Query 017421
Match_columns 372
No_of_seqs 455 out of 3540
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 14:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2E-36 6.9E-41 280.1 32.2 246 83-354 101-380 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 1.2E-35 4E-40 268.2 32.1 256 75-354 40-312 (340)
3 3ow8_A WD repeat-containing pr 100.0 2.1E-35 7.3E-40 264.3 29.8 229 100-354 54-290 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 2.4E-35 8.3E-40 261.9 29.8 237 93-353 21-269 (304)
5 4gqb_B Methylosome protein 50; 100.0 3.4E-35 1.2E-39 265.3 30.5 223 100-346 99-334 (344)
6 2ynn_A Coatomer subunit beta'; 100.0 5.8E-35 2E-39 259.5 30.0 213 117-354 6-228 (304)
7 2pbi_B Guanine nucleotide-bind 100.0 1.8E-34 6.2E-39 261.8 31.7 257 75-354 49-326 (354)
8 3ow8_A WD repeat-containing pr 100.0 1.4E-34 4.7E-39 259.0 27.0 217 100-342 98-320 (321)
9 1vyh_C Platelet-activating fac 100.0 4E-34 1.4E-38 264.7 30.5 212 117-354 101-338 (410)
10 4ery_A WD repeat-containing pr 100.0 2.7E-33 9.1E-38 249.4 31.4 211 118-354 17-234 (312)
11 4gqb_B Methylosome protein 50; 100.0 5.5E-34 1.9E-38 257.3 27.2 208 122-353 80-298 (344)
12 4g56_B MGC81050 protein; prote 100.0 7.3E-34 2.5E-38 258.1 27.6 227 100-349 111-349 (357)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-33 5.7E-38 254.6 28.6 203 119-342 10-224 (345)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 4E-33 1.4E-37 252.1 30.9 192 93-299 24-223 (345)
15 1erj_A Transcriptional repress 100.0 4.1E-33 1.4E-37 256.5 31.3 235 93-354 72-352 (393)
16 1got_B GT-beta; complex (GTP-b 100.0 1.3E-32 4.5E-37 248.2 30.5 211 117-351 48-265 (340)
17 3frx_A Guanine nucleotide-bind 100.0 2.8E-32 9.4E-37 243.9 31.8 212 119-353 12-237 (319)
18 3iz6_a 40S ribosomal protein R 100.0 6.6E-33 2.2E-37 254.0 26.5 244 80-346 56-378 (380)
19 2pm7_B Protein transport prote 100.0 3.3E-32 1.1E-36 240.9 29.9 222 100-343 27-285 (297)
20 1nr0_A Actin interacting prote 100.0 1.6E-32 5.5E-37 266.7 30.4 235 92-352 25-279 (611)
21 3frx_A Guanine nucleotide-bind 100.0 8.7E-32 3E-36 240.6 32.2 224 100-351 36-275 (319)
22 2pbi_B Guanine nucleotide-bind 100.0 4.8E-32 1.6E-36 245.9 29.6 216 117-351 57-279 (354)
23 3iz6_a 40S ribosomal protein R 100.0 5.1E-33 1.7E-37 254.7 22.2 216 118-352 60-289 (380)
24 4ery_A WD repeat-containing pr 100.0 2.7E-31 9.2E-36 236.4 32.6 246 83-354 16-279 (312)
25 2xzm_R RACK1; ribosome, transl 100.0 3.7E-31 1.3E-35 238.9 32.1 222 100-347 45-289 (343)
26 2hes_X YDR267CP; beta-propelle 100.0 2.7E-31 9.1E-36 238.6 29.6 208 118-344 8-231 (330)
27 2pm7_B Protein transport prote 100.0 2.2E-31 7.4E-36 235.6 27.8 204 119-344 4-239 (297)
28 1erj_A Transcriptional repress 100.0 2.5E-31 8.7E-36 244.5 29.2 233 92-344 130-390 (393)
29 2hes_X YDR267CP; beta-propelle 100.0 4.4E-31 1.5E-35 237.2 30.0 225 100-345 30-282 (330)
30 2xzm_R RACK1; ribosome, transl 100.0 5.6E-31 1.9E-35 237.8 29.9 201 118-342 15-243 (343)
31 4e54_B DNA damage-binding prot 100.0 4.4E-32 1.5E-36 253.0 22.0 214 119-354 114-338 (435)
32 1nr0_A Actin interacting prote 100.0 2.2E-31 7.5E-36 258.7 27.8 231 92-350 66-362 (611)
33 3dm0_A Maltose-binding peripla 100.0 9.2E-31 3.1E-35 258.1 31.9 230 100-353 401-642 (694)
34 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-30 9.9E-35 231.8 30.9 242 100-351 29-345 (351)
35 4g56_B MGC81050 protein; prote 100.0 3E-31 1E-35 240.8 24.2 213 121-353 39-268 (357)
36 3bg1_A Protein SEC13 homolog; 100.0 2.4E-31 8.3E-36 237.4 22.6 223 100-343 31-293 (316)
37 4h5i_A Guanine nucleotide-exch 100.0 3.5E-30 1.2E-34 234.5 29.8 218 101-344 101-344 (365)
38 2ymu_A WD-40 repeat protein; u 100.0 1.6E-30 5.4E-35 250.7 29.0 211 100-340 362-577 (577)
39 1gxr_A ESG1, transducin-like e 100.0 3.1E-29 1.1E-33 224.6 34.4 226 100-350 68-303 (337)
40 3jrp_A Fusion protein of prote 100.0 5.5E-30 1.9E-34 233.3 29.7 224 100-345 29-289 (379)
41 2aq5_A Coronin-1A; WD40 repeat 100.0 4.4E-30 1.5E-34 236.9 29.3 233 101-353 54-310 (402)
42 3dwl_C Actin-related protein 2 100.0 5.5E-32 1.9E-36 247.1 16.1 212 120-353 7-250 (377)
43 3ei3_B DNA damage-binding prot 100.0 4.7E-30 1.6E-34 234.9 28.2 213 119-354 68-293 (383)
44 2ymu_A WD-40 repeat protein; u 100.0 1.2E-29 4.2E-34 244.5 32.3 241 100-354 280-549 (577)
45 3zwl_B Eukaryotic translation 100.0 2E-29 6.9E-34 228.5 31.6 233 117-353 25-314 (369)
46 3vl1_A 26S proteasome regulato 100.0 3.4E-30 1.2E-34 238.5 26.9 226 100-352 74-332 (420)
47 3dwl_C Actin-related protein 2 100.0 8.3E-31 2.8E-35 239.3 21.6 222 100-342 29-280 (377)
48 1r5m_A SIR4-interacting protei 100.0 1.4E-29 4.7E-34 234.0 30.0 234 100-345 64-363 (425)
49 3bg1_A Protein SEC13 homolog; 100.0 5E-31 1.7E-35 235.4 19.2 203 119-343 8-247 (316)
50 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-29 4.4E-34 230.5 28.8 223 100-343 26-274 (372)
51 4aow_A Guanine nucleotide-bind 100.0 5.4E-29 1.8E-33 223.6 32.5 227 119-353 33-296 (340)
52 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-29 3.8E-34 230.9 27.1 211 119-353 3-243 (372)
53 4aow_A Guanine nucleotide-bind 100.0 1.1E-28 3.7E-33 221.6 32.9 251 83-345 31-339 (340)
54 1gxr_A ESG1, transducin-like e 100.0 1.3E-29 4.5E-34 227.0 26.8 209 117-347 44-259 (337)
55 3dm0_A Maltose-binding peripla 100.0 1.4E-29 4.6E-34 249.8 28.9 212 119-353 377-602 (694)
56 3k26_A Polycomb protein EED; W 100.0 3.1E-30 1.1E-34 233.8 22.0 230 100-343 91-366 (366)
57 3jrp_A Fusion protein of prote 100.0 1.6E-29 5.3E-34 230.3 26.6 208 117-345 4-242 (379)
58 2j04_B YDR362CP, TAU91; beta p 100.0 2.9E-30 9.9E-35 244.8 21.7 221 100-343 179-428 (524)
59 4a11_B DNA excision repair pro 100.0 1.2E-29 4E-34 233.5 24.6 218 98-333 17-273 (408)
60 2pm9_A Protein WEB1, protein t 100.0 2.7E-29 9.2E-34 232.0 27.2 237 101-354 42-305 (416)
61 4e54_B DNA damage-binding prot 100.0 5.2E-30 1.8E-34 239.0 22.5 182 100-300 138-326 (435)
62 1sq9_A Antiviral protein SKI8; 100.0 1E-29 3.4E-34 233.5 24.0 237 100-351 32-330 (397)
63 3gre_A Serine/threonine-protei 100.0 1.5E-29 5.2E-34 235.7 23.4 224 118-353 56-302 (437)
64 3i2n_A WD repeat-containing pr 100.0 2.6E-29 8.9E-34 227.1 23.9 223 100-346 86-356 (357)
65 1sq9_A Antiviral protein SKI8; 100.0 3.5E-29 1.2E-33 229.9 24.9 225 100-345 87-397 (397)
66 4aez_A CDC20, WD repeat-contai 100.0 1.9E-28 6.4E-33 226.0 29.3 229 100-353 109-348 (401)
67 3mkq_A Coatomer beta'-subunit; 100.0 4.8E-29 1.6E-33 249.9 27.2 235 93-353 21-269 (814)
68 3ei3_B DNA damage-binding prot 100.0 8.4E-29 2.9E-33 226.6 26.6 233 100-353 92-349 (383)
69 3vl1_A 26S proteasome regulato 100.0 8.8E-29 3E-33 229.0 27.0 234 100-344 115-366 (420)
70 3zwl_B Eukaryotic translation 100.0 5.4E-28 1.8E-32 219.1 31.6 254 84-349 26-352 (369)
71 3mmy_A MRNA export factor; mRN 100.0 1.2E-28 4.2E-33 223.3 27.0 217 111-353 26-314 (368)
72 4ggc_A P55CDC, cell division c 100.0 5.3E-28 1.8E-32 215.0 30.4 226 100-345 41-317 (318)
73 2pm9_A Protein WEB1, protein t 100.0 1.7E-29 5.7E-34 233.4 20.9 232 100-347 85-341 (416)
74 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-28 5.5E-33 220.4 26.4 213 118-344 5-250 (351)
75 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-28 4.4E-33 246.8 28.6 212 117-353 6-227 (814)
76 4gga_A P55CDC, cell division c 100.0 3.9E-28 1.3E-32 225.2 29.3 234 100-353 121-405 (420)
77 3dw8_B Serine/threonine-protei 100.0 1.2E-28 4.1E-33 229.9 26.0 230 100-347 46-377 (447)
78 2xyi_A Probable histone-bindin 100.0 3E-28 1E-32 226.7 28.3 225 100-344 147-411 (430)
79 1r5m_A SIR4-interacting protei 100.0 6.6E-28 2.2E-32 222.8 30.0 218 100-342 126-424 (425)
80 4aez_A CDC20, WD repeat-contai 100.0 2.9E-28 1E-32 224.6 27.2 226 100-353 152-390 (401)
81 3jro_A Fusion protein of prote 100.0 1.8E-28 6.2E-33 243.6 26.7 223 100-344 27-286 (753)
82 3dw8_B Serine/threonine-protei 100.0 1.2E-28 4.2E-33 229.8 23.8 225 121-354 25-327 (447)
83 3gre_A Serine/threonine-protei 100.0 2.6E-28 9.1E-33 227.3 25.6 233 100-353 82-369 (437)
84 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-27 3.7E-32 250.6 32.0 212 117-354 608-882 (1249)
85 4a11_B DNA excision repair pro 100.0 2.8E-27 9.6E-32 217.5 31.0 227 100-353 62-375 (408)
86 3v7d_B Cell division control p 100.0 1.5E-27 5.1E-32 223.9 29.4 236 100-350 138-388 (464)
87 1pgu_A Actin interacting prote 100.0 1.3E-27 4.6E-32 231.6 29.5 234 93-353 26-293 (615)
88 1yfq_A Cell cycle arrest prote 100.0 5.6E-28 1.9E-32 217.2 24.5 223 100-353 29-292 (342)
89 2j04_B YDR362CP, TAU91; beta p 100.0 9E-29 3.1E-33 234.6 20.0 219 100-344 231-518 (524)
90 2oaj_A Protein SNI1; WD40 repe 100.0 3.7E-28 1.3E-32 245.1 25.3 199 121-348 14-247 (902)
91 3k26_A Polycomb protein EED; W 100.0 1.5E-27 5E-32 216.2 26.9 202 120-346 14-263 (366)
92 3i2n_A WD repeat-containing pr 100.0 1.1E-27 3.9E-32 216.3 26.1 219 103-344 43-292 (357)
93 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-27 6.3E-32 210.9 26.6 224 100-354 35-266 (313)
94 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-27 8E-32 222.0 28.3 212 121-353 99-354 (450)
95 3odt_A Protein DOA1; ubiquitin 100.0 4.6E-27 1.6E-31 208.4 28.3 210 117-354 11-225 (313)
96 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-27 8.5E-32 247.9 30.4 213 93-325 623-901 (1249)
97 3jro_A Fusion protein of prote 100.0 1.3E-27 4.4E-32 237.5 25.5 207 118-345 3-240 (753)
98 3v7d_B Cell division control p 100.0 3.8E-27 1.3E-31 221.1 27.4 222 100-349 179-427 (464)
99 1yfq_A Cell cycle arrest prote 100.0 7.3E-28 2.5E-32 216.5 19.8 206 120-353 7-241 (342)
100 3lrv_A PRE-mRNA-splicing facto 100.0 1.8E-27 6.2E-32 214.7 22.3 216 100-345 54-294 (343)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 4.4E-27 1.5E-31 216.8 24.8 222 100-346 100-345 (402)
102 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-26 5.3E-31 215.4 28.7 222 100-354 149-385 (435)
103 2xyi_A Probable histone-bindin 100.0 2.3E-27 8E-32 220.7 22.7 208 119-343 123-353 (430)
104 4gq1_A NUP37; propeller, trans 100.0 1.5E-27 5E-32 219.4 20.9 228 100-330 107-383 (393)
105 3mmy_A MRNA export factor; mRN 100.0 1E-26 3.5E-31 210.6 25.9 238 100-345 60-351 (368)
106 4h5i_A Guanine nucleotide-exch 100.0 4.8E-27 1.6E-31 213.8 23.1 193 92-300 140-342 (365)
107 2j04_A TAU60, YPL007P, hypothe 100.0 7.1E-27 2.4E-31 217.7 24.0 199 106-325 66-286 (588)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-26 7E-31 215.6 24.9 206 125-353 5-281 (450)
109 2w18_A PALB2, fancn, partner a 100.0 1.6E-26 5.3E-31 202.9 22.3 192 125-341 112-355 (356)
110 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-26 1.2E-30 207.3 25.0 221 119-352 14-345 (355)
111 1p22_A F-BOX/WD-repeat protein 99.9 6.1E-26 2.1E-30 211.4 25.2 218 100-350 189-421 (435)
112 1pgu_A Actin interacting prote 99.9 3.2E-26 1.1E-30 221.9 23.9 202 122-350 16-245 (615)
113 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.6E-25 1.2E-29 206.7 28.8 217 100-352 135-357 (445)
114 2j04_A TAU60, YPL007P, hypothe 99.9 3E-26 1E-30 213.5 21.0 220 93-353 23-264 (588)
115 4ggc_A P55CDC, cell division c 99.9 4E-25 1.4E-29 196.4 27.0 221 127-354 28-284 (318)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.9E-25 1.3E-29 206.5 27.6 204 116-354 110-319 (445)
117 4gq1_A NUP37; propeller, trans 99.9 3.3E-26 1.1E-30 210.4 17.7 210 122-353 87-358 (393)
118 2oaj_A Protein SNI1; WD40 repe 99.9 5.1E-25 1.7E-29 222.2 28.0 221 122-355 340-676 (902)
119 3lrv_A PRE-mRNA-splicing facto 99.9 3.6E-25 1.2E-29 199.6 23.4 195 122-341 123-331 (343)
120 4gga_A P55CDC, cell division c 99.9 2.7E-24 9.2E-29 199.4 29.7 204 126-355 107-322 (420)
121 2w18_A PALB2, fancn, partner a 99.9 3.6E-25 1.2E-29 194.3 20.1 183 103-299 156-355 (356)
122 1l0q_A Surface layer protein; 99.9 1.3E-23 4.3E-28 192.6 30.0 226 101-353 9-243 (391)
123 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.6E-23 1.2E-27 191.4 29.5 229 104-364 159-413 (415)
124 1l0q_A Surface layer protein; 99.9 5.5E-23 1.9E-27 188.3 30.1 223 102-353 52-285 (391)
125 3bws_A Protein LP49; two-domai 99.9 3E-23 1E-27 192.7 27.9 229 103-353 143-400 (433)
126 3bws_A Protein LP49; two-domai 99.9 5.2E-22 1.8E-26 184.3 29.7 214 101-342 188-431 (433)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 4.9E-22 1.7E-26 184.6 19.3 208 124-344 36-279 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.7E-21 9.4E-26 178.8 20.9 216 105-346 94-347 (415)
129 2ojh_A Uncharacterized protein 99.9 2.7E-20 9.4E-25 162.8 25.5 221 102-346 20-261 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 2E-20 6.9E-25 173.8 20.3 163 122-302 90-279 (434)
131 3vu4_A KMHSV2; beta-propeller 99.9 6.2E-20 2.1E-24 166.1 22.2 186 98-303 113-338 (355)
132 2ecf_A Dipeptidyl peptidase IV 99.8 2.2E-19 7.5E-24 178.1 25.5 207 124-353 36-331 (741)
133 1nir_A Nitrite reductase; hemo 99.8 2.9E-19 9.9E-24 170.5 23.5 240 93-353 186-524 (543)
134 1ri6_A Putative isomerase YBHE 99.8 1.1E-18 3.9E-23 156.2 25.5 219 102-342 13-261 (343)
135 1pby_B Quinohemoprotein amine 99.8 7.6E-19 2.6E-23 156.9 24.3 200 126-353 35-320 (337)
136 3u4y_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 154.5 26.4 218 102-346 18-255 (331)
137 1xfd_A DIP, dipeptidyl aminope 99.8 2.2E-19 7.5E-24 177.6 21.9 219 101-324 34-323 (723)
138 1nir_A Nitrite reductase; hemo 99.8 7.2E-19 2.5E-23 167.7 24.5 196 131-352 144-364 (543)
139 1xfd_A DIP, dipeptidyl aminope 99.8 9.7E-20 3.3E-24 180.1 16.4 204 126-351 18-297 (723)
140 3hfq_A Uncharacterized protein 99.8 5.8E-18 2E-22 152.4 26.6 225 104-347 63-323 (347)
141 3vgz_A Uncharacterized protein 99.8 1.4E-17 4.9E-22 149.8 27.1 207 124-352 88-312 (353)
142 2ojh_A Uncharacterized protein 99.8 9.1E-19 3.1E-23 153.1 18.6 210 93-325 49-290 (297)
143 1jmx_B Amine dehydrogenase; ox 99.8 4.6E-18 1.6E-22 152.7 23.3 225 103-353 20-335 (349)
144 3vgz_A Uncharacterized protein 99.8 2E-17 6.9E-22 148.8 27.2 212 124-352 40-271 (353)
145 1ri6_A Putative isomerase YBHE 99.8 1.8E-17 6.3E-22 148.2 26.4 218 104-342 60-307 (343)
146 3u4y_A Uncharacterized protein 99.8 7.3E-18 2.5E-22 150.5 23.0 221 103-346 61-307 (331)
147 3hfq_A Uncharacterized protein 99.8 3.2E-17 1.1E-21 147.5 26.8 227 103-342 15-270 (347)
148 2ecf_A Dipeptidyl peptidase IV 99.8 5.7E-18 2E-22 167.9 23.8 228 91-343 114-413 (741)
149 2z3z_A Dipeptidyl aminopeptida 99.8 1.9E-17 6.5E-22 163.3 26.5 238 92-345 127-437 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.8 5.4E-18 1.9E-22 167.2 19.9 210 125-352 82-352 (706)
151 1k32_A Tricorn protease; prote 99.8 2.5E-17 8.6E-22 169.3 22.6 223 104-351 224-468 (1045)
152 1k32_A Tricorn protease; prote 99.8 2.1E-17 7.2E-22 169.9 21.8 178 124-325 295-490 (1045)
153 3scy_A Hypothetical bacterial 99.8 1.9E-15 6.4E-20 136.7 31.5 231 102-342 25-290 (361)
154 1z68_A Fibroblast activation p 99.8 1.4E-17 4.6E-22 164.7 17.4 194 129-347 20-295 (719)
155 1z68_A Fibroblast activation p 99.8 6.9E-18 2.4E-22 166.8 15.0 209 102-323 34-328 (719)
156 3o4h_A Acylamino-acid-releasin 99.7 9.1E-17 3.1E-21 155.0 20.0 194 124-352 21-235 (582)
157 3scy_A Hypothetical bacterial 99.7 1.6E-15 5.4E-20 137.2 26.6 224 104-347 75-343 (361)
158 3o4h_A Acylamino-acid-releasin 99.7 1.1E-16 3.7E-21 154.5 16.6 210 103-347 43-278 (582)
159 1jmx_B Amine dehydrogenase; ox 99.7 8.3E-16 2.8E-20 137.9 21.3 156 129-301 4-175 (349)
160 1jof_A Carboxy-CIS,CIS-muconat 99.7 3E-15 1E-19 135.8 25.1 203 124-346 39-295 (365)
161 4a5s_A Dipeptidyl peptidase 4 99.7 5.6E-16 1.9E-20 153.7 21.3 232 103-345 35-355 (740)
162 1pby_B Quinohemoprotein amine 99.7 2.7E-15 9.4E-20 133.7 23.6 147 137-300 2-162 (337)
163 4a5s_A Dipeptidyl peptidase 4 99.7 4.2E-16 1.4E-20 154.6 20.1 194 126-345 18-296 (740)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 8.3E-16 2.8E-20 139.5 20.4 201 126-344 84-342 (365)
165 3pe7_A Oligogalacturonate lyas 99.7 2.4E-15 8.1E-20 137.2 23.4 208 117-346 23-276 (388)
166 3azo_A Aminopeptidase; POP fam 99.7 3.9E-15 1.3E-19 145.7 22.8 211 104-339 47-319 (662)
167 3azo_A Aminopeptidase; POP fam 99.6 1.5E-14 5.2E-19 141.5 21.3 188 115-322 115-350 (662)
168 1q7f_A NHL, brain tumor CG1071 99.6 3.5E-13 1.2E-17 117.6 26.9 206 121-352 26-246 (286)
169 1q7f_A NHL, brain tumor CG1071 99.6 1.7E-13 6E-18 119.5 24.6 196 123-345 75-282 (286)
170 3fvz_A Peptidyl-glycine alpha- 99.6 2.3E-13 8E-18 121.5 25.1 215 123-350 22-284 (329)
171 2xdw_A Prolyl endopeptidase; a 99.6 3.1E-13 1E-17 133.4 25.7 206 123-352 123-377 (710)
172 2oiz_A Aromatic amine dehydrog 99.6 2.2E-13 7.4E-18 123.3 22.7 234 104-350 31-343 (361)
173 3e5z_A Putative gluconolactona 99.6 4.2E-13 1.4E-17 117.8 23.9 195 118-333 21-243 (296)
174 3pe7_A Oligogalacturonate lyas 99.6 5E-14 1.7E-18 128.4 18.2 205 120-346 76-332 (388)
175 3e5z_A Putative gluconolactona 99.6 7.6E-13 2.6E-17 116.1 24.1 187 117-325 61-275 (296)
176 3fvz_A Peptidyl-glycine alpha- 99.6 4E-13 1.4E-17 120.0 22.3 207 122-343 88-322 (329)
177 3c5m_A Oligogalacturonate lyas 99.6 2.9E-14 1E-18 130.1 14.8 213 127-346 38-276 (396)
178 2dg1_A DRP35, lactonase; beta 99.6 2.4E-12 8.1E-17 114.8 25.5 206 119-350 39-269 (333)
179 1rwi_B Serine/threonine-protei 99.5 3.3E-12 1.1E-16 110.3 22.7 196 124-346 66-267 (270)
180 3dsm_A Uncharacterized protein 99.5 1.5E-11 5E-16 109.7 27.1 205 124-353 83-311 (328)
181 2gop_A Trilobed protease; beta 99.5 2.8E-12 9.5E-17 115.0 21.8 182 125-346 59-294 (347)
