Your job contains 1 sequence.
>017421
MFVTASGVDFDEMGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKL
KSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPV
DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD
QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR
ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL
LLTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHILFSGYL
HNDHNHRCARKY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017421
(372 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139335 - symbol:AT4G03020 "AT4G03020" species... 1169 9.8e-119 1
ZFIN|ZDB-GENE-050809-116 - symbol:dcaf11 "ddb1 and cul4 a... 359 1.1e-32 1
UNIPROTKB|Q8TEB1 - symbol:DCAF11 "DDB1- and CUL4-associat... 349 1.7e-31 1
UNIPROTKB|F1SGL8 - symbol:DCAF11 "Uncharacterized protein... 348 2.2e-31 1
UNIPROTKB|Q5R7H5 - symbol:DCAF11 "DDB1- and CUL4-associat... 348 2.2e-31 1
UNIPROTKB|F1MVT2 - symbol:DCAF11 "DDB1- and CUL4-associat... 345 4.8e-31 1
UNIPROTKB|Q5E9I8 - symbol:DCAF11 "DDB1- and CUL4-associat... 345 4.8e-31 1
RGD|1311288 - symbol:Dcaf11 "DDB1 and CUL4 associated fac... 345 4.9e-31 1
MGI|MGI:90168 - symbol:Dcaf11 "DDB1 and CUL4 associated f... 344 6.4e-31 1
ASPGD|ASPL0000074293 - symbol:AN4800 species:162425 "Emer... 315 2.1e-27 1
DICTYBASE|DDB_G0291832 - symbol:wdr23 "WD40 repeat-contai... 151 1.9e-16 2
FB|FBgn0034527 - symbol:CG9945 species:7227 "Drosophila m... 204 1.0e-13 1
WB|WBGene00008419 - symbol:wdr-23 species:6239 "Caenorhab... 204 1.3e-13 1
UNIPROTKB|P90794 - symbol:wdr-23 "DDB1- and CUL4-associat... 204 1.3e-13 1
UNIPROTKB|A8XEN7 - symbol:wdr-23 "DDB1- and CUL4-associat... 187 1.1e-11 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 147 9.7e-08 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 139 6.8e-07 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 139 7.3e-07 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 139 8.1e-07 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 139 8.1e-07 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 139 8.1e-07 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 139 8.1e-07 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 138 1.0e-06 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 136 1.8e-06 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 136 1.8e-06 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 136 1.8e-06 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 135 2.3e-06 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 139 2.9e-06 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 113 1.1e-05 2
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 131 1.8e-05 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 108 2.8e-05 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 104 2.9e-05 2
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 129 2.9e-05 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 129 2.9e-05 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 129 2.9e-05 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 129 2.9e-05 1
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 128 3.7e-05 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 125 5.8e-05 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 109 6.0e-05 2
WB|WBGene00004895 - symbol:smu-1 species:6239 "Caenorhabd... 126 6.2e-05 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 124 7.5e-05 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 122 7.6e-05 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 128 7.6e-05 2
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 122 8.3e-05 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 124 0.00010 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 126 0.00011 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 113 0.00014 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 113 0.00014 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 113 0.00014 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 113 0.00014 2
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 117 0.00014 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 113 0.00014 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 119 0.00018 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 120 0.00021 2
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 120 0.00021 2
UNIPROTKB|C9JXA5 - symbol:GNB2 "Guanine nucleotide-bindin... 116 0.00021 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 116 0.00022 2
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 121 0.00023 1
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 117 0.00024 1
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 117 0.00032 1
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 117 0.00032 1
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 117 0.00032 1
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 117 0.00032 1
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 117 0.00032 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 116 0.00033 1
UNIPROTKB|Q9NSS8 - symbol:DKFZp434D199 "Putative uncharac... 96 0.00034 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 102 0.00035 2
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 119 0.00037 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 118 0.00038 1
UNIPROTKB|Q8NAA4 - symbol:ATG16L2 "Autophagy-related prot... 120 0.00038 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 102 0.00044 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 109 0.00056 2
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 101 0.00058 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 118 0.00061 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 121 0.00074 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 114 0.00075 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 114 0.00076 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 114 0.00076 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 114 0.00076 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 114 0.00076 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 114 0.00076 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 114 0.00085 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 96 0.00088 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 112 0.00089 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 113 0.00090 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 114 0.00095 1
