888888888888888888888887 7777777666666554
No 142
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.60 E-value=5.1e-08 Score=93.47 Aligned_cols=73 Identities=22% Similarity=0.257 Sum_probs=63.9
Q ss_pred cEEcCCcEECCCCEECC-----CCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEEceEECCCCEECCCcEEcC
Q 017417 290 ATIIGDVYVHPSAKIHP-----TAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 290 ~~~~~~~~i~~~~~i~~-----~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~ 364 (372)
+.+.+.+.+++++.+++ ++.+. ++.||++|.| .+++|.+|+||++|+|+++|.|.+|+|++++.||+++.|.+
T Consensus 297 ~~i~~~~~i~~~~~i~~~~~~~~~~i~-~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~ 374 (420)
T 3brk_X 297 WPIWTYAEITPPAKFVHDDEDRRGSAV-SSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSN 374 (420)
T ss_dssp SCCCCCCCCCCCCEEECBCSSCBCEEE-SCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEE
T ss_pred CceeeccccCCCcEEecccccCCcEec-CCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEec
Confidence 34455677888888887 77774 9999999999 89999999999999999999999999999999999988754
No 143
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.60 E-value=9.4e-08 Score=92.89 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=49.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEE
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRV 362 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 362 (372)
+.+.+.+++.|++++.|++++.|. ++.||++|.|+ ++.|.+|+||++|.|+++|.|. +++|++++.||.++.|
T Consensus 285 ~~~~i~~~~~ig~~~~I~~~~~i~-~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i 358 (468)
T 1hm9_A 285 ANVILKGQTKIGAETVLTNGTYVV-DSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEV 358 (468)
T ss_dssp SSCEEESSCEECTTCEECTTCEEE-SCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEE
T ss_pred CCcEECCCCEECCCCEECCCCEEe-ccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEE
Confidence 344556667777777777777765 67777777777 7777777777777777777776 6666666655554444
No 144
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.59 E-value=6.2e-08 Score=93.77 Aligned_cols=75 Identities=20% Similarity=0.224 Sum_probs=58.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
+.+.+.+++.||+++.|++++.|. ++.||++|.|++++.|.+++|+++|.|+++|+|. ++.|++++.||+++.|.
T Consensus 276 ~~~~i~~~~~Ig~~~~I~~~~~i~-~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~ 351 (456)
T 2v0h_A 276 VNVIIEGNVKLGDRVKIGTGCVLK-NVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIK 351 (456)
T ss_dssp SSEEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred CCcEEcCCcEECCCCEECCCCEEE-eEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEe
Confidence 345666778888888888888887 8888999999988888888888888888888887 67777766666655553
No 145
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.54 E-value=2.4e-07 Score=83.21 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=48.0
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEe-----ceEECCCCEECCCcEEEc---------eEECCCC
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLI-----SCIILDGVEIMENAVVTN---------AIVGWKS 354 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------~~i~~~~ 354 (372)
...+.+.++|.+++.|+++++|+++++|..++.++.+|.|. ++.||++|.|+++|+|.. +.||++|
T Consensus 161 gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv 240 (332)
T 3fsy_A 161 GVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRC 240 (332)
T ss_dssp TCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTC
T ss_pred CcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCC
Confidence 34455555555555555555555555555555555555552 467888888888888774 7788888
Q ss_pred EECCCcEE
Q 017417 355 SIGRWSRV 362 (372)
Q Consensus 355 ~i~~~~~i 362 (372)
.||.++.|
T Consensus 241 ~IGanAtI 248 (332)
T 3fsy_A 241 LLGANSGL 248 (332)
T ss_dssp EECTTCEE
T ss_pred EECCCCEE
Confidence 88877777
No 146
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.52 E-value=2.1e-07 Score=91.24 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=31.0
Q ss_pred CcEECCCCEECCCcEEec--------eEECCCCEECCCcEEE-ceEECCCCEECCCcEEc
Q 017417 313 NVSISANARIGAGVRLIS--------CIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQ 363 (372)
Q Consensus 313 ~s~ig~~~~i~~~~~i~~--------~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 363 (372)
++.||.+|.||.+|.+.| ++||++|.||.+|.|. .+.||+++.||+++.|.
T Consensus 386 d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~ 445 (501)
T 3st8_A 386 DADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVR 445 (501)
T ss_dssp SEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEEC
T ss_pred CceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEEC
Confidence 455666666666655532 5666666666666665 56666666666666654
No 147
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.52 E-value=2e-07 Score=85.90 Aligned_cols=57 Identities=26% Similarity=0.267 Sum_probs=43.0
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCCEECCCcEEeceEECCCCEECCCcEE
Q 017417 288 KNATIIGDVYVHPSAKIHPTAKIGPNVSISANARIGAGVRLISCIILDGVEIMENAVV 345 (372)
Q Consensus 288 ~~~~~~~~~~i~~~~~i~~~~~i~~~s~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i 345 (372)
+.+.+.+++.|++++.|++++.|. +|+|+++++|+++++|.++.|+++|.|+.++++
T Consensus 76 ~~~~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i 132 (334)
T 2pig_A 76 GNARITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARV 132 (334)
T ss_dssp TTCEEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEE
T ss_pred CCcEEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEE
Confidence 456777778888888888888887 888999999998988887766665554444433
No 148
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.51 E-value=3.5e-07 Score=78.30 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=5.0
Q ss_pred EEcCCcEECCCCE
Q 017417 291 TIIGDVYVHPSAK 303 (372)
Q Consensus 291 ~~~~~~~i~~~~~ 303 (372)
.+..++.|++++.
T Consensus 76 ~IG~~~~I~~~~~ 88 (199)
T 3ftt_A 76 KLGKNVYVNTNCY 88 (199)
T ss_dssp EECSSEEECTTEE
T ss_pred EECCCeEECCCeE
Confidence 3333333333333
No 149
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.50 E-value=3.6e-07 Score=79.22 Aligned_cols=69 Identities=12% Similarity=0.145 Sum_probs=53.0
Q ss_pred cEECCCCEECCCCEEC---CCcEECCCCEECCCcEEec--------------------eEECCCCEECCCcEEE-ceEEC
Q 017417 296 VYVHPSAKIHPTAKIG---PNVSISANARIGAGVRLIS--------------------CIILDGVEIMENAVVT-NAIVG 351 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~---~~s~ig~~~~i~~~~~i~~--------------------~~i~~~~~i~~~~~i~-~~~i~ 351 (372)
+.||+++.|++.+++. .++.||++|.|++++.|.+ ++|+++|.|+.+|+|. ++.|+
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig 159 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIP 159 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEEC
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEEC
Confidence 6677777777744442 3678888888888888875 3888888888888887 78888
Q ss_pred CCCEECCCcEEcC
Q 017417 352 WKSSIGRWSRVQA 364 (372)
Q Consensus 352 ~~~~i~~~~~i~~ 364 (372)
++++|++++.+..
