BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017418
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q23571|ODB2_CAEEL Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial
OS=Caenorhabditis elegans GN=ZK669.4 PE=3 SV=1
Length = 448
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 10/285 (3%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGIAE ++ +W+VKEGD I +F +C VQSDKA + I+ RY G V +L H
Sbjct: 30 VVQFKLSDIGEGIAEVQVKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYH 89
Query: 149 APGNIVKVGETLLKLVV-GDSAVP-TPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATP 206
+ +VG+ L+ + + G+ P P + S ++P + + + G VLATP
Sbjct: 90 EVDGMARVGQALIDVEIEGNVEEPEQPKKEAASSSPEAPKSSAPKAPESAHSEGKVLATP 149
Query: 207 TVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEE 266
VR +A I L +V TGKDGRVLKEDVLK+ Q A + ++ + +
Sbjct: 150 AVRRIAIENKIKLAEVRGTGKDGRVLKEDVLKFLGQVPADHTSGSTNIRTTHQAPQPSSK 209
Query: 267 ETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 326
P +D VP+RG+ R MVKTM+ A KIPHF Y +EIN D+LVK +A +
Sbjct: 210 SYEP--------LKEDVAVPIRGYTRAMVKTMTEALKIPHFGYNDEINVDSLVKYRAELK 261
Query: 327 NNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKG 371
+ +IK +++P IK+ S+A+ +YP +NS +E+ VI K
Sbjct: 262 EFAKERHIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIHKA 306
>sp|P11182|ODB2_HUMAN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Homo
sapiens GN=DBT PE=1 SV=3
Length = 482
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 155/284 (54%), Gaps = 8/284 (2%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGRKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEET 268
R LA I L +V +GKDGR+LKED+L Y ++ A P + V ++ T
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKVEI-MPPPPKPKDMT 236
Query: 269 YPQTFAEVKWYP-DDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQN 327
P ++ + DKT P++GFQ+ MVKTMS A KIPHF Y +EI+ LVKL+ +
Sbjct: 237 VPILVSKPPVFTGKDKTEPIKGFQKAMVKTMSAALKIPHFGYCDEIDLTELVKLREELKP 296
Query: 328 NNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKG 371
IK +F+P +K+ S+ + ++P +N+ +E + K
Sbjct: 297 IAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKA 340
>sp|P53395|ODB2_MOUSE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Mus
musculus GN=Dbt PE=2 SV=2
Length = 482
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKRLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLID--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPSTASVSADCREQLLGEEE 267
R LA I L +V +GKDGR+LKED+L + Q GA PS S Q ++
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILSFLEKQTGAILPPSPKSEITPPPPQ--PKDR 235
Query: 268 TYPQTFAEVKWYP-DDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 326
T+P A+ + D+T P+ GFQ+ MVKTMS A KIPHF Y +EI+ LVKL+ +
Sbjct: 236 TFPTPIAKPPVFTGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEIDLTQLVKLREELK 295
Query: 327 NNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKG 371
IK +F+P +K+ S+ + ++P +N+ +E + K
Sbjct: 296 PVALARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKA 340
>sp|P11181|ODB2_BOVIN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Bos taurus
GN=DBT PE=1 SV=2
Length = 482
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
IV L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 IVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+ VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDTAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSA-----DCREQLL 263
R LA I L +V +GKDGR+LKED+L Y ++ A P + +++ +
Sbjct: 178 RRLAMENNIKLSEVIGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIMPPPPKPKDRTI 237
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKA 323
+ P F D+T P++GF + MVKTMS A KIPHF Y +E++ LVKL+
Sbjct: 238 PIPISKPPVFIG-----KDRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLRE 292
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKG 371
+ IK +F+P +K+ S+ + ++P +N+ +E + K
Sbjct: 293 ELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKA 340
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P + +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P + +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 16/288 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD-CREQLL 263
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA P+ ++ SAD + +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGA---PTASNESADSATNEEV 182
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLK 322
E P + +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 183 AETPAAPAAVSLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHR 241
Query: 323 ASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 242 KKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 14/287 (4%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPT--PSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 264
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATNEE--VA 183
Query: 265 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 323
E P + +P + T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFP-ETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 324 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHK 289