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 227/298 (76%), Positives = 255/298 (85%)
Query: 1 MFVTASGVDFDEMGYAMSRFEIESEFYDAA-DTVNQASNSRS-KFKKPLSALDHEIAQLT 58
MF S D DEMGYAMSR EIES+ D D S+S S + + L+ LDHEI+Q+T
Sbjct: 1 MFFGPSEFDADEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVT 60
Query: 59 KLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPW 118
KLKS P + +S+EVPG+ LPVSTV+MLAGRE N+SGRGRFSAADCCHMLSRYLP GPW
Sbjct: 61 KLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPW 120
Query: 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178
VDQ SRAYVSQFS DGSLF+AGFQ S+IRIY+VE+GWK+QKDILAKSLRWTVTDTSLS
Sbjct: 121 LVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLS 180
Query: 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD 238
PDQR+LVYASMSPIVHIVDVGSG+ ES ANVTEIHDGLDFS+ +DGGYSFGIFS+KFSTD
Sbjct: 181 PDQRNLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTD 240
Query: 239 GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
GRE+VAGSSDD IYVYDLEAN++SLR +AHTSDVNTVCF DESG+LI SGSDDNLCKV
Sbjct: 241 GREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKV 298
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 359 (131.4 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 79/217 (36%), Positives = 121/217 (55%)
Query: 81 STVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV 140
S MLA RE FS +C + S +LP + + D + + +S +G++F+
Sbjct: 134 SFTHMLAEREQGRCRGSSFSHGECSRIRSHFLPNHVVYK-DTYQQKVFCGVYSDEGNMFL 192
Query: 141 AGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199
+ Q IR+YD RG + ++K + A+ + W++ D +PD R ++Y+S S +H+ V
Sbjct: 193 SACQDQNIRLYDTSRGRFTLKKTVKARDVGWSILDVCFTPDARCVLYSSWSDYIHVCSVD 252
Query: 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259
E H LD + D+ F +FSL STDG+E++ G++D C+YV+D E N
Sbjct: 253 GDN--------ETHTALDLNP-DER--RFCVFSLAASTDGKEILGGANDGCLYVFDREQN 301
Query: 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
K +L+I AH DVN V F D S L++SGSDD LCKV
Sbjct: 302 KRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKV 338
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 349 (127.9 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 77/215 (35%), Positives = 121/215 (56%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N D + +A+ +S DG +F++
Sbjct: 133 RMLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 300 TLQIESHEDDVNAVAFADISSQILFSGGDDAICKV 334
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 348 (127.6 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 76/215 (35%), Positives = 120/215 (55%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N +D + +A+ +S DG +F++
Sbjct: 133 QMLLQRERGLCHRGSFSLGEQSRVMSHFLP-NDLGFIDTYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G + K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQVIRMYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD + F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRPVER---RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 300 TLQIESHEDDVNAVAFADMSSQILFSGGDDAICKV 334
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 348 (127.6 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 77/215 (35%), Positives = 121/215 (56%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N D + +A+ +S DG +F++
Sbjct: 133 RMLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGSHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 300 TLQIESHEDDVNAVAFADISSQILFSGGDDAICKV 334
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 345 (126.5 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 77/219 (35%), Positives = 123/219 (56%)
Query: 80 VSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF 139
+S +ML RE +G FS + ++S +LP N D + +A+ +S DG +F
Sbjct: 129 LSFPQMLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIF 187
Query: 140 VAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++
Sbjct: 188 MSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNI 247
Query: 199 -GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E
Sbjct: 248 YGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDRE 295
Query: 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
N+ +L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 296 QNRRTLQIESHEDDVNAVAFADVSSQILFSGGDDAICKV 334
>UNIPROTKB|Q5E9I8 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 EMBL:BT020932 IPI:IPI00710208
RefSeq:NP_001014954.1 UniGene:Bt.20137 ProteinModelPortal:Q5E9I8
STRING:Q5E9I8 GeneID:539433 KEGG:bta:539433 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 InParanoid:Q5E9I8 KO:K11801
OrthoDB:EOG44TP7K NextBio:20877986 InterPro:IPR017399
PIRSF:PIRSF038135 Uniprot:Q5E9I8
Length = 546
Score = 345 (126.5 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 77/219 (35%), Positives = 123/219 (56%)
Query: 80 VSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF 139
+S +ML RE +G FS + ++S +LP N D + +A+ +S DG +F
Sbjct: 129 LSFPQMLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIF 187
Query: 140 VAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++
Sbjct: 188 MSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNI 247
Query: 199 -GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E
Sbjct: 248 YGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDRE 295
Query: 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
N+ +L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 296 QNRRTLQIESHEDDVNAVAFADVSSQILFSGGDDAICKV 334
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 345 (126.5 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 87/288 (30%), Positives = 146/288 (50%)
Query: 14 GYAMSRFEIESEFYDAADTVNQASNSR--SKFKKPLSAL-DHEIAQLTKLKSEPKEHFSK 70
G + ++ D+ + + A + R ++ P+ A D + ++K+ + +
Sbjct: 60 GGGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELEYNEIKTRVELATGR 119
Query: 71 EVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVS 130
G+ S +ML RE RG FS + ++S +LP N D + +A+
Sbjct: 120 LGLGRTAQEHSFPRMLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCG 178
Query: 131 QFSADGSLFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM 189
+S DG +F++ Q IR+YD G + K I A+ + W+V D + +PD H +Y+S