T Consensus 160 ~~~vIgagsvV~~ 172 (215)
T 2wlg_A 160 NNVVVGSHTVLYK 172 (215)
T ss_dssp SSCEECTTCEECS
T ss_pred CCCEECCCCEEcC
Confidence 8888888888764
No 150
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.47 E-value=5e-07 Score=84.01 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=42.2
Q ss_pred ECCCcEECCCCEECCCcEE----ec-----eEECCCCEECCCcEEEceEECCCCEECCCcEEcCC
Q 017417 310 IGPNVSISANARIGAGVRL----IS-----CIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 310 i~~~s~ig~~~~i~~~~~i----~~-----~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 365 (372)
|+.+++||++|.|+.++.| .+ ++||++|.||.+|+ .++.||++|+||+++.|..+
T Consensus 261 Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdgavIGAGsVVt~d 324 (387)
T 2rij_A 261 ISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDNCIVDAGIAVLEG 324 (387)
T ss_dssp ECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTTCEECTTCEECTT
T ss_pred ECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCCCEECCCCEECCC
Confidence 3445667777777777753 22 78999999999888 88889999999999888765
No 151
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.42 E-value=4.3e-06 Score=80.45 Aligned_cols=182 Identities=16% Similarity=0.181 Sum_probs=108.7
Q ss_pred CCCeeEEEEeCCCCCCCccccCcccCCCCCcccC-CcchhhhhHhhcce----------EEEEcc-cchHHHHHHHhhcc
Q 017417 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR----------IYLVGF-YEEREFALYVSSIS 73 (372)
Q Consensus 6 ~~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~-g~pli~~~l~~l~~----------i~vv~~-~~~~~i~~~~~~~~ 73 (372)
..++.+|+|||| .||||+- ..||.++|+. |++++++.++++.. ++|.++ ...+...++++++
T Consensus 125 l~kvavvlLaGG--lGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~- 198 (528)
T 3r3i_A 125 LNKLVVVKLNGG--LGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKY- 198 (528)
T ss_dssp CTTEEEEEECCC--BCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGG-
T ss_pred cCceEEEEeCCC--CccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhc-
Confidence 468999999999 9999976 7899999996 89999999887654 445444 4556677777764
Q ss_pred CCCCeeEEEecCC---------------------------cccCh--HHHHHH---HHHHhhccCCCeEEEEcCCeeecC
Q 017417 74 NELRIPVRYLRED---------------------------KPHGS--AGALYN---FRDLIMEDNPSHIFLLNCDVCCSF 121 (372)
Q Consensus 74 ~~~~~~i~~~~~~---------------------------~~~g~--~~al~~---~~~~l~~~~~~~vlv~~gD~i~~~ 121 (372)
..++..+.+..|. .+.|. ....+. .++.+....-+++.+.+.|.+...
T Consensus 199 ~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~ 278 (528)
T 3r3i_A 199 NHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGAT 278 (528)
T ss_dssp TTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCC
T ss_pred CccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccc
Confidence 3334444433221 12333 222222 234444444579999999998743
Q ss_pred ChHHHHHHHHhc----CCceEEEEEecCCcccccceEEEEcCCCC--ceeEeeecCCC--------cccCceeeeEEEeC
Q 017417 122 PLPEMLDAHRNY----GGMGTILVIKVSAESASQFGELVADPDTN--ELLHYTEKPET--------FVSDLINCGVYVFT 187 (372)
Q Consensus 122 ~l~~~l~~~~~~----~~~~~i~~~~~~~~~~~~~~~v~~~~~~~--~v~~i~ek~~~--------~~~~~~~~Giy~~~ 187 (372)
.-..++..+... ++++.+-+.+.. .....-|.+... +| ++.++.+-|.. ..-.+.++...+|+
T Consensus 279 vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt-~~dek~Gvl~~~--dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~ 355 (528)
T 3r3i_A 279 VDLYILNHLMNPPNGKRCEFVMEVTNKT-RADVKGGTLTQY--EGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWIS 355 (528)
T ss_dssp CCHHHHHHHSSCSSSCCCSEEEEECCCC-TTCCSSCEEECS--SSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEE
T ss_pred cCHHHHHHHHhcccccCCcEEEEEeEcc-ccCCcccEEEEE--CCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEE
Confidence 323355555554 566655443321 111223444432 34 34444443211 12345788899999
Q ss_pred HhhHHHhhh
Q 017417 188 PDIFNAIQG 196 (372)
Q Consensus 188 ~~~~~~l~~ 196 (372)
-++++.+.+
T Consensus 356 L~~L~~v~~ 364 (528)
T 3r3i_A 356 LAAVKRLQE 364 (528)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 152
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.42 E-value=5.3e-07 Score=78.16 Aligned_cols=70 Identities=16% Similarity=0.165 Sum_probs=52.8
Q ss_pred cEECCCCEECCCCEECC---CcEECCCCEECCCcEE----eceEECCCCEECCCcEEEc--------------------e
Q 017417 296 VYVHPSAKIHPTAKIGP---NVSISANARIGAGVRL----ISCIILDGVEIMENAVVTN--------------------A 348 (372)
Q Consensus 296 ~~i~~~~~i~~~~~i~~---~s~ig~~~~i~~~~~i----~~~~i~~~~~i~~~~~i~~--------------------~ 348 (372)
+.|++++.|++++.+.. ++.||++|.|++++.+ .+++||++|.|+++|+|.+ +
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 77888888888877753 4888888888885544 4678888888888888875 3
Q ss_pred EECCCCEECCCcEEcCC
Q 017417 349 IVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 349 ~i~~~~~i~~~~~i~~~ 365 (372)
+|+++|.||.++.|.++
T Consensus 139 ~Igd~v~IG~~~~I~~g 155 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKG 155 (215)
T ss_dssp EECTTCEECTTCEECTT
T ss_pred EECCCcEECCCCEECCC
Confidence 77777777777777655
No 153
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.41 E-value=9.5e-07 Score=74.87 Aligned_cols=36 Identities=39% Similarity=0.433 Sum_probs=17.2
Q ss_pred CcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEce
Q 017417 313 NVSISANARIGAGVRLI-SCIILDGVEIMENAVVTNA 348 (372)
Q Consensus 313 ~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 348 (372)
++.||++|.||.+|+|. ++.||++|+|+.+++|...