182 1xip_A Nucleoporin NUP159; bet 99.5 4.9E-13 1.7E-17 120.6 16.1 169 126-325 39-232 (388)
183 3no2_A Uncharacterized protein 99.5 4E-12 1.4E-16 110.4 20.8 187 135-351 4-203 (276)
184 3c5m_A Oligogalacturonate lyas 99.5 2.3E-13 7.8E-18 124.1 13.2 195 129-346 85-332 (396)
185 2bkl_A Prolyl endopeptidase; m 99.5 3.4E-12 1.2E-16 125.6 21.9 203 122-349 118-356 (695)
186 3no2_A Uncharacterized protein 99.5 1.6E-11 5.4E-16 106.6 23.6 204 103-325 14-231 (276)
187 1qks_A Cytochrome CD1 nitrite 99.5 3.3E-11 1.1E-15 114.9 26.2 193 134-352 165-382 (567)
188 2dg1_A DRP35, lactonase; beta 99.5 5.2E-11 1.8E-15 106.1 25.5 184 122-325 84-298 (333)
189 2gop_A Trilobed protease; beta 99.4 1.1E-11 3.7E-16 111.1 20.5 166 125-325 15-233 (347)
190 1rwi_B Serine/threonine-protei 99.4 2.3E-11 7.8E-16 104.9 21.2 192 126-344 25-223 (270)
191 2oiz_A Aromatic amine dehydrog 99.4 8.7E-11 3E-15 106.1 23.3 187 125-319 108-360 (361)
192 2xdw_A Prolyl endopeptidase; a 99.4 4E-11 1.4E-15 118.3 22.5 200 127-345 173-416 (710)
193 1yr2_A Prolyl oligopeptidase; 99.4 6E-11 2.1E-15 117.6 23.8 200 123-348 161-399 (741)
194 2bkl_A Prolyl endopeptidase; m 99.4 5E-11 1.7E-15 117.3 22.8 196 128-345 171-399 (695)
195 3dsm_A Uncharacterized protein 99.4 8.3E-11 2.8E-15 104.8 21.6 195 125-346 44-256 (328)
196 1xip_A Nucleoporin NUP159; bet 99.4 1.5E-11 5E-16 111.1 16.3 136 120-287 84-230 (388)
197 2z2n_A Virginiamycin B lyase; 99.3 2.4E-09 8.3E-14 93.3 27.7 181 123-324 13-200 (299)
198 2mad_H Methylamine dehydrogena 99.3 1.9E-09 6.4E-14 97.7 27.0 212 129-350 70-357 (373)
199 2z2n_A Virginiamycin B lyase; 99.3 2.9E-09 1E-13 92.8 27.5 190 123-333 55-252 (299)
200 3g4e_A Regucalcin; six bladed 99.3 2.1E-09 7.2E-14 94.2 26.3 184 122-325 51-260 (297)
201 3g4e_A Regucalcin; six bladed 99.3 1.6E-09 5.3E-14 95.1 25.2 202 124-352 12-238 (297)
202 1qks_A Cytochrome CD1 nitrite 99.3 2.1E-09 7.1E-14 102.5 27.2 239 92-352 203-547 (567)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.6E-09 5.3E-14 95.4 24.5 194 123-342 69-298 (314)
204 3hrp_A Uncharacterized protein 99.3 9.6E-10 3.3E-14 100.9 23.2 207 124-353 130-363 (409)
205 3dr2_A Exported gluconolactona 99.3 9E-10 3.1E-14 97.0 21.2 193 112-327 73-297 (305)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.1E-14 96.2 21.9 205 124-350 17-263 (314)
207 2ghs_A AGR_C_1268P; regucalcin 99.3 5.6E-09 1.9E-13 92.8 26.3 181 123-325 88-290 (326)
208 3iuj_A Prolyl endopeptidase; h 99.2 1.1E-09 3.8E-14 107.6 22.6 198 122-344 126-360 (693)
209 2qc5_A Streptogramin B lactona 99.2 1.5E-08 5.1E-13 88.3 27.4 180 124-324 19-205 (300)
210 3dr2_A Exported gluconolactona 99.2 2.3E-09 8E-14 94.3 22.3 188 116-324 36-256 (305)
211 2qc5_A Streptogramin B lactona 99.2 1.9E-08 6.5E-13 87.6 27.0 181 123-324 60-247 (300)
212 1yr2_A Prolyl oligopeptidase; 99.2 2.2E-09 7.5E-14 106.4 23.4 195 128-345 212-443 (741)
213 2ghs_A AGR_C_1268P; regucalcin 99.2 2.2E-08 7.4E-13 89.0 25.7 195 126-350 50-266 (326)
214 2qe8_A Uncharacterized protein 99.2 7.8E-09 2.7E-13 92.6 22.6 203 125-345 17-280 (343)
215 3hrp_A Uncharacterized protein 99.1 1.1E-08 3.7E-13 93.9 22.8 182 130-324 176-397 (409)
216 3c75_H MADH, methylamine dehyd 99.1 3.8E-09 1.3E-13 96.6 18.6 216 129-350 122-409 (426)
217 2hz6_A Endoplasmic reticulum t 99.1 5.3E-11 1.8E-15 107.9 3.8 186 135-351 8-200 (369)
218 2qe8_A Uncharacterized protein 99.0 2.3E-08 7.8E-13 89.5 20.0 203 122-325 64-309 (343)
219 3sjl_D Methylamine dehydrogena 99.0 7.3E-08 2.5E-12 86.6 21.8 152 131-300 39-207 (386)
220 3sjl_D Methylamine dehydrogena 99.0 1.5E-07 5E-12 84.7 23.4 204 129-352 82-329 (386)
221 2mad_H Methylamine dehydrogena 99.0 3.8E-07 1.3E-11 82.4 25.3 120 132-266 28-165 (373)
222 3iuj_A Prolyl endopeptidase; h 99.0 6.8E-08 2.3E-12 94.9 21.2 194 128-345 178-407 (693)
223 2ece_A 462AA long hypothetical 98.9 1.1E-07 3.8E-12 86.2 20.1 189 134-342 93-351 (462)
224 2ece_A 462AA long hypothetical 98.9 3.2E-07 1.1E-11 83.3 21.7 184 126-325 139-399 (462)
225 2iwa_A Glutamine cyclotransfer 98.9 5.8E-07 2E-11 76.5 21.6 176 126-325 22-224 (266)
226 1mda_H Methylamine dehydrogena 98.9 6.8E-08 2.3E-12 86.8 16.3 211 129-353 69-356 (368)
227 3c75_H MADH, methylamine dehyd 98.9 2.5E-06 8.7E-11 77.9 26.2 205 134-353 82-369 (426)
228 1fwx_A Nitrous oxide reductase 98.8 3.3E-07 1.1E-11 86.0 20.3 192 135-353 100-381 (595)
229 3nol_A Glutamine cyclotransfer 98.8 6.9E-07 2.4E-11 75.3 18.4 173 127-325 45-243 (262)
230 3qqz_A Putative uncharacterize 98.8 9.4E-06 3.2E-10 68.6 25.4 195 120-324 22-241 (255)
231 3nok_A Glutaminyl cyclase; bet 98.7 1.8E-06 6.2E-11 72.7 18.5 172 127-324 57-252 (268)
232 1npe_A Nidogen, entactin; glyc 98.7 2.9E-05 1E-09 66.4 26.3 199 125-351 36-246 (267)
233 1fwx_A Nitrous oxide reductase 98.7 5.7E-07 2E-11 84.4 16.3 179 124-325 133-406 (595)
234 1kb0_A Quinohemoprotein alcoho 98.7 1.2E-06 4E-11 85.6 18.8 203 136-352 174-516 (677)
235 1yiq_A Quinohemoprotein alcoho 98.7 1.4E-06 4.8E-11 85.2 19.2 195 145-353 182-515 (689)
236 2xe4_A Oligopeptidase B; hydro 98.7 4.3E-06 1.5E-10 82.7 22.8 156 126-300 175-353 (751)
237 3mbr_X Glutamine cyclotransfer 98.7 5.3E-06 1.8E-10 69.3 19.7 175 125-325 21-222 (243)
238 2hz6_A Endoplasmic reticulum t 98.6 3.8E-09 1.3E-13 95.6 0.5 186 106-319 21-216 (369)
239 1yiq_A Quinohemoprotein alcoho 98.6 2.7E-06 9.2E-11 83.2 20.4 191 129-323 239-534 (689)
240 2fp8_A Strictosidine synthase; 98.6 2.2E-05 7.5E-10 69.2 23.9 183 125-324 19-246 (322)
241 1kb0_A Quinohemoprotein alcoho 98.6 4E-06 1.4E-10 81.9 20.5 193 128-324 246-537 (677)
242 3hxj_A Pyrrolo-quinoline quino 98.5 1.2E-05 4E-10 70.9 17.9 161 136-324 107-272 (330)
243 1npe_A Nidogen, entactin; glyc 98.4 0.00011 3.8E-09 62.7 23.2 184 137-343 2-198 (267)
244 1mda_H Methylamine dehydrogena 98.4 2.1E-05 7.1E-10 70.6 18.7 98 147-258 47-158 (368)
245 2iwa_A Glutamine cyclotransfer 98.4 2.5E-05 8.6E-10 66.4 17.9 154 171-352 22-190 (266)
246 2p4o_A Hypothetical protein; p 98.4 0.00016 5.6E-09 63.1 22.7 186 125-333 32-239 (306)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00039 1.3E-08 62.4 25.3 144 136-301 53-207 (376)
248 3hxj_A Pyrrolo-quinoline quino 98.3 1.9E-05 6.5E-10 69.5 15.9 176 123-327 135-315 (330)
249 3nol_A Glutamine cyclotransfer 98.3 3.8E-05 1.3E-09 64.7 16.2 152 171-352 44-210 (262)
250 2fp8_A Strictosidine synthase; 98.2 0.00036 1.2E-08 61.3 22.1 155 125-300 80-268 (322)
251 2p4o_A Hypothetical protein; p 98.2 0.00081 2.8E-08 58.6 24.2 191 123-325 70-276 (306)
252 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00067 2.3E-08 60.9 24.2 187 135-350 102-303 (376)
253 3v65_B Low-density lipoprotein 98.2 0.00083 2.8E-08 60.8 24.7 201 123-350 114-325 (386)
254 1ijq_A LDL receptor, low-densi 98.2 0.0025 8.4E-08 55.9 27.2 200 124-350 29-245 (316)
255 3nok_A Glutaminyl cyclase; bet 98.2 0.00019 6.7E-09 60.4 18.6 152 171-352 56-219 (268)
256 3v64_C Agrin; beta propeller, 98.2 0.00096 3.3E-08 59.4 24.5 199 124-349 72-281 (349)
257 1kv9_A Type II quinohemoprotei 98.2 0.00025 8.5E-09 69.1 22.1 194 145-352 177-497 (668)
258 3mbr_X Glutamine cyclotransfer 98.2 0.00026 8.8E-09 59.1 18.9 154 169-352 20-188 (243)
259 2p9w_A MAL S 1 allergenic prot 98.2 0.00028 9.7E-09 61.4 19.3 170 124-300 12-214 (334)
260 3p5b_L Low density lipoprotein 98.1 0.0022 7.4E-08 58.3 25.9 205 121-350 108-327 (400)
261 3v64_C Agrin; beta propeller, 98.1 0.0022 7.4E-08 57.1 24.4 178 125-324 34-220 (349)
262 3m0c_C LDL receptor, low-densi 98.1 0.0032 1.1E-07 62.2 27.3 161 122-300 421-588 (791)
263 3tc9_A Hypothetical hydrolase; 98.1 0.00025 8.5E-09 65.2 18.1 155 125-300 137-300 (430)
264 1k3i_A Galactose oxidase precu 98.1 0.00029 1E-08 68.5 19.4 117 129-260 190-325 (656)
265 2xe4_A Oligopeptidase B; hydro 98.1 0.0011 3.6E-08 65.6 23.7 155 128-297 224-394 (751)
266 1ijq_A LDL receptor, low-densi 98.0 0.0031 1.1E-07 55.2 23.8 165 138-324 3-181 (316)
267 1flg_A Protein (quinoprotein e 98.0 0.00052 1.8E-08 65.6 20.0 191 129-324 250-546 (582)
268 2ad6_A Methanol dehydrogenase 98.0 0.00059 2E-08 65.1 19.7 192 129-325 239-525 (571)
269 3sov_A LRP-6, low-density lipo 98.0 0.0024 8.2E-08 56.0 22.0 200 125-350 35-245 (318)
270 3v65_B Low-density lipoprotein 98.0 0.0022 7.5E-08 58.0 22.4 175 128-324 80-263 (386)
271 2ad6_A Methanol dehydrogenase 98.0 0.00099 3.4E-08 63.6 20.8 202 137-352 161-503 (571)
272 4a2l_A BT_4663, two-component 98.0 0.0079 2.7E-07 59.8 28.1 191 124-333 356-568 (795)
273 1kv9_A Type II quinohemoprotei 97.9 0.00091 3.1E-08 65.1 20.2 169 129-302 234-489 (668)
274 4hw6_A Hypothetical protein, I 97.9 0.002 7E-08 59.1 21.5 154 125-300 139-303 (433)
275 4hw6_A Hypothetical protein, I 97.9 0.0026 9E-08 58.4 21.5 160 122-300 179-373 (433)
276 3amr_A 3-phytase; beta-propell 97.9 0.009 3.1E-07 52.5 23.2 192 135-351 39-272 (355)
277 1w6s_A Methanol dehydrogenase 97.8 0.0022 7.5E-08 61.4 20.4 190 129-323 245-532 (599)
278 4a2l_A BT_4663, two-component 97.8 0.017 6E-07 57.3 27.8 201 124-344 405-625 (795)
279 1w6s_A Methanol dehydrogenase 97.8 0.0033 1.1E-07 60.2 20.5 116 144-266 180-350 (599)
280 3p5b_L Low density lipoprotein 97.8 0.011 3.6E-07 53.7 23.1 166 137-324 84-263 (400)
281 3tc9_A Hypothetical hydrolase; 97.8 0.00067 2.3E-08 62.3 15.0 136 171-324 138-287 (430)
282 3v9f_A Two-component system se 97.7 0.014 4.8E-07 57.8 25.4 201 124-344 406-622 (781)
283 1flg_A Protein (quinoprotein e 97.7 0.0035 1.2E-07 59.8 20.2 87 174-267 250-364 (582)
284 2xbg_A YCF48-like protein; pho 97.7 0.0097 3.3E-07 52.3 21.4 183 124-331 121-317 (327)
285 3v9f_A Two-component system se 97.7 0.01 3.6E-07 58.8 23.8 190 124-333 362-565 (781)
286 3kya_A Putative phosphatase; s 97.7 0.0044 1.5E-07 57.5 18.9 159 125-300 139-340 (496)
287 3qqz_A Putative uncharacterize 97.6 0.022 7.4E-07 48.0 22.3 143 165-324 22-190 (255)
288 1k3i_A Galactose oxidase precu 97.6 0.0061 2.1E-07 59.2 20.4 197 126-325 244-529 (656)
289 1n7d_A LDL receptor, low-densi 97.6 0.00038 1.3E-08 68.1 11.6 202 124-350 405-621 (699)
290 3sre_A PON1, serum paraoxonase 97.6 0.019 6.5E-07 50.9 21.3 184 126-324 51-284 (355)
291 3sov_A LRP-6, low-density lipo 97.5 0.019 6.7E-07 50.2 19.8 168 138-324 6-183 (318)
292 2p9w_A MAL S 1 allergenic prot 97.4 0.02 6.7E-07 49.9 18.5 146 169-324 12-202 (334)
293 3s94_A LRP-6, low-density lipo 97.4 0.052 1.8E-06 52.2 22.8 198 124-347 39-247 (619)
294 3m0c_C LDL receptor, low-densi 97.3 0.054 1.8E-06 53.5 22.7 168 138-324 397-575 (791)
295 4a0p_A LRP6, LRP-6, low-densit 97.3 0.12 4E-06 49.8 24.4 195 125-348 37-242 (628)
296 2xbg_A YCF48-like protein; pho 97.3 0.08 2.8E-06 46.3 22.9 180 124-327 79-270 (327)
297 3kya_A Putative phosphatase; s 97.3 0.012 4.2E-07 54.5 16.5 140 171-324 140-327 (496)
298 3amr_A 3-phytase; beta-propell 97.1 0.046 1.6E-06 48.0 17.9 162 125-300 68-262 (355)
299 3pbp_A Nucleoporin NUP82; beta 97.1 0.019 6.6E-07 51.6 15.5 122 126-254 67-208 (452)
300 2ism_A Putative oxidoreductase 97.0 0.019 6.6E-07 51.0 14.5 156 124-290 30-222 (352)
301 3a9g_A Putative uncharacterize 97.0 0.035 1.2E-06 49.3 16.1 152 125-289 29-216 (354)
302 4a0p_A LRP6, LRP-6, low-densit 97.0 0.2 6.8E-06 48.2 22.4 169 137-324 7-183 (628)
303 3das_A Putative oxidoreductase 96.9 0.072 2.5E-06 47.0 17.6 153 124-288 31-219 (347)
304 3pbp_A Nucleoporin NUP82; beta 96.9 0.13 4.4E-06 46.3 19.1 160 133-297 29-208 (452)
305 1n7d_A LDL receptor, low-densi 96.8 0.0044 1.5E-07 60.6 9.9 160 145-324 385-557 (699)
306 1cru_A Protein (soluble quinop 96.8 0.16 5.3E-06 46.8 19.3 113 125-246 27-162 (454)
307 1tl2_A L10, protein (tachylect 96.7 0.056 1.9E-06 44.1 13.8 148 126-293 42-202 (236)
308 1tl2_A L10, protein (tachylect 96.6 0.23 8E-06 40.4 16.4 138 171-324 42-199 (236)
309 3sre_A PON1, serum paraoxonase 96.4 0.44 1.5E-05 42.1 23.0 146 125-291 112-287 (355)
310 2ism_A Putative oxidoreductase 96.4 0.22 7.5E-06 44.1 17.4 104 171-289 32-153 (352)
311 2vpj_A Kelch-like protein 12; 96.3 0.24 8.2E-06 42.4 16.3 147 135-301 62-231 (301)
312 2g8s_A Glucose/sorbosone dehyd 96.2 0.16 5.4E-06 45.0 14.9 153 125-287 18-214 (353)
313 3s94_A LRP-6, low-density lipo 96.1 1.1 3.7E-05 42.9 23.7 156 125-300 349-509 (619)
314 2be1_A Serine/threonine-protei 96.0 0.22 7.4E-06 43.7 14.8 117 137-267 11-139 (339)
315 3ii7_A Kelch-like protein 7; p 96.0 0.22 7.7E-06 42.8 15.1 146 135-301 55-225 (306)
316 2g8s_A Glucose/sorbosone dehyd 96.0 0.37 1.3E-05 42.6 16.6 141 171-323 19-214 (353)
317 1cru_A Protein (soluble quinop 95.9 0.59 2E-05 42.9 17.7 110 171-289 28-162 (454)
318 2xn4_A Kelch-like protein 2; s 95.9 0.3 1E-05 41.9 15.0 145 135-301 61-229 (302)
319 4asc_A Kelch repeat and BTB do 95.8 0.81 2.8E-05 39.4 21.5 150 130-301 40-221 (315)
320 3a9g_A Putative uncharacterize 95.7 1 3.5E-05 39.7 20.9 192 124-324 72-329 (354)
321 3das_A Putative oxidoreductase 95.7 1 3.5E-05 39.6 19.5 142 171-324 33-219 (347)
322 3ii7_A Kelch-like protein 7; p 95.5 0.92 3.1E-05 38.8 16.8 144 137-301 13-178 (306)
323 1zgk_A Kelch-like ECH-associat 95.5 0.61 2.1E-05 40.1 15.5 145 135-301 70-240 (308)
324 2vpj_A Kelch-like protein 12; 95.4 0.4 1.4E-05 41.0 14.0 145 135-300 112-277 (301)
325 3ei3_A DNA damage-binding prot 95.3 3.3 0.00011 42.8 22.5 122 181-321 844-984 (1158)
326 3s25_A Hypothetical 7-bladed b 95.2 0.81 2.8E-05 39.4 15.1 159 130-324 58-240 (302)
327 2xzh_A Clathrin heavy chain 1; 95.2 1.5 5E-05 38.2 23.9 203 130-351 72-298 (365)
328 2xn4_A Kelch-like protein 2; s 95.1 0.55 1.9E-05 40.1 14.1 146 135-301 108-276 (302)
329 2zwa_A Leucine carboxyl methyl 95.0 1.6 5.5E-05 42.5 18.4 153 135-301 451-635 (695)
330 4asc_A Kelch repeat and BTB do 94.7 1.8 6.3E-05 37.1 17.0 141 138-301 7-174 (315)
331 2zwa_A Leucine carboxyl methyl 94.7 1.6 5.3E-05 42.5 17.3 153 134-302 396-578 (695)
332 2woz_A Kelch repeat and BTB do 94.5 2.1 7.2E-05 36.8 19.2 150 131-301 52-231 (318)
333 2uvk_A YJHT; unknown function, 94.2 0.54 1.9E-05 41.3 12.0 54 135-190 65-128 (357)
334 1bpo_A Protein (clathrin); cla 94.2 3.1 0.00011 37.7 22.7 198 129-351 70-297 (494)
335 3s25_A Hypothetical 7-bladed b 94.2 1.1 3.6E-05 38.7 13.4 135 131-299 110-253 (302)
336 1zgk_A Kelch-like ECH-associat 93.9 0.89 3E-05 39.0 12.4 144 135-300 121-286 (308)
337 3sbq_A Nitrous-oxide reductase 93.3 0.79 2.7E-05 42.8 11.2 114 171-289 324-453 (638)
338 2xzh_A Clathrin heavy chain 1; 93.3 3.8 0.00013 35.6 21.0 167 124-300 151-331 (365)
339 1bpo_A Protein (clathrin); cla 92.1 6.7 0.00023 35.6 23.4 168 124-300 150-330 (494)
340 2wg3_C Hedgehog-interacting pr 91.3 3.6 0.00012 37.7 13.2 114 125-247 14-158 (463)
341 2woz_A Kelch repeat and BTB do 91.0 6.8 0.00023 33.5 20.0 141 138-301 18-184 (318)
342 3ei3_A DNA damage-binding prot 90.2 19 0.00065 37.3 28.6 184 123-324 552-754 (1158)
343 1xi4_A Clathrin heavy chain; a 89.9 8.9 0.0003 40.3 15.5 201 130-349 71-295 (1630)
344 2wg3_C Hedgehog-interacting pr 88.9 11 0.00039 34.4 14.5 114 171-290 15-158 (463)
345 1xi4_A Clathrin heavy chain; a 88.5 14 0.00049 38.8 15.8 167 124-299 150-329 (1630)
346 2uvk_A YJHT; unknown function, 86.8 15 0.00051 31.8 16.3 70 135-206 19-101 (357)
347 2be1_A Serine/threonine-protei 83.3 13 0.00045 32.3 11.3 61 240-300 11-75 (339)
348 4gq2_M Nucleoporin NUP120; bet 82.7 43 0.0015 33.8 20.4 73 228-300 236-316 (950)
349 3ott_A Two-component system se 82.7 37 0.0013 33.0 24.1 185 124-333 62-257 (758)
350 3sbq_A Nitrous-oxide reductase 81.7 5.2 0.00018 37.4 8.2 68 270-344 323-409 (638)
351 3f7f_A Nucleoporin NUP120; nuc 81.0 15 0.00051 35.5 11.4 38 228-267 222-259 (729)
352 4gq2_M Nucleoporin NUP120; bet 76.5 21 0.0007 36.1 11.6 39 124-162 235-273 (950)
353 4hvt_A Ritya.17583.B, post-pro 74.9 64 0.0022 31.3 17.8 35 126-160 130-170 (711)
354 3uc1_A DNA gyrase subunit A; D 73.5 44 0.0015 28.8 21.0 169 125-301 95-279 (327)
355 3b7f_A Glycosyl hydrolase, BNR 69.0 60 0.002 28.5 16.6 166 124-292 54-254 (394)
356 4fhn_B Nucleoporin NUP120; pro 68.8 16 0.00056 37.7 8.9 38 229-266 239-276 (1139)
357 3q6k_A 43.2 kDa salivary prote 68.4 63 0.0022 28.5 22.4 196 124-324 86-341 (381)
358 1wp5_A Topoisomerase IV; broke 68.0 58 0.002 28.0 16.5 156 134-300 3-173 (323)
359 3b7f_A Glycosyl hydrolase, BNR 66.7 66 0.0023 28.2 19.4 101 229-329 116-255 (394)
360 3ott_A Two-component system se 66.0 1E+02 0.0034 29.9 26.3 177 124-324 145-341 (758)
361 3zwu_A Alkaline phosphatase PH 62.0 32 0.0011 32.5 8.7 59 229-288 477-548 (592)
362 4fhn_B Nucleoporin NUP120; pro 58.9 32 0.0011 35.5 8.9 38 172-209 240-277 (1139)
363 4a9v_A PHOX; hydrolase, beta-p 58.8 56 0.0019 30.7 9.6 61 227-288 475-548 (592)
364 4a9v_A PHOX; hydrolase, beta-p 55.9 50 0.0017 31.1 8.7 62 171-247 477-550 (592)
365 3zwu_A Alkaline phosphatase PH 54.1 37 0.0013 32.1 7.7 60 126-187 477-548 (592)
366 3qhy_B Beta-lactamase inhibito 51.8 1E+02 0.0036 25.6 14.2 143 126-300 25-167 (282)
367 3f7f_A Nucleoporin NUP120; nuc 49.5 1.1E+02 0.0038 29.6 10.2 37 171-209 223-259 (729)
368 3mez_A Mannose-specific lectin 46.4 72 0.0025 22.2 7.5 78 231-322 22-99 (111)
369 1olz_A Semaphorin 4D; developm 40.1 1.3E+02 0.0044 28.9 9.2 70 126-195 398-477 (663)
370 2zux_A YESW protein; beta-prop 39.6 2.4E+02 0.0083 26.4 19.8 96 249-351 292-408 (591)
371 3no0_A DNA gyrase subunit A; D 32.1 2.2E+02 0.0074 23.6 22.1 181 124-316 67-264 (276)
372 3l6v_A GYRA, DNA gyrase subuni 31.1 2.7E+02 0.0091 24.3 21.1 164 125-300 46-264 (370)