Sbjct: 179 IYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSW 238
Query: 190 SPIVHIVDV-GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248
S +HI + G G + H LD D+ F +FS+ S+DGRE++ G++D
Sbjct: 239 SDYIHICSIYGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGAND 286
Query: 249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
C+YV+D E N+ +L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 287 GCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKV 334
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 344 (126.2 bits), Expect = 6.4e-31, P = 6.4e-31
Identities = 79/221 (35%), Positives = 122/221 (55%)
Query: 78 LPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS 137
L S +ML RE RG FS + ++S +LP N D + +A+ +S DG
Sbjct: 127 LQQSFPQMLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCGIYSKDGQ 185
Query: 138 LFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196
+F++ Q IR+YD G + K I A+ + W+V D + +PD H +Y+S S +HI
Sbjct: 186 IFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHIC 245
Query: 197 DV-GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255
++ G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D
Sbjct: 246 NIYGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFD 293
Query: 256 LEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
E N+ +L+I +H DVN V F D S +++SG DD +CKV
Sbjct: 294 REQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKV 334
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 315 (115.9 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 69/177 (38%), Positives = 99/177 (55%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERG--WKIQKDILAKSLRWTVTDTSLSPDQR 182
++ Y QFS DG+ F + Q ++R+YD WK K + WT+TD +LSPD R
Sbjct: 230 AKCYSGQFSDDGNFFFSCAQDFKVRMYDTSNPYEWKYYKTVDYPLASWTITDATLSPDNR 289
Query: 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD--GGYSFGIFSLKFSTDGR 240
L Y+S+ +V + S + ++ A D G F ++S++FS DGR
Sbjct: 290 FLAYSSLRQLVCLAPTDPAD-SSDPIILDLASSAQRRVARDIFGRDGFAVWSVRFSGDGR 348
Query: 241 ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-HLIYSGSDDNLCKV 296
E+VAG+ D + VYDLE + LRI H DVN VCFGD+S H++YSGSDD+ +V
Sbjct: 349 EIVAGTGDHSVIVYDLETRQSVLRIRNHEDDVNAVCFGDKSSPHILYSGSDDSTVRV 405
>DICTYBASE|DDB_G0291832 [details] [associations]
symbol:wdr23 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291832 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AAFI02000185 KO:K11801
RefSeq:XP_629959.1 ProteinModelPortal:Q54E28
EnsemblProtists:DDB0237531 GeneID:8628365 KEGG:ddi:DDB_G0291832
InParanoid:Q54E28 OMA:NIRISQH ProtClustDB:CLSZ2429513
Uniprot:Q54E28
Length = 661
Score = 151 (58.2 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYS 287
F +F LKFS + +E++ G S+ I +YDLE ++ H DVN+VC+ D +G++ +
Sbjct: 383 FCVFGLKFSPNNKEILCGCSNGEIIIYDLEGRQVVNHFRGHGRDVNSVCYLDHTGNIFVT 442
Query: 288 GSDDNLCKV 296
GSDD+L +V
Sbjct: 443 GSDDSLIRV 451
Score = 129 (50.5 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 111 YLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW 170
YLP+N V SR + + ++DG + Q IRI++ +I K+I A + W
Sbjct: 248 YLPMNRAETVISMPSRIFCCKITSDGKRLMTASQDKMIRIFNTSNFEQI-KEIQAIDINW 306
Query: 171 TVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ DT SPDQ L+Y+S S + + V
Sbjct: 307 SIIDTDYSPDQNWLIYSSWSHYIQLCRV 334
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 231 FSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
FS +T + + +GS + IY+YD+ KL
Sbjct: 571 FSPIETTAQKYIYSGSFNGMIYIYDVLTGKL 601
Score = 42 (19.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 22/86 (25%), Positives = 33/86 (38%)
Query: 239 GRELVAGSSDDCIYVYDL-------------EANKLSLRILAHTSDVNTVCFGDESGHLI 285
G V GS D I V+D ++NK H + VC D+ G +
Sbjct: 437 GNIFVTGSDDSLIRVWDKRSLDKSGSGSGSGDSNKPVGTFTGHYQGLTHVCSKDD-GTYV 495
Query: 286 YSGSDDNLCKVNSVLLLTRSINPCNK 311
S S D K+ + ++ NP +K
Sbjct: 496 LSNSKDQTAKLWDIRKMS---NPTSK 518
>FB|FBgn0034527 [details] [associations]
symbol:CG9945 species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 HSSP:P16649 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:AY075228 RefSeq:NP_611494.1 RefSeq:NP_725981.1 UniGene:Dm.5593
SMR:Q7JYQ4 STRING:Q7JYQ4 EnsemblMetazoa:FBtr0086225
EnsemblMetazoa:FBtr0086226 GeneID:37329 KEGG:dme:Dmel_CG9945
UCSC:CG9945-RA FlyBase:FBgn0034527 InParanoid:Q7JYQ4
OrthoDB:EOG4Q83CM GenomeRNAi:37329 NextBio:803134 Uniprot:Q7JYQ4
Length = 511
Score = 204 (76.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 72/303 (23%), Positives = 135/303 (44%)
Query: 10 FDEMGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFS 69
F+ + + ++ ++ S++ + V + KF+K + + EI + L S P ++
Sbjct: 26 FNVINFTVNAMDLRSDYCSSEMPVIRGKPDLVKFQK--TDMYKEIQASSGLVSNPNNRWN 83
Query: 70 KEVPGKRHLPVSTVKMLAGREGNYSG--RGRFSAADCCHMLSRYLPVNGPWPVDQTTSRA 127
V L RE + FS ++ + Y+P + S+
Sbjct: 84 ------------LVHALQQRENGLASPHSASFSKNQQRYISNLYIPNKKATRLMSLESKI 131
Query: 128 YVSQFSADGSLFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186
+V++F+ GS + Q +RIYD +G + + I A+ + W++ D SP+ H Y
Sbjct: 132 FVTKFNRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAY 191
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
++ S + I+ V G E +++ GL + IFSL++S G +++ GS
Sbjct: 192 STWSRSLFIMPVNGG--EDDCQWIDVN-GLP-------SHRLAIFSLRYSPTGDKIIGGS 241
Query: 247 SDDCIYVYDLEANKLSLRILAHT---SDVNTVCF-GDESGHLIYSGSDDNLCKVNSVLLL 302
++ + V D+ + + H DVN+VCF D+ ++I +G DD L KV +
Sbjct: 242 NNSTVIVTDIRTRNTQI-LRTHRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTT 300
Query: 303 TRS 305
RS
Sbjct: 301 FRS 303
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/231 (26%), Positives = 109/231 (47%)
Query: 74 GKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFS 133
G R + ++ + R+ G + +L+ +LP N VD+ ++++ +Q+
Sbjct: 115 GPRPSTSNNMEFILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYI 173
Query: 134 ADGSLFVAGFQASQIRIY--DVERGWKIQKDILAKSLR-----WTVTDTSLSPDQRHLVY 186
+G+ V Q +IR Y + ++ K + + LR W++ DT++S + + Y
Sbjct: 174 QNGTKIVVASQDEKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAY 233
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
+ V VG N+T +D + + G +F +KFS ++V G+
Sbjct: 234 GTWKDAVF---VGKLDFTERQNITWFP--IDLNG-EPGRDHCAVFCVKFSDSSEQIVCGT 287
Query: 247 SDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S I+V+D+E + I+ AH DVN+VCF D +LIYS DD L KV