T Consensus 132 ~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 132 PVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp CEEECSSCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred CcEECCCcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 44455555555554443 3444444444444444433
No 154
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.40 E-value=6.2e-07 Score=75.55 Aligned_cols=66 Identities=23% Similarity=0.229 Sum_probs=32.3
Q ss_pred CcEECCCCEECCCCEEC------------------CCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEceEECCCCE
Q 017417 295 DVYVHPSAKIHPTAKIG------------------PNVSISANARIGAGVRLI-SCIILDGVEIMENAVVTNAIVGWKSS 355 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~------------------~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~i~~~~~ 355 (372)
++.||.++.|++++.|. .++.||++|.||.+++|. ++.||++|+|+.+++|. ++
T Consensus 92 ~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~~~vIgagsvV~-----~d-- 164 (182)
T 1ocx_A 92 PIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVT-----KD-- 164 (182)
T ss_dssp CEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC-----SC--
T ss_pred ceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEECCCCEECCCCEEC-----Cc--
Confidence 45556666666666552 244555555555554443 24444444444444443 33
Q ss_pred ECCCcEEcCCCC
Q 017417 356 IGRWSRVQASSK 367 (372)
Q Consensus 356 i~~~~~i~~~~~ 367 (372)
|.+++.+.+.+.
T Consensus 165 ip~~~vv~G~Pa 176 (182)
T 1ocx_A 165 VPDNVVVGGNPA 176 (182)
T ss_dssp BCSSEEEETTTT
T ss_pred CCCCcEEEcccc
Confidence 455555555443
No 155
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.38 E-value=1.7e-06 Score=75.02 Aligned_cols=35 Identities=17% Similarity=0.062 Sum_probs=27.9
Q ss_pred ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 330 SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 330 ~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
+++|+++|.||.+|+|. ++.||+++.||+++.+..
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 37788888888888888 788888888888888754
No 156
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.33 E-value=2.3e-07 Score=86.30 Aligned_cols=72 Identities=25% Similarity=0.272 Sum_probs=37.4
Q ss_pred CcEEcCCcEECCCCEECCCCEECCC-cEECCCCE-ECCCcEEe-----ceEECCCCEECCCcEEE----c-----eEECC
Q 017417 289 NATIIGDVYVHPSAKIHPTAKIGPN-VSISANAR-IGAGVRLI-----SCIILDGVEIMENAVVT----N-----AIVGW 352 (372)
Q Consensus 289 ~~~~~~~~~i~~~~~i~~~~~i~~~-s~ig~~~~-i~~~~~i~-----~~~i~~~~~i~~~~~i~----~-----~~i~~ 352 (372)
...+.+++.|++++.|+++++|.++ ++|+.++. ||+ |.|. +|+||++|.|+++++|. + ++||+
T Consensus 217 gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~nv~vIG~-~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGd 295 (387)
T 2rij_A 217 NTRILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGA-CMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGK 295 (387)
T ss_dssp TCEESCGGGBBTTCBCCTTCEECSSSCEECTTCEESSC-CEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECT
T ss_pred CEEEcCCCEECCCeEEcCCCEEeCCeeEECCCcEEECC-EEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeC
Confidence 3445555555555555555555553 55555555 555 4442 35555555555555422 1 45555
Q ss_pred CCEECCCcE
Q 017417 353 KSSIGRWSR 361 (372)
Q Consensus 353 ~~~i~~~~~ 361 (372)
+|.||.++.
T Consensus 296 nv~IGagAv 304 (387)
T 2rij_A 296 ACLLGANSV 304 (387)
T ss_dssp TCEECTTCE
T ss_pred CCEECCCCc
Confidence 555555444
No 157
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.26 E-value=1.4e-06 Score=73.55 Aligned_cols=54 Identities=31% Similarity=0.340 Sum_probs=35.1
Q ss_pred CCcEECCCCEECCCCEE------------------CCCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEc
Q 017417 294 GDVYVHPSAKIHPTAKI------------------GPNVSISANARIGAGVRLI-SCIILDGVEIMENAVVTN 347 (372)
Q Consensus 294 ~~~~i~~~~~i~~~~~i------------------~~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 347 (372)
+++.||.++.|+++|.| ..++.||++|.||.+++|. ++.||++|+|+.+++|..
T Consensus 93 ~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~~ 165 (185)
T 2p2o_A 93 CEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTK 165 (185)
T ss_dssp SCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEECCCCEECCCCEECC
Confidence 45677777777777777 2356777777777776665 466666666666666654
No 158
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.21 E-value=4e-06 Score=80.98 Aligned_cols=53 Identities=23% Similarity=0.233 Sum_probs=45.0
Q ss_pred CcEECCCCEECCCCEECCCcEECCC------------------CEECCCcEEeceEECCCCEECCCcEEEc
Q 017417 295 DVYVHPSAKIHPTAKIGPNVSISAN------------------ARIGAGVRLISCIILDGVEIMENAVVTN 347 (372)
Q Consensus 295 ~~~i~~~~~i~~~~~i~~~s~ig~~------------------~~i~~~~~i~~~~i~~~~~i~~~~~i~~ 347 (372)
++.||+++.|++++.|...++++.+ +.||.++.|.+|+|+++|.||++|.|.+
T Consensus 346 ~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~ 416 (451)
T 1yp2_A 346 HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIIN 416 (451)
T ss_dssp SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECC
T ss_pred ccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeC
Confidence 7888999999999999844444542 9999999999999999999999999884
No 159
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.19 E-value=5.3e-06 Score=71.37 Aligned_cols=35 Identities=23% Similarity=0.165 Sum_probs=26.6
Q ss_pred ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 330 SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 330 ~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
+++||++|.||.+|.|. ++.||++++|++++.+..
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~ 148 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVK 148 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 36777888888888777 677888888888877754
No 160
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.18 E-value=4.6e-06 Score=71.32 Aligned_cols=69 Identities=19% Similarity=0.172 Sum_probs=42.5
Q ss_pred ECCCCEECCCCEECCCcEECC--CCEECCCcEEe-ceEEC------------------CCCEECCCcEEE-ceEECCCCE
Q 017417 298 VHPSAKIHPTAKIGPNVSISA--NARIGAGVRLI-SCIIL------------------DGVEIMENAVVT-NAIVGWKSS 355 (372)
Q Consensus 298 i~~~~~i~~~~~i~~~s~ig~--~~~i~~~~~i~-~~~i~------------------~~~~i~~~~~i~-~~~i~~~~~ 355 (372)
++.++.|++++.+..++.|.. .++||++|.|. +|.|. .+++||++|.|. +++|..++.