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 154 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 201
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 202 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQ 261
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y + +G +T+ S
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSVASESTSSD 186
Query: 262 LLGEEETYPQTFAEVKWYPDDKTVPL--RGFQRTMVKTMSMAAKIPHFHYVEEINCDALV 319
++ T Q E + + +P + + MV + A PH ++EI+ L
Sbjct: 187 VVNASAT--QALPEGDFPETTEKIPAMRKAIAKAMVNSKHTA---PHVTLMDEIDVQELW 241
Query: 320 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
+ F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ EV+ K
Sbjct: 242 DHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHK 292
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 19/291 (6%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 154 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 201
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 202 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQ 261
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y + +G +T++ S
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSAASESTSSD 186
Query: 262 LLGEEETYPQTFAEVKWYPDDKTVPL--RGFQRTMVKTMSMAAKIPHFHYVEEINCDALV 319
++ T Q E + + +P + + MV + A PH ++EI+ L
Sbjct: 187 VVNASAT--QALPEGDFPETTEKIPAMRKAIAKAMVNSKHTA---PHVTLMDEIDVQELW 241
Query: 320 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
+ F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ EV+ K
Sbjct: 242 DHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHK 292
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 62/310 (20%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GDE+ E LC VQ+DKA +EI S KGKV ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSEN--------------------SPDSK 193
VG+TL+ L PG EN S + K
Sbjct: 67 ATVGQTLITL------------------DAPGYENMTFKGQEQEEAKKEEKTETVSKEEK 108
Query: 194 LNKDTVGG------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAV 241
++ V+A P+VR A+ G+++ V TGK+GRVLKED+ +
Sbjct: 109 VDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 168
Query: 242 QKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA 301
+ +A + E +P+T + + G +R + K M +
Sbjct: 169 GGAKPAPAAAEEKAAPAAAKPATTEGEFPETREK-----------MSGIRRAIAKAMVHS 217
Query: 302 AKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCF 360
PH ++E + LV + F+ ++ IK TFLP ++K+L A+ +YP +N+
Sbjct: 218 KHTAPHVTLMDEADVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSI 277
Query: 361 NEESLEVILK 370
++E+ E+I K
Sbjct: 278 DDETEEIIQK 287
>sp|P09062|ODB2_PSEPU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB
PE=3 SV=1
Length = 423
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 43/294 (14%)
Query: 92 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 151
+ + GEGIA+ EL++WFVK GD I E Q + V +DKAT+EI S GKV L PG
Sbjct: 6 IKMPDIGEGIAQVELVEWFVKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQPG 65
Query: 152 NIVKVGETLLKLVVGDSA--------------------VPTPSSDVLESVKPPGSENSPD 191
++ VG L+++ V S P P DV + + +
Sbjct: 66 EVMAVGSELIRIEVEGSGNHVDVPQAKPAEVPAAPVAAKPEPQKDVKPAAYQASASHEAA 125
Query: 192 SKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPST 251
+ + LA+P VR A GI L V +G GR+L ED+ + + +A G +
Sbjct: 126 PIVPRQPGDKPLASPAVRKRALDAGIELRYVHGSGPAGRILHEDLDAFMSKPQSAAGQT- 184
Query: 252 ASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAA-KIPHFHYV 310
P +A D + VP+ G +R + + M A ++ HF YV
Sbjct: 185 ------------------PNGYAR---RTDSEQVPVIGLRRKIAQRMQDAKRRVAHFSYV 223
Query: 311 EEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEES 364
EEI+ AL L+ + + D K T LP L+++L +A+ +P +N+ +++E+
Sbjct: 224 EEIDVTALEALRQQLNSKHGDSRGKLTLLPFLVRALVVALRDFPQINATYDDEA 277
>sp|Q9I1M0|ODB2_PSEAE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=bkdB PE=1 SV=1
Length = 428
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 92 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 151
+ + GEGIAE EL++W V+ GD + E Q L V +DKAT+EI S G++ L PG
Sbjct: 6 IKMPDIGEGIAEVELVEWHVQVGDSVNEDQVLAEVMTDKATVEIPSPVAGRILALGGQPG 65
Query: 152 NIVKVGETLLKLVVGDSAVPTPS-------------------------------SDVLES 180
++ VG L++L V + S L
Sbjct: 66 QVMAVGGELIRLEVEGAGNLAESPAAATPAAPVAATPEKPKEAPVAAPKAAAEAPRALRD 125
Query: 181 VKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240
+ P P + LA+P VR A+ GI L V +G GRVL ED+ Y
Sbjct: 126 SEAPRQRRQPGER--------PLASPAVRQRARDLGIELQFVQGSGPAGRVLHEDLDAYL 177
Query: 241 VQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSM 300
Q G+ A+ Q +AE D++ VP+ G +R + + M
Sbjct: 178 TQDGSVARSGGAA-----------------QGYAE---RHDEQAVPVIGLRRKIAQKMQD 217
Query: 301 AA-KIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSC 359
A +IPHF YVEEI+ L L+A K T LP L++++ +A+ +P +N+
Sbjct: 218 AKRRIPHFSYVEEIDVTDLEALRAHLNQKWGGQRGKLTLLPFLVRAMVVALRDFPQLNAR 277
Query: 360 FNEESLEVILK 370
+++E+ EV+ +
Sbjct: 278 YDDEA-EVVTR 287
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 40/306 (13%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK DE++E L VQ+DKA +EI S KGKV +L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEGTV 66