Sbjct: 288 SQYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKV 338
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/231 (26%), Positives = 109/231 (47%)
Query: 74 GKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFS 133
G R + ++ + R+ G + +L+ +LP N VD+ ++++ +Q+
Sbjct: 115 GPRPSTSNNMEFILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYI 173
Query: 134 ADGSLFVAGFQASQIRIY--DVERGWKIQKDILAKSLR-----WTVTDTSLSPDQRHLVY 186
+G+ V Q +IR Y + ++ K + + LR W++ DT++S + + Y
Sbjct: 174 QNGTKIVVASQDEKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAY 233
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
+ V VG N+T +D + + G +F +KFS ++V G+
Sbjct: 234 GTWKDAVF---VGKLDFTERQNITWFP--IDLNG-EPGRDHCAVFCVKFSDSSEQIVCGT 287
Query: 247 SDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S I+V+D+E + I+ AH DVN+VCF D +LIYS DD L KV
Sbjct: 288 SQYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKV 338
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 57/206 (27%), Positives = 98/206 (47%)
Query: 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI 159
++A H+L+ +LP N VDQ ++ + +Q+ +G V Q + + + KI
Sbjct: 118 TSASRAHLLNTHLP-NKKRRVDQLRTKNFCAQYIQNGRKMVVSSQGERENSFLSTKSGKI 176
Query: 160 QKDILAKSLRWTVT--------DTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTE 211
+ + S++ T DT+++ + Y + V+I G E N+T
Sbjct: 177 EISLPILSMQRTPCGPLQLVDLDTAVNQQGDLISYCTWKDAVYI---GRMEQEDNQNITW 233
Query: 212 IHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTS 270
+D+ +F ++FS D ++V G+S+ I+V+D+E + I+ AH
Sbjct: 234 FP--IDWHGEHAVQNQCAVFCVRFSDDSEQIVCGTSEYSIHVFDVEQRRRIRTIVNAHED 291
Query: 271 DVNTVCFGDESGHLIYSGSDDNLCKV 296
DVN+VCF D +LIYS DD L KV
Sbjct: 292 DVNSVCFADYGSNLIYSAGDDGLVKV 317
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 147 (56.8 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FSTD
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSTDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSV 256
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 139 (54.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 84 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 140
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 141 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 184
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 185 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 238
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 139 (54.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 139 (54.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 139 (54.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 139 (54.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 139 (54.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQK-DILAKSLRWTVTDTSLSPDQRHLV 185
A+ FS D G ++ I+ VE G K D K + + SPD ++L
Sbjct: 109 AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKF----ILSIAYSPDGKYLA 164
Query: 186 YASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245
++ I++I D+ +G + +H L+ G++ I SL FS D + LV
Sbjct: 165 SGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDSQLLVTA 208
Query: 246 SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
S D I +YD++ L+ + H S V +V F + H + S SD ++
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSI 256
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSV 256
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +YD++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/174 (25%), Positives = 78/174 (44%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FS D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSPDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ LV S D I +Y+++ L+ + H S V V F + H + S SD ++
Sbjct: 203 QLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSV 256
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI---QKDILAKSLRWTVTDTS 176
++ T+ YV +FSADG G + + +++VE G I Q++ + V +
Sbjct: 296 LEHTSVICYV-RFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVA 353
Query: 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS 236
SPD ++L + I D+ + L G+ I+SL FS
Sbjct: 354 FSPDGKYLATGVEDQQIRIWDIAQKRVYRLLT----------------GHEQEIYSLDFS 397
Query: 237 TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD-VNTVCFGDESGHLIYSGSDDNLCK 295
DG+ LV+GS D + ++D+EA + L IL HT D V TV F + G I +GS D + +
Sbjct: 398 KDGKTLVSGSGDRTVCLWDVEAGEQKL-IL-HTDDGVTTVMFSPD-GQFIAAGSLDKVIR 454
Query: 296 V 296
+
Sbjct: 455 I 455
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 113 (44.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + S+ FS DG++L + SSD I +++ +L H + V F + HL
Sbjct: 958 GHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL 1017
Query: 285 IYSGSDDNLCKV 296
+ SGSDDN K+
Sbjct: 1018 V-SGSDDNTIKL 1028
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+ I ++ FS DG+ LV+GS D+ I ++DL ++L + H+ V+ V F + L
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQL 1059
Query: 285 IYSGSDDNL 293
S D +
Sbjct: 1060 ASSSLDSTI 1068
Score = 73 (30.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/168 (25%), Positives = 67/168 (39%)
Query: 72 VPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRY--LP-VNGPWPVDQTTSRAY 128
V RHL + L +S G + + LS + LP V W +Q T +
Sbjct: 690 VLNNRHLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENH 749
Query: 129 VSQ-----FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRH 183
+ FS DG V+G ++I+D G +Q + S TV + SPD +
Sbjct: 750 LGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQT-LDGHS--GTVESLAFSPDGKL 806
Query: 184 LVYASMSPIVHIVDVGSG----TME----SLANVTEIHDGLDFSAADD 223
L S + + D +G T E S+ +V DG + ++A D
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASD 854
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191
F+ DG + S I+I+D+ G ++Q+ + + S +V + SPD + L +S+
Sbjct: 842 FAPDGKELASASDDSTIKIWDLATG-ELQQTLDSHSQ--SVRSVAFSPDGKLLASSSLDS 898
Query: 192 IVHIVDVGSGTME 204
+ + + +G ++
Sbjct: 899 TIKVWNPATGELQ 911
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/175 (26%), Positives = 75/175 (42%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CMC-FSRDTEML--ATGAQDGKIKVWKIQSGQCLRRFERA-HSKGVTCLSFSKDSSQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSV 299
S D I ++ L++ K H+S VN F + GH I S S D KV +V
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATF-TQDGHYIISASSDGTVKVWNV 378