T Consensus 72 ~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~ 151 (203)
T 1krr_A 72 YGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVT 151 (203)
T ss_dssp CSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCE
T ss_pred eCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeE
Confidence 455666666666665555543 35666666665 35442 235667777776 677777777
Q ss_pred ECCCcEEcCCC
Q 017417 356 IGRWSRVQASS 366 (372)
Q Consensus 356 i~~~~~i~~~~ 366 (372)
||+++.|..++
T Consensus 152 IG~~~vIgags 162 (203)
T 1krr_A 152 IGDNSVIGAGS 162 (203)
T ss_dssp ECTTCEECTTC
T ss_pred ECCCCEECCCC
Confidence 77777776665
No 161
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.15 E-value=2.8e-06 Score=73.85 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=21.7
Q ss_pred CCcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEc
Q 017417 312 PNVSISANARIGAGVRLI-SCIILDGVEIMENAVVTN 347 (372)
Q Consensus 312 ~~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 347 (372)
++++||++|.||.+|+|. ++.||++|+|+.+|+|..
T Consensus 118 g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~ 154 (220)
T 4hur_A 118 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 154 (220)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcc
Confidence 355677777777766654 355555555555555553
No 162
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.12 E-value=0.00012 Score=69.79 Aligned_cols=132 Identities=20% Similarity=0.177 Sum_probs=84.4
Q ss_pred CCeeEEEEeCCCCCCCccccCcccCCCCCccc-CCcchhhhhHhhcce----------EEEEcc-cchHHHHHHHhhccC
Q 017417 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL-GGQPMVHHPISACKR----------IYLVGF-YEEREFALYVSSISN 74 (372)
Q Consensus 7 ~~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv-~g~pli~~~l~~l~~----------i~vv~~-~~~~~i~~~~~~~~~ 74 (372)
+++.+|.|||| .||||+- ..||.++|+ .|+++++..++++.. ++|.++ ...+...+++++..
T Consensus 75 ~kvavvlLaGG--lGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~- 148 (484)
T 3gue_A 75 RQAVVLKLNGG--LGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYP- 148 (484)
T ss_dssp TTEEEEEEECC--CCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCH-
T ss_pred hhcEEEEEcCC--cccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCc-
Confidence 47889999999 9999976 789999999 778999999887654 455544 45567788887531
Q ss_pred CCCe---eEEEecC-----------------------CcccChHH--H-HHH--HHHHhhccCCCeEEEEcCCeeecCCh
Q 017417 75 ELRI---PVRYLRE-----------------------DKPHGSAG--A-LYN--FRDLIMEDNPSHIFLLNCDVCCSFPL 123 (372)
Q Consensus 75 ~~~~---~i~~~~~-----------------------~~~~g~~~--a-l~~--~~~~l~~~~~~~vlv~~gD~i~~~~l 123 (372)
.++. .+.+..| ..+.|.++ . ++. .++.+....-+++.+.+.|.+....-
T Consensus 149 ~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~D 228 (484)
T 3gue_A 149 TLYEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLD 228 (484)
T ss_dssp HHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCC
T ss_pred ccCCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccC
Confidence 1111 1111111 01233332 2 221 23444444457899999999554333
Q ss_pred HHHHHHHHhcCCceEEEEEec
Q 017417 124 PEMLDAHRNYGGMGTILVIKV 144 (372)
Q Consensus 124 ~~~l~~~~~~~~~~~i~~~~~ 144 (372)
..++..+...++++.+-+.+.
T Consensus 229 p~~lG~~~~~~~d~~~kvv~K 249 (484)
T 3gue_A 229 VRLLDYMHEKQLGFLMEVCRR 249 (484)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEEEEC
Confidence 456777777888887766664
No 163
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.11 E-value=1.6e-05 Score=68.48 Aligned_cols=35 Identities=26% Similarity=0.221 Sum_probs=25.2
Q ss_pred ceEECCCCEECCCcEEE-ceEECCCCEECCCcEEcC
Q 017417 330 SCIILDGVEIMENAVVT-NAIVGWKSSIGRWSRVQA 364 (372)
Q Consensus 330 ~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 364 (372)
+++||++|.||.+|.|. ++.||+++.||.++.+..
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 36777777777777777 677777777777777654
No 164
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.99 E-value=2.7e-05 Score=67.12 Aligned_cols=48 Identities=21% Similarity=0.291 Sum_probs=23.5
Q ss_pred CcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEceEECCCCEECCCcEEcCCCC
Q 017417 313 NVSISANARIGAGVRLI-SCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQASSK 367 (372)
Q Consensus 313 ~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~ 367 (372)
++.||++|.||.+|.|. ++.||++|+|+.++.|. .+ |.+++.+.+.|.
T Consensus 111 ~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~-----~d--Vp~~~vv~G~PA 159 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT-----KD--VAPYEVVGSNPA 159 (212)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC-----SC--BCTTEEEETTTT
T ss_pred CeEECCCCEECCCCEEcCCCEECCCCEECCCCEEc-----cc--cCCCcEEEecCC
Confidence 35566666666655543 34444444444444444 22 345555544443
No 165
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.69 E-value=8.8e-05 Score=63.67 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=12.4
Q ss_pred CEECCCcEEE-ceEECCCCEECCCcEEcCC
Q 017417 337 VEIMENAVVT-NAIVGWKSSIGRWSRVQAS 365 (372)
Q Consensus 337 ~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~ 365 (372)
++||++|.|. ++.|.++++||+++.|.++
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igag 143 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAAN 143 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCC
Confidence 3344444444 4444444444444444433
No 166
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.60 E-value=0.00018 Score=61.77 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=18.5
Q ss_pred CcEECCCCEECCCcEEe-ceEECCCCEECCCcEEEc
Q 017417 313 NVSISANARIGAGVRLI-SCIILDGVEIMENAVVTN 347 (372)
Q Consensus 313 ~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~ 347 (372)
.+.||++|.||.+|.|. ++.|+++|+|+.++++..
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 35555555555555554 355555555555555543
No 167
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.45 E-value=0.0018 Score=63.54 Aligned_cols=131 Identities=17% Similarity=0.210 Sum_probs=84.3
Q ss_pred CeeEEEEeCCCCCCCccccCcccCCCCCcccC---CcchhhhhHhhcce-------EEEEcc-cchHHHHHHHhhccCCC
Q 017417 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG---GQPMVHHPISACKR-------IYLVGF-YEEREFALYVSSISNEL 76 (372)
Q Consensus 8 ~~~~vIlAaG~~~g~R~~~lt~~~pK~llpv~---g~pli~~~l~~l~~-------i~vv~~-~~~~~i~~~~~~~~~~~ 76 (372)
++.+|+|||| .||||+- +.||.++|++ +++++++.++++.+ ++|.++ ...+...+++++++-.