373 1suu_A DNA gyrase subunit A; t 30.7 2.5E+02 0.0084 23.8 22.7 156 134-300 6-180 (312)
374 3al9_A Plexin-A2; beta-propell 29.9 1.2E+02 0.0041 28.3 7.0 70 126-195 401-476 (539)
375 3mez_B Mannose-specific lectin 28.6 1.5E+02 0.0051 20.6 10.3 45 273-322 59-103 (113)
376 1q47_A Semaphorin 3A; beta pro 27.4 1.7E+02 0.0059 26.8 7.5 70 126-195 405-487 (495)
377 1zi0_A DNA gyrase subunit A; b 26.8 2.9E+02 0.0098 23.3 20.1 156 134-300 1-175 (307)
378 3qhy_B Beta-lactamase inhibito 22.8 3.2E+02 0.011 22.5 16.6 143 126-300 64-206 (282)
379 4gz8_A Semaphorin-3A; multi-do 22.7 2.4E+02 0.0084 27.0 7.8 70 126-195 413-495 (667)
380 1sqj_A OXG-RCBH, oligoxylogluc 21.6 5.7E+02 0.019 24.9 15.7 64 124-188 14-83 (789)
381 3uc1_A DNA gyrase subunit A; D 20.3 4E+02 0.014 22.7 23.6 161 127-300 44-227 (327)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-36 Score=280.15 Aligned_cols=246 Identities=17% Similarity=0.203 Sum_probs=215.6
Q ss_pred eeeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 017421 83 VKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE 154 (372)
Q Consensus 83 ~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 154 (372)
...+.+|... |++.+.+ .+.|..+++|+.........+.+|...|.+++|+|++++|++|+.|++|+|||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4456666553 4444432 5567789999998888888899999999999999999999999999999999999
Q ss_pred CCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEE
Q 017421 155 RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLK 234 (372)
Q Consensus 155 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 234 (372)
++..+.. ..+|...|.+++|+|++++|++++.|+.|++||++++.+..... +|...|.++.
T Consensus 181 ~~~~~~~---~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~----------------~h~~~v~~~~ 241 (410)
T 1vyh_C 181 GFECIRT---MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT----------------GHREWVRMVR 241 (410)
T ss_dssp SSCEEEC---CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----------------CCSSCEEEEE
T ss_pred CCceeEE---EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----------------CCCccEEEEE
Confidence 8866654 56888899999999999999999999999999999987644332 5777999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCC--------------------CCEEEEEeCCCeE
Q 017421 235 FSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES--------------------GHLIYSGSDDNLC 294 (372)
Q Consensus 235 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~--------------------~~~l~s~~~dg~i 294 (372)
|+|++++|++|+.|+.|++||+.++++...+.+|...|.+++|+ |+ +.+|++|+.|+.|
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA-PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-CSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEc-CcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999999 54 6799999999999
Q ss_pred EEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 295 KVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 295 ~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
++||+++ +.+|...|.+++|+|+|++|++++ .|++|++||+.+++.+..+.+|.
T Consensus 321 ~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s------~D~~i~vwd~~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA------DDKTLRVWDYKNKRCMKTLNAHE 380 (410)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE------TTTEEEEECCTTSCCCEEEECCS
T ss_pred EEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCCceEEEEcCCC
Confidence 9999873 447899999999999999999886 69999999999999999998884
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-35 Score=268.18 Aligned_cols=256 Identities=16% Similarity=0.213 Sum_probs=216.0
Q ss_pred CCCccccceeeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCC
Q 017421 75 KRHLPVSTVKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS 146 (372)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 146 (372)
..+.+....+.+.+|... +++++.+ .+.|..+++|+.........+..|...|.+++|+|++++|++|+.|+
T Consensus 40 ~~~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~ 119 (340)
T 1got_B 40 VGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp CCCCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTC
T ss_pred cccccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCC
Confidence 334455667778888764 4555543 56678899999888777778889999999999999999999999999
Q ss_pred cEEEEeCCCCeE-EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCC
Q 017421 147 QIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG 225 (372)
Q Consensus 147 ~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (372)
.|++|++.+... ........+|...|.++.|++++. +++++.|+.|++||+++++...... +
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~----------------~ 182 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT----------------G 182 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC----------------C
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc----------------C
Confidence 999999986531 112223567888999999998765 8899999999999999887644332 5
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc--
Q 017421 226 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-- 303 (372)
Q Consensus 226 h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-- 303 (372)
|...|.+++|+|++++|++|+.|+.|++||++++.+...+.+|...|++++|+ |++++|++|+.|+.|++||++...
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 77799999999999999999999999999999999999999999999999999 999999999999999999997432
Q ss_pred ------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 304 ------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 304 ------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.+...|++++|+|+|++|++++ .|+.|++||+.+++.+..+.+|.
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~------~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGRLLLAGY------DDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEccCCcccceEEEEECCCCCEEEEEC------CCCeEEEEEcccCcEeeEeecCC
Confidence 2345799999999999999986 68999999999999999998884
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=264.30 Aligned_cols=229 Identities=19% Similarity=0.240 Sum_probs=202.9
Q ss_pred ccCCceeEeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421 100 SAADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (372)
.+.|..+++|++..... .+.+.+|...|.+++|++++.++++++.|++|++||+.+++.+.. ...+...+.+++|
T Consensus 54 gs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~---~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 54 GSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKS---IDAGPVDAWTLAF 130 (321)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCTTCCCCEEE
T ss_pred EcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEE---EeCCCccEEEEEE
Confidence 56678899998875542 345789999999999999999999999999999999999877665 3456667899999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 017421 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (372)
Q Consensus 178 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~ 257 (372)
+|++++|++++.+|.|++|++++++...... .|...|.+++|+|++++|++|+.|+.|++||++
T Consensus 131 spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~----------------~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 131 SPDSQYLATGTHVGKVNIFGVESGKKEYSLD----------------TRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 194 (321)
T ss_dssp CTTSSEEEEECTTSEEEEEETTTCSEEEEEE----------------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEcCCCcEEEEEcCCCceeEEec----------------CCCceEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999999999887643322 345589999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 258 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
+++.+..+.+|..+|.+++|+ |++++|++++.|+.|++||++. +.+|...|.+++|+|++++|++++
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s------ 267 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS------ 267 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------
T ss_pred CCcEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe------
Confidence 999999999999999999999 9999999999999999999873 457899999999999999999886
Q ss_pred eeceEEEeecccceEEEEEeeeE
Q 017421 332 YSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 332 ~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.|++|++||+.+++.+..+.+|.
T Consensus 268 ~D~~v~iwd~~~~~~~~~~~~h~ 290 (321)
T 3ow8_A 268 SDKSVKVWDVGTRTCVHTFFDHQ 290 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCcEEEEeCCCCEEEEEEcCCC
Confidence 79999999999999999998873
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-35 Score=261.90 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=203.1
Q ss_pred cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC
Q 017421 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
|++++.+ .+.|..+++|+.........+..|..+|.+++|+|++++|++|+.|+.|++||+.+++.+.. ..+|.
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~---~~~h~ 97 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAHP 97 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE---EeCCC
Confidence 4555543 55677899999877776777889999999999999999999999999999999999876665 56788
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCC
Q 017421 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSD 248 (372)
Q Consensus 170 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~d 248 (372)
..|.+++|+|++++|++|+.|+.|++||++++..... .. .+|...|.+++|+| ++.+|++|+.|
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~--~~-------------~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--TF-------------EGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE--EE-------------CCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh--hh-------------cccCCcEEEEEECCCCCCEEEEEeCC
Confidence 8999999999999999999999999999987643211 11 15777999999999 67899999999
Q ss_pred CeEEEEECCCCeEEEEee-cCCCCeEEEEEeC-CCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCe
Q 017421 249 DCIYVYDLEANKLSLRIL-AHTSDVNTVCFGD-ESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKY 320 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~ 320 (372)
++|++||++++.....+. .|...+..+.|+| +++.+|++++.|+.|++||+++ +.+|...|..++|+|++++
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence 999999998877665554 5668899999984 3788999999999999999873 4589999999999999999
Q ss_pred EEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 321 LIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 321 l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
|++++ .|++|++||..+++.++.+.+|
T Consensus 243 l~s~s------~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 243 IISGS------EDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EEEEE------TTSCEEEEETTTCCEEEEECCS
T ss_pred EEEEc------CCCeEEEEECCCCceeeeccCC
Confidence 99886 7999999999999999998876
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=265.27 Aligned_cols=223 Identities=13% Similarity=0.084 Sum_probs=185.6
Q ss_pred ccCCceeEeeeeeCCCCCcc----ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLPVNGPWP----VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.+..+++|+....+.... +.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+.. ..+|...|.++
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~---~~~h~~~V~~~ 175 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS---YRAHAAQVTCV 175 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEE
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---EcCcCCceEEE
Confidence 55667889999877665443 348999999999999999999999999999999999977665 56888899999
Q ss_pred EECCCCC-EEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEE
Q 017421 176 SLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYV 253 (372)
Q Consensus 176 ~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~i 253 (372)
+|+|++. +|++++.|+.|++||+++++........ .|...+.+++|+|+ +++|++|+.||.|++
T Consensus 176 ~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 176 AASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS--------------APGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------------CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EecCCCCCceeeeccccccccccccccceeeeeecc--------------eeeccceeeeecCCCCcceEEeccCCcEEE
Confidence 9999875 7889999999999999988764433211 23457899999995 578899999999999
Q ss_pred EECCCCeEEEEeecCCCCeEEEEEeCCCC-CEEEEEeCCCeEEEEeccc-----ccCCCCCeeEEEeccCCCeE-EEEee
Q 017421 254 YDLEANKLSLRILAHTSDVNTVCFGDESG-HLIYSGSDDNLCKVNSVLL-----LTRSINPCNKYLFNPCNKYL-IIYLI 326 (372)
Q Consensus 254 wd~~~~~~~~~~~~~~~~v~~~~~sp~~~-~~l~s~~~dg~i~vwd~~~-----~~~~~~~v~~~~~s~~g~~l-~~~~~ 326 (372)
||+++++++..+.+|...|++++|+ |++ ++|++|+.|++|+|||+++ +.+|...|++++|+|+++.+ ++++
T Consensus 242 wd~~~~~~~~~~~~h~~~v~~v~fs-p~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s- 319 (344)
T 4gqb_B 242 VDTKSTSCVLSSAVHSQCVTGLVFS-PHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG- 319 (344)
T ss_dssp EESCC--CCEEEECCSSCEEEEEEC-SSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE-
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEc-cCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc-
Confidence 9999999999999999999999999 766 6899999999999999874 35899999999999998754 4555
Q ss_pred eeEEEeeceEEEeecccceE
Q 017421 327 LVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~~~~~ 346 (372)
+|++|++|++.+...
T Consensus 320 -----~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 320 -----WDHQVVHHVVPTEPL 334 (344)
T ss_dssp -----TTSCEEEEECCC---
T ss_pred -----CCCeEEEEECCCCCC
Confidence 799999999987543
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-35 Score=259.46 Aligned_cols=213 Identities=15% Similarity=0.133 Sum_probs=187.4
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|.+.|.+++|+|++++|++++.||.|++||+.++..+.. ...|..+|.++.|+|++++|++|+.|+.|++|
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEE---eeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 345778999999999999999999999999999999999876655 45677789999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeecCCCCeEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNTV 275 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~ 275 (372)
|+.+++...... +|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.++
T Consensus 83 d~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 83 NYNTGEKVVDFE----------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (304)
T ss_dssp ETTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEE
T ss_pred ECCCCcEEEEEe----------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEE
Confidence 999987644333 57789999999999999999999999999999887 5567788999999999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEecc--CCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNP--CNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~--~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+|+|.++.+|++|+.|++|++||++... .+...+..+.|+| ++.+|++++ .|++|++||+.+++.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s------~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS------DDLTIKIWDYQTKSC 220 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE------TTSEEEEEETTTTEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc------CCCeEEEEeCCCCcc
Confidence 9995578999999999999999986322 4567889999987 677888886 699999999999999
Q ss_pred EEEEeeeE
Q 017421 347 FYSFMVHI 354 (372)
Q Consensus 347 ~~~~~~h~ 354 (372)
+..+.+|.
T Consensus 221 ~~~~~~h~ 228 (304)
T 2ynn_A 221 VATLEGHM 228 (304)
T ss_dssp EEEEECCS
T ss_pred ceeeCCCC
Confidence 99999883
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-34 Score=261.83 Aligned_cols=257 Identities=18% Similarity=0.204 Sum_probs=214.9
Q ss_pred CCCccccceeeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCC
Q 017421 75 KRHLPVSTVKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS 146 (372)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 146 (372)
.........+.+.+|... |++++.+ .+.|..+++|+..+......+..|...|.+++|+|++++|++|+.|+
T Consensus 49 ~~~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 49 LGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp CCCCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS
T ss_pred ccccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 334455667788888874 3555533 66677899999888877778888999999999999999999999999
Q ss_pred cEEEEeCCCCeE---EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCC
Q 017421 147 QIRIYDVERGWK---IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD 223 (372)
Q Consensus 147 ~i~vwd~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (372)
.+++|++..... .........|...|.++.|+|++..|++++.|+.|++||+++++......
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--------------- 193 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--------------- 193 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------------
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---------------
Confidence 999999864311 01112244678889999999999999999999999999999987654433
Q ss_pred CCccccEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc
Q 017421 224 GGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL 301 (372)
Q Consensus 224 ~~h~~~i~~~~~sp--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~ 301 (372)
+|...|.+++|+| ++++|++|+.||.|++||+++++++..+.+|...|++++|+ |++.+|++++.|++|++||++.