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 108 (43.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+ ++ + +S D R LV+GSSD + V+D++A KLS + H +V V + + G
Sbjct: 413 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPD-GQR 471
Query: 285 IYSGSDDNLCKV 296
+ SG D ++
Sbjct: 472 VASGGKDKCLRI 483
Score = 64 (27.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS-----LSPDQRHLVY 186
+S DG +G + QI ++D G ++ + + S +W +T S +P+ R++
Sbjct: 165 WSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHS-KW-ITALSWEPLHANPECRYVAS 222
Query: 187 ASMSPIVHIVDVGSGTME-SLA----NVTEIH---DGLDFSAADD 223
+S V + D +G E +L +VT + DGL +SA+ D
Sbjct: 223 SSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQD 267
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 104 (41.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD 291
+ SGS D
Sbjct: 204 LASGSSD 210
Score = 55 (24.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/172 (26%), Positives = 73/172 (42%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CMC-FSRDTEML--ATGAQDGKIKVWKIQSGQCLRRFERA-HSKGVTCLSFSKDSSQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S D I ++ L++ K H+S VN F + GH I S S D K+
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATF-TQDGHYIISASSDGTVKI 375
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/172 (26%), Positives = 73/172 (42%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CMC-FSRDTEML--ATGAQDGKIKVWKIQSGQCLRRFERA-HSKGVTCLSFSKDSSQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S D I ++ L++ K H+S VN F + GH I S S D K+
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATF-TQDGHYIISASSDGTVKI 375
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/172 (26%), Positives = 73/172 (42%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CMC-FSRDTEML--ATGAQDGKIKVWKIQSGQCLRRFERA-HSKGVTCLSFSKDSSQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S D I ++ L++ K H+S VN F + GH I S S D K+
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATF-TQDGHYIISASSDGTVKI 375
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/172 (26%), Positives = 73/172 (42%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CMC-FSRDTEML--ATGAQDGKIKVWKIQSGQCLRRFERA-HSKGVTCLSFSKDSSQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S D I ++ L++ K H+S VN F + GH I S S D K+
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATF-TQDGHYIISASSDGTVKI 375
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S A ++FS DG + I ++D G K++KD L++ ++ + D L
Sbjct: 214 SHAECARFSPDGQFLASSSVDGFIEVWDYISG-KLKKD-----LQYQADESFMMHDDPVL 267
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S ++ SG+ + + I G+ D +S G+ SL FS DG +L++
Sbjct: 268 CI-DFSRDSEML--ASGSQDGKIKIWRIRTGVCIRRFD--AHSQGVTSLSFSRDGSQLLS 322
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD 290
S D ++ L++ KL HTS VN F + +I + SD
Sbjct: 323 TSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSD 368
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
V +G+M++ A + +I G + G+S I SL F+T G ++ GS D + V++ +
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLT--GHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+ ++ H +++++ F + LI +GS D CK+
Sbjct: 250 TGRKVYTLIGHCAEISSAVFNWDCS-LILTGSMDKTCKL 287
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 109 (43.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 233 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD- 291
L+FS DG+ L + + D + ++DL A K+ H+ VN V F S +L+ SGS D
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEF-HPSEYLLASGSSDR 211
Query: 292 -----NLCKVNSVLLLTRSINPCNKYLFNP 316
+L K + V + P LFNP
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNP 241
Score = 63 (27.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVS---QFSADGSLFVAGFQASQ 147
G +GR + D C + VN P V T Q SA L VAG Q+
Sbjct: 29 GKSTGRLLATGGDDCRV--NVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + +L
Sbjct: 87 IRVWDLEAA-KILRTLL 102
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 36/164 (21%), Positives = 81/164 (49%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ--RHLVYASM 189
FS D + V+G + I +++ G K++KD L++ D + D R + ++
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNG-KLRKD-----LKYQAQDNLMMMDAAVRCISFSRD 275
Query: 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249
S ++ +G+++ V ++ G D D ++ G+ +++FS D +++G +D
Sbjct: 276 SEML-----ATGSIDGKIKVWKVETG-DCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDH 329
Query: 250 CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ V+ +++ K + H+S + V + DE H+I +D ++
Sbjct: 330 VVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSI 373
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
V +G+M++ A + +I +G + G+S I SL F+T G ++ GS D + V+D +
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLR--GHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+ ++ H +++++ F + LI +GS D CK+
Sbjct: 250 TGRKVNILIGHCAEISSASFNWDCS-LILTGSMDKTCKL 287
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 122 (48.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 55/190 (28%), Positives = 87/190 (45%)
Query: 117 PWPVDQT-TS--RAYVS-QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWT- 171
P+ QT TS RA S +FS+DG L + IR Y + I I +T
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINT---INDPIAEPVQEFTG 69
Query: 172 ----VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYS 227
++D + S D R +V AS + + DV +G++ T I G++
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIK----TLI------------GHT 113
Query: 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIY 286
F + F+ +V+GS D+ + ++D+ K L++L AH+ V V F + G LI
Sbjct: 114 NYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC-LKVLPAHSDPVTAVDF-NRDGSLIV 171
Query: 287 SGSDDNLCKV 296
S S D LC++
Sbjct: 172 SSSYDGLCRI 181
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 41/166 (24%), Positives = 77/166 (46%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191
F+ DGSL V+ RI+D G ++ L V+ SP+ + ++ ++
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKT--LIDDENPPVSFVRFSPNGKFILVGTLDN 220
Query: 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251
+ + ++ S L T H + + +F + T+G+ +V+GS D+C+
Sbjct: 221 TLRLWNISSAKF--LKTYTG-HVNAQYCISS----AFSV------TNGKRIVSGSEDNCV 267
Query: 252 YVYDLEANKLSLRILAHTSDV-NTVCFGDESGHLIYSGSDDNLCKV 296