Query: 154 VKVGETL----------LKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLN---KDTVG 200
VG+T+ L+ D + + ++S G + + + + K T
Sbjct: 67 ATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEPAKATGA 126
Query: 201 G------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY---AVQKGA 245
G V+A P+VR A+ G+++ V +G +GRV+KED+ + Q+ A
Sbjct: 127 GQQDQAEVDPNKRVIAMPSVRKYAREKGVDIRKVTGSGNNGRVVKEDIDSFVNGGAQEAA 186
Query: 246 ADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI- 304
+ +A E +P+T + + G ++ + K M +
Sbjct: 187 PQETAAPQETAAKPAAAPAPEGEFPETREK-----------MSGIRKAIAKAMVNSKHTA 235
Query: 305 PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEES 364
PH ++E++ LV + F+ +D IK T+LP ++K+L+ A+ K+P +N+ ++++
Sbjct: 236 PHVTLMDEVDVTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKT 295
Query: 365 LEVILK 370
EVI K
Sbjct: 296 DEVIQK 301
>sp|P35489|ODP2_ACHLA Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC
PE=1 SV=1
Length = 544
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 28/301 (9%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
I D A GEGI E +L+W K GD+++E + L V++DK E+ S G + +L
Sbjct: 113 IYDFKFADIGEGIHEGTILQWNFKVGDKVKEGETLVVVETDKVNAELPSPVDGTILKLGK 172
Query: 149 APGNIVKVGETLLKLVVGDSAVP-----TPSSDVLESVKPPGSENSPDSKLNKDTVGG-- 201
A G ++ VGET+ +++G + P ++ S G+ + +++ D +GG
Sbjct: 173 AEGEVIHVGETV--VLIGQNGATLEQAQAPKAEAPVSEPKKGAGVVGEIEVSDDIIGGSE 230
Query: 202 ----------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPST 251
VLA+P R LA G+++ + +G+ GRV+K+DV + P+
Sbjct: 231 EVHVVATTGKVLASPVARKLASDLGVDIATIKGSGEQGRVMKDDVQN-------SKAPAE 283
Query: 252 ASVSADCREQLLGEEETYPQTFAEV-KWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHY 309
A + + +FA K D + V + ++ + M+ + IP
Sbjct: 284 AQAPVQQTQAPAQAAASVAPSFAAAGKPQGDVEVVKITRLRKAVSNAMTRSKSIIPETVL 343
Query: 310 VEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVIL 369
++EIN DALV + + IK T++ + K++ +A+ ++P N+ FN ++ EV +
Sbjct: 344 MDEINVDALVNFRNEAKGLAESKGIKLTYMAFIAKAVLIALKEFPMFNASFNHDTDEVYI 403
Query: 370 K 370
K
Sbjct: 404 K 404
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
A GEGI E +L+W K GD+++E + L V++DK E+ S G + L G
Sbjct: 6 FADIGEGIHEGTVLQWNFKVGDKVKEGETLVIVETDKVNAELPSPVDGTIVSLGAKEGEE 65
Query: 154 VKVGETLLKL 163
+ VG+ ++ +
Sbjct: 66 IHVGQIIVTI 75
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
I + + Q GE + E + KW V GD++ ++ P+ V +DK E+ S + G + +L+
Sbjct: 3 IEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVG 62
Query: 149 APGNIVKVGETLLKLVVGDSAVPT-------PSSDVLES--VKPPGSENSPDSKLNKDTV 199
G ++VGE + K+ + A P +S+ E+ K G+ + P+ K
Sbjct: 63 EEGQTLQVGEMICKIET-EGANPAEQKQEQPAASEAAENPVAKSAGAADQPNKK------ 115
Query: 200 GGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY----AVQ-------KGAADG 248
+P V LA +GI+L V TG GR+ ++D+ + VQ K AA
Sbjct: 116 ---RYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQNPEELKTAAPA 172
Query: 249 PSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHF 307
P +AS EE +YP + A DK +P+ G ++ + M + +IPH
Sbjct: 173 PKSASKPEPK------EETSYPASAA------GDKEIPVTGVRKAIASNMKRSKTEIPHA 220
Query: 308 HYVEEINCDALVKLKASFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCF 360
+ E++ +V + S +++ TF +K+++ A+ ++P MNS +
Sbjct: 221 WTMMEVDVTNMVAYRNSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMW 274
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 57/313 (18%)
Query: 82 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 140
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 141 GKVAQLLHAPGNI-VKVGETLLKLVVGDS---------------------AVPTPSSDVL 178
G +A+++ A G+ ++VGE ++ + V D A PTP+
Sbjct: 163 GYLAKIVKAEGSKEIQVGE-VIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKE 221
Query: 179 ESVKPPGSENSPD-SKLNKDTVGG-VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 236
E VK P S P SK + G V A+P R LA+ + L D++ TG +GR++K D+
Sbjct: 222 EKVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADI 281
Query: 237 LKYAVQ--KGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTM 294
+Y KGA PS S D + L D +P ++
Sbjct: 282 DEYLASSGKGATAKPSK---STDSKAPAL-----------------DYVDIPHSQIRKVT 321
Query: 295 VKTMSMAAK-IPHFHYVEEINCDALVKLKA---SFQNNNSDPNIKHTFLPSLIKSLSMAM 350
++ + + IPH++ + D L+ L++ SF+ + I L ++K+ ++A+
Sbjct: 322 ASRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDL--VVKAAALAL 379
Query: 351 SKYPFMNSCFNEE 363
K P NS + ++
Sbjct: 380 RKVPQCNSSWTDD 392
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 49/299 (16%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLL-------HAPGNI 153
+ E L KW VKEGD ++ L +++DKA +E + G +A++L A G +
Sbjct: 14 MTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEGSENIAVGQV 73
Query: 154 VKV----GETLLKLVVGDSAV---PTPSSDVLESVKPPGSENSPDSKLNK---------- 196
+ V GE + ++ S+ P+ +DV + S D+ L+K
Sbjct: 74 IAVMAEAGEDVSQVAASASSQISEPSEKADVAQKETADSETISIDASLDKAISNAGYGNK 133
Query: 197 ---------DTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAAD 247
+ G + A+P + LAK ++L V+ +G GR++K D+ + + A
Sbjct: 134 TENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVNGSGPHGRIIKADIEAFIAE--ANQ 191
Query: 248 GPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPH 306
