Citrus Sinensis ID: 017419

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
MATASMFLAISTLVFLFFISSSSAADMSIISYDNNHDHSSSWRTDDEVMTIYQTWLAKHGKTSNGMGHNEKRFQIFKDNLRFIDEHNSLNRTYKVGLNKFADLTNEEYRAMYLGTRSDAKRRLMKSKVASQRYACKAGDELPESVDWREKGAVNPVKDQGSCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRKINAGCNGGLMDYAFQFIIQNGGMDSEQDYPYLGAENKCDPSRRNAKVVSIDGYEDVSPFDEMSLKKAVADQPVSVAIEAGGRAFQHYESGVFTGECGSALDHGVVAVGYGTENGVDYWLVRNSWGSDWGENGYVKLQRNLLDTNTGKCGIAMEASYPVKNSQNSAKPKPHSSA
ccccHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHccccccHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEECccEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEEccccccccccccccccccccccccccccccccccc
*****MFLAISTLVFLFFISSSSAADMSIISYDN******SWRTDDEVMTIYQTWLAKHGKTSNGMGHNEKRFQIFKDNLRFIDEHNSLNRTYKVGLNKFADLTNEEYRAMYLGT*******************CKAGDELPESVDWREKGAVNPVKDQGSCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRKINAGCNGGLMDYAFQFIIQNGGMDSEQDYPYLGAENKCDPSRRNAKVVSIDGYEDVSPFDEMSLKKAVADQPVSVAIEAGGRAFQHYESGVFTGECGSALDHGVVAVGYGTENGVDYWLVRNSWGSDWGENGYVKLQRNLLDTNTGKCGIAMEASYPV***************
xxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATASMFLAISTLVFLFFISSSSAADMSIISYDNNHDHSSSWRTDDEVMTIYQTWLAKHGKTSNGMGHNEKRFQIFKDNLRFIDEHNSLNRTYKVGLNKFADLTNEEYRAMYLGTRSDAKRRLMKSKVASQRYACKAGDELPESVDWREKGAVNPVKDQGSCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRKINAGCNGGLMDYAFQFIIQNGGMDSEQDYPYLGAENKCDPSRRNAKVVSIDGYEDVSPFDEMSLKKAVADQPVSVAIEAGGRAFQHYESGVFTGECGSALDHGVVAVGYGTENGVDYWLVRNSWGSDWGENGYVKLQRNLLDTNTGKCGIAMEASYPVKNSQNSAKPKPHSSA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cathepsin L1 Important for the overall degradation of proteins in lysosomes.probableP06797
Cathepsin L1 Important for the overall degradation of proteins in lysosomes.probableP25975
Cathepsin L1 Important for the overall degradation of proteins in lysosomes.probableQ9GL24

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.22.-Cysteine endopeptidases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1S4V, chain A
Confidence level:very confident
Coverage over the Query: 140-363
View the alignment between query and template
View the model in PyMOL
Template: 3QJ3, chain A
Confidence level:very confident
Coverage over the Query: 43-358
View the alignment between query and template
View the model in PyMOL