++++L + KL ++ HT V N C E+ LI SGS D ++
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTEN--LIASGSLDKTVRI 311
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 128 (50.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 43/168 (25%), Positives = 79/168 (47%)
Query: 128 YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187
Y +S+DG V+G + +I+D+E+G +T+ + + P + +
Sbjct: 373 YSLDYSSDGRFIVSGSGDKKAKIWDIEKG----------KCAFTLGNEEVGP-KNGVTSV 421
Query: 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247
+MSP +V GS ++++ + + G + G+ ++S+ FS DG+ L +GS
Sbjct: 422 AMSPDGRLVAAGS--LDNIVRLWDAQTGYFLERYE--GHLDSVYSVAFSPDGKSLASGSL 477
Query: 248 DDCIYVYDLEANKLSLRILA----HTSDVNTVCFGDESGHLIYSGSDD 291
D + ++DL ++ R A H V +V F + LI SGS D
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLI-SGSKD 524
Score = 119 (46.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQK--DILAKSLRWTVTDTSLSPDQRHLVYASM 189
FS DG G S +IYDV+ G K+ D K + SPD +L +
Sbjct: 289 FSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAE 347
Query: 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249
V + D+ + ++ H F G+ I+SL +S+DGR +V+GS D
Sbjct: 348 DKTVKVWDIHTKKIQ--------HT---FY-----GHELDIYSLDYSSDGRFIVSGSGDK 391
Query: 250 CIYVYDLEANKLSLRI----LAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
++D+E K + + + + V +V + G L+ +GS DN+ ++
Sbjct: 392 KAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD-GRLVAAGSLDNIVRL 441
Score = 40 (19.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 35 QASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEV 72
+AS K + AL+HE++ K + + F ++
Sbjct: 7 RASELLDNLKGEIDALNHELSLYKHQKDDYERKFQNQL 44
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS 190
QFS ++G +I +Y VE G K ++ + A++ ++T++ + SPD +++ ++
Sbjct: 134 QFSPCNKYVISGLNDGKISMYSVETG-KAEQTLDAQNGKYTLS-IAYSPDGKYIASGAID 191
Query: 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250
I+ I DV +G ++ L+ G++ + SL FS + + L+ S D
Sbjct: 192 GIITIFDVAAG---------KVVQTLE-------GHAMPVRSLCFSPNSQLLLTASDDGH 235
Query: 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+ +YD+ + + + H S V V F ++ H S SD+++
Sbjct: 236 MKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSV 278
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S +QFS DG + G + +++ G K++KD L++ D + +Q L
Sbjct: 215 SHVECAQFSPDGQYLITGSVDGFLEVWNFTTG-KVRKD-----LKYQAQDQFMMMEQAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
+ S +V SG + V I G + ++ GI L+FS D ++++
Sbjct: 269 AL-NFSRDSEMV--ASGAQDGQIKVWRIITGQCLRKFEKA-HTKGITCLQFSRDNSQVLS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSV 299
S D + ++ L++ K+ H+S VN F + GH + S S D KV S+
Sbjct: 325 ASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPD-GHSVLSASSDGTVKVWSL 378
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 126 (49.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258
G+G ++S A V ++ G + G+ I+S+ FS +G + GS D+ V+DL
Sbjct: 366 GTGGLDSFARVWDLRTGRCVMFLE--GHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQ 423
Query: 259 NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
+ I AH + V++V F GH + +G+ DN K+
Sbjct: 424 RRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKI 461
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/148 (22%), Positives = 56/148 (37%)
Query: 47 LSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCH 106
+S D E+ + EP F E P +R + V + G + + A H
Sbjct: 86 VSTDDVEVKACLRALGEPITLFG-EGPAERRERLRNVLSVLGPDALKKSKKEDEKAKRTH 144
Query: 107 MLSRYLPV---NGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI 163
Y GP + + +R +++++S ++ +Q I + R K Q+
Sbjct: 145 --EEYQQTWYHEGPTSLKE--ARLWLAKYSLPRAVKRLDAARAQKEIPESTRTIKQQE-- 198
Query: 164 LAKSLRWTVTDTSLSPDQRHLVYASMSP 191
L K+LR S D R + Y SP
Sbjct: 199 LHKNLRNVNNFCSQIGDDRPISYCQFSP 226
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD------NLCKVNSVLLLTRSINPCNKYLFNP 316
+ SGS D +L K V + P LFNP
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD------NLCKVNSVLLLTRSINPCNKYLFNP 316
+ SGS D +L K V + P LFNP
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD------NLCKVNSVLLLTRSINPCNKYLFNP 316
+ SGS D +L K V + P LFNP
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD------NLCKVNSVLLLTRSINPCNKYLFNP 316
+ SGS D +L K V + P LFNP
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 82 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 140
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 141 FTTGSDDATCRL 152
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + L+FS DG+ L + + D + ++DL A K+ HT VN V F +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203
Query: 285 IYSGSDD------NLCKVNSVLLLTRSINPCNKYLFNP 316
+ SGS D +L K V + P LFNP
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNP 241
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQ 147
G SGR + D C + +N P + TS + + L VAG Q+
Sbjct: 29 GKASGRLLATGGDDCRV--NLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + ++
Sbjct: 87 IRVWDLEAA-KILRTLM 102
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191
F+ DGSL V+ +I+D + G ++ I KS V+ SP+ + ++ A++
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP--AVSFAKFSPNGKFILVATLDS 235
Query: 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251
+ + + +G V H F +F + T+G+ +V+GS D+C+
Sbjct: 236 TLKLSNYATG---KFLKVYTGHTNKVFCITS----AFSV------TNGKYIVSGSEDNCV 282
Query: 252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS 289
Y++DL+A + R+ HT V +V + SG+
Sbjct: 283 YLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGN 320
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 128 YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187
Y F DG V+G +RI+D+ + + L S+ VT ++SPD + +
Sbjct: 301 YSLDFFPDGDRLVSGSGDRSVRIWDL----RTSQCSLTLSIEDGVTTVAVSPDGKLIAAG 356
Query: 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247
S+ V + D +G + + LD + G+ ++S+ FS +G ++ +GS
Sbjct: 357 SLDRTVRVWDSTTGFLV---------ERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL 407
Query: 248 DDCIYVYDLE--ANKLS---LRILAHTSDVNTVCFGDESGHLIYSGSDD 291
D + ++ LE ++K S + + H V +VC ++ +++ SGS D
Sbjct: 408 DRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYIL-SGSKD 455
Score = 43 (20.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 24 SEFYDAADT-VNQASNSRSKFKKPLSALDHEIAQ 56
+E DA T + ASN S FKK D + Q
Sbjct: 13 TELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQ 46