S SVS P+ ++ ++ L +R + + ++ + + IPH
Sbjct: 192 ASSNPSVS-------------TPEASGKITHDTPHNSIKLSNMRRVIARRLTESKQNIPH 238
Query: 307 FHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+ ++ DAL+KL++ + + NIK + LIK+ ++A+ P +N F+ + +
Sbjct: 239 IYLTVDVQMDALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFDGDQM 297
>sp|P57302|ODP2_BUCAI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=aceF PE=3 SV=1
Length = 396
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 26/275 (9%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G+ E E+++ V ++I Q L V+ DK ++EI S G V + G +K
Sbjct: 5 GLEEVEIIEILVSINEKIAPEQGLITVEGDKTSMEIPSPISGIVKHIFIKIGEKIKTDAL 64
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINL 219
+++ V + + E N + KD ATP +R LA+ INL
Sbjct: 65 IMRCEVENIDFHVKKKE--EICLDNNVLNKVEKNFKKDIFFH--ATPLIRRLARNLNINL 120
Query: 220 YDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWY 279
YDV TG R+LKED+ Y ++ +E L+ EE F + K
Sbjct: 121 YDVVGTGPKNRILKEDLDLY---------------QSNIKENLI--EEKNKINFGDSK-K 162
Query: 280 PDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQN---NNSDPNIK 335
K + L Q+ + + IPH +E++ L K + + N N N
Sbjct: 163 SKTKELELSDIQKNIGNNLHRNWMNIPHVTQFDEVDITILEKFRQKYNNEKRNQKKTNEN 222
Query: 336 HTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
T L +IK ++ A+ K+P NS N + ++ILK
Sbjct: 223 ITILVFIIKVVAYALEKFPIFNSSLNINNKKIILK 257
>sp|Q8K9T8|ODP2_BUCAP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=aceF PE=3 SV=2
Length = 402
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 24/277 (8%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G+ E E+ + VK G+EI+ Q L V+ DKA++EI S G V + G VK
Sbjct: 5 GLEEVEVTEILVKIGEEIKLDQGLITVEGDKASMEIPSPISGIVKDITIKIGEKVKTSSI 64
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPG--SENSPDSKLNKDTVGGVLATPTVRNLAKLYGI 217
++ V + D L +K +EN + K + + V ATP VR LA+ +
Sbjct: 65 IMIFKVNNLNSIKNEKD-LNYIKTEKKLNENFLEEKKDIKKIVLVHATPVVRRLARHLNV 123
Query: 218 NLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVK 277
+L ++ +G R+LKED+ Y + S+ ++ + + F E
Sbjct: 124 DLKNITPSGPKNRILKEDIELYI--RNNTSNKSSFNIEKNNTTNF------HKDLFNE-- 173
Query: 278 WYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNNNSDPN--- 333
+P+ Q+ + K + IPH +E+N L + + + N
Sbjct: 174 -------IPITNIQQIIGKNLHQNWVNIPHVTQFDEVNITLLEEFRHKYNTEKKQKNNMC 226
Query: 334 IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
K T LP +IKS++ + ++P NS + + LK
Sbjct: 227 SKITILPFIIKSVAYGLLEFPIFNSSLSVNKKTIFLK 263
>sp|O06159|BKDC_MYCTU Dihydrolipoyllysine-residue acyltransferase component of
branched-chain alpha-ketoacid dehydrogenase complex
OS=Mycobacterium tuberculosis GN=bkdC PE=1 SV=2
Length = 393
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 44/271 (16%)
Query: 93 PLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN 152
P+ GEG+ E + W V GD++E Q LC+V++ KA +EI S Y G++ +L A G+
Sbjct: 11 PVPDLGEGLQEVTVTCWSVAVGDDVEINQTLCSVETAKAEVEIPSPYAGRIVELGGAEGD 70
Query: 153 IVKVGETLLKLVVGDSAVPTPSSD-VLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNL 211
++KVG L+++ G +AV P+ + + ++ G++ + ++ LA P VR L
Sbjct: 71 VLKVGAELVRIDTGPTAVAQPNGEGAVPTLVGYGADTAIETSRRTSR---PLAAPVVRKL 127
Query: 212 AKLYGINLYDVD-ATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYP 270
AK ++L + +G G + + DVL A
Sbjct: 128 AKELAVDLAALQRGSGAGGVITRADVLAAARGG--------------------------- 160
Query: 271 QTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNN 329
V PD + P+ G M + M+++ K IP E+ C L++L+ F +
Sbjct: 161 -----VGAGPDVR--PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFV--S 211
Query: 330 SDPNIKHTFLPSLIKSLSMAMSKYPFMNSCF 360
+ P I T ++ L +A+ +NS +
Sbjct: 212 AAPEI--TPFALTLRLLVIALKHNVILNSTW 240
>sp|Q89AQ9|ODP2_BUCBP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=aceF PE=3 SV=1
Length = 410
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E+++ VK GD++++ L V+ KA+IEI + + G + + IV +GE
Sbjct: 5 GTDLVEVIEILVKIGDQVKKDDSLITVEGQKASIEIPASHTGTIKNI------IVHIGE- 57
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------------VL 203
K+ G D ++VK +S K +K+T V
Sbjct: 58 --KITTGSLIAILNGID--DNVKSKNDSSSYSFKNSKNTSTNSNLGNVNNNINNRTILVH 113
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 263
ATPTVR LA+ + I L ++ TG+ GR+LKEDV+ Y S+ D ++ L
Sbjct: 114 ATPTVRRLARKFDIKLENITGTGRKGRILKEDVISY----------KNISLFNDIKKSL- 162
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK----IPHFHYVEEINCDALV 319
++T + + D K++ L RT +++ K IPH +E + L
Sbjct: 163 --KKTNVNYYKDNVTCDDFKSIEL---TRTQIRSSKNLLKSWLTIPHVTQFDESDITELE 217
Query: 320 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMN 357
+ + ++ D + K T L +IK++S A+ +P N
Sbjct: 218 NFRQKYNSDLKDKSKKLTILIFVIKAVSKALEMFPKFN 255
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 55/312 (17%)
Query: 82 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 140
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 141 GKVAQLLHAPG-NIVKVGETLLKLVVGDSAVP-----TPSSDV---------------LE 179
G +A+++ G ++VGE + V + + TPSSD E
Sbjct: 163 GFLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEE 222
Query: 180 SVKPPGSENSPDSKLNKDTVG----GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235