T Consensus 114 kvavvllaGG--lGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl~- 187 (630)
T 3ogz_A 114 KTVFVLVAGG--LGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQLE- 187 (630)
T ss_dssp GEEEEEECCC--EEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTCC-
T ss_pred hceEEEecCC--cccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCCC-
Confidence 7889999999 9999986 7899999997 99999999888765 455444 5566788888763211
Q ss_pred CeeEEEecCC----------------------cccChHH--H-HHH--------------------HHHHhhccCCCeEE
Q 017417 77 RIPVRYLRED----------------------KPHGSAG--A-LYN--------------------FRDLIMEDNPSHIF 111 (372)
Q Consensus 77 ~~~i~~~~~~----------------------~~~g~~~--a-l~~--------------------~~~~l~~~~~~~vl 111 (372)
...+.+..|. .+.|.++ . ++. .++.+....-+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 1122222110 0233332 2 221 34544444457899
Q ss_pred EEcCCeee-cCChHHHHHHHHhcCCceEEEEEec
Q 017417 112 LLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKV 144 (372)
Q Consensus 112 v~~gD~i~-~~~l~~~l~~~~~~~~~~~i~~~~~ 144 (372)
+.+.|.+. ...--.++..+.+.++++.+-+.+.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r 301 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPR 301 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEEC
Confidence 99999965 2223335667777788887666553
No 168
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.37 E-value=0.00054 Score=59.12 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=18.4
Q ss_pred CcEECCCCEECCCcEEe-ceEECCCCEECCCcEEE
Q 017417 313 NVSISANARIGAGVRLI-SCIILDGVEIMENAVVT 346 (372)
Q Consensus 313 ~s~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~ 346 (372)
+++||++|.||.++.|. ++.||++|+|+.++.+.
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 45566666666665554 34555555555555444
No 169
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.13 E-value=0.00036 Score=59.92 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=66.4
Q ss_pred CCeeEEEEe--CCCCCCCccccCcccCCCCCcccCCcchhhhhHhhcce-----E-EEEcccchHHHHHHHhhccCCCCe
Q 017417 7 DKVVAVIMV--GGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----I-YLVGFYEEREFALYVSSISNELRI 78 (372)
Q Consensus 7 ~~~~~vIlA--aG~~~g~R~~~lt~~~pK~llpv~g~pli~~~l~~l~~-----i-~vv~~~~~~~i~~~~~~~~~~~~~ 78 (372)
+.|.+||++ |. ..|||.+ ...+......++||++|+++.+.. + ++++.... . .. .++.
T Consensus 2 ~~~~~vip~k~g~--~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~--~----~~---~~~~ 67 (211)
T 2i5e_A 2 NAMRAVIPYKKAG--AKSRLSP---VLSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG--L----EE---MTEA 67 (211)
T ss_dssp CCCEEEEECCCTT--TTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT--C----SS---CCSS
T ss_pred CceEEEEEeCCCC--CccccCc---cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH--H----Hh---hcCC
Confidence 568899999 66 7778754 222222336679999999998755 6 66665432 1 11 1233
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeee--cCChHHHHH
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLD 128 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~--~~~l~~~l~ 128 (372)
.++.+. .|.+.++..+...+. +.++++.||+++ ...+.++++
T Consensus 68 --~~v~~~--~gl~~sl~~a~~~~~----~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 68 --RVLLDE--KDLNEALNRYLKEAE----EPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp --EEEECC--SCHHHHHHHHHHHCC----SCEEEECSCCTTCCHHHHHHHTT
T ss_pred --EEEECC--CCHHHHHHHHHHhcC----CCEEEEcCCcCCCCHHHHHHHHc
Confidence 334444 688899999887762 469999999997 345777665
No 170
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.06 E-value=1.1 Score=38.54 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=49.3
Q ss_pred EEEEcccchHHHHHHHhhccCCCCeeEEEecCC--------cccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hH
Q 017417 54 IYLVGFYEEREFALYVSSISNELRIPVRYLRED--------KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LP 124 (372)
Q Consensus 54 i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~~--------~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~ 124 (372)
|+|+-....+...+.+..... ...+.++..+ ...|.+.+...+++..+. ++++++++|..+..+ +.
T Consensus 33 iivvDd~S~d~t~~~~~~~~~--~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g---~~i~~lD~Dd~~~~~~l~ 107 (255)
T 1qg8_A 33 LFIMDDNSNEETLNVIRPFLN--DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEG---EYITYATDDNIYMPDRLL 107 (255)
T ss_dssp EEEEECSCCHHHHHHHGGGGG--STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCC---SEEEEEETTEEECTTHHH
T ss_pred EEEEECCCCchHHHHHHHHhh--cCCEEEEecccccccccccccCHHHHHHHHHHHcCC---CEEEEeCCCCccChHHHH
Confidence 555544333444455554422 2345666555 457888888888887654 699999999998655 78
Q ss_pred HHHHHHHhc
Q 017417 125 EMLDAHRNY 133 (372)
Q Consensus 125 ~~l~~~~~~ 133 (372)
.+++.+.+.
T Consensus 108 ~~~~~~~~~ 116 (255)
T 1qg8_A 108 KMVRELDTH 116 (255)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 888887765
No 171
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=88.93 E-value=1.3 Score=37.51 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=41.6
Q ss_pred EEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEE
Q 017417 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTIL 140 (372)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~~~~~i~ 140 (372)
+.++.+ ...|.+.+.-.+++.... ++++++++|..+..+ ++.+++...+.+.++++.