T Consensus 194 -~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 194 -GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp -CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTT
T ss_pred -CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCC
Confidence 5777999999988 47899999999999999999999999999999999999999 9999999999999999999974
Q ss_pred cc--------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 302 LT--------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 302 ~~--------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.. .+...+.+++|+|+|++|+++. .|++|++||+.+++.+..+.+|.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~------~d~~i~vwd~~~~~~~~~l~~h~ 326 (354)
T 2pbi_B 272 DREVAIYSKESIIFGASSVDFSLSGRLLFAGY------NDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCSEEEEECCCS
T ss_pred CcEEEEEcCCCcccceeEEEEeCCCCEEEEEE------CCCcEEEEECCCCceEEEEECCC
Confidence 32 2345789999999999999886 68999999999999998888873
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=259.02 Aligned_cols=217 Identities=23% Similarity=0.253 Sum_probs=193.6
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.|..+++|+.........+..|...+.+++|+|++++|++|+.||.|++|++.++..... ...+...|.+++|+|
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~---~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS---LDTRGKFILSIAYSP 174 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE---EECSSSCEEEEEECT
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE---ecCCCceEEEEEECC
Confidence 56678899999877777777888999999999999999999999999999999998866554 445666899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
++++|++++.||.|++||+++++...... +|..+|.+++|+|++++|++++.|+.|++||++++
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~----------------~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLE----------------GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEc----------------ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 99999999999999999999887644332 47779999999999999999999999999999999
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
+....+.+|...|.+++|+ |++.+|++++.|++|++||+++ +..|...|.+++|+|+|++|++++ .|
T Consensus 239 ~~~~~~~~h~~~v~~~~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~------~d 311 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFC-PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG------DD 311 (321)
T ss_dssp CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE------TT
T ss_pred ceeEEEcCCCCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe------CC
Confidence 9999999999999999999 9999999999999999999873 447899999999999999999886 68
Q ss_pred ceEEEeecc
Q 017421 334 PNILLDNYF 342 (372)
Q Consensus 334 ~~i~lw~~~ 342 (372)
++|++||+.
T Consensus 312 ~~i~vwd~p 320 (321)
T 3ow8_A 312 QEIHIYDCP 320 (321)
T ss_dssp CCEEEEECC
T ss_pred CeEEEEeCC
Confidence 999999863
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-34 Score=264.69 Aligned_cols=212 Identities=18% Similarity=0.166 Sum_probs=191.6
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|..+|++++|+|++++|++|+.||+|+|||+.++..... ..+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~---l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE---ECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE---EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 456789999999999999999999999999999999998866554 56888899999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
|+.++++..... +|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|...|.++.
T Consensus 178 d~~~~~~~~~~~----------------~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 178 DFQGFECIRTMH----------------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241 (410)
T ss_dssp ETTSSCEEECCC----------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred eCCCCceeEEEc----------------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence 998877543332 5778999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccC--------------------CCeEEEEeeeeEE
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPC--------------------NKYLIIYLILVIS 330 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~--------------------g~~l~~~~~~~~~ 330 (372)
|+ +++.+|++|+.|+.|++||+++ +..|...|.+++|+|+ |.+|++++
T Consensus 242 ~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----- 315 (410)
T 1vyh_C 242 PN-QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----- 315 (410)
T ss_dssp EC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-----
T ss_pred EC-CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-----
Confidence 99 9999999999999999999873 4578899999999997 56788776
Q ss_pred EeeceEEEeecccceEEEEEeeeE
Q 017421 331 IYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.|++|++||+.+++.+..+.+|.
T Consensus 316 -~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 316 -RDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCS
T ss_pred -CCCeEEEEECCCCceEEEEECCC
Confidence 68999999999999999998874
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.7e-33 Score=249.40 Aligned_cols=211 Identities=24% Similarity=0.331 Sum_probs=189.1
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
..+.+|...|++++|+|++++|++++.||.|++|++.++..... ..+|...|.+++|+|++++|++++.|+.|++||
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchh---hccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999988866554 557888999999999999999999999999999
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEE
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 277 (372)
+++++...... +|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|
T Consensus 94 ~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 94 VSSGKCLKTLK----------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp TTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCCcEEEEEc----------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 99887644332 46779999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEecccc-------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 278 GDESGHLIYSGSDDNLCKVNSVLLL-------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 278 sp~~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+ +++++|++++.|+.|++||+++. ..+..++..++|+|++++|++++ .|+.|++||+.+++.+..+
T Consensus 158 ~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 158 N-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT------LDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp C-TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE------TTTEEEEEETTTTEEEEEE
T ss_pred c-CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc------CCCeEEEEECCCCcEEEEE
Confidence 9 99999999999999999999743 24567899999999999999886 6899999999999999888
Q ss_pred eeeE
Q 017421 351 MVHI 354 (372)
Q Consensus 351 ~~h~ 354 (372)
.+|.
T Consensus 231 ~~~~ 234 (312)
T 4ery_A 231 TGHK 234 (312)
T ss_dssp CSSC
T ss_pred EecC
Confidence 7763
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=257.32 Aligned_cols=208 Identities=11% Similarity=0.098 Sum_probs=175.9
Q ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-eecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 200 (372)
.|...|.+++|+|++ .|++|+.||+|+|||+.+++.+... ....+|...|++++|+|++++|++|+.|+.|++||+++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 456789999999985 6889999999999999987654332 23457888999999999999999999999999999999
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEee--cCCCCeEEEEE
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTVCF 277 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~ 277 (372)
++...... +|...|++++|+|++ .+|++++.|++|++||++++++...+. .|...+.+++|
T Consensus 159 ~~~~~~~~----------------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 159 QVVLSSYR----------------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp TEEEEEEC----------------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEE
T ss_pred CcEEEEEc----------------CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeee
Confidence 87654433 688899999999998 478999999999999999998877764 45667999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCC-CeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 278 GDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCN-KYLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 278 sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g-~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+|.++++|++|+.||.|++||+++ +..|...|++++|+|+| ++|++++ .|++|++||+.+++.+ .+
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs------~D~~i~vwd~~~~~~~-~~ 295 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS------EDCSLAVLDSSLSELF-RS 295 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE------TTSCEEEECTTCCEEE-EE
T ss_pred cCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe------CCCeEEEEECCCCcEE-EE
Confidence 966788999999999999999973 45899999999999998 5677775 6999999999988755 45
Q ss_pred eee
Q 017421 351 MVH 353 (372)
Q Consensus 351 ~~h 353 (372)
.+|
T Consensus 296 ~~H 298 (344)
T 4gqb_B 296 QAH 298 (344)
T ss_dssp CCC
T ss_pred cCC
Confidence 666
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.3e-34 Score=258.12 Aligned_cols=227 Identities=9% Similarity=0.065 Sum_probs=182.0
Q ss_pred ccCCceeEeeeeeCCCCCc----cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLPVNGPW----PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.+..+++|+........ ...+|...|++++|+|++++|++|+.|+.|++||+.++..+.. ...|...|.++
T Consensus 111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~---~~~h~~~v~~v 187 (357)
T 4g56_B 111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS---YNAHSSEVNCV 187 (357)
T ss_dssp EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEE
T ss_pred EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---EcCCCCCEEEE
Confidence 5566778899877655332 3458999999999999999999999999999999999876665 56788899999
Q ss_pred EECCCCC-EEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEE
Q 017421 176 SLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYV 253 (372)
Q Consensus 176 ~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~i 253 (372)
+|+|++. ++++++.|+.|++||+++++........ .|...+.+++|+|+ +.+|++|+.|+.|++
T Consensus 188 ~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~--------------~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC--------------ASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp EECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT--------------TCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EEccCCCceeeeeccCCceEEEECCCCceeeeeeec--------------cccccccchhhhhcccceEEEeecccceeE
Confidence 9999875 7899999999999999988754332211 24568999999997 468899999999999
Q ss_pred EECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc-----cCCCCCeeEEEecc-CCCeEEEEeee
Q 017421 254 YDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL-----TRSINPCNKYLFNP-CNKYLIIYLIL 327 (372)
Q Consensus 254 wd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~v~~~~~s~-~g~~l~~~~~~ 327 (372)
||+++++++..+.+|...|++++|+|..+++|++|+.|++|+|||+++. .+|...|++++|+| ++++|++++
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s-- 331 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVG-- 331 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEE--
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEc--
Confidence 9999999999999999999999999444578999999999999999743 37899999999998 788998886
Q ss_pred eEEEeeceEEEeecccceEEEE
Q 017421 328 VISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 328 ~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
+|++|++|++.+......
T Consensus 332 ----~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 332 ----WDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp ----TTSCEEEEECC-------
T ss_pred ----CCCeEEEEECCCCCcccc
Confidence 799999999976554443
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=254.57 Aligned_cols=203 Identities=21% Similarity=0.268 Sum_probs=175.5
Q ss_pred cccCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 119 PVDQTTS-RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 119 ~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
.+.+|.. .|++++|+|+|++||+|+.|++|+||++.++..........+|...|.+++|+|++++|++++.|+.+++||
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4567877 899999999999999999999999999988765544444578889999999999999999999999999999
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEeecCCCCeEE
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN---KLSLRILAHTSDVNT 274 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~v~~ 274 (372)
+..+.......+ .+|...|.+++|+|++++|++++.|+.|++||++++ .++..+.+|...|.+
T Consensus 90 ~~~~~~~~~~~~--------------~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 155 (345)
T 3fm0_A 90 KNQDDFECVTTL--------------EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKH 155 (345)
T ss_dssp ECCC-EEEEEEE--------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEE
T ss_pred ccCCCeEEEEEc--------------cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEE
Confidence 987653222221 157789999999999999999999999999999876 356677889999999
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEecc--------cccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVL--------LLTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~--------~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
++|+ |++++|++++.|+.|++||++ ++.+|...|++++|+|+|++|++++ .|++|++|+..
T Consensus 156 ~~~~-p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s------~D~~v~iW~~~ 224 (345)
T 3fm0_A 156 VVWH-PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS------DDRTVRIWRQY 224 (345)
T ss_dssp EEEC-SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEEEE
T ss_pred EEEC-CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe------CCCeEEEeccc
Confidence 9999 999999999999999999986 3458899999999999999999886 68888999863
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=252.07 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=158.3
Q ss_pred cCCCCcc---ccCCceeEeeeeeCCCC---CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc
Q 017421 93 YSGRGRF---SAADCCHMLSRYLPVNG---PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (372)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 166 (372)
|++++.+ .+.|..+++|+...... .....+|...|.+++|+|++++|++|+.|++|+||++..+.. .......
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~-~~~~~~~ 102 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF-ECVTTLE 102 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E-EEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe-EEEEEcc
Confidence 4555543 56678899998876532 123468999999999999999999999999999999987632 1223366
Q ss_pred cCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe
Q 017421 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (372)
Q Consensus 167 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s 246 (372)
+|...|.+++|+|++++|++++.|+.|++||+.++.......... +|...|.+++|+|++++|++++
T Consensus 103 ~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-------------SHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-------------CCCSCEEEEEECSSSSCEEEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-------------CcCCCeEEEEECCCCCEEEEEe
Confidence 888899999999999999999999999999998765322222111 4677999999999999999999
Q ss_pred CCCeEEEEECCCCe--EEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEec
Q 017421 247 SDDCIYVYDLEANK--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSV 299 (372)
Q Consensus 247 ~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~ 299 (372)
.|+.|++||+++++ +...+.+|...|++++|+ |++++|++++.|++|++||.
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEE
T ss_pred CCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEecc
Confidence 99999999998875 456788999999999999 99999999999999999985
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-33 Score=256.48 Aligned_cols=235 Identities=20% Similarity=0.220 Sum_probs=195.5
Q ss_pred cCCCCcc--ccCCceeEeeeeeCCCCCccccCC------------------CCceEEEEECCCCCEEEEEeCCCcEEEEe
Q 017421 93 YSGRGRF--SAADCCHMLSRYLPVNGPWPVDQT------------------TSRAYVSQFSADGSLFVAGFQASQIRIYD 152 (372)
Q Consensus 93 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 152 (372)
|++++.+ .+.++.+.+|+.........+..| ...|.+++|+|++++|++|+.|+.|+|||
T Consensus 72 fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd 151 (393)
T 1erj_A 72 FSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 151 (393)
T ss_dssp ECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 5566554 344566777776554443334333 23499999999999999999999999999
Q ss_pred CCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEE
Q 017421 153 VERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFS 232 (372)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 232 (372)
+.+++.+.. ..+|...|.+++|+|++++|++++.|+.|++||+++++...... +...+.+
T Consensus 152 ~~~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----------------~~~~v~~ 211 (393)
T 1erj_A 152 IENRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-----------------IEDGVTT 211 (393)
T ss_dssp TTTTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEEE
T ss_pred CCCCcEEEE---EccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-----------------cCCCcEE
Confidence 998866554 56888899999999999999999999999999999887643332 2347999
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEe-------ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc---
Q 017421 233 LKFST-DGRELVAGSSDDCIYVYDLEANKLSLRI-------LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL--- 301 (372)
Q Consensus 233 ~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~--- 301 (372)
++|+| ++++|++|+.|+.|++||+++++.+..+ .+|...|++++|+ |++++|++|+.|+.|++||++.
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEEC-----
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCC
Confidence 99999 8999999999999999999999877766 5788999999999 9999999999999999999863
Q ss_pred ---------------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 302 ---------------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 302 ---------------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
+.+|...|.+++|+|++++|++++ .|+.|++||..+++.+..+.+|.
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs------~D~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS------KDRGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEE------TTSEEEEEETTTCCEEEEEECCS
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe------CCCeEEEEECCCCeEEEEECCCC
Confidence 236888899999999999999886 68999999999999999998883
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-32 Score=248.19 Aligned_cols=211 Identities=16% Similarity=0.187 Sum_probs=183.6
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|.+.|++++|+|++++|++|+.||+|+|||+.++..+.. ...|...|.+++|+|++++|++++.|+.|++|
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE---EECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE---eecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345789999999999999999999999999999999998876654 45677789999999999999999999999999
Q ss_pred ECCCCceeee-cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421 197 DVGSGTMESL-ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 275 (372)
Q Consensus 197 d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 275 (372)
++.++..... .... .+|...|.++.|+|++. +++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 125 ~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 125 NLKTREGNVRVSREL-------------AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp ETTTCSBSCEEEEEE-------------ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred ECccCCCcceeEEEe-------------cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEE
Confidence 9987642111 1111 15777999999998875 8899999999999999999999999999999999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
+|+ |++++|++|+.|+.|++||++. +..|...|++++|+|++++|++++ .|++|++||+.+++.+..
T Consensus 191 ~~~-~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 191 SLA-PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS------DDATCRLFDLRADQELMT 263 (340)
T ss_dssp EEC-TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEEEE
T ss_pred EEC-CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc------CCCcEEEEECCCCcEEEE
Confidence 999 8999999999999999999873 457899999999999999999886 689999999998887765
Q ss_pred Ee
Q 017421 350 FM 351 (372)
Q Consensus 350 ~~ 351 (372)
+.
T Consensus 264 ~~ 265 (340)
T 1got_B 264 YS 265 (340)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-32 Score=243.87 Aligned_cols=212 Identities=16% Similarity=0.149 Sum_probs=182.3
Q ss_pred cccCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCe--EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGW--KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 195 (372)
.+.+|.+.|++++|+|++ ++|++|+.|++|++|++.... .........+|...|.+++|+|++++|++++.|+.|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 468999999999999965 899999999999999986421 11223346688889999999999999999999999999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 275 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 275 (372)
||+.+++...... +|...|.+++|+|++.+|++|+.|++|++||++ ++++..+.+|...|.++
T Consensus 92 wd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 92 WDVATGETYQRFV----------------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQV 154 (319)
T ss_dssp EETTTTEEEEEEE----------------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEE
T ss_pred EECCCCCeeEEEc----------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEE
Confidence 9999987644332 577899999999999999999999999999997 55677888999999999
Q ss_pred EEeCC-----CCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 276 CFGDE-----SGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 276 ~~sp~-----~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+|+|. ++..|++++.|+.|++||++. +.+|...|.+++|+|+|++|++++ .|+.|++||+.++
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~------~dg~i~iwd~~~~ 228 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG------KDGEIMLWNLAAK 228 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE------TTCEEEEEETTTT
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCC
Confidence 99932 455899999999999999974 347999999999999999999886 6899999999999
Q ss_pred eEEEEEeee
Q 017421 345 RTFYSFMVH 353 (372)
Q Consensus 345 ~~~~~~~~h 353 (372)
+.+..+..|
T Consensus 229 ~~~~~~~~~ 237 (319)
T 3frx_A 229 KAMYTLSAQ 237 (319)
T ss_dssp EEEEEEECC
T ss_pred cEEEEecCC
Confidence 988887655
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.6e-33 Score=254.00 Aligned_cols=244 Identities=18% Similarity=0.229 Sum_probs=182.8
Q ss_pred ccceeeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCE-------------
Q 017421 80 VSTVKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSL------------- 138 (372)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~------------- 138 (372)
....+.+.+|... |++.+.+ .+.|..+++|+.........+..|...|.+++|+|++++
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 3455667777763 4555533 556677888886655444445555555555555555544
Q ss_pred -------------------------------------EEEEeCCCcEEEEeCCCCeEEEEe--eecccCCcceEEEEECC
Q 017421 139 -------------------------------------FVAGFQASQIRIYDVERGWKIQKD--ILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 139 -------------------------------------l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~ 179 (372)
|++|+.|++|++||+.++..+... ....+|...|.++.|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 455555555555555555443322 11246777899999987
Q ss_pred -CCCEEEEEeCCCeEEEEECCCC-ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 017421 180 -DQRHLVYASMSPIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (372)
Q Consensus 180 -~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~ 257 (372)
++++|++|+.|+.|++||++.. ....... +|...|++++|+|++++|++|+.|++|++||++
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~----------------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYH----------------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEEC----------------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEEC----------------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 8899999999999999999743 3222211 577899999999999999999999999999999
Q ss_pred CCeEEEEeecCC-------CCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------c----cCCCCCeeEEEeccCCCe
Q 017421 258 ANKLSLRILAHT-------SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------L----TRSINPCNKYLFNPCNKY 320 (372)
Q Consensus 258 ~~~~~~~~~~~~-------~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~----~~~~~~v~~~~~s~~g~~ 320 (372)
+++++..+..+. ..|++++|+ |+|++|++|+.||.|++||+.. + ..|...|++++|+|+|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFS-ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEEC-SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CCcEEEEecccccccccccCceEEEEEC-CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 999888876543 248999999 9999999999999999999752 1 468899999999999999
Q ss_pred EEEEeeeeEEEeeceEEEeecccceE
Q 017421 321 LIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 321 l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
|++++ +|++|++|++...+.
T Consensus 359 l~sgs------~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 359 LCTGS------WDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEEEC------TTSCEEEEECCSSSS
T ss_pred EEEee------CCCCEEEEecCCCcc
Confidence 99997 899999999887653
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.3e-32 Score=240.90 Aligned_cols=222 Identities=14% Similarity=0.138 Sum_probs=181.8
Q ss_pred ccCCceeEeeeeeCC--CCCccccCCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLPV--NGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.|..+++|+.... .....+.+|.+.|++++|+|+ +++|++|+.|++|+|||+.++... .......|...|.++
T Consensus 27 ~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~-~~~~~~~h~~~v~~v 105 (297)
T 2pm7_B 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS-QIAVHAVHSASVNSV 105 (297)
T ss_dssp EETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC-CCEEECCCSSCEEEE
T ss_pred EeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE-EEEEeecCCCceeEE
Confidence 566778999987643 345678899999999999874 899999999999999999876321 112245678889999
Q ss_pred EECCC--CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-------------CC
Q 017421 176 SLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-------------GR 240 (372)
Q Consensus 176 ~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-------------~~ 240 (372)
+|+|+ +.+|++++.|+.|++||++++...... ... +|...|.+++|+|+ ++
T Consensus 106 ~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-~~~-------------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~ 171 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI-IID-------------AHAIGVNSASWAPATIEEDGEHNGTKESR 171 (297)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-EEE-------------CCSSCEEEEEECCCC------------CC
T ss_pred EeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-eee-------------cccCccceEeecCCcccccccCCCCCCcc
Confidence 99997 889999999999999999876421111 111 46779999999997 57
Q ss_pred EEEEEeCCCeEEEEECCCCe----EEEEeecCCCCeEEEEEeCCC---CCEEEEEeCCCeEEEEecccc-----------
Q 017421 241 ELVAGSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVNSVLLL----------- 302 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~vwd~~~~----------- 302 (372)
+|++|+.|++|++||+++++ ....+.+|...|.+++|+ |+ +.+|++++.|++|++||++..
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s-p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~ 250 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS-PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKE 250 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC-CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeec
Confidence 99999999999999998765 566788999999999999 76 589999999999999998641
Q ss_pred cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 303 TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 303 ~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
..+...|.+++|+|+|++|++++ .|+.|++|+...
T Consensus 251 ~~~~~~v~~~~~s~~g~~las~~------~D~~v~lw~~~~ 285 (297)
T 2pm7_B 251 EKFPDVLWRASWSLSGNVLALSG------GDNKVTLWKENL 285 (297)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEE------TTSCEEEEEECT
T ss_pred ccCCCcEEEEEECCCCCEEEEEc------CCCcEEEEEECC
Confidence 25678899999999999999886 689999998763
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-32 Score=266.68 Aligned_cols=235 Identities=16% Similarity=0.152 Sum_probs=195.7
Q ss_pred ccCCCCcc--ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC
Q 017421 92 NYSGRGRF--SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 92 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
.|++++.. .+.+..+.+|+.........+.+|...|++++|+|+|++||+|+.|++|+|||+.++..... .....|.