V+ P S +P++K++K + + A+P R LA+ + L + TG +GR++K D
Sbjct: 223 KVEKPAS--APEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKAD 280
Query: 236 VLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMV 295
V + + G+ + + S D + L Y D +P ++
Sbjct: 281 VEDF-LASGSKETTAKPSKQVDSKVPALD--------------YVD---IPHTQIRKVTA 322
Query: 296 KTMSMAAK-IPHFHYVEEINCDALVKLKA---SFQNNNSDPNIKHTFLPSLIKSLSMAMS 351
++ + + IPH++ + D ++ L++ SFQ + I L +IK+ ++A+
Sbjct: 323 SRLAFSKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDL--VIKAAALALR 380
Query: 352 KYPFMNSCFNEE 363
K P NS + +E
Sbjct: 381 KVPQCNSSWTDE 392
>sp|P45118|ODP2_HAEIN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=aceF PE=3 SV=1
Length = 567
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 139/329 (42%), Gaps = 49/329 (14%)
Query: 86 ASGIVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQ 145
AS IV+V + G E + + V GD I E Q L V+ DKA++E+ + + G V +
Sbjct: 105 ASAIVEVNVPDIGGD--EVNVTEIMVAVGDTITEEQSLITVEGDKASMEVPAPFGGVVKE 162
Query: 146 LLHAPGNIVKVGETLLKL-VVG---------------------------------DSAVP 171
+L G+ V G +++ V+G D+
Sbjct: 163 ILVKSGDKVSTGSLIMRFEVLGAAPAESASAPASTSAPQTAAPATTAQAPQAAAPDTTAQ 222
Query: 172 TPSSDVLESVKPPGSENSPDSKLNKDTV----GGVLATPTVRNLAKLYGINLYDVDATGK 227
P + ++ N+ S L+++ V G ATP +R LA+ +G+NL V TG+
Sbjct: 223 APQAAAPDTTAQAAQSNNNVSGLSQEQVEASTGYAHATPVIRRLAREFGVNLDKVKGTGR 282
Query: 228 DGRVLKEDVLKY------AVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPD 281
GR++KED+ Y A + GA + V+ LL + F E++
Sbjct: 283 KGRIVKEDIEAYVKTAVKAYESGATAQATGNGVANGAGLGLLPWPKVDFSKFGEIEEVEL 342
Query: 282 DKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPS 341
+ + G + + + + HF + + +A K + + + +K T +
Sbjct: 343 SRINKISG--ANLHRNWVIIPHVTHFDKADITDLEAFRKEQNALREKQK-LGVKITPVVF 399
Query: 342 LIKSLSMAMSKYPFMNSCFNEESLEVILK 370
++K+++ A+ YP NS E++ +ILK
Sbjct: 400 IMKAVAKALEAYPRFNSSITEDAQRLILK 428
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 140/288 (48%), Gaps = 27/288 (9%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ ++ + + E I+E + +W + GD +E+ + L +++DK +E+T+ G + ++L
Sbjct: 1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLK 60
Query: 149 APGNIVKVGETL--LKLVVGDSAVPTPS--SDVLESVK------PPGSENSPDSKLNKDT 198
G+ V+VGE + + G+S+ P P+ ++ ESVK P E S +++ +
Sbjct: 61 DSGDTVQVGEIIGTISEGAGESSAPAPTEKTESKESVKEEKQAEPAAQEVSEEAQ--SEA 118
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+A+P+ R LA+ GI+L V GRV K+DV Y +K A S +
Sbjct: 119 KSRTIASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEAY--EKPA----SKPAPQQKQ 172
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDAL 318
+ Q ++++ + K +T+ R +V+ +A + F+ E++ A+
Sbjct: 173 QPQAQKAQQSFDKPVEVQKMSRRRQTIAKR-----LVEVQQTSAMLTTFN---EVDMTAV 224
Query: 319 VKLKASFQNNNSDPN-IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+ L+ ++ + N +K F+ K++ A+ KYP +N+ + L
Sbjct: 225 MNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNAEIQGDEL 272
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KW+ KEGD ++ + L ++++K T+E+ S G + +++ A G V VG
Sbjct: 11 GESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGANVAVG 70
Query: 158 ETLLKLVVGDSAVPTPSSDVLESVKP-PGSENSPDSKLNKDTVGGVLATPTVRNLAKLYG 216
E + + G+ AV T S+ E+ KP S+ P+ K V P+V+ L
Sbjct: 71 EEIGDINEGE-AVATNSN---EAAKPQTASQPVPEKVPKKPAVANNTLAPSVQKLVTENK 126
Query: 217 INLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEV 276
++ ++ TGKDGR+ K DVL+ + P+ A+ S + + V
Sbjct: 127 LDPNNIKGTGKDGRITKGDVLE------TMNAPTPAATSTTSSAK------ASEERVERV 174
Query: 277 KWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNN-NSDPNIK 335
+ KT+ R + + + AA + F+ EI+ ++ L+ +++ +K
Sbjct: 175 RMSRLRKTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRGKYKDEFEKKHGVK 226
Query: 336 HTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
F+ +++ A+ P +N+ + + L
Sbjct: 227 LGFMSFFVRATIEALKLIPSVNAEIDGDDL 256
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 26/268 (9%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KWF K G+ + +PL +++DK T+E+ S GK+ +++ G+IV+V
Sbjct: 11 GESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEGDIVEVN 70
Query: 158 ETLLKLVVGDSAVPTPSSDVLESV--KPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLY 215
L + G + + S S+ P E SP S G + P+ L
Sbjct: 71 AVLGFVESGAAGISQSFSPSATSIPEAPSELEQSPSSSATPS--GTMPPAPSAAKLMAEN 128
Query: 216 GINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE----QLLGEEETYPQ 271
I D+ +GK G++LKEDVL A+ +G S A+++A Q + EE
Sbjct: 129 NIAKSDISGSGKRGQILKEDVLG-ALAQGTKASTSVATLTASSSSAAPIQEMREE----- 182
Query: 272 TFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQN-NNS 330
V+ +T+ R + + AA + F+ E++ A++ L+ +++
Sbjct: 183 ---RVRMTKLRQTIA-----RRLKDAQNTAAMLTTFN---EVDMSAVMDLRKRYKDLFEK 231
Query: 331 DPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
+K F+ K++ A+ ++P +N+
Sbjct: 232 KHGVKLGFMGFFTKAVCHALKEFPTVNA 259
>sp|Q49110|ODP2_MYCCT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC 27343 / NCTC
10154) GN=pdhC PE=3 SV=1
Length = 438
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 25/287 (8%)
Query: 92 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 151