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 128 YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187
Y F DG V+G +RI+D+ + + L S+ VT ++SPD + +
Sbjct: 301 YSLDFFPDGDRLVSGSGDRSVRIWDL----RTSQCSLTLSIEDGVTTVAVSPDGKLIAAG 356
Query: 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247
S+ V + D +G + + LD + G+ ++S+ FS +G ++ +GS
Sbjct: 357 SLDRTVRVWDSTTGFLV---------ERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL 407
Query: 248 DDCIYVYDLE--ANKLS---LRILAHTSDVNTVCFGDESGHLIYSGSDD 291
D + ++ LE ++K S + + H V +VC ++ +++ SGS D
Sbjct: 408 DRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYIL-SGSKD 455
Score = 43 (20.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 24 SEFYDAADT-VNQASNSRSKFKKPLSALDHEIAQ 56
+E DA T + ASN S FKK D + Q
Sbjct: 13 TELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQ 46
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCK 295
+GSDD C+
Sbjct: 241 FTTGSDDATCR 251
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 116 (45.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 157 WKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIH 213
W ++++ L S++ +VT SLS D +L+ SM V + D+ + +I
Sbjct: 210 WDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKE--RCVKIF 267
Query: 214 DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVN 273
G + + + +S DG ++ AGS+D +Y++D ++ ++ H VN
Sbjct: 268 QG------NVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVN 321
Query: 274 TVCFGDESGHLIYSGSDDNLCKVNSV 299
V F E ++ SGS D + +
Sbjct: 322 EVAFHPEEP-IVLSGSSDKRLYIGEI 346
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQK 161
++ DGSL + + ++D E G ++++
Sbjct: 107 YNTDGSLLFSASTDKTVCVWDSETGERVKR 136
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 178 SPDQRHLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS 236
SPD ++L+ SM + + D +G + +SLA + +D DF DD I + FS
Sbjct: 234 SPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAY--QSND--DFMMHDDA-----ILCIAFS 284
Query: 237 TDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCK 295
DG L GS D+ I V+ +++ K + AHT+ V + F S ++ SGS D+ K
Sbjct: 285 KDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQIL-SGSFDSSLK 343
Query: 296 VNSV 299
++ +
Sbjct: 344 IHGL 347
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 138 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 196
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 197 FTTGSDDATCRL 208
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 241 FTTGSDDATCRL 252
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 241 FTTGSDDATCRL 252
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 241 FTTGSDDATCRL 252
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 241 FTTGSDDATCRL 252
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+S + SL + DGR V+G+ D I ++D+ + + H SD+N V F +G+
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYA 240
Query: 285 IYSGSDDNLCKV 296
+GSDD C++
Sbjct: 241 FTTGSDDATCRL 252
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 235 FSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN 292
FS DGR L+ S D C+YV+ ++ +L R+ H V + CF + G LI S S D+
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPD-GRLIASSSSDH 90
>UNIPROTKB|Q9NSS8 [details] [associations]
symbol:DKFZp434D199 "Putative uncharacterized protein
DKFZp434D199" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471059
EMBL:AL451070 EMBL:AC114495 UniGene:Hs.33962 HGNC:HGNC:30857
ChiTaRS:SNRNP40 EMBL:AL157420 IPI:IPI00385642 PIR:T46935 SMR:Q9NSS8
STRING:Q9NSS8 Ensembl:ENST00000373720 Uniprot:Q9NSS8
Length = 127
Score = 96 (38.9 bits), Expect = 0.00034, P = 0.00034
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 235 FSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293
+S DG ++ AGS+D +YV+D + ++ ++ H +N V F + +I + SD L
Sbjct: 63 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 121
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 102 (41.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 233 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD- 291
L+FS DG+ L + + D + ++DL A K+ H VN V F +L+ SGS
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSM 212
Query: 292 -----NLCKVNSVLLLTRSINPCNKYLFNP 316
+L K + V + P LFNP
Sbjct: 213 TIRFWDLEKFHVVSCIEEEATPVRCILFNP 242
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 91 GNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVS---QFSADGSLFVAGFQASQ 147
G +GR + D C + VN P V T Q SA L VAG Q+
Sbjct: 29 GKSTGRLLATGGDDCRV--NVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGS 86
Query: 148 IRIYDVERGWKIQKDIL 164
IR++D+E KI + +L
Sbjct: 87 IRVWDLEAA-KILRTLL 102
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184
S ++FS DG V G I +++ G KI+KD L++ D + D L
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKD-----LKYQAQDNFMMMDDAVL 268
Query: 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244
S S ++ +G + V +I G + +S G+ L FS D ++++
Sbjct: 269 CM-SFSRDTEML--ATGAQDGKIKVWKIQSGQCLRRYERA-HSKGVTCLSFSKDSTQILS 324
Query: 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
S D I ++ L++ K H+S VN + H I S S D KV
Sbjct: 325 ASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAI-SASSDGTVKV 375
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 36/108 (33%), Positives = 54/108 (50%)
Query: 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251
I IVD T++S ++ D G+S I ++ FS DGR L +GS+D I
Sbjct: 7 ITDIVDC-INTLQSTLQRPKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTI 65
Query: 252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV-NS 298
++D + L + H+S V +V F +G L+ SGS D K+ NS
Sbjct: 66 KLWDPASGGLKQTLEGHSSSVQSVAFSP-NGQLLASGSSDTTIKLWNS 112
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186
+Y + + ++G +IR +D RG + I ++ VT SLS DQ HL+
Sbjct: 464 SYCNDVVCGDHIIISGHNDQKIRFWD-SRGPHCTQVI---PVQGRVTSLSLSHDQLHLLS 519
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
S + ++D+ ++N+ ++ F D ++ +FS D +AGS
Sbjct: 520 CSRDNTLKVIDL------RVSNIRQVFRADGFKCGSD--WTKAVFS----PDRSYALAGS 567
Query: 247 SDDCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGHLI 285
D +Y++D++ KL R+ H + VN V + H++
Sbjct: 568 CDGALYIWDVDTGKLESRLQGPHCAAVNAVAWCYSGSHMV 607
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 102 (41.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 233 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD- 291