T Consensus 25 ~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~-~~~~~~~ 103 (611)
T 1nr0_A 25 GNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK-TTIPVFS 103 (611)
T ss_dssp EECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEE-EEEECSS
T ss_pred eeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceee-EeecccC
Confidence 35565543 34456788888776677778899999999999999999999999999999999975432221 1245778
Q ss_pred cceEEEEECCCCCEEEEEeCC----CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-EEEE
Q 017421 170 WTVTDTSLSPDQRHLVYASMS----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVA 244 (372)
Q Consensus 170 ~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-~l~s 244 (372)
.+|.+++|+|+++.|++++.+ +.|++||. +...... .+|...|++++|+|++. .|++
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l----------------~gh~~~v~~v~f~p~~~~~l~s 165 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNL----------------TGQARAMNSVDFKPSRPFRIIS 165 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCC----------------CCCSSCEEEEEECSSSSCEEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCccee----------------cCCCCCceEEEECCCCCeEEEE
Confidence 899999999999999998865 46888874 3322111 16888999999999986 6999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------c-c------CCCCCeeE
Q 017421 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------L-T------RSINPCNK 311 (372)
Q Consensus 245 ~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~-~------~~~~~v~~ 311 (372)
++.|++|++||..++++...+.+|...|.+++|+ |+|++|++++.|++|++||+.+ + . .|...|.+
T Consensus 166 ~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fs-pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~ 244 (611)
T 1nr0_A 166 GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244 (611)
T ss_dssp EETTSCEEEEETTTBEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred EeCCCeEEEEECCCCeEeeeeccccCceEEEEEC-CCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEE
Confidence 9999999999999999999999999999999999 9999999999999999999753 2 2 68899999
Q ss_pred EEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421 312 YLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 312 ~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~ 352 (372)
++|+|+|++|++++ .|++|++||+.+++.+..+..
T Consensus 245 v~~spdg~~l~s~s------~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 245 LTWSPDGTKIASAS------ADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp EEECTTSSEEEEEE------TTSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEe------CCCeEEEEeCCCCceeeeecC
Confidence 99999999999886 799999999999998877653
No 21
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.7e-32 Score=240.63 Aligned_cols=224 Identities=12% Similarity=0.148 Sum_probs=189.6
Q ss_pred ccCCceeEeeeeeCCCC-----CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEE
Q 017421 100 SAADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 174 (372)
.+.|..+++|+...... ...+.+|...|.+++|+|++++|++|+.|++|+|||+.+++.+.. ..+|...|.+
T Consensus 36 ~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~---~~~h~~~v~~ 112 (319)
T 3frx_A 36 ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQR---FVGHKSDVMS 112 (319)
T ss_dssp EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEE
T ss_pred ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEE---EccCCCcEEE
Confidence 56677888998764332 346789999999999999999999999999999999999976655 5678889999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC------CCEEEEEeCC
Q 017421 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD------GRELVAGSSD 248 (372)
Q Consensus 175 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~------~~~l~s~s~d 248 (372)
++|+|++++|++++.|+.|++||++..... ... +|...|.++.|+|. +..|++++.|
T Consensus 113 ~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~-~~~----------------~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 175 (319)
T 3frx_A 113 VDIDKKASMIISGSRDKTIKVWTIKGQCLA-TLL----------------GHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTSCEEE-EEC----------------CCSSCEEEEEECCC------CCEEEEEETT
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEe----------------ccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence 999999999999999999999999754321 111 47779999999985 4589999999
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEE
Q 017421 249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLII 323 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~ 323 (372)
+.|++||+++.+....+.+|...|.+++|+ |++++|++++.||.|++||++..+ .+...|.+++|+|++.+|++
T Consensus 176 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp SCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEE
T ss_pred CEEEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEE
Confidence 999999999999999999999999999999 999999999999999999997432 34568999999999999998
Q ss_pred EeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 324 YLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 324 ~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
+. +..+++|++.....+..+.
T Consensus 255 ~~-------~~~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 255 AT-------ATGIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp EE-------TTEEEEEEETTEEEEEEEC
T ss_pred Ec-------CCCcEEEEeCcCeeeeccC
Confidence 84 5567788877766655543
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-32 Score=245.85 Aligned_cols=216 Identities=13% Similarity=0.109 Sum_probs=182.8
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|...|++++|+|++++|++|+.||+|+|||..++..... ...|...|.+++|+|++..+++++.|+.+++|
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~---~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA---VTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE---EecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 356789999999999999999999999999999999988866554 33456679999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
++.............. + .+|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++
T Consensus 134 ~~~~~~~~~~~~~~~~-----~-----~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKS-----V-----AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLD 203 (354)
T ss_dssp ECCCCTTCCSGGGCEE-----E-----EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEecccccccccccee-----e-----eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEE
Confidence 9875432111110000 0 14777999999999999999999999999999999999999999999999999
Q ss_pred EeCC-CCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421 277 FGDE-SGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 277 ~sp~-~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
|+|. ++++|++|+.||.|++||+++ +..|...|++++|+|++.+|++++ .|++|++||+..++.+..
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGS------DDATCRLYDLRADREVAI 277 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEEEE
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe------CCCeEEEEECCCCcEEEE
Confidence 9843 578999999999999999874 457899999999999999999886 689999999988876655
Q ss_pred Ee
Q 017421 350 FM 351 (372)
Q Consensus 350 ~~ 351 (372)
+.
T Consensus 278 ~~ 279 (354)
T 2pbi_B 278 YS 279 (354)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.1e-33 Score=254.75 Aligned_cols=216 Identities=14% Similarity=0.137 Sum_probs=184.3
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
..+.+|.+.|++++|+|++++|++|+.|++|+|||+.++..... ...|...|.+++|+|++++|++++.|+.+++||
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~---~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHA---IKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE---EECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceE---EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 45789999999999999999999999999999999999876654 456777899999999999999999999999999
Q ss_pred CCCCceeeec-ceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEe-----ecCCC
Q 017421 198 VGSGTMESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRI-----LAHTS 270 (372)
Q Consensus 198 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~ 270 (372)
+.+....... .... ...+|...|.++.|+|++ ..|++|+.|++|++||+++++.+..+ .+|..
T Consensus 137 ~~~~~~~~~~~~~~~----------~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 137 LSSQADRDGNMPVSR----------VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CCCCSSCCCSSTTCC----------BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred CCCCccccCCcccee----------eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 9764321100 0000 012688899999999974 57999999999999999999988777 57899
Q ss_pred CeEEEEEeCCCCCEEEEEeCCCeEEEEecc-------cccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 271 DVNTVCFGDESGHLIYSGSDDNLCKVNSVL-------LLTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-------~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
.|.+++|+|+++++|++|+.|+.|++||++ .+.+|...|.+++|+|+|++|++++ .|++|++||+.+
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~D~~i~lwd~~~ 280 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGS------DDGTCRLFDMRT 280 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEEC------SSSCEEEEETTT
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEc------CCCeEEEEECCC
Confidence 999999996799999999999999999986 2347899999999999999999987 799999999999
Q ss_pred ceEEEEEee
Q 017421 344 LRTFYSFMV 352 (372)
Q Consensus 344 ~~~~~~~~~ 352 (372)
++.+..+..
T Consensus 281 ~~~~~~~~~ 289 (380)
T 3iz6_a 281 GHQLQVYNR 289 (380)
T ss_dssp TEEEEEECC
T ss_pred CcEEEEecc
Confidence 988877654
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.7e-31 Score=236.44 Aligned_cols=246 Identities=20% Similarity=0.166 Sum_probs=202.1
Q ss_pred eeeeecccC-----ccCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 017421 83 VKMLAGREG-----NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE 154 (372)
Q Consensus 83 ~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 154 (372)
...+.+|.. .+++.+.+ .+.+..+++|..........+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 444555544 24555543 5567788899887777777788999999999999999999999999999999999
Q ss_pred CCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEE
Q 017421 155 RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLK 234 (372)
Q Consensus 155 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 234 (372)
++..+.. ..+|...|.++.|+|++++|++++.|+.|++||+++++...... .|..+|.+++
T Consensus 96 ~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~v~~~~ 156 (312)
T 4ery_A 96 SGKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP----------------AHSDPVSAVH 156 (312)
T ss_dssp TCCEEEE---EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC----------------CCSSCEEEEE
T ss_pred CCcEEEE---EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec----------------CCCCcEEEEE
Confidence 8876654 55788889999999999999999999999999999887643332 4667899999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------cCCCC
Q 017421 235 FSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------TRSIN 307 (372)
Q Consensus 235 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~~~~~ 307 (372)
|+|++++|++++.|+.|++||+++++.+..+. .+...+.+++|+ |++++|++++.|+.|++||++.. ..|..
T Consensus 157 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 235 (312)
T 4ery_A 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 235 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCC
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCC
Confidence 99999999999999999999999998877664 466789999999 99999999999999999999743 24443
Q ss_pred Ce--eEEEe-ccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 308 PC--NKYLF-NPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 308 ~v--~~~~~-s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.+ ....| .+++.+|++++ .|+.|++||+.+++.+..+.+|.
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGS------EDNLVYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECC------TTSCEEEEETTTCCEEEEECCCS
T ss_pred ceEEEEEEEEeCCCcEEEEEC------CCCEEEEEECCCchhhhhhhccC
Confidence 32 22334 46788888876 68999999999999999998883
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-31 Score=238.94 Aligned_cols=222 Identities=16% Similarity=0.178 Sum_probs=184.3
Q ss_pred ccCCceeEeeeeeCCCC-------CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcce
Q 017421 100 SAADCCHMLSRYLPVNG-------PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTV 172 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 172 (372)
.+.|..+++|+...... ...+.+|...|.+++|+|++.+|++|+.|++|++||+.++..+.. ..+|...|
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~---~~~h~~~v 121 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR---FVGHQSEV 121 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE---EECCCSCE
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE---EcCCCCcE
Confidence 55677899998865432 235689999999999999999999999999999999999876654 55788899
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC----------CEE
Q 017421 173 TDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG----------REL 242 (372)
Q Consensus 173 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~----------~~l 242 (372)
.+++|+|++++|++++.|+.|++||+......... ...+|...|.+++|+|++ .+|
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKFSSA--------------EKENHSDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEEECC--------------TTTSCSSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCceeeee--------------cccCCCceeeeeeeccccccccccCCCCCEE
Confidence 99999999999999999999999999743221111 011467799999999987 789
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc------CCCCCeeEEEecc
Q 017421 243 VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNP 316 (372)
Q Consensus 243 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~ 316 (372)
++++.|+.|++||. +.+....+.+|...|.+++|+ |+|++|++|+.|+.|++||++... .+...|.+++|+|
T Consensus 188 ~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp 265 (343)
T 2xzm_R 188 ASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNP 265 (343)
T ss_dssp EEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECS
T ss_pred EEEcCCCEEEEEcC-CCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECC
Confidence 99999999999994 567778888999999999999 999999999999999999985221 3556799999999
Q ss_pred CCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 317 CNKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 317 ~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
++++++++ .|+.+++|++.+++..
T Consensus 266 ~~~~la~~-------~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 266 KLQWVAVG-------TDQGVKIFNLMTQSKA 289 (343)
T ss_dssp SSCEEEEE-------ESSCEEEEESSSCCSC
T ss_pred CCCEEEEE-------CCCCEEEEEeCCCCCC
Confidence 99998877 4777888888776543
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-31 Score=238.62 Aligned_cols=208 Identities=15% Similarity=0.149 Sum_probs=163.6
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE-EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
..+.+|.+.|++++|+|+ +|++|+.|++|++|++..+.. .........|...|.+++|+|++++|++++.|+.|++|
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 356789999999999987 899999999999999987532 22211123488899999999999999999999999999
Q ss_pred ECCCCceee-ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeecCCCC
Q 017421 197 DVGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA----NKLSLRILAHTSD 271 (372)
Q Consensus 197 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~ 271 (372)
|+....... ....... ..+|...|.+++|+|++++|++++.|++|++||++. .+++..+.+|...
T Consensus 86 ~~~~~~~~~~~~~~~~~----------~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 155 (330)
T 2hes_X 86 AKEESADRTFEMDLLAI----------IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD 155 (330)
T ss_dssp EC-------CCCEEEEE----------EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSC
T ss_pred EcccCcCccccceeEEE----------EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCc
Confidence 986432100 0000000 015788999999999999999999999999999943 2567788899999
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEecc--------cccCCCCCeeEEEeccC--CCeEEEEeeeeEEEeeceEEEeec
Q 017421 272 VNTVCFGDESGHLIYSGSDDNLCKVNSVL--------LLTRSINPCNKYLFNPC--NKYLIIYLILVISIYSPNILLDNY 341 (372)
Q Consensus 272 v~~~~~sp~~~~~l~s~~~dg~i~vwd~~--------~~~~~~~~v~~~~~s~~--g~~l~~~~~~~~~~~d~~i~lw~~ 341 (372)
|.+++|+ |++.+|++++.|++|++||.+ .+.+|...|.+++|+|+ +..|++++ .|++|++|++
T Consensus 156 v~~v~~~-p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s------~D~~v~iw~~ 228 (330)
T 2hes_X 156 VKHVIWH-PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS------DDSTVRVWKY 228 (330)
T ss_dssp EEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE------TTSCEEEEEE
T ss_pred eEEEEEC-CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe------CCCeEEEEEe
Confidence 9999999 899999999999999999975 24579999999999999 66788775 6889999988
Q ss_pred ccc
Q 017421 342 FLL 344 (372)
Q Consensus 342 ~~~ 344 (372)
..+
T Consensus 229 ~~~ 231 (330)
T 2hes_X 229 MGD 231 (330)
T ss_dssp EEE
T ss_pred cCC
Confidence 664
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.2e-31 Score=235.60 Aligned_cols=204 Identities=17% Similarity=0.116 Sum_probs=169.4
Q ss_pred cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC--CCEEEEEeCCCeEEEE
Q 017421 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHIV 196 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~vw 196 (372)
.+.+|...|++++|+|+|++||+|+.|++|+||++..... .....+.+|..+|.+++|+|+ +++|++++.|+.|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 4678999999999999999999999999999999975311 111235689999999999874 8999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe--EEEEeecCCCCe
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDV 272 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~v 272 (372)
|++++........ .+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|
T Consensus 83 d~~~~~~~~~~~~--------------~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 83 KEENGRWSQIAVH--------------AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EBSSSCBCCCEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred EcCCCceEEEEEe--------------ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 9987753222111 146779999999997 8999999999999999998763 245677899999
Q ss_pred EEEEEeCCC-------------CCEEEEEeCCCeEEEEeccc----------ccCCCCCeeEEEeccCC---CeEEEEee
Q 017421 273 NTVCFGDES-------------GHLIYSGSDDNLCKVNSVLL----------LTRSINPCNKYLFNPCN---KYLIIYLI 326 (372)
Q Consensus 273 ~~~~~sp~~-------------~~~l~s~~~dg~i~vwd~~~----------~~~~~~~v~~~~~s~~g---~~l~~~~~ 326 (372)
.+++|+ |+ +++|++|+.|+.|++||++. +.+|...|.+++|+|++ .+|++++
T Consensus 149 ~~~~~~-p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s- 226 (297)
T 2pm7_B 149 NSASWA-PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS- 226 (297)
T ss_dssp EEEEEC-CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-
T ss_pred ceEeec-CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE-
Confidence 999999 54 57999999999999999863 34789999999999995 7888876
Q ss_pred eeEEEeeceEEEeecccc
Q 017421 327 LVISIYSPNILLDNYFLL 344 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~~~ 344 (372)
.|++|++||+.+.
T Consensus 227 -----~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 227 -----QDRTCIIWTQDNE 239 (297)
T ss_dssp -----TTSCEEEEEESST
T ss_pred -----CCCcEEEEEeCCC
Confidence 7999999998764
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-31 Score=244.54 Aligned_cols=233 Identities=19% Similarity=0.209 Sum_probs=190.2
Q ss_pred ccCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccC
Q 017421 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (372)
Q Consensus 92 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 168 (372)
.|++++.+ .+.+..+++|+.........+.+|...|.+++|+|++++|++++.|++|++||+.++...... .+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----~~ 205 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----SI 205 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----EC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE----Ec
Confidence 34555543 456778889988776666778899999999999999999999999999999999998665442 23
Q ss_pred CcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC
Q 017421 169 RWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (372)
Q Consensus 169 ~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~ 247 (372)
...+.+++|+| ++++|++++.|+.|++||++++.......... ....+|...|.+++|+|++++|++|+.
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~---------~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN---------ESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccc---------cCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 44699999999 89999999999999999999887543322110 011257889999999999999999999
Q ss_pred CCeEEEEECCCC------------eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCe
Q 017421 248 DDCIYVYDLEAN------------KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPC 309 (372)
Q Consensus 248 dg~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v 309 (372)
|+.|++||+++. .+...+.+|...|.+++|+ +++.+|++|+.|+.|++||+++ +.+|...|
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v 355 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT-QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV 355 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEEC-GGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCE
Confidence 999999999753 3456777899999999999 9999999999999999999873 45899999
Q ss_pred eEEEecc------CCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 310 NKYLFNP------CNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 310 ~~~~~s~------~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
.+++|++ ++++|++++ .|++|++|++...
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs------~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGS------GDCKARIWKYKKI 390 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEE------TTSEEEEEEEEEC
T ss_pred EEEEecCCcCcCCCCCEEEEEC------CCCcEEECccccc
Confidence 9999886 678888886 6999999998654
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-31 Score=237.18 Aligned_cols=225 Identities=14% Similarity=0.027 Sum_probs=173.8
Q ss_pred ccCCceeEeeeeeCCCC--Cccc-cC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE----EEEeeecccCCcc
Q 017421 100 SAADCCHMLSRYLPVNG--PWPV-DQ-TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK----IQKDILAKSLRWT 171 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~ 171 (372)
.+.|..+++|+...... ...+ .+ |...|.+++|+|++++|++|+.|++|+||++..... ........+|...
T Consensus 30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~ 109 (330)
T 2hes_X 30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE 109 (330)
T ss_dssp EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----C
T ss_pred EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCc
Confidence 45677888888765322 2223 34 999999999999999999999999999999854211 1122235688889
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCc-eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
|.+++|+|++++|++++.|+.|++||+.... ........ .+|...|.+++|+|++++|++++.|++
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-------------~~h~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-------------QEHSQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-------------CCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-------------ccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 9999999999999999999999999995432 11111111 157779999999999999999999999
Q ss_pred EEEEECCCC--eEEEEeecCCCCeEEEEEeCCC--CCEEEEEeCCCeEEEEecccc--------------c-CCCCCeeE
Q 017421 251 IYVYDLEAN--KLSLRILAHTSDVNTVCFGDES--GHLIYSGSDDNLCKVNSVLLL--------------T-RSINPCNK 311 (372)
Q Consensus 251 i~iwd~~~~--~~~~~~~~~~~~v~~~~~sp~~--~~~l~s~~~dg~i~vwd~~~~--------------~-~~~~~v~~ 311 (372)
|++||+.++ +++..+.+|...|.+++|+ |+ +.+|++++.|++|++||++.. . .|...|.+
T Consensus 177 i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (330)
T 2hes_X 177 VRIWKDYDDDWECVAVLNGHEGTVWSSDFD-KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYN 255 (330)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEEC-CSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEE
T ss_pred EEEEECCCCCeeEEEEccCCCCcEEEEEec-CCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEE
Confidence 999999876 6788889999999999999 66 678999999999999998632 1 38889999
Q ss_pred EEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 312 YLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 312 ~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
++|++++ +|++++ .|+.|++|+..+++
T Consensus 256 v~~s~~~-~l~s~~------~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 256 VAWGFNG-LIASVG------ADGVLAVYEEVDGE 282 (330)
T ss_dssp EEECTTS-CEEEEE------TTSCEEEEEEETTE
T ss_pred EEEcCCC-EEEEEe------CCCEEEEEEcCCCc
Confidence 9999876 555554 68899999987763
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.6e-31 Score=237.78 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=170.3
Q ss_pred ccccCCCCceEEEEE-----CC-CCCEEEEEeCCCcEEEEeCCCCeE----EEEeeecccCCcceEEEEECCCCCEEEEE
Q 017421 118 WPVDQTTSRAYVSQF-----SA-DGSLFVAGFQASQIRIYDVERGWK----IQKDILAKSLRWTVTDTSLSPDQRHLVYA 187 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~-----s~-~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 187 (372)
..+.+|...|++++| ++ ++++|++|+.|++|+|||+..... ........+|...|.+++|+|++.+++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 457899999999999 77 999999999999999999975421 11223356888899999999999999999
Q ss_pred eCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-
Q 017421 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL- 266 (372)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~- 266 (372)
+.|+.|++||+++++...... +|...|.+++|+|++++|++++.|+.|++||+... ......
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~----------------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~ 157 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFV----------------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAE 157 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEE----------------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCT
T ss_pred cCCCcEEEEECCCCcEEEEEc----------------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeec
Confidence 999999999999887644332 57789999999999999999999999999999844 333333
Q ss_pred --cCCCCeEEEEEeCCCC----------CEEEEEeCCCeEEEEecc-----cccCCCCCeeEEEeccCCCeEEEEeeeeE
Q 017421 267 --AHTSDVNTVCFGDESG----------HLIYSGSDDNLCKVNSVL-----LLTRSINPCNKYLFNPCNKYLIIYLILVI 329 (372)
Q Consensus 267 --~~~~~v~~~~~sp~~~----------~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~~~~~s~~g~~l~~~~~~~~ 329 (372)
.|...|.+++|+ |++ .+|++++.|+.|++||.. .+..|...|.+++|+|+|++|++++
T Consensus 158 ~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs---- 232 (343)
T 2xzm_R 158 KENHSDWVSCVRYS-PIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGG---- 232 (343)
T ss_dssp TTSCSSCEEEEEEC-CCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEE----
T ss_pred ccCCCceeeeeeec-cccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEc----
Confidence 688899999999 665 799999999999999965 3457899999999999999999886
Q ss_pred EEeeceEEEeecc
Q 017421 330 SIYSPNILLDNYF 342 (372)
Q Consensus 330 ~~~d~~i~lw~~~ 342 (372)
.|+.|++||+.