V A GEG+ E + + VK GD ++E Q L V++DK EI + GK+A + G
Sbjct: 4 VKFADIGEGLTEGTVAEVLVKVGDVVKEGQSLYFVETDKVNSEIPAPVAGKIAVINIKAG 63
Query: 152 NIVKVGETLLKLVVGD--SAVPTPSSDVLESVKPPGSEN----------SPDSKLNKDTV 199
+KVG+ ++++ G SA P ++ K E S D + K T
Sbjct: 64 QEIKVGDVVMEIEDGSDTSATSEPKAETKSEAKVEVVEENASVVGATPVSNDVIVRKQTT 123
Query: 200 -----GGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPST-- 251
+ ATP R +A I+L V TG + R+L D+ + A A P +
Sbjct: 124 TVNKSSTIKATPLARKVAADLNIDLSLVTPTGPNQRILVADIKNHQASSTQLASQPISQP 183
Query: 252 ASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYV 310
A + Q + + A + W VP+ G ++ VK M+ + +I F +
Sbjct: 184 APTPSPSAHQTIAPTIKVVEPSAPLSW----DEVPMNGVRKATVKAMTKSHTEIAAFTGM 239
Query: 311 EEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMN 357
+ + K++ +++ + IK T+L +IK+++ ++ P +N
Sbjct: 240 KNTDITETHKMRTELKDHAAASGIKLTYLAFIIKAVAKSLRDMPNIN 286
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 48/276 (17%)
Query: 106 LLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165
L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L V+
Sbjct: 19 LARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLIAVL 77
Query: 166 GDSAVPTPSSDVL-------------ESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLA 212
+ T D ++ +E+ + ++ K + + A+P + LA
Sbjct: 78 SEEGESTADIDAFIAKNNSVSLSLKTDTTLKKANESITNVEVVKHDLSKIFASPLAKRLA 137
Query: 213 KLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQT 272
K+ I L V +G GR++K+D+L Y+ PSTA Y +
Sbjct: 138 KIRNIRLESVQGSGPHGRIVKQDILSYS--------PSTA----------------YNRD 173
Query: 273 FAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK--IPHFHYVEEINCDALVKLKASFQNNNS 330
E + P++ R ++ + +K +PHF+ E N D L+ ++ + S
Sbjct: 174 TEEYRSVPNNNI-------RQIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDINKSFS 226
Query: 331 DPNI-KHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+ + K + +I +++ A+ + P N+ + E+++
Sbjct: 227 EDKLTKISVNDFIILAVAKALQEVPNANASWAEDAI 262
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 127/283 (44%), Gaps = 41/283 (14%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLL------HAPGN-- 152
+ E L +W KEGD+I + + +++DKAT+E+ + +G +A+++ + P N
Sbjct: 14 MTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQNVPVNSL 73
Query: 153 ---IVKVGETL--LKLVVGDSAVPTPSSDVL----ESVKPPGSENSPDSKLNKDTVGGVL 203
+++ GE L ++ + + +P + + E++ P + + + V
Sbjct: 74 IAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIAPQNVKEENITTASDQNNIKVF 133
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 263
A+P + LAK+ + + ++ +G GR++K+DVL + KG + S VS + E L
Sbjct: 134 ASPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVLSH---KGGSKALSNKIVSRNPEEYRL 190
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKA 323
+ A+ + + +PHF+ E N D L+ ++
Sbjct: 191 APNNNIRKIIAK--------------------RLLESKQTVPHFYLSIECNVDKLLDIRE 230
Query: 324 SFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+ D + K + +I +++ A+ + P N+ + ++++
Sbjct: 231 DINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWGDDAI 273
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 42/278 (15%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
E L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L
Sbjct: 16 EGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLI 74
Query: 163 LVVG---------DSAVPTPSSDVLESVKPPGSENSPDSKLN----KDTVGGVLATPTVR 209
V+ DS + +S L + S DS N K + A+P +
Sbjct: 75 AVLSEEGEDKADIDSFIAQNNSVSLSLKTDATLKKSNDSITNVEGIKHDSNKIFASPLAK 134
Query: 210 NLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETY 269
LAK+ I L +V +G GR++K+D+L Y ST+S R+ E Y
Sbjct: 135 RLAKIGDIRLENVQGSGPHGRIVKQDILSY--------DSSTSSNKIVYRDT-----EEY 181
Query: 270 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNN 328
++VP ++ + K + + + +PHF+ E N D L+ ++ +
Sbjct: 182 -------------RSVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDVREDINKS 228
Query: 329 NSDPNI-KHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
S+ + K + +I +++ A+ + P N+ ++E+++
Sbjct: 229 FSEDKVTKISVNDFIILAVAKALQEVPNANASWSEDAI 266
>sp|P06959|ODP2_ECOLI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Escherichia coli (strain K12)
GN=aceF PE=1 SV=3
Length = 630
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 32/287 (11%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
E E+ + VK GD++ Q L V+ DKA++E+ + + G V +L G+ VK G ++
Sbjct: 218 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMI 277
Query: 163 LVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------VLATPTVRNLA 212
V +A + + P ++ + G V ATP +R LA
Sbjct: 278 FEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLA 337
Query: 213 KLYGINLYDVDATGKDGRVLKEDV---LKYAVQKGAADGPSTASVSADCREQLLGEEETY 269
+ +G+NL V TG+ GR+L+EDV +K A+++ A +T G
Sbjct: 338 REFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGG----------GIPGML 387
Query: 270 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNN 328
P + + + + V L Q+ +S IPH + ++ + + +L+A +
Sbjct: 388 PWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTD---ITELEAFRKQQ 444
Query: 329 NSDP-----NIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 370
N + ++K T + ++K+++ A+ + P NS +E+ + LK