L+FS DG+ L + + D + ++DL A K+ H VN V F +L+ SGS
Sbjct: 152 LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSM 211
Query: 292 -----NLCKVNSVLLLTRSINPCNKYLFNP 316
+L K + V + P LFNP
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNP 241
Score = 62 (26.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL 164
Q SA L VAG Q+ IR++D+E KI + +L
Sbjct: 69 QISAKEELIVAGSQSGSIRVWDLEAA-KILRTLL 101
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 109 (43.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G++ + L FS DG+ L + S D + ++DL A K+ +HTS VN V F +L
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE-YL 203
Query: 285 IYSGSDDNLCKV 296
+ SGS D K+
Sbjct: 204 LASGSADRTVKL 215
Score = 54 (24.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRH 183
TS QF++ VAG + +R++D+E KI + ++ +++ P +
Sbjct: 63 TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA-KILRTLMGHKA--SISSLDFHPMGEY 119
Query: 184 LVYASMSPIVHIVDV 198
L S+ + + DV
Sbjct: 120 LASGSVDSNIKLWDV 134
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 101 (40.6 bits), Expect = 0.00058, P = 0.00058
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284
G+ + SL FS +G+ L + D + ++DL + L + HT + ++ F +SG L
Sbjct: 20 GHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG-L 78
Query: 285 IYSGSDDNLCKV 296
I S S DN +V
Sbjct: 79 IASASMDNSVRV 90
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 43/169 (25%), Positives = 76/169 (44%)
Query: 131 QFSADGSLFVAGFQASQIRIYDVERGWKI---QKDILAKSLRWTVTDTSLSPDQRHLVYA 187
+FSADG G S +I+DV G K+ Q D + + SPD ++L
Sbjct: 306 RFSADGKYVATGCNRSA-QIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLATG 364
Query: 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247
+ + + D+ + T+ + F+ G+ I+SL F+ DGR + +GS
Sbjct: 365 AEDKQIRVWDITTRTIR-----------IQFA-----GHEQDIYSLDFARDGRTIASGSG 408
Query: 248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
D + ++D+E N +L + V TV ++ + + +GS D +V
Sbjct: 409 DRTVRLWDIE-NGTALTVFTIEDGVTTVAISPDTKY-VAAGSLDKSVRV 455
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 108 LSRYLPVNGPW-PVDQTT---SRA-YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD 162
L R P+ W P+ QT S A + FS DG +G + I+++D G +QK
Sbjct: 599 LGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTG-SLQKT 657
Query: 163 ILAK--SLRWTVTDTSLS-----PDQRHLVYASMSPIVHIVDVGSGTMESLAN---VTEI 212
+ R+ + + PD + ++ V + D +G + +A+ ++++
Sbjct: 658 LSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKV 717
Query: 213 HDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDD--CIYVYDLEANKLSLRILAHT 269
+ + GGY G+ + FS D +++ A G S D CI ++D L + H+
Sbjct: 718 NYTY-LQPPEQGGY--GLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHS 774
Query: 270 SDVNTVCFGDESGHLIYSGSDDNLCKV 296
+ +T+ F +S L+ +GS D C V
Sbjct: 775 HECSTMAFSSDSRQLV-TGSVD--CTV 798
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 165
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 166 LVCTGSDDGTVKL 178
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 166
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 167 LVCTGSDDGTVKL 179
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 166
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 167 LVCTGSDDGTVKL 179
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 166
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 167 LVCTGSDDGTVKL 179
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 166
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 167 LVCTGSDDGTVKL 179
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 166
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 167 LVCTGSDDGTVKL 179
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 192
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 193 LVCTGSDDGTVKL 205
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 96 (38.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 226 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285
+S G+ L F G LV SSD + + DL +L + HT V TV F + G L
Sbjct: 227 HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKD-GELF 285
Query: 286 YSGSDD 291
SG D
Sbjct: 286 TSGGAD 291
Score = 62 (26.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191
FSADG V + I+++ + R + L + W V SPD R +V S
Sbjct: 110 FSADGQFLVTASEDKSIKVWSMYRQRFLYS--LYRHTHW-VRCAKFSPDGRLIVSCSEDK 166
Query: 192 IVHIVDVGSGT-MESLANVTEIHDGLDFS 219
+ I D S + + ++ + +DFS
Sbjct: 167 TIKIWDTTSKQCVNNFSDSVGFANFVDFS 195
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 112 (44.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259
SG+ + V E+ G G+S +F F+ +V+GS D+ + ++D+
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 188
Query: 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
K + AH+ V+ V F + G LI S S D LC++
Sbjct: 189 KCLKTLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRI 224
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 21/63 (33%), Positives = 25/63 (39%)
Query: 34 NQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNY 93
+ ASN S KP L +A TK S K FS P L S+ L G Y
Sbjct: 48 SSASNKSSLSVKPNYTLKFTLAGHTKAVSAVK--FS---PNGEWLASSSADKLIKIWGAY 102
Query: 94 SGR 96
G+
Sbjct: 103 DGK 105
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 113 (44.8 bits), Expect = 0.00090, P = 0.00090
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 198 VGSGTMESLANVTEIH-DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL 256
+ SG+ + + +H D +F G+ I L +++DG ++V+ S D + +D+
Sbjct: 68 IASGSHDREIFLWRVHGDCKNFMVLK--GHKNAILDLHWTSDGSQIVSASPDKTVRAWDV 125
Query: 257 EANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 296
E K ++ H+S VN+ C LI SGSDD K+
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG-H 283
G+S + L ++TDG L + S+D + V+D E + R+ HTS VN+ C+ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQ 165
Query: 284 LIYSGSDDNLCKV 296
L+ +GSDD K+
Sbjct: 166 LVCTGSDDGTVKL 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 372 358 0.00081 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 86
No. of states in DFA: 610 (65 KB)
Total size of DFA: 237 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.87u 0.10s 28.97t Elapsed: 00:00:01
Total cpu time: 28.88u 0.10s 28.98t Elapsed: 00:00:01
Start: Sat May 11 11:10:10 2013 End: Sat May 11 11:10:11 2013