T Consensus 233 --~dg~v~iwd~~ 243 (343)
T 2xzm_R 233 --KDKKLLIWDIL 243 (343)
T ss_dssp --TTCEEEEEESS
T ss_pred --CCCeEEEEECC
Confidence 68889999983
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.4e-32 Score=252.96 Aligned_cols=214 Identities=15% Similarity=0.160 Sum_probs=177.5
Q ss_pred cccCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC-CCCEEEEEeCCCeEEEE
Q 017421 119 PVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 196 (372)
...+|...|++++|+| ++++||+|+.||.|+|||+.++.... .....+|...|++++|+| ++++|++++.||.|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~-~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT-FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE-EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee-EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 3456889999999999 56789999999999999998764322 233568889999999998 78999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
|++++........ ..+...+.+++|+|++++|++|+.||.|++||++. +.+..+.+|...|++++
T Consensus 193 d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 193 DFKGNILRVFASS--------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVA 257 (435)
T ss_dssp ETTSCEEEEEECC--------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEE
T ss_pred eccCCceeEEecc--------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeee
Confidence 9987654322211 02334688999999999999999999999999974 56677889999999999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEecccc---------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLLL---------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~~---------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
|+|....+|++++.|+.|++||++.. ..|...|++++|+|+|++|++++ .|+.|++||+.+++..
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~------~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD------QKSEIRVYSASQWDCP 331 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE------SSSCEEEEESSSSSSE
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc------CCCEEEEEECCCCccc
Confidence 99334458899999999999999742 36788999999999999999886 7999999999999888
Q ss_pred EEEeeeE
Q 017421 348 YSFMVHI 354 (372)
Q Consensus 348 ~~~~~h~ 354 (372)
..+..|.
T Consensus 332 ~~~~~~~ 338 (435)
T 4e54_B 332 LGLIPHP 338 (435)
T ss_dssp EEECCCC
T ss_pred eEEeccc
Confidence 8877664
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-31 Score=258.72 Aligned_cols=231 Identities=13% Similarity=0.066 Sum_probs=192.1
Q ss_pred ccCCCCcc---ccCCceeEeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEeCC----CcEEEEeCCCCeEEEEe
Q 017421 92 NYSGRGRF---SAADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERGWKIQKD 162 (372)
Q Consensus 92 ~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~ 162 (372)
.|++++.+ .+.|..+++|+...... ...+.+|.+.|.+++|+|++++|++++.+ +.|++||. +....
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~-- 141 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNG-- 141 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCB--
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcc--
Confidence 45677754 45577899998754433 23567899999999999999999998765 46888874 32322
Q ss_pred eecccCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCE
Q 017421 163 ILAKSLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE 241 (372)
Q Consensus 163 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 241 (372)
...+|...|.+++|+|++. .|++++.|+.|++||..+++...... +|...|.+++|+|+|++
T Consensus 142 -~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~----------------~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 142 -NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----------------EHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp -CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC----------------CCSSCEEEEEECTTSSE
T ss_pred -eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec----------------cccCceEEEEECCCCCE
Confidence 3568888999999999987 59999999999999988766533322 57889999999999999
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEee-------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------------
Q 017421 242 LVAGSSDDCIYVYDLEANKLSLRIL-------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------------ 302 (372)
Q Consensus 242 l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------------ 302 (372)
|++++.|++|++||+.+++++..+. +|...|.+++|+ |++++|++++.|++|++||+++.
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 9999999999999999999888874 799999999999 99999999999999999998631
Q ss_pred -------------------------------------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 303 -------------------------------------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 303 -------------------------------------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
.+|...|++++|+|+|++|++++ .|++|++||+.+++
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s------~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD------AEGHINSWDISTGI 357 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCC
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe------CCCcEEEEECCCCc
Confidence 25778899999999999999887 79999999999887
Q ss_pred EEEEE
Q 017421 346 TFYSF 350 (372)
Q Consensus 346 ~~~~~ 350 (372)
....+
T Consensus 358 ~~~~~ 362 (611)
T 1nr0_A 358 SNRVF 362 (611)
T ss_dssp EEECS
T ss_pred eeeec
Confidence 65543
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.2e-31 Score=258.13 Aligned_cols=230 Identities=18% Similarity=0.197 Sum_probs=195.9
Q ss_pred ccCCceeEeeeeeCCCC-----CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEE
Q 017421 100 SAADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 174 (372)
.+.|..+++|+...... ...+.+|...|.+++|+|++++|++|+.|++|+|||+.++..... ..+|...|.+
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~---~~~h~~~v~~ 477 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR---FVGHTKDVLS 477 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEE
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE---EeCCCCCEEE
Confidence 56677899998765433 235789999999999999999999999999999999999876654 5678889999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC--CEEEEEeCCCeEE
Q 017421 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG--RELVAGSSDDCIY 252 (372)
Q Consensus 175 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~--~~l~s~s~dg~i~ 252 (372)
++|+|++++|++++.|+.|++||+.......... ...+|...|.+++|+|++ ..|++++.|++|+
T Consensus 478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE-------------GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECS-------------STTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc-------------CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 9999999999999999999999986543222111 012577899999999987 6899999999999
Q ss_pred EEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeee
Q 017421 253 VYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLIL 327 (372)
Q Consensus 253 iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~ 327 (372)
+||+++++....+.+|...|++++|+ |++++|++|+.||.|++||+++.+ .+...|.+++|+|++.+++++
T Consensus 545 vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~--- 620 (694)
T 3dm0_A 545 VWNLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAA--- 620 (694)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEE---
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE---
Confidence 99999999999999999999999999 999999999999999999997432 345679999999999999888
Q ss_pred eEEEeeceEEEeecccceEEEEEeee
Q 017421 328 VISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 328 ~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.++.|++||+.+++.+..+..|
T Consensus 621 ----~~~~i~iwd~~~~~~~~~~~~~ 642 (694)
T 3dm0_A 621 ----TEHGIKIWDLESKSIVEDLKVD 642 (694)
T ss_dssp ----ETTEEEEEETTTTEEEEEECCC
T ss_pred ----cCCCEEEEECCCCCChhhhccc
Confidence 4777999999999888877544
No 34
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-30 Score=231.80 Aligned_cols=242 Identities=11% Similarity=0.071 Sum_probs=194.9
Q ss_pred ccCCceeEeeeeeCCCC----CccccCCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeE------EEEeeeccc
Q 017421 100 SAADCCHMLSRYLPVNG----PWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWK------IQKDILAKS 167 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~------~~~~~~~~~ 167 (372)
.+.+..+++|+...... ...+.+|...|.+++|+| ++++|++++.||.|++||+..+.. .........
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc
Confidence 45567788999876543 334578999999999999 699999999999999999987621 112223557
Q ss_pred CCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---CCEE
Q 017421 168 LRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GREL 242 (372)
Q Consensus 168 ~~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l 242 (372)
|...|.+++|+|+ +++|++++.||.|++||+++++...............+. ..+|...+.+++|+|+ +.++
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP---PANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC---CSSCSCCCEEEEECCCSSSCCEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc---cCCcccceeEEEeccCCCCCcEE
Confidence 8889999999999 999999999999999999988765443332222211111 1256779999999997 8999
Q ss_pred EEEeCCCeEEEEECCCCeE--EEEeecCCCCeEEEEEeCCCC----CEEEEEeCCCeEEEEeccc---------------
Q 017421 243 VAGSSDDCIYVYDLEANKL--SLRILAHTSDVNTVCFGDESG----HLIYSGSDDNLCKVNSVLL--------------- 301 (372)
Q Consensus 243 ~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~----~~l~s~~~dg~i~vwd~~~--------------- 301 (372)
++++.++.+.+|+...++. +..+.+|...|++++|+ |++ ++|++++.||.|++||++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 264 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA-PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSN 264 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC-CCSSCSSEEEEEEETTSCEEEEEEEECC-------------
T ss_pred EEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC-CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccccee
Confidence 9999999998888887764 67777899999999999 777 8999999999999999864
Q ss_pred -------------------------------------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 302 -------------------------------------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 302 -------------------------------------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+..|...|++++|+|++++|++++ .|+.|++|++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 265 MFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAG------DDGKVRLWKATYS 338 (351)
T ss_dssp --------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEE------TTSCEEEEEECTT
T ss_pred ccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEec------CCCcEEEEecCcC
Confidence 235888999999999999999886 7999999999998
Q ss_pred eEEEEEe
Q 017421 345 RTFYSFM 351 (372)
Q Consensus 345 ~~~~~~~ 351 (372)
+.+..+.
T Consensus 339 ~~~~~~~ 345 (351)
T 3f3f_A 339 NEFKCMS 345 (351)
T ss_dssp SCEEEEE
T ss_pred cchhhee
Confidence 7665443
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3e-31 Score=240.83 Aligned_cols=213 Identities=17% Similarity=0.116 Sum_probs=168.6
Q ss_pred cCCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCeEEEEe-eecccCCcceEEEEECCCCCEEEEEeCCCeE
Q 017421 121 DQTTSRAYVSQFSADGSLFVAGFQ------ASQIRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIV 193 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 193 (372)
..|...|++++|+|||++|++|+. |+.|++|+..++...... ....+|...|.+++|+|+++ +++++.||.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 469999999999999999999997 778999998776433221 12346777899999999976 5567889999
Q ss_pred EEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeE
Q 017421 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVN 273 (372)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 273 (372)
++||+.+++......... .+|...|++++|+|++++|++++.|+.|++||+++++++..+.+|...|+
T Consensus 118 ~lWd~~~~~~~~~~~~~~------------~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAK------------YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp EEC--------CCCCEEE------------CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEeeccccceeEEEeecc------------CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 999999887543333221 15778999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCC-CEEEEEeCCCeEEEEeccccc--------CCCCCeeEEEeccCC-CeEEEEeeeeEEEeeceEEEeeccc
Q 017421 274 TVCFGDESG-HLIYSGSDDNLCKVNSVLLLT--------RSINPCNKYLFNPCN-KYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 274 ~~~~sp~~~-~~l~s~~~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~g-~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
+++|+ +++ .++++++.|+.|++||+++.+ .+...+.+++|+|++ .+|+++. .|+.|++||+.+
T Consensus 186 ~v~~s-~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~------~d~~i~~wd~~~ 258 (357)
T 4g56_B 186 CVAAC-PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD------ETGNVSLVNIKN 258 (357)
T ss_dssp EEEEC-TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE------SSSCEEEEESSC
T ss_pred EEEEc-cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee------cccceeEEECCC
Confidence 99999 555 589999999999999997432 456779999999985 5666664 689999999999
Q ss_pred ceEEEEEeee
Q 017421 344 LRTFYSFMVH 353 (372)
Q Consensus 344 ~~~~~~~~~h 353 (372)
++.+..+.+|
T Consensus 259 ~~~~~~~~~~ 268 (357)
T 4g56_B 259 PDSAQTSAVH 268 (357)
T ss_dssp GGGCEEECCC
T ss_pred CcEeEEEecc
Confidence 9998888777
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-31 Score=237.40 Aligned_cols=223 Identities=13% Similarity=0.075 Sum_probs=181.6
Q ss_pred ccCCceeEeeeeeCCC--CCccccCCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.|..+++|+..... ....+.+|...|++++|+| ++++|++|+.|++|+|||+.++... ......+|...|.++
T Consensus 31 gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~-~~~~~~~h~~~V~~v 109 (316)
T 3bg1_A 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE-KSHEHAGHDSSVNSV 109 (316)
T ss_dssp EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC-EEEEECCCSSCCCEE
T ss_pred EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce-EEEEccCCCCceEEE
Confidence 5667789999987653 2356789999999999986 4899999999999999999876321 112356788899999
Q ss_pred EECCC--CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---------------
Q 017421 176 SLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--------------- 238 (372)
Q Consensus 176 ~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--------------- 238 (372)
+|+|+ +.+|++++.|+.|++||++.+......... .+|...|.+++|+|+
T Consensus 110 ~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-------------NAHTIGCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp EECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-------------TSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred EECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-------------ccccCCcceEEEccccCCccccccccccCc
Confidence 99997 789999999999999999876321111111 146778999999997
Q ss_pred --CCEEEEEeCCCeEEEEECCCC---eEEEEeecCCCCeEEEEEeCCCC----CEEEEEeCCCeEEEEeccc--------
Q 017421 239 --GRELVAGSSDDCIYVYDLEAN---KLSLRILAHTSDVNTVCFGDESG----HLIYSGSDDNLCKVNSVLL-------- 301 (372)
Q Consensus 239 --~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~sp~~~----~~l~s~~~dg~i~vwd~~~-------- 301 (372)
+++|++|+.|+.|++||++.. +++..+.+|...|.+++|+ |++ .+|++++.|++|++||++.
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s-p~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~ 255 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA-PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP 255 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC-CCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBC
T ss_pred cccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec-CCCCCCCceEEEEcCCCeEEEEEccCccccchhh
Confidence 468999999999999999755 4667788999999999999 665 8999999999999999864
Q ss_pred --ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 302 --LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 302 --~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
+..|...|.+++|+|+|++|++++ .|++|++|+...
T Consensus 256 ~~~~~~~~~v~~v~~sp~g~~las~~------~D~~v~lw~~~~ 293 (316)
T 3bg1_A 256 KLLHKFNDVVWHVSWSITANILAVSG------GDNKVTLWKESV 293 (316)
T ss_dssp CEEEECSSCEEEEEECTTTCCEEEEE------SSSCEEEEEECT
T ss_pred hhhhcCCCcEEEEEEcCCCCEEEEEc------CCCeEEEEEECC
Confidence 235778999999999999999886 689999998763
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=3.5e-30 Score=234.52 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=172.7
Q ss_pred cCCceeEeeeeeCCCCC---------ccccCCCCceEEEEECCCCCEEEEE--eCCCcEEEEeCCCCeEEEEeeecccCC
Q 017421 101 AADCCHMLSRYLPVNGP---------WPVDQTTSRAYVSQFSADGSLFVAG--FQASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
..+..+++|........ .....+...+.+++|||||++++++ +.|++|+|||+.++..+... .|.
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~ 176 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI----ETR 176 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE----ECS
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe----CCC
Confidence 34556777776554332 1223445678999999999998755 46899999999998766542 355
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC
Q 017421 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (372)
Q Consensus 170 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg 249 (372)
..|.+++|+||++++++++.+ .+.+|+..++........ .+|...|.+++|+|+++++++++.|+
T Consensus 177 ~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~--------------~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 177 GEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTD--------------FDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp SCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECC--------------CCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred CceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeec--------------CCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 679999999999999998855 566777777664322211 14667899999999999999998887
Q ss_pred ----eEEEEECCCCeE----EEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-------ccCCCCCeeEEEe
Q 017421 250 ----CIYVYDLEANKL----SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-------LTRSINPCNKYLF 314 (372)
Q Consensus 250 ----~i~iwd~~~~~~----~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~v~~~~~ 314 (372)
.+++|++..... ...+.+|...|++++|+ |+|++||+|+.|++|+|||+++ +.+|..+|++++|
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~S-pdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVD-MKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEEC-CCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE
Confidence 688999877653 34567899999999999 9999999999999999999873 3479999999999
Q ss_pred ccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 315 NPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 315 s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+|||++|++++ .|++|+||++...
T Consensus 321 Spdg~~laS~S------~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 321 SPDSTYVASVS------AANTIHIIKLPLN 344 (365)
T ss_dssp CTTSCEEEEEE------TTSEEEEEECCTT
T ss_pred CCCCCEEEEEe------CCCeEEEEEcCCC
Confidence 99999999987 7999999998644
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.98 E-value=1.6e-30 Score=250.67 Aligned_cols=211 Identities=20% Similarity=0.234 Sum_probs=179.7
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
...+..+.+|+. .......+.+|...|.+++|+|++++|++++.|+.|++||.. ++.+.. ..+|...|++++|+|
T Consensus 362 ~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~---~~~~~~~v~~~~~s~ 436 (577)
T 2ymu_A 362 ASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT---LTGHSSSVWGVAFSP 436 (577)
T ss_dssp EETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEE---EECCSSCEEEEEECT
T ss_pred EeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEE---ecCCCCCeEEEEECC
Confidence 344556777763 344456678899999999999999999999999999999965 434443 457888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
++++|++++.|+.|++||... +...... +|...|.+++|+|++++|++++.|+.|++||. ++
T Consensus 437 d~~~l~~~~~d~~v~~w~~~~-~~~~~~~----------------~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~ 498 (577)
T 2ymu_A 437 DDQTIASASDDKTVKLWNRNG-QLLQTLT----------------GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 498 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTS-CEEEEEE----------------CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred CCCEEEEEcCCCEEEEEECCC-CEEEEEc----------------CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC
Confidence 999999999999999999754 3222211 46779999999999999999999999999995 57
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cccCCCCCeeEEEeccCCCeEEEEeeeeEEEeec
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LLTRSINPCNKYLFNPCNKYLIIYLILVISIYSP 334 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~ 334 (372)
+++..+.+|...|++++|+ |++++|++++.|+.|++||.. ++.+|...|++++|+|||++|++++ .|+
T Consensus 499 ~~~~~~~~h~~~v~~l~~s-~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~------~D~ 571 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS------SDK 571 (577)
T ss_dssp CEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEE------TTS
T ss_pred CEEEEEeCCCCCEEEEEEc-CCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe------CCC
Confidence 8889999999999999999 999999999999999999964 4568999999999999999999886 688
Q ss_pred eEEEee
Q 017421 335 NILLDN 340 (372)
Q Consensus 335 ~i~lw~ 340 (372)
+|++||
T Consensus 572 ~i~~Wd 577 (577)
T 2ymu_A 572 TVKLWN 577 (577)
T ss_dssp CEEEEC
T ss_pred EEEEeC
Confidence 999997
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.98 E-value=3.1e-29 Score=224.58 Aligned_cols=226 Identities=16% Similarity=0.156 Sum_probs=191.3
Q ss_pred ccCCceeEeeeeeCCCCCcccc-----CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEE
Q 017421 100 SAADCCHMLSRYLPVNGPWPVD-----QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 174 (372)
.+.+..+.+|+.........+. +|...|.+++|+|++++|++++.|+.|++||+.++.... ......|...|.+
T Consensus 68 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~~~i~~ 146 (337)
T 1gxr_A 68 TGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI-KAELTSSAPACYA 146 (337)
T ss_dssp EECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EE-EEEEECSSSCEEE
T ss_pred EcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcce-eeecccCCCceEE
Confidence 3447788888887655433332 799999999999999999999999999999999875322 2234567778999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEE
Q 017421 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (372)
Q Consensus 175 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iw 254 (372)
++|+|+++++++++.||.|++||+++++...... +|...|.+++|+|++++|++++.|+.|++|
T Consensus 147 ~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~----------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 210 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----------------GHTDGASCIDISNDGTKLWTGGLDNTVRSW 210 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee----------------cccCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 9999999999999999999999999887544332 466789999999999999999999999999
Q ss_pred ECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-----ccCCCCCeeEEEeccCCCeEEEEeeeeE
Q 017421 255 DLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-----LTRSINPCNKYLFNPCNKYLIIYLILVI 329 (372)
Q Consensus 255 d~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~v~~~~~s~~g~~l~~~~~~~~ 329 (372)
|+++++.+..+. +...+.+++|+ |++++|++++.|+.|++||++. ...|...|.+++|+|++++|++++
T Consensus 211 d~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 284 (337)
T 1gxr_A 211 DLREGRQLQQHD-FTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG---- 284 (337)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEE----
T ss_pred ECCCCceEeeec-CCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEec----
Confidence 999998887765 77899999999 9999999999999999999974 347889999999999999999886
Q ss_pred EEeeceEEEeecccceEEEEE
Q 017421 330 SIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 330 ~~~d~~i~lw~~~~~~~~~~~ 350 (372)
.|+.+++|++.+++.+...
T Consensus 285 --~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 285 --KDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp --TTSEEEEEETTTCCEEEEE
T ss_pred --CCCcEEEEECCCCeEEEEe
Confidence 6899999999999877543
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.5e-30 Score=233.27 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=186.4
Q ss_pred ccCCceeEeeeeeC--CCCCccccCCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.+..+.+|+... ......+.+|...|++++|+|+ +++|++++.||.|++||+.++... .......|...|.++
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 29 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS-QIAVHAVHSASVNSV 107 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEE
T ss_pred EECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee-EeeeecCCCcceEEE
Confidence 44567788999873 3344567899999999999987 999999999999999999988522 222355678899999
Q ss_pred EECCC--CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-------------CCC
Q 017421 176 SLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-------------DGR 240 (372)
Q Consensus 176 ~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-------------~~~ 240 (372)
+|+|+ +++|++++.|+.|++||+..+......... +|...|.+++|+| ++.
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID--------------AHAIGVNSASWAPATIEEDGEHNGTKESR 173 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE--------------CCTTCEEEEEECCCC----------CTTC
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec--------------CCCCceEEEEEcCccccccccccCCCCCC
Confidence 99999 999999999999999999887543222211 4667999999999 699
Q ss_pred EEEEEeCCCeEEEEECCCCe----EEEEeecCCCCeEEEEEeCCC---CCEEEEEeCCCeEEEEecccc-----------
Q 017421 241 ELVAGSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVNSVLLL----------- 302 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~vwd~~~~----------- 302 (372)
+|++++.|+.|++||++++. ....+.+|...|.+++|+ |+ +++|++++.||.|++||++..