Sbjct: 445 NEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLK 491
Score = 38.5 bits (88), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E E+ + VK GD++E Q L V+ DKA++E+ + + G V ++ G+ V G
Sbjct: 114 GSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSL 173
Query: 160 LL 161
++
Sbjct: 174 IM 175
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E E+ + VK GD++E Q L V+ DKA++E+ S G V ++ + G+ + G
Sbjct: 11 GADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGAL 70
Query: 160 LL 161
++
Sbjct: 71 IM 72
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 52/287 (18%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETL 160
+ E L +W KEGD++ + + +++DKAT+E+ + +G +A+++ P N V
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV-IPQNSQNVPVNS 72
Query: 161 LKLVV----------------GDSAVPTPSSDVLESVKPPGSENSPDSK----LNKDTVG 200
L V+ +S P+P +D + P EN + + + K V
Sbjct: 73 LIAVLSEEGEEKTDIDAFIAKNNSVSPSPKTD---ANLPKPHENIANVEEQVTVIKHDVS 129
Query: 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
+ A+P + LAK+ I V +G GR++K+D+L Y PSTA R
Sbjct: 130 RIFASPLAKRLAKMRNIRFESVKGSGPHGRIVKQDILSYT--------PSTAHNKIVSRN 181
Query: 261 QLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALV 319
P+ + + VP ++ + K + + + +PHF+ E N D L+
Sbjct: 182 ---------PEEY---------RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLL 223
Query: 320 KLKASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
++ S D + + + +I +++ A+ + P N+ + E+++
Sbjct: 224 DIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWGEDAI 270
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 46/284 (16%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETL 160
+ E L +W KEGD++ + + +++DKAT+E+ + +G +A+++ P N V
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV-IPQNSQNVPVNS 72
Query: 161 LKLVVGDSAVPTPSSDVL------ESVKPPGSENSPDSKLN-----------KDTVGGVL 203
L V+ + D S P N P N K +
Sbjct: 73 LIAVLSEEGEEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQVAVIKHDASKIF 132
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 263
A+P + LAK+ I L V +G GR++K+D+L Y PST R
Sbjct: 133 ASPLAKRLAKMGNIRLESVKGSGPHGRIVKQDILSYT--------PSTVHNKIVSRN--- 181
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLK 322
P+ + + VP ++ + K + + + +PHF+ E N D L+ ++
Sbjct: 182 ------PEEY---------RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIR 226
Query: 323 ASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+ S D + + + +I +++ A+ + P N+ + E+++
Sbjct: 227 EDINKSFSEDKSTRISVNDFIILAVAKALQELPNANASWGEDAI 270
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
>sp|Q2FYM2|ODO2_STAA8 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain NCTC 8325) GN=odhB PE=3 SV=1
Length = 422
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
>sp|Q2FH26|ODO2_STAA3 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain USA300) GN=odhB PE=3 SV=1
Length = 422
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
>sp|P10802|ODP2_AZOVI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Azotobacter vinelandii PE=1
SV=3
Length = 638
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 17/266 (6%)
Query: 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLL 161
+ +++ VK GD+++ Q L ++SDKA++EI S G V + V G+ +L
Sbjct: 234 GKARVIEVLVKAGDQVQAEQSLIVLESDKASMEIPSPAAGVVESVAVQLNAEVGTGDQIL 293
Query: 162 KLVVGDSAVPTP---SSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGIN 218
L V +A P S + P + V A P VR LA+ +G+
Sbjct: 294 TLRVAGAAPSGPRARGSPGQAAAAPGAAPAPAPVGAPSRNGAKVHAGPAVRQLAREFGVE 353
Query: 219 LYDVDATGKDGRVLKEDVLKYA---VQKGAADGPSTASVSADCREQLLGEEETYPQTFAE 275
L +++TG GR+LKEDV Y +QK + A+ A P FA+
Sbjct: 354 LAAINSTGPRGRILKEDVQAYVKAMMQKAKEAPAAGAASGAGI-------PPIPPVDFAK 406
Query: 276 VKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNNNSDPNI 334
Y + + VP+ + + + +PH E + L + + + +
Sbjct: 407 ---YGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEKAGV 463
Query: 335 KHTFLPSLIKSLSMAMSKYPFMNSCF 360
K T LP L+K+ + + + P NS
Sbjct: 464 KLTVLPLLLKACAYLLKELPDFNSSL 489
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLL 161
+ +++ VK GD+++ Q L ++SDKA++EI S G V + V G+ +L
Sbjct: 129 GKARVIEVLVKAGDQVQAEQSLIVLESDKASMEIPSPASGVVESVAIQLNAEVGTGDLIL 188
Query: 162 KL 163
L
Sbjct: 189 TL 190
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KW+ KEGD ++ + L ++++K T+E+ + G + ++ G V VG
Sbjct: 11 GESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTDGANVAVG 70
Query: 158 ETLLKLVVG---DSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKL 214
E + ++ G ++A S ++V P SE P K V +LA P+V+ L
Sbjct: 71 EEIGEINEGAAANTAGTNNESAKAQAVTQPTSE-KPVEK--PAVVNNILA-PSVQKLVTE 126
Query: 215 YGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFA 274
++ ++ TG+DGR+ K DVL+ AA T + + + R Q
Sbjct: 127 NKLDPNNIKGTGRDGRITKGDVLETINTPSAATSTPTVNKTNEERVQ------------- 173
Query: 275 EVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPN- 333
V+ KT+ R + + + AA + F+ EI+ ++ L+ ++ +
Sbjct: 174 RVRMSRLRKTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRNQYKEEFEKKHL 225
Query: 334 IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
+K F+ +K+ A+ P +N+ + + L
Sbjct: 226 VKLGFMSFFVKATIEALKLIPSVNAEIDGDDL 257