T Consensus 62 i~~i~~-~n~G~~~a~N~g~~~a~g---~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 62 IKVIHK-KNAGLGMACNSGLDVATG---EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp EEEEEC-CCCCHHHHHHHHHHHCCS---SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred EEEEEC-CCCChHHHHHHHHHHcCC---CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 455544 457888898888887654 699999999988555 788888877655555433
No 172
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=87.16 E-value=2.7 Score=39.97 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=43.2
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecC-ChHHHHHHHHhcCCce
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSF-PLPEMLDAHRNYGGMG 137 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~-~l~~~l~~~~~~~~~~ 137 (372)
.+.++..+...|.+.+...+++.... ++++++++|..... -+..+++...+....+
T Consensus 90 ~v~vi~~~~n~G~~~a~N~g~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 90 PVHVIRMEQRSGLIRARLKGAAVSRG---QVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp CEEEEECSSCCCHHHHHHHHHHHCCS---SEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred cEEEEECCCCCChHHHHHHHHHhccC---CeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 46677766668999999888887654 68999999998854 4899998887665443
No 173
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=81.16 E-value=3.2 Score=35.85 Aligned_cols=83 Identities=7% Similarity=0.029 Sum_probs=52.9
Q ss_pred chhhhhHhhcce-----EEEEcccchHHH---HHHHhhccCCCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEE
Q 017417 42 PMVHHPISACKR-----IYLVGFYEEREF---ALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLL 113 (372)
Q Consensus 42 pli~~~l~~l~~-----i~vv~~~~~~~i---~~~~~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~ 113 (372)
+|+.++++.+.. ++++.......+ ..+.. . .+.++.+ ...|.+.++.++...+-....+.++++
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~~---~----~~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vlii 109 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWLG---P----QHMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLM 109 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHHC---T----TSEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhcc---C----CcEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 899999998866 555544333222 33321 1 1234444 346889999998887632223579999
Q ss_pred cCCeee--cCChHHHHHHHHh
Q 017417 114 NCDVCC--SFPLPEMLDAHRN 132 (372)
Q Consensus 114 ~gD~i~--~~~l~~~l~~~~~ 132 (372)
.+|++. ..++.++++....
T Consensus 110 gaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 110 GSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp CSSCTTCCHHHHHHHHHHTTT
T ss_pred cCCCCCCCHHHHHHHHHHhcc
Confidence 999997 4568888776543
No 174
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=78.81 E-value=7.4 Score=38.10 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=41.7
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecC-ChHHHHHHHHhcCC
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSF-PLPEMLDAHRNYGG 135 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~-~l~~~l~~~~~~~~ 135 (372)
.+.++..+...|.+.+...++..... ++++++++|..... -|..+++...+...
T Consensus 172 ~v~vi~~~~n~G~~~A~N~G~~~A~g---d~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 172 SVRILRTKKREGLIRTRMLGASVATG---DVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp TEEEEECSSCCCHHHHHHHHHHHCCS---SEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHhcCC---CEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 46667666668999999988887654 68999999998854 48888888776543
No 175
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=73.34 E-value=16 Score=36.01 Aligned_cols=98 Identities=8% Similarity=0.085 Sum_probs=56.5
Q ss_pred cccCCc-chhhhhHhhcce--------EEEEcccchHHHHHHHhhccCCCCeeEEEecCCc-ccChHHHHHHHHHHhhcc
Q 017417 36 FPLGGQ-PMVHHPISACKR--------IYLVGFYEEREFALYVSSISNELRIPVRYLREDK-PHGSAGALYNFRDLIMED 105 (372)
Q Consensus 36 lpv~g~-pli~~~l~~l~~--------i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~-~~g~~~al~~~~~~l~~~ 105 (372)
+|.-|. ..|..+|+.+.. |+|+-....+...+.+.......+ +.++.... ..|.+.++-.++.....
T Consensus 99 Ip~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~--i~~i~~~~~~~g~~~a~N~g~~~a~g- 175 (625)
T 2z86_A 99 IPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLN--IKYVRQKDYGYQLCAVRNLGLRAAKY- 175 (625)
T ss_dssp EEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSC--EEEEEECCCSCCHHHHHHHHHHHCCS-
T ss_pred EecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCC--eEEEEeCCCCcchhHHHHHHHHhCCc-
Confidence 444554 456666665532 555533322333444444333222 44443322 24577888888877644
Q ss_pred CCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceE
Q 017417 106 NPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGT 138 (372)
Q Consensus 106 ~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~~~~~ 138 (372)
++++++++|.....+ +..+++.+.+.+..+.
T Consensus 176 --~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~ 207 (625)
T 2z86_A 176 --NYVAILDCDMAPNPLWVQSYMELLAVDDNVAL 207 (625)
T ss_dssp --SEEEEECTTEEECTTHHHHHHHHHHHCTTEEE
T ss_pred --CEEEEECCCCCCCHHHHHHHHHHHhcCCceEE
Confidence 689999999998655 7888887776554333
No 176
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=70.15 E-value=7.1 Score=35.06 Aligned_cols=53 Identities=11% Similarity=0.001 Sum_probs=36.9
Q ss_pred CcccChHHHHHHHHHHhhccCCCeEEEEcCCee-ecC-ChHHHHHHHHhc-CCceEEEE
Q 017417 86 DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVC-CSF-PLPEMLDAHRNY-GGMGTILV 141 (372)
Q Consensus 86 ~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i-~~~-~l~~~l~~~~~~-~~~~~i~~ 141 (372)
....|-+.++..++...+. ++++++++|.. +.. .+..+++...+. +.+++...
T Consensus 114 ~~n~G~~~a~n~g~~~a~g---d~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 114 PIRPGKGEALWRSLAASRG---DIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp CCCCSHHHHHHHHHHHCCC---SEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred CCCCCHHHHHHHHHHhCCC---CEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 4457888888888877644 68999999998 654 488888875443 34444433
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=66.01 E-value=21 Score=34.99 Aligned_cols=89 Identities=13% Similarity=0.027 Sum_probs=51.9
Q ss_pred chhhhhHhhcce-------EEEEcccchHHHHHHHhhccCCCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEc
Q 017417 42 PMVHHPISACKR-------IYLVGFYEEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLN 114 (372)
Q Consensus 42 pli~~~l~~l~~-------i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~ 114 (372)
..|..+|+.+.. |+|+-....+...+.+....... ..+.++. ....|.+.+...++..... +++++++
T Consensus 388 ~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~-~~i~~~~-~~n~G~~~a~n~g~~~a~g---~~i~~ld 462 (625)
T 2z86_A 388 KYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANH-PRVRFIS-QKNKGIGSASNTAVRLCRG---FYIGQLD 462 (625)
T ss_dssp TTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTC-TTEEEEE-ECCCCHHHHHHHHHHHCCS---SEEEECC
T ss_pred HHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhC-CcEEEEe-CCCCCHHHHHHHHHHhcCC---CEEEEEC
Confidence 666677666543 55553322211222232221111 1244444 3447888888888887654 6899999
Q ss_pred CCeeecCC-hHHHHHHHHhcCC
Q 017417 115 CDVCCSFP-LPEMLDAHRNYGG 135 (372)
Q Consensus 115 gD~i~~~~-l~~~l~~~~~~~~ 135 (372)
+|..+..+ +..+++.+.+...
T Consensus 463 ~D~~~~~~~l~~~~~~~~~~~~ 484 (625)
T 2z86_A 463 SDDFLEPDAVELCLDEFRKDLS 484 (625)
T ss_dssp TTCEECTTHHHHHHHHHHHCTT
T ss_pred CCcccChhHHHHHHHHHHhCCC
Confidence 99988555 7888877765443
No 178
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=65.50 E-value=29 Score=32.97 Aligned_cols=55 Identities=20% Similarity=0.214 Sum_probs=41.8
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeec-CChHHHHHHHHhcCCc
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS-FPLPEMLDAHRNYGGM 136 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~-~~l~~~l~~~~~~~~~ 136 (372)
.+.++..+...|.+.+...++..... ++++++++|.... .-+..+++...+....
T Consensus 122 ~v~vi~~~~n~G~~~A~N~G~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 122 KVRVLRNDRREGLMRSRVRGADAAQA---KVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp TEEEEECSSCCHHHHHHHHHHHHCCS---SEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CEEEEECCCCcCHHHHHHHHHHhcCC---CEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 35666655667888888888887654 6899999999884 4589999888776553
No 179
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=64.54 E-value=26 Score=34.96 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=43.4
Q ss_pred eEEEecCCcccChHHHHHHHHHHhhcc-CCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEE
Q 017417 79 PVRYLREDKPHGSAGALYNFRDLIMED-NPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTIL 140 (372)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~l~~~-~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~~~~~i~ 140 (372)
.+.++.+. ..|.+.+.-.++...... +.+++++++.|.....+ +..+++.+...+....+.
T Consensus 241 ~I~vI~~~-N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg 303 (657)
T 4fix_A 241 RLSIHDQP-NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVG 303 (657)
T ss_dssp GEEEEECC-CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEE
T ss_pred CEEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEE
Confidence 46666665 678888888887776432 34789999999998554 888888877765443333
No 180
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=56.80 E-value=55 Score=27.65 Aligned_cols=71 Identities=4% Similarity=-0.108 Sum_probs=42.2
Q ss_pred ccchHHHHHHHh----hccCCCCeeEEEecCCcc--cChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHH
Q 017417 59 FYEEREFALYVS----SISNELRIPVRYLREDKP--HGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHR 131 (372)
Q Consensus 59 ~~~~~~i~~~~~----~~~~~~~~~i~~~~~~~~--~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~ 131 (372)
....+.+..-+. +...+-..++..+++... .|.+.+.-.+.+... .+++++++.|+.++.+ ++.+++...
T Consensus 24 yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~~g~a~a~N~Gi~~A~---g~yl~fln~D~~~~~~~l~~l~~~~~ 100 (249)
T 2nxv_A 24 VRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQFHGFSWHKQMLPRCK---GRYVIFCHEDVELVDRGYDDLVAAIE 100 (249)
T ss_dssp ESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCSCCTTTHHHHHGGGCC---SSEEEEEETTEECSSCCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCcccHHHHHHHHHHhcC---CCEEEEECCCcccCccHHHHHHHHHH
Confidence 444455555555 222221256666654322 455566655555543 3799999999998655 778877665
Q ss_pred h
Q 017417 132 N 132 (372)
Q Consensus 132 ~ 132 (372)
+
T Consensus 101 ~ 101 (249)
T 2nxv_A 101 A 101 (249)
T ss_dssp H
T ss_pred h
Confidence 4
No 181
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=50.66 E-value=3.3 Score=41.96 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=0.0
Q ss_pred eeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeecC-ChHHHHHHHH
Q 017417 78 IPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSF-PLPEMLDAHR 131 (372)
Q Consensus 78 ~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~-~l~~~l~~~~ 131 (372)
..+.++..+...|.+.+.-.+++.... ++++++++|..+.. -++.+++...
T Consensus 58 ~~i~~i~~~~n~G~~~arN~gi~~A~g---dyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 58 KNIRFIDLDENSGHAHARNIALEEVET---PYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp -------------------------------------------------------
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhccC---CEEEEECCCCCCChhHHHHHHHHhc
Confidence 346666655567888888888777654 68999999998844 4777777765
No 182
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=48.03 E-value=50 Score=33.67 Aligned_cols=43 Identities=14% Similarity=0.131 Sum_probs=33.0
Q ss_pred cChHHHHHHHHHHhhccCCCeEEEEcCCeeecCC-hHHHHHHHHhcC
Q 017417 89 HGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYG 134 (372)
Q Consensus 89 ~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~~~-l~~~l~~~~~~~ 134 (372)
.|-++++..+++..+. ++++++++|+....+ +.+++..+.+.+
T Consensus 224 ~GKa~alN~gl~~a~g---d~Il~lDaD~~~~pd~L~~lv~~~~~dp 267 (802)
T 4hg6_A 224 HAKAGNMSAALERLKG---ELVVVFDADHVPSRDFLARTVGYFVEDP 267 (802)
T ss_dssp SHHHHHHHHHHHHCCC---SEEEECCTTEEECTTHHHHHHHHHHHSS
T ss_pred CcchHHHHHHHHhcCC---CEEEEECCCCCcChHHHHHHHHHHhcCC
Confidence 5677788888887654 689999999998655 888888775543
No 183
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=46.64 E-value=33 Score=28.39 Aligned_cols=83 Identities=7% Similarity=-0.021 Sum_probs=49.8
Q ss_pred HHhhccCCCeEEEEcCC---eee-cCChHHHHHHHHhcCCceEEEEEecCCcccccceEEEEcCCCCceeEeeecCCCcc
Q 017417 100 DLIMEDNPSHIFLLNCD---VCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTNELLHYTEKPETFV 175 (372)
Q Consensus 100 ~~l~~~~~~~vlv~~gD---~i~-~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~~~v~~i~ek~~~~~ 175 (372)
.++.+.+.++++.+++| .-+ +.++.+++ +.++|+++..++.+... .+.. .. + .+..+-....
T Consensus 47 ~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~K~~~--~~s~--~a--~----~y~~~i~~~~ 112 (203)
T 2c0n_A 47 MFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYLKTLR--GYSV--YR--K----DWEKEIFDGE 112 (203)
T ss_dssp HHHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBCTTSS--SBSE--ES--S----SBCSSCCCEE
T ss_pred HHHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeeccCCC--ccch--HH--H----HHHHhccCce
Confidence 45665556899999999 434 33455555 45788999988875322 1111 11 1 1111111113
Q ss_pred cCceeeeEEEeCHhhHHHhhh
Q 017417 176 SDLINCGVYVFTPDIFNAIQG 196 (372)
Q Consensus 176 ~~~~~~Giy~~~~~~~~~l~~ 196 (372)
-...-+|...+++++|+.+.+
T Consensus 113 V~d~~tGF~lIkR~V~e~L~~ 133 (203)
T 2c0n_A 113 VNGCGLGFTFIKREFLEKIKR 133 (203)
T ss_dssp CSEECSSEEEEEHHHHTTSCS
T ss_pred eeeccccEEEEhHHHHHHHhh
Confidence 456778999999999988755
No 184
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=41.17 E-value=13 Score=34.30 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=54.9
Q ss_pred ccChHHHHHHHHHHhhccCCCeEEEEcCCee-e-cCChHHHHHHHHhc-CCceEEEEEecCCcccccceEEEEcCCCCce
Q 017417 88 PHGSAGALYNFRDLIMEDNPSHIFLLNCDVC-C-SFPLPEMLDAHRNY-GGMGTILVIKVSAESASQFGELVADPDTNEL 164 (372)
Q Consensus 88 ~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i-~-~~~l~~~l~~~~~~-~~~~~i~~~~~~~~~~~~~~~v~~~~~~~~v 164 (372)
..|-+.++..+...... ++++++++|.. . +..+..+++...+. +.+++............. .... ..+++
T Consensus 164 n~G~g~A~n~G~~~A~g---d~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~---~~~~-~~g~v 236 (387)
T 3f1y_A 164 AHGKGDAMWRALSVTRG---DLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGES---IEED-GGGRV 236 (387)
T ss_dssp CCSHHHHHHHHTTTCCS---SEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC----------CCB-CCSHH
T ss_pred cCCHHHHHHHHHHhcCC---CEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccc---cccc-cCCch
Confidence 45777777777765543 68999999998 5 44588888877665 456666554321110000 0001 12333
Q ss_pred eEeeec-------CCCcccCceeeeEEEeCHhhHHHh
Q 017417 165 LHYTEK-------PETFVSDLINCGVYVFTPDIFNAI 194 (372)
Q Consensus 165 ~~i~ek-------~~~~~~~~~~~Giy~~~~~~~~~l 194 (372)
...... +.........+|.+.+++++|+.+
T Consensus 237 ~~~~~~~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i 273 (387)
T 3f1y_A 237 TELTAKPLFNLFYPELAGFVQPLAGEFVADRELFCSI 273 (387)
T ss_dssp HHHTHHHHHHHHCGGGTTCSCTTCSCEEEEHHHHTTS
T ss_pred hhhhHHHHHHHHhHhhccccccccccEEEEHHHHHhC
Confidence 322111 000011223478899999999887
No 185
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=29.05 E-value=1.4e+02 Score=24.94 Aligned_cols=22 Identities=14% Similarity=0.444 Sum_probs=15.7
Q ss_pred CCCCCCeeEEEEeCCCCCCCcccc
Q 017417 3 SSEDDKVVAVIMVGGPTKGTRFRP 26 (372)
Q Consensus 3 ~~~~~~~~~vIlAaG~~~g~R~~~ 26 (372)
.||.++++..||+.| .|+-+..
T Consensus 3 ~~~~~~~ri~vl~SG--~gsnl~a 24 (215)
T 3kcq_A 3 GSMKKELRVGVLISG--RGSNLEA 24 (215)
T ss_dssp ----CCEEEEEEESS--CCHHHHH
T ss_pred CCCCCCCEEEEEEEC--CcHHHHH
Confidence 578788899999999 8888865
No 186
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=23.38 E-value=2.7e+02 Score=21.78 Aligned_cols=90 Identities=16% Similarity=0.079 Sum_probs=47.4
Q ss_pred hhhhHhhcce---EEEEcccchHHHHHHHhhccCCCCeeEEEecCCcccChHHHHHHHHHHhhccCCCeEEEEcCCeeec
Q 017417 44 VHHPISACKR---IYLVGFYEEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS 120 (372)
Q Consensus 44 i~~~l~~l~~---i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~l~~~~~~~vlv~~gD~i~~ 120 (372)
++.+++.+.+ |++++......+..++...-..++.++.....+ .+.+......++. +++++.-.-.-..
T Consensus 29 l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~-----~~~~~~~~~~~~~---~d~~i~iS~sG~t 100 (187)
T 3sho_A 29 IEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEG-----GSTLTITLANLRP---TDLMIGVSVWRYL 100 (187)
T ss_dssp HHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCC-----THHHHHHHHTCCT---TEEEEEECCSSCC
T ss_pred HHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCC-----chhHHHHHhcCCC---CCEEEEEeCCCCC
Confidence 4444444433 888887766656555554333455666555311 1222222333433 4566655444334
Q ss_pred CChHHHHHHHHhcCCceEEEE
Q 017417 121 FPLPEMLDAHRNYGGMGTILV 141 (372)
Q Consensus 121 ~~l~~~l~~~~~~~~~~~i~~ 141 (372)
.++.++++..++.++....++
T Consensus 101 ~~~~~~~~~ak~~g~~vi~IT 121 (187)
T 3sho_A 101 RDTVAALAGAAERGVPTMALT 121 (187)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEe
Confidence 457777777777776554444
No 187
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=22.93 E-value=3.1e+02 Score=24.60 Aligned_cols=36 Identities=11% Similarity=-0.077 Sum_probs=23.4
Q ss_pred HHHHHHHHHh-hccCCCeEEEEcCCeeecCChHHHHH
Q 017417 93 GALYNFRDLI-MEDNPSHIFLLNCDVCCSFPLPEMLD 128 (372)
Q Consensus 93 ~al~~~~~~l-~~~~~~~vlv~~gD~i~~~~l~~~l~ 128 (372)
..+..++..+ .....+.++++-.|.+...++-+.+.
T Consensus 85 ~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 85 RHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 5555666653 31224789999999999887544333
No 188
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=21.49 E-value=2.2e+02 Score=26.12 Aligned_cols=53 Identities=11% Similarity=0.025 Sum_probs=38.0
Q ss_pred ccChHHHHHHHHHHhh-ccCCCeEEEEcCCee-e-cCChHHHHHHHHhcCCceEEEE
Q 017417 88 PHGSAGALYNFRDLIM-EDNPSHIFLLNCDVC-C-SFPLPEMLDAHRNYGGMGTILV 141 (372)
Q Consensus 88 ~~g~~~al~~~~~~l~-~~~~~~vlv~~gD~i-~-~~~l~~~l~~~~~~~~~~~i~~ 141 (372)
..|-+.|+..+..+.. ....+.++++++|.- . +..+.++++...+ ++|+++..
T Consensus 73 n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~ 128 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHY 128 (397)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEE
Confidence 4799999999995432 233468999999984 4 5568888887644 57777654
Done!