T Consensus 174 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 174 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC-CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecc
Confidence 99999999999999998654 456777899999999999 87 899999999999999998742
Q ss_pred cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 303 TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 303 ~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
..+...|++++|+|+|++|++++ .|+.|++|++..+.
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~------~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSG------GDNKVTLWKENLEG 289 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEE------SSSSEEEEEEEETT
T ss_pred ccCCCcEEEEEEcCCCCEEEEec------CCCcEEEEeCCCCC
Confidence 13778899999999999999886 58999999988654
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=4.4e-30 Score=236.85 Aligned_cols=233 Identities=12% Similarity=0.122 Sum_probs=190.2
Q ss_pred cCCceeEeeeeeCC----CCCccccCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEE----EEeeecccCCcc
Q 017421 101 AADCCHMLSRYLPV----NGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWT 171 (372)
Q Consensus 101 ~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~ 171 (372)
+.+..+.+|+.... .....+.+|.+.|.+++|+| ++++|++|+.||.|+||++.++... .......+|...
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~ 133 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR 133 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence 45667778876443 23445788999999999999 9999999999999999999886321 112235578889
Q ss_pred eEEEEECCCC-CEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 172 VTDTSLSPDQ-RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 172 v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
|.+++|+|++ ++|++++.||.|++||+++++....... .+|...|.+++|+|++++|++++.|+.
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP--------------DVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT--------------TTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec--------------CCCCCceEEEEECCCCCEEEEEecCCc
Confidence 9999999998 6999999999999999998876433310 046679999999999999999999999
Q ss_pred EEEEECCCCeEEEEe-ecCCCC-eEEEEEeCCCCCEEEEE---eCCCeEEEEeccccc--------CCCCCeeEEEeccC
Q 017421 251 IYVYDLEANKLSLRI-LAHTSD-VNTVCFGDESGHLIYSG---SDDNLCKVNSVLLLT--------RSINPCNKYLFNPC 317 (372)
Q Consensus 251 i~iwd~~~~~~~~~~-~~~~~~-v~~~~~sp~~~~~l~s~---~~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~ 317 (372)
|++||+++++.+..+ ..|.+. +.++.|+ +++++|++| +.|+.|++||++... .+...+..++|+|+
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp EEEEETTTTEEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred EEEEeCCCCceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 999999999998888 678776 8999999 899999999 789999999997532 46678999999999
Q ss_pred CCeEEEEeeeeEEEeeceEEEeecccceE-EEEEeee
Q 017421 318 NKYLIIYLILVISIYSPNILLDNYFLLRT-FYSFMVH 353 (372)
Q Consensus 318 g~~l~~~~~~~~~~~d~~i~lw~~~~~~~-~~~~~~h 353 (372)
+++|+++.. .|+.|++|++.+++. +..+..|
T Consensus 279 ~~~l~~~g~-----~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 279 TNIVYLCGK-----GDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp TTEEEEEET-----TCSCEEEEEECSSTTCEEEEEEE
T ss_pred CCEEEEEEc-----CCCeEEEEEecCCCcceEeeccc
Confidence 999975421 489999999998874 4444444
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=5.5e-32 Score=247.08 Aligned_cols=212 Identities=13% Similarity=0.113 Sum_probs=169.7
Q ss_pred ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 017421 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 199 (372)
+..+.++|++++|+|++++|++|+.|+.|+||++.++.. .......+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce-EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 445678999999999999999999999999999988731 1222356788899999999999999999999999999999
Q ss_pred CCc-eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---EEEEeec-CCCCeEE
Q 017421 200 SGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILA-HTSDVNT 274 (372)
Q Consensus 200 ~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~ 274 (372)
++. ....... .+|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+
T Consensus 86 ~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 86 PDGTWKQTLVL--------------LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp ---CCCCEEEC--------------CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CCCceeeeeEe--------------cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 876 1111111 1467799999999999999999999999999999887 3677777 9999999
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeccccc-----------------------CCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVLLLT-----------------------RSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----------------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
++|+ |++++|++++.|+.|++||++... .|...|.+++|+|+|++|++++
T Consensus 152 ~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~------ 224 (377)
T 3dwl_C 152 LDWH-PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG------ 224 (377)
T ss_dssp EEEC-TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE------
T ss_pred EEEc-CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe------
Confidence 9999 899999999999999999984110 6788899999999999999886
Q ss_pred eeceEEEeecccceE----EEEEeee
Q 017421 332 YSPNILLDNYFLLRT----FYSFMVH 353 (372)
Q Consensus 332 ~d~~i~lw~~~~~~~----~~~~~~h 353 (372)
.|+.|++||+.+++. +..+.+|
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 225 HDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp TTTEEC-CEECSTTSCEEECCCEECS
T ss_pred CCCcEEEEECCCCCCcceeeEeecCC
Confidence 689999999999876 6666655
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=4.7e-30 Score=234.92 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=182.2
Q ss_pred cccCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC-CCCEEEEEeCCCeEEEE
Q 017421 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 196 (372)
.+.+|...|++++|+|++ ++|++|+.||.|+|||+.++..... ....+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF-IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 457899999999999999 9999999999999999997755433 22346888999999999 78999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
|+.+........ + .+|...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++
T Consensus 147 d~~~~~~~~~~~----~----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 147 DFSGSVIQVFAK----T----------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp ETTSCEEEEEEC----C----------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEE
T ss_pred ECCCCceEEEec----c----------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEE
Confidence 998643322111 0 134568999999999999999999999999999 5778888999999999999
Q ss_pred EeCCCCC-EEEEEeCCCeEEEEeccccc---------CCCCCeeEEEecc-CCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 277 FGDESGH-LIYSGSDDNLCKVNSVLLLT---------RSINPCNKYLFNP-CNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 277 ~sp~~~~-~l~s~~~dg~i~vwd~~~~~---------~~~~~v~~~~~s~-~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
|+ |+++ +|++++.|+.|++||++... .|...|.+++|+| ++++|++++ .|+.|++||+.+++
T Consensus 212 ~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~------~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 212 FN-PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD------QRNEIRVYSSYDWS 284 (383)
T ss_dssp EC-SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE------SSSEEEEEETTBTT
T ss_pred EC-CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc------CCCcEEEEECCCCc
Confidence 99 8887 99999999999999998521 5788999999999 999999886 68999999999998
Q ss_pred EEEEEeeeE
Q 017421 346 TFYSFMVHI 354 (372)
Q Consensus 346 ~~~~~~~h~ 354 (372)
.+..+.+|.
T Consensus 285 ~~~~~~~~~ 293 (383)
T 3ei3_B 285 KPDQIIIHP 293 (383)
T ss_dssp SCSEEEECC
T ss_pred ccccccccc
Confidence 888887764
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.2e-29 Score=244.49 Aligned_cols=241 Identities=19% Similarity=0.236 Sum_probs=194.8
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+. .......+.+|...|.+++|+|++++|++++.|+.|++|++.... +.. ...|...+.+++|+|
T Consensus 280 ~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~---~~~~~~~v~~~~~s~ 354 (577)
T 2ymu_A 280 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQT---LTGHSSSVWGVAFSP 354 (577)
T ss_dssp EETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEE---ECCCSSCEEEEEECT
T ss_pred EeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEE---EeCCCCCEEEEEECC
Confidence 445566777763 334445678899999999999999999999999999999987653 332 457778899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCC------------------------CCccccEEEEEE
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD------------------------GGYSFGIFSLKF 235 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~h~~~i~~~~~ 235 (372)
++++|++++.|+.|++||..................+.|+++.. .+|...|.+++|
T Consensus 355 ~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 355 DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEE
Confidence 99999999999999999965432221111111122233333211 358889999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cccCCCCCee
Q 017421 236 STDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LLTRSINPCN 310 (372)
Q Consensus 236 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~ 310 (372)
+|++++|++++.|+.|++||.. ++.+..+.+|...|++++|+ |++++|++++.|+.|++||.. .+..|...|+
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~s-pd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR 512 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEEC-TTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEE
T ss_pred CCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEE
Confidence 9999999999999999999974 67778889999999999999 999999999999999999965 4558999999
Q ss_pred EEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
+++|+|+|++|++++ .|+.|++||+ +++.+..+.+|.
T Consensus 513 ~l~~s~dg~~l~s~~------~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 513 GVAFSPDGQTIASAS------DDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EEEECTTSSCEEEEE------TTSEEEEECT-TSCEEEEEECCS
T ss_pred EEEEcCCCCEEEEEE------CcCEEEEEeC-CCCEEEEEcCCC
Confidence 999999999999886 6899999995 688888898883
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=228.54 Aligned_cols=233 Identities=14% Similarity=0.118 Sum_probs=190.7
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|...|.+++|+|++++|++++.||.|+|||+.++..+.. ...|...|.+++|+|++++|++++.||.|++|
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT---LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh---hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 345789999999999999999999999999999999998876655 56788899999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCC-----------------------------------------CCccc--cEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADD-----------------------------------------GGYSF--GIFSL 233 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~h~~--~i~~~ 233 (372)
|+.+++.............+.+.+... .+|.. .+.++
T Consensus 102 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 102 DVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred ECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 999887655543222222222222110 01222 89999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCC
Q 017421 234 KFSTDGRELVAGSSDDCIYVYDLEA-NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSIN 307 (372)
Q Consensus 234 ~~sp~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~ 307 (372)
+|+|++++|++++.||.|++||+++ ++.+..+..|...|.+++|+ |++++|++++.|+.|++||+++.. .+..
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 260 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC 260 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCCCceeeeecCCC
Confidence 9999999999999999999999998 78888999999999999999 899999999999999999998533 4678
Q ss_pred CeeEEEeccCCCeEEEEeeee-EEEee-------ceEEEeecccceEEEEEeee
Q 017421 308 PCNKYLFNPCNKYLIIYLILV-ISIYS-------PNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 308 ~v~~~~~s~~g~~l~~~~~~~-~~~~d-------~~i~lw~~~~~~~~~~~~~h 353 (372)
.+..++|+|++++++++.... ..++. ..+++||..+++.+..+.+|
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 314 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH 314 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc
Confidence 899999999999999885221 11111 17999999999999988887
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=3.4e-30 Score=238.54 Aligned_cols=226 Identities=15% Similarity=0.183 Sum_probs=187.3
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+..| ..+....|+|++++|++|+.||.|++||+.++..... ...|...|.+++|+|
T Consensus 74 ~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~h~~~v~~~~~~~ 149 (420)
T 3vl1_A 74 ARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI---DQAHVSEITKLKFFP 149 (420)
T ss_dssp EEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE---TTSSSSCEEEEEECT
T ss_pred EEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee---cccccCccEEEEECC
Confidence 445667888887766666666666 5556668899999999999999999999998755443 568888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
++++|++++.|+.|++||+.+++...... +|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 150 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 150 SGEALISSSQDMQLKIWSVKDGSNPRTLI----------------GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCCCEEEE----------------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CCCEEEEEeCCCeEEEEeCCCCcCceEEc----------------CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 99999999999999999999887543332 47779999999999999999999999999999999
Q ss_pred eEEEEeec---CCCCeEEEEE---------------------eCCCCCEEEEEeCCCeEEEEecccc-------cCCCCC
Q 017421 260 KLSLRILA---HTSDVNTVCF---------------------GDESGHLIYSGSDDNLCKVNSVLLL-------TRSINP 308 (372)
Q Consensus 260 ~~~~~~~~---~~~~v~~~~~---------------------sp~~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~ 308 (372)
+.+..+.. |...|.+++| + |++++|++++.||.|++||+++. ..|...
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG-TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS-CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc-CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 99888874 4445555554 6 78999999999999999999743 257889
Q ss_pred eeEEEeccCCC-eEEEEeeeeEEEeeceEEEeecccceE-EEEEee
Q 017421 309 CNKYLFNPCNK-YLIIYLILVISIYSPNILLDNYFLLRT-FYSFMV 352 (372)
Q Consensus 309 v~~~~~s~~g~-~l~~~~~~~~~~~d~~i~lw~~~~~~~-~~~~~~ 352 (372)
|.+++|+|+++ +|++++ .|+.|++||+.+++. +..+.+
T Consensus 293 v~~~~~~~~~~~~l~~g~------~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGY------ENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp EEEEEECSSCTTEEEEEE------TTSEEEEEETTCTTSCSEEEEE
T ss_pred ceeEEEeCCCCCEEEEEe------CCCeEEEEEcCCCcCchhhhhc
Confidence 99999999998 888775 689999999988754 666655
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=8.3e-31 Score=239.29 Aligned_cols=222 Identities=14% Similarity=0.082 Sum_probs=173.5
Q ss_pred ccCCceeEeeeeeCC--CCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421 100 SAADCCHMLSRYLPV--NGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (372)
.+.+..+.+|+.... .....+.+|...|.+++|+|++++|++++.|+.|++||+.++...........|...|.+++|
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 345677889998876 566778899999999999999999999999999999999987522223335678889999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 017421 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (372)
Q Consensus 178 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~ 257 (372)
+|++++|++++.|+.|++||++++........... .|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR------------PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC-----CCCCEEECS------------SCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred CCCCCEEEEEecCCeEEEEEECCcccceeeeEeec------------ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 99999999999999999999988763111111110 266799999999999999999999999999985
Q ss_pred ------------------CCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc----------ccCCCCCe
Q 017421 258 ------------------ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL----------LTRSINPC 309 (372)
Q Consensus 258 ------------------~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~v 309 (372)
.++++..+ .|...|.+++|+ |++++|++++.|+.|++||++. +..|..+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 177 VRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-PSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL 254 (377)
T ss_dssp CSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-TTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE
T ss_pred ecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce
Confidence 35566666 899999999999 9999999999999999999863 33678899
Q ss_pred eEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 310 NKYLFNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 310 ~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
.+++|+|+|++|+++. +..+.+|+..
T Consensus 255 ~~~~~s~~~~~l~~~~-------~~~~~~~~~~ 280 (377)
T 3dwl_C 255 RSLLWANESAIVAAGY-------NYSPILLQGN 280 (377)
T ss_dssp EEEEEEETTEEEEEES-------SSSEEEECCC
T ss_pred EEEEEcCCCCEEEEEc-------CCcEEEEEeC
Confidence 9999999999999885 4444455544
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=234.04 Aligned_cols=234 Identities=15% Similarity=0.147 Sum_probs=187.9
Q ss_pred ccCCceeEeeee----eCCC------CCccccC----------CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEE
Q 017421 100 SAADCCHMLSRY----LPVN------GPWPVDQ----------TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI 159 (372)
Q Consensus 100 ~~~~~~~~~~~~----~~~~------~~~~~~~----------~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 159 (372)
.+.+..+.+|+. .... ....+.. |...|.+++|+|++++|++++.||.|++|+ .++..+
T Consensus 64 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~ 142 (425)
T 1r5m_A 64 GEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALL 142 (425)
T ss_dssp EETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEE
T ss_pred ecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCee
Confidence 455677888988 5444 1222222 688999999999999999999999999999 444444
Q ss_pred EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeec----------------ccccceeccC-
Q 017421 160 QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI----------------HDGLDFSAAD- 222 (372)
Q Consensus 160 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----------------~~~~~~~~~~- 222 (372)
.. ...|...|.+++|+|++++|++++.|+.|++||+.+++.......... ...+.+.+..
T Consensus 143 ~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (425)
T 1r5m_A 143 NV---LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK 219 (425)
T ss_dssp EE---ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE
T ss_pred ee---ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE
Confidence 43 557888999999999999999999999999999998876544332211 1112222110
Q ss_pred -----------------------CCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeC
Q 017421 223 -----------------------DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (372)
Q Consensus 223 -----------------------~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 279 (372)
..+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~- 298 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV- 298 (425)
T ss_dssp EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE-
T ss_pred EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC-
Confidence 12578899999999999999999999999999999999989999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 280 ESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 280 ~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
|++ ++++++.|+.|++||++. +..|...|.+++|+|++++|++++ .|+.|++||+.+++
T Consensus 299 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 299 GDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF------MDGQVNVYDLKKLN 363 (425)
T ss_dssp TTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE------TTSCEEEEECHHHH
T ss_pred CCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE------CCCeEEEEECCCCc
Confidence 788 999999999999999873 346788999999999999999886 68999999999988
No 49
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5e-31 Score=235.40 Aligned_cols=203 Identities=18% Similarity=0.100 Sum_probs=164.3
Q ss_pred cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC--CCCEEEEEeCCCeEEEE
Q 017421 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVHIV 196 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~vw 196 (372)
.+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++.... ...+.+|..+|.+++|+| ++++|++++.|+.|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~-~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEE-EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEE-EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 457899999999999999999999999999999998774321 223568999999999986 48999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCeE---EEEeecCCCC
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANKL---SLRILAHTSD 271 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~ 271 (372)
|++++........ .+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+.+|...
T Consensus 87 d~~~~~~~~~~~~--------------~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 87 REENGTWEKSHEH--------------AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp CCSSSCCCEEEEE--------------CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred ECCCCcceEEEEc--------------cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC
Confidence 9987643222111 157779999999998 78999999999999999987632 3445679999
Q ss_pred eEEEEEeCCC-----------------CCEEEEEeCCCeEEEEeccc---------ccCCCCCeeEEEeccCC----CeE
Q 017421 272 VNTVCFGDES-----------------GHLIYSGSDDNLCKVNSVLL---------LTRSINPCNKYLFNPCN----KYL 321 (372)
Q Consensus 272 v~~~~~sp~~-----------------~~~l~s~~~dg~i~vwd~~~---------~~~~~~~v~~~~~s~~g----~~l 321 (372)
|.+++|+ |+ +++|++|+.|+.|++||++. +..|...|.+++|+|++ ++|
T Consensus 153 v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 153 CNAVSWA-PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp BCCCEEC-CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred cceEEEc-cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 9999999 55 47899999999999999852 34788999999999997 778
Q ss_pred EEEeeeeEEEeeceEEEeeccc
Q 017421 322 IIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
++++ .|++|++|++.+
T Consensus 232 as~s------~D~~v~iw~~~~ 247 (316)
T 3bg1_A 232 ASCS------QDGRVFIWTCDD 247 (316)
T ss_dssp EEEE------TTCEEEEEECSS
T ss_pred EEEc------CCCeEEEEEccC
Confidence 8876 789999998876
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.3e-29 Score=230.49 Aligned_cols=223 Identities=12% Similarity=0.061 Sum_probs=189.2
Q ss_pred ccCCceeEeeeeeCCC--CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421 100 SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (372)
.+.+..+.+|+..... ....+.+|...|.+++|+|++++|++++.||.|++||+.++..... .....|...|.+++|
T Consensus 26 ~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 26 CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT-LVILRINRAARCVRW 104 (372)
T ss_dssp ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE-EECCCCSSCEEEEEE
T ss_pred EeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee-EEeecCCCceeEEEE
Confidence 4456788899887765 6677889999999999999999999999999999999988754333 234567788999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEEC-
Q 017421 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL- 256 (372)
Q Consensus 178 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~- 256 (372)
+|++++|++++.|+.|++||++.+.......... .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIK------------KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC------------TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee------------cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 9999999999999999999998876321111111 146679999999999999999999999999995
Q ss_pred -----------------CCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEE
Q 017421 257 -----------------EANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYL 313 (372)
Q Consensus 257 -----------------~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~ 313 (372)
..++.+..+..|...|.+++|+ |++++|++++.|+.|++||+++ +..|..+|.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 251 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVT 251 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEE
T ss_pred cccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEE
Confidence 4678888888999999999999 8999999999999999999973 347888999999
Q ss_pred eccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 314 FNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 314 ~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
|+|++++++++ .|+.|++|++.+
T Consensus 252 ~~~~~~~l~~~-------~d~~i~i~~~~~ 274 (372)
T 1k8k_C 252 FITESSLVAAG-------HDCFPVLFTYDS 274 (372)
T ss_dssp EEETTEEEEEE-------TTSSCEEEEEET
T ss_pred EecCCCEEEEE-------eCCeEEEEEccC
Confidence 99999999888 588888898877
No 51
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=5.4e-29 Score=223.57 Aligned_cols=227 Identities=16% Similarity=0.135 Sum_probs=181.7
Q ss_pred cccCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCeEE--EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421 119 PVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 195 (372)
.+.+|.+.|++++|+|+ +++|++|+.|++|+|||+.+.... .......+|...|.++.|+|++++|++++.|+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 47899999999999997 689999999999999999765321 122335688889999999999999999999999999
Q ss_pred EECCCCceeeecceeecc---------cccceec------------------cCCCCccccEEEEEEcCCC--CEEEEEe
Q 017421 196 VDVGSGTMESLANVTEIH---------DGLDFSA------------------ADDGGYSFGIFSLKFSTDG--RELVAGS 246 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~---------~~~~~~~------------------~~~~~h~~~i~~~~~sp~~--~~l~s~s 246 (372)
|+................ ....... ....+|...+..++|++++ .++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 999876643322111000 0000000 0124688899999999875 5788999
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeE
Q 017421 247 SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYL 321 (372)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l 321 (372)
.|+.|++||+++++.+..+.+|...|++++|+ |++++|++|+.|+.|++||++... .+...|..+.|+|++.++
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL 271 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee
Confidence 99999999999999999999999999999999 999999999999999999998533 455689999999998888
Q ss_pred EEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 322 IIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+++ .|+.|++||+.++..+..+..+
T Consensus 272 ~~~-------~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 272 CAA-------TGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp EEE-------ETTEEEEEETTTTEEEEEECCC
T ss_pred ecc-------CCCEEEEEECCCCeEEEecccc
Confidence 777 5888999999888777766543
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.1e-29 Score=230.93 Aligned_cols=211 Identities=12% Similarity=0.100 Sum_probs=180.2
Q ss_pred cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCe--EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW--KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
.+..|..+|++++|+|++++|++++.|+.|++||+.++. .+.. ..+|...|.+++|+|++++|++++.||.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE---LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE---EECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeee---ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 345689999999999999999999999999999999875 3333 45788899999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE---EEE-eecCCCCe
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL---SLR-ILAHTSDV 272 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~---~~~-~~~~~~~v 272 (372)
|+.+++........ +|...|.+++|+|++++|++++.|+.|++||++.+.. ... ...|...|
T Consensus 80 d~~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i 145 (372)
T 1k8k_C 80 TLKGRTWKPTLVIL--------------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV 145 (372)
T ss_dssp EEETTEEEEEEECC--------------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCE
T ss_pred ECCCCeeeeeEEee--------------cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCe
Confidence 99887643332211 3667899999999999999999999999999987752 233 35688999
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEecc------------------------cccCCCCCeeEEEeccCCCeEEEEeeee
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVL------------------------LLTRSINPCNKYLFNPCNKYLIIYLILV 328 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~------------------------~~~~~~~~v~~~~~s~~g~~l~~~~~~~ 328 (372)
.+++|+ |++++|++++.|+.|++||++ .+..|...|.+++|+|++++|++++
T Consensus 146 ~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--- 221 (372)
T 1k8k_C 146 LSLDWH-PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS--- 221 (372)
T ss_dssp EEEEEC-TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE---
T ss_pred eEEEEc-CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe---
Confidence 999999 899999999999999999953 2336788999999999999999886
Q ss_pred EEEeeceEEEeecccceEEEEEeee
Q 017421 329 ISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 329 ~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|+.|++||+.+++.+..+.+|
T Consensus 222 ---~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 222 ---HDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp ---TTTEEEEEEGGGTTEEEEEECS
T ss_pred ---CCCEEEEEECCCCceeEEEccC
Confidence 6899999999999998888776
No 53
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.1e-28 Score=221.56 Aligned_cols=251 Identities=14% Similarity=0.144 Sum_probs=192.1
Q ss_pred eeeeecccCc-----cCCC-Cc-c--ccCCceeEeeeeeCCCC-----CccccCCCCceEEEEECCCCCEEEEEeCCCcE
Q 017421 83 VKMLAGREGN-----YSGR-GR-F--SAADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQI 148 (372)
Q Consensus 83 ~~~~~~~~~~-----~~~~-~~-~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 148 (372)
...|+||... +++. +. + .+.|..+++|++..... ...+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3456677663 4443 22 2 55678899999876543 23568899999999999999999999999999
Q ss_pred EEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeccee--eccccccee-------
Q 017421 149 RIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVT--EIHDGLDFS------- 219 (372)
Q Consensus 149 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~------- 219 (372)
++|+......... ...+...+..+.+++++++|++++.|+.+++||+............ .....+.+.