>sp|Q6GGZ6|ODO2_STAAR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MRSA252) GN=odhB PE=3 SV=1
Length = 423
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVGDSA-----------VPTPSSDVLESVKPPGSENSPD----SKLN 195
G+ V+VG+ + V+G+ + P + + + K + S D ++ N
Sbjct: 63 GDTVEVGQAI--AVIGEGSGNASKENSNDNTPQQNDETTNNKKEETTNKSADKAEVNQTN 120
Query: 196 KDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVS 255
D V ATP+ R A+ G+NL +V D V KED+ K Q+ A +T
Sbjct: 121 DDNQQRVNATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQAP 177
Query: 256 ADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHY 309
A EE+ Y Q YP + + +R +++ + A + F+
Sbjct: 178 A-------KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNE 223
Query: 310 VEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 365
V+ N L K K + D K F+ K+ A+ KYP +N+ + + +
Sbjct: 224 VDMTNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM 278
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lat1 PE=3 SV=1
Length = 483
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 79 HALADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITS 137
+A + PA ++++P L+ T + + + K GD+IE LC +++DKA I+
Sbjct: 45 YATKNYPAHTVINMPALSPT---MTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQ 101
Query: 138 RYKGKVAQLLHAPGNI-VKVGETLLKLV-------------VGDSAVPTPSSDVLESVKP 183
+ +G +A++L G V VG+ L V + DS+ PS+ E
Sbjct: 102 QDEGYLAKILIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEPSAKSGEEKSA 161
Query: 184 PGSENSPDSKLNKDTVGG------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVL 237
P SE + V G V A+P R LA+ ++L + +G +GR++K D+
Sbjct: 162 PSSEKQSKETSSPSNVSGEERGDRVFASPLARKLAEEKDLDLSQIRGSGPNGRIIKVDIE 221
Query: 238 KYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKT 297
+ P A ++ A Y D +PL ++ +
Sbjct: 222 NFK--------PVVAPKPSNEAAAKATTPAASAADAAAPGDYED---LPLSNMRKIIASR 270
Query: 298 MSMAAKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFM 356
++ + + PH++ +N + +++L+A+ N +D K + +IK+ + A+ + P +
Sbjct: 271 LAESKNMNPHYYVTVSVNMEKIIRLRAAL-NAMADGRYKLSVNDLVIKATTAALRQVPEV 329
Query: 357 NSCF 360
N+ +
Sbjct: 330 NAAW 333
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESV-------KPPGSENSPDSKLNKDTVGG 201
G+ V+VG+ + VVG+ V T + ES K +++P+S +++T
Sbjct: 61 EEGDTVEVGQAV--AVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 202 ----VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD 257
+ ATP+ R A+ G++L +V G D VL++D ++ + QK S+ + ++
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKDDVENS-QK-----SSSQTAKSE 170
Query: 258 CREQLLGEEETYPQTFAEV---KWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEIN 314
+ Q G ++T V K KT + +++ + A + F+ V+ N
Sbjct: 171 SKSQNSGSKQTNNNPSKPVIREKMSRRKKTAA-----KKLLEVSNQTAMLTTFNEVDMTN 225
Query: 315 CDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 VMDLRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNA 268
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE I E + KW+ K+GD ++ + L ++++K T+E+ + G + ++ G V VG
Sbjct: 11 GESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISKTEGANVAVG 70
Query: 158 ETLLKLVVGDSAVPTPSSD---VLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKL 214
E + ++ G SA +++ ++V P SE K V P+V+ L
Sbjct: 71 EEIGEINEGASANTAGTNNESAKAQAVTQPTSE--------KPAVANNTLAPSVQKLVTE 122
Query: 215 YGINLYDVDATGKDGRVLKEDVL 237
++ ++ TG+DGR+ K DVL
Sbjct: 123 NKLDPNNIKGTGRDGRITKGDVL 145
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 24/281 (8%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESV-------KPPGSENSPDSKLNKDTVGG 201
G+ V+VG+ + VVG+ V T + ES K +++P+S +++T
Sbjct: 61 EEGDTVEVGQAV--AVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 202 ----VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD 257
+ ATP+ R A+ G++L +V G D VL++D ++ + QK ++ + S S +
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKDDVENS-QKSSSQTAKSESKSQN 175
Query: 258 CREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDA 317
+ + P K KT + +++ + A + F+ V+ N
Sbjct: 176 SGSKQSNNNPSKP--VIREKMSRRKKTAA-----KKLLEVSNQTAMLTTFNEVDMTNVMD 228
Query: 318 LVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
L K K + D K F+ K+ A+ KYP +N+
Sbjct: 229 LRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNA 268
>sp|Q7A5N4|ODO2_STAAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain N315) GN=odhB PE=1 SV=1
Length = 422
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T A
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQAPAK- 178
Query: 259 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQR------TMVKTMSMAAKIPHFHYVEE 312
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 179 ------EEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 313 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNS 358
N L K K + D K F+ K+ A+ KYP +N+
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNA 270
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,576,649
Number of Sequences: 539616
Number of extensions: 5948090
Number of successful extensions: 17441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 17165
Number of HSP's gapped (non-prelim): 169
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)