T Consensus 111 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 111 RLWDLTTGTTTRR---FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEETTTTEEEEE---EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred eEEeecccceeee---ecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 9999998865554 3345557889999999999999999999999998765432211100 000001111
Q ss_pred ---ccC-----------------CCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeC
Q 017421 220 ---AAD-----------------DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (372)
Q Consensus 220 ---~~~-----------------~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 279 (372)
... ..+|...|++++|+|++++|++|+.|+.|++||+++.+++..+.. ...|.+++|+
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~- 265 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFS- 265 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEEC-
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecC-
Confidence 111 146889999999999999999999999999999999999888874 4689999999
Q ss_pred CCCCEEEEEeCCCeEEEEeccc---------------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 280 ESGHLIYSGSDDNLCKVNSVLL---------------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 280 ~~~~~l~s~~~dg~i~vwd~~~---------------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
|++.++ +++.|+.|++||++. ...|...|++++|+|+|++|++++ .|+.|++||+.+|
T Consensus 266 ~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs------~Dg~v~iW~~~tG 338 (340)
T 4aow_A 266 PNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY------TDNLVRVWQVTIG 338 (340)
T ss_dssp SSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE------TTSCEEEEEEEC-
T ss_pred CCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe------CCCEEEEEeCCCc
Confidence 777655 556799999999862 125788999999999999999886 6999999999998
Q ss_pred e
Q 017421 345 R 345 (372)
Q Consensus 345 ~ 345 (372)
+
T Consensus 339 t 339 (340)
T 4aow_A 339 T 339 (340)
T ss_dssp -
T ss_pred C
Confidence 6
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.3e-29 Score=227.04 Aligned_cols=209 Identities=15% Similarity=0.150 Sum_probs=176.7
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeee--cccCCcceEEEEECCCCCEEEEEeCCCeEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL--AKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 194 (372)
.....+|...|.+++|+|++++|++++ ||.|++|++.++........ ...|...|.+++|+|++++|++++.|+.|+
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 344568999999999999999999998 99999999987643322222 236778899999999999999999999999
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEE
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 274 (372)
+||+.+++........ +|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+
T Consensus 123 ~~d~~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~ 188 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT--------------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 188 (337)
T ss_dssp EEECCCC--EEEEEEE--------------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEECCCCCcceeeecc--------------cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEE
Confidence 9999987632222211 35668999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
++|+ |++++|++++.|+.|++||++... .+...+.+++|+|++++++++. .|+.+++||+.+++..
T Consensus 189 ~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 189 IDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM------ESSNVEVLHVNKPDKY 259 (337)
T ss_dssp EEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTSSCEE
T ss_pred EEEC-CCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEc------CCCcEEEEECCCCCeE
Confidence 9999 899999999999999999997433 5678899999999999999885 5788999999887653
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.4e-29 Score=249.77 Aligned_cols=212 Identities=18% Similarity=0.142 Sum_probs=179.2
Q ss_pred cccCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEE--EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 195 (372)
.+.+|.+.|++++|+|++ ++|++|+.|++|++|++...... .......+|...|.+++|+|++++|++|+.||.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 467999999999999864 79999999999999999764211 112235688889999999999999999999999999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe---ecCCCCe
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI---LAHTSDV 272 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~v 272 (372)
||+.++....... +|...|.+++|+|++++|++++.|++|++||+......... .+|...|
T Consensus 457 wd~~~~~~~~~~~----------------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 457 WDLAAGVSTRRFV----------------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EETTTTEEEEEEE----------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred EECCCCcceeEEe----------------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 9999887644332 57789999999999999999999999999998765443332 3688899
Q ss_pred EEEEEeCCCC--CEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 273 NTVCFGDESG--HLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 273 ~~~~~sp~~~--~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
.+++|+ |++ ..|++++.|+.|++||++. +..|...|++++|+|+|++|++++ .|+.|++||+.++
T Consensus 521 ~~~~~~-~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~------~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 521 SCVRFS-PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG------KDGVVLLWDLAEG 593 (694)
T ss_dssp EEEEEC-SCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSBCEEEETTTT
T ss_pred EEEEEe-CCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe------CCCeEEEEECCCC
Confidence 999999 665 6899999999999999873 457999999999999999999886 6999999999999
Q ss_pred eEEEEEeee
Q 017421 345 RTFYSFMVH 353 (372)
Q Consensus 345 ~~~~~~~~h 353 (372)
+.+..+..+
T Consensus 594 ~~~~~~~~~ 602 (694)
T 3dm0_A 594 KKLYSLEAN 602 (694)
T ss_dssp EEEECCBCS
T ss_pred ceEEEecCC
Confidence 988776544
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=3.1e-30 Score=233.80 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=189.2
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
.+.+..+.+|+.........+.+|...|.+++|+| ++++|++++.||.|++||+.++..+........|...|.+++|+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 45566788888877777777889999999999999 99999999999999999999987766543346788899999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceec-----------------cCCCCccccEEEEEEcCCCCE
Q 017421 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSA-----------------ADDGGYSFGIFSLKFSTDGRE 241 (372)
Q Consensus 179 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~h~~~i~~~~~sp~~~~ 241 (372)
|++++|++++.||.|++||+++++....... ...+.+ ....+|...|.+++|+ +++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKE-----SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHH-----HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccce-----eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 9999999999999999999988764322211 000000 0112477899999999 779
Q ss_pred EEEEeCCCeEEEEECCCCe--------------EEEEeecCCCCeEEEEEeCCC--CCEEEEEeCCCeEEEEeccc----
Q 017421 242 LVAGSSDDCIYVYDLEANK--------------LSLRILAHTSDVNTVCFGDES--GHLIYSGSDDNLCKVNSVLL---- 301 (372)
Q Consensus 242 l~s~s~dg~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~sp~~--~~~l~s~~~dg~i~vwd~~~---- 301 (372)
|++++.|+.|++||+.++. .+..+..|...|++++|+ |+ +++|++++.||.|++||++.
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS-MDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE-ECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc-CCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 9999999999999998764 377788899999999999 88 99999999999999999974
Q ss_pred ------ccCC--CCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 302 ------LTRS--INPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 302 ------~~~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
+..| ...|++++|+|++++|++++ .|+.|++||+.+
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------~dg~i~iwd~~~ 366 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC------DDASIWRWDRLR 366 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTSSEEEEEE------TTSEEEEEEC--
T ss_pred cccceEEcccccCCceEEEEeCCCCCeEEEEe------CCCEEEEEEecC
Confidence 2344 68999999999999999886 689999999753
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=230.27 Aligned_cols=208 Identities=17% Similarity=0.111 Sum_probs=174.5
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC--CCEEEEEeCCCeEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVH 194 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 194 (372)
...+.+|...|.+++|+|++++|++|+.||.|+||++..... .......+|...|++++|+|+ +++|++++.||.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 356789999999999999999999999999999999985422 222235678889999999987 99999999999999
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe--EEEEeecCCC
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTS 270 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~ 270 (372)
+||+.+++........ +|...|.+++|+|+ +++|++++.|+.|++||++++. ....+..|..
T Consensus 83 iwd~~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHA--------------VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp EEEEETTEEEEEEEEC--------------CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred EEEcCCCceeEeeeec--------------CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 9999988632222211 46679999999999 9999999999999999998873 4456678999
Q ss_pred CeEEEEEeCC------------CCCEEEEEeCCCeEEEEeccc----------ccCCCCCeeEEEeccC---CCeEEEEe
Q 017421 271 DVNTVCFGDE------------SGHLIYSGSDDNLCKVNSVLL----------LTRSINPCNKYLFNPC---NKYLIIYL 325 (372)
Q Consensus 271 ~v~~~~~sp~------------~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~v~~~~~s~~---g~~l~~~~ 325 (372)
.|.+++|+|. ++.+|++++.|+.|++||++. +..|...|.+++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9999999932 799999999999999999863 3368899999999999 88898886
Q ss_pred eeeEEEeeceEEEeecccce
Q 017421 326 ILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 326 ~~~~~~~d~~i~lw~~~~~~ 345 (372)
.|+.|++||+.++.
T Consensus 229 ------~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 ------QDRTCIIWTQDNEQ 242 (379)
T ss_dssp ------TTSCEEEEEESSTT
T ss_pred ------CCCEEEEEeCCCCC
Confidence 68899999988763
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.9e-30 Score=244.79 Aligned_cols=221 Identities=7% Similarity=0.009 Sum_probs=175.6
Q ss_pred ccCCceeEeeeeeCCCCC----ccccCCCCceEEEEECCC------CCEEEEEeCCCcEEEEeCCCCeEE--------EE
Q 017421 100 SAADCCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSAD------GSLFVAGFQASQIRIYDVERGWKI--------QK 161 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~vwd~~~~~~~--------~~ 161 (372)
.+.|..+++|++...... ..+.+|.+.|++++|+|+ +.+||+++.||+|+|||+..+... ..
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 345567889998765532 235678899999999997 579999999999999999865321 01
Q ss_pred eeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEE--EEcCCC
Q 017421 162 DILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL--KFSTDG 239 (372)
Q Consensus 162 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~--~~sp~~ 239 (372)
.....+|...|++++|+++ ..|++|+.||.|++||++++..... ... +|...|+++ .|+|++
T Consensus 259 ~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~--~~~-------------~H~~~V~sv~~~~s~~g 322 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSF--YDQ-------------VHDSYILSVSTAYSDFE 322 (524)
T ss_dssp SEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSE--EEE-------------CSSSCEEEEEEECCTTS
T ss_pred eEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceE--Eee-------------cccccEEEEEEEcCCCC
Confidence 1234577889999999986 4899999999999999987642111 111 577899999 578888
Q ss_pred -CEEEEEeCCCeEEEEECCCCeEEEEeecCCC--CeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCee
Q 017421 240 -RELVAGSSDDCIYVYDLEANKLSLRILAHTS--DVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCN 310 (372)
Q Consensus 240 -~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~ 310 (372)
++|++++.|++|+|||++++++...+.+|.. .|.+++|+ |+++.|++++.|++|++||++. +.+|...|+
T Consensus 323 ~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~ 401 (524)
T 2j04_B 323 DTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTIT 401 (524)
T ss_dssp CCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEE
T ss_pred CeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC-CCcCeEEEeCCCCcEEEEECcccccceeeecCCCceE
Confidence 8999999999999999999887777766653 58899999 8999999999999999999874 347999999
Q ss_pred EEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
+++|+|+|++|++++ .|++|++||...
T Consensus 402 sva~Sp~g~~l~Sgs------~Dgtv~lwd~~~ 428 (524)
T 2j04_B 402 AIGVSRLHPMVLAGS------ADGSLIITNAAR 428 (524)
T ss_dssp EEECCSSCCBCEEEE------TTTEEECCBSCS
T ss_pred EEEeCCCCCeEEEEE------CCCEEEEEechH
Confidence 999999999999886 677888887643
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=233.45 Aligned_cols=218 Identities=14% Similarity=0.146 Sum_probs=181.1
Q ss_pred ccccCCceeEeeeeeCCCCCccccCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeee----------cc
Q 017421 98 RFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDIL----------AK 166 (372)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----------~~ 166 (372)
++...+....+|.+........+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++........ ..
T Consensus 17 ~~~~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
T 4a11_B 17 RLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPD 96 (408)
T ss_dssp HHHHHHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTT
T ss_pred ceeeccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccc
Confidence 3444555667777777777778889999999999999 999999999999999999987643322111 12
Q ss_pred cCCcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---CCEE
Q 017421 167 SLRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GREL 242 (372)
Q Consensus 167 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l 242 (372)
+|...|.+++|+| ++++|++++.||.|++||+.+++...... +...+.++.|+|. +.++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 159 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-----------------FEETVYSHHMSPVSTKHCLV 159 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEEEEEECSSCSSCCEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-----------------CCCceeeeEeecCCCCCcEE
Confidence 4888999999999 78899999999999999999887654433 2347889999885 4599
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEecccc-------------------
Q 017421 243 VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLLL------------------- 302 (372)
Q Consensus 243 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~~------------------- 302 (372)
++++.|+.|++||+++++.+..+..|...|.+++|+ |++. +|++++.||.|++||++..
T Consensus 160 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 160 AVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp EEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred EEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 999999999999999999999999999999999999 7777 6999999999999999643
Q ss_pred ---cCCCCCeeEEEeccCCCeEEEEe-eeeEEEee
Q 017421 303 ---TRSINPCNKYLFNPCNKYLIIYL-ILVISIYS 333 (372)
Q Consensus 303 ---~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~d 333 (372)
..|...|.+++|+|++++|++++ ++.+.+||
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 36788999999999999998875 55666665
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=231.99 Aligned_cols=237 Identities=11% Similarity=0.095 Sum_probs=193.2
Q ss_pred cCCceeEeeeeeCCC--CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC----CeEEEEeeecccCCcceEE
Q 017421 101 AADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER----GWKIQKDILAKSLRWTVTD 174 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~v~~ 174 (372)
+.+..+.+|+..... .+.....|...|.+++|+|++++|++++.||.|++|++.. ...+. ...+|...|.+
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~---~~~~h~~~v~~ 118 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMA---RFSNHSSSVKT 118 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEE---ECCCSSSCCCE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchh---hccCCccceEE
Confidence 456678888877654 2344456899999999999999999999999999999987 22333 35678889999
Q ss_pred EEECCC-CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEE
Q 017421 175 TSLSPD-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIY 252 (372)
Q Consensus 175 ~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~ 252 (372)
++|+|+ +++|++++.|+.|++||+.++......... +......+|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 119 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~ 191 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP-------LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFAS 191 (416)
T ss_dssp EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC-------BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEE
T ss_pred EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc-------cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEE
Confidence 999998 899999999999999999887621000000 000001247779999999999 78999999999999
Q ss_pred EEECCCCeEEEEeecC------CCCeEEEEEeCCCC-CEEEEEeCCC---eEEEEeccc-------cc-CCCCCeeEEEe
Q 017421 253 VYDLEANKLSLRILAH------TSDVNTVCFGDESG-HLIYSGSDDN---LCKVNSVLL-------LT-RSINPCNKYLF 314 (372)
Q Consensus 253 iwd~~~~~~~~~~~~~------~~~v~~~~~sp~~~-~~l~s~~~dg---~i~vwd~~~-------~~-~~~~~v~~~~~ 314 (372)
+||+++++.+..+..+ ...|.+++|+ |++ .+|++++.|+ .|++||++. +. .|...|.+++|
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~ 270 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH-PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDW 270 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEEC-SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEE
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEEC-CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEe
Confidence 9999999998888876 7899999999 665 7999999998 999999974 23 68889999999
Q ss_pred cc-CCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 315 NP-CNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 315 s~-~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
+| ++++|++++ .|+.|++||+.+++.+..+.+|.
T Consensus 271 s~~~~~~l~s~~------~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 271 CHQDEHLLLSSG------RDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp CSSCSSCEEEEE------SSSEEEEECSSSCCEEEEEECSS
T ss_pred CCCCCCeEEEEe------CCCCEEEeeCCCCccceeecCCC
Confidence 99 899999886 68999999999999999888763
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.2e-30 Score=238.96 Aligned_cols=182 Identities=14% Similarity=0.122 Sum_probs=148.4
Q ss_pred ccCCceeEeeeeeCCCCCc--cccCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEE
Q 017421 100 SAADCCHMLSRYLPVNGPW--PVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (372)
.+.|..+++|++....... .+.+|.+.|++++|+| ++++|++|+.||+|+|||++++. .........+...+.+++
T Consensus 138 Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLD 216 (435)
T ss_dssp EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEE
T ss_pred EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEE
Confidence 5667789999887655443 4568999999999998 78999999999999999998763 333333334445688999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-EEEEEeCCCeEEEEE
Q 017421 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYD 255 (372)
Q Consensus 177 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-~l~s~s~dg~i~iwd 255 (372)
|+|++++|++|+.||.|++||++..... ... +|...|++++|+|++. +|++++.|+.|++||
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~~~~-~~~----------------~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGKELW-NLR----------------MHKKKVTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSCBCC-CSB----------------CCSSCEEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcceeE-EEe----------------cccceEEeeeecCCCceEEEEecCcceeeEEe
Confidence 9999999999999999999999754321 111 5778999999999876 788999999999999
Q ss_pred CCCCeEEEE---eecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 256 LEANKLSLR---ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 256 ~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
+++.+.... ..+|...|++++|+ |+|++|++++.||.|++||++
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESS
T ss_pred cccccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECC
Confidence 987654333 35799999999999 999999999999999999975
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1e-29 Score=233.52 Aligned_cols=237 Identities=11% Similarity=0.055 Sum_probs=192.5
Q ss_pred ccCCceeEeeeeeCCC------CCccccCCCCceEEEEECCC----C---CEEEEEeCCCcEEEEeCCCCeE-----EEE
Q 017421 100 SAADCCHMLSRYLPVN------GPWPVDQTTSRAYVSQFSAD----G---SLFVAGFQASQIRIYDVERGWK-----IQK 161 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~dg~i~vwd~~~~~~-----~~~ 161 (372)
.+.+..+.+|+..... ....+.+|...|.+++|+|+ + ++|++++.||.|++|++.++.. +..
T Consensus 32 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 32 CSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEE
T ss_pred EcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccccccee
Confidence 5566788899988776 46677899999999999999 9 9999999999999999987653 333
Q ss_pred eeecccC-----CcceEEEEEC----CCCCE-EEEEeCCCeEEEEECCC------CceeeecceeecccccceeccCCCC
Q 017421 162 DILAKSL-----RWTVTDTSLS----PDQRH-LVYASMSPIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGG 225 (372)
Q Consensus 162 ~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (372)
...| ...|.+++|+ |++++ |++++.||.|++||+.+ +............ -.......
T Consensus 112 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 184 (397)
T 1sq9_A 112 ---LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ----GTVESPMT 184 (397)
T ss_dssp ---ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEE----EEECCSSS
T ss_pred ---ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceee----eeeccccC
Confidence 3445 4789999999 99999 99999999999999987 4432200000000 00000013
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec---C---CCCeEEEEEeCCCCCEEEEEeCC---CeEEE
Q 017421 226 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA---H---TSDVNTVCFGDESGHLIYSGSDD---NLCKV 296 (372)
Q Consensus 226 h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~sp~~~~~l~s~~~d---g~i~v 296 (372)
|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. | ...|.+++|+ |++++|++++.| +.|++
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~-~~~~~l~~~~~d~~~g~i~i 262 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS-PQGSLLAIAHDSNSFGCITL 262 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC-SSTTEEEEEEEETTEEEEEE
T ss_pred CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC-CCCCEEEEEecCCCCceEEE
Confidence 56789999999999 999999999999999999999999998 8 9999999999 899999999999 99999
Q ss_pred Eeccc------ccC-------------CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 297 NSVLL------LTR-------------SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 297 wd~~~------~~~-------------~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
||+++ +.. |...|.+++|+|++++|++++ .|+.|++||+.+++.+..+.
T Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 263 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG------WDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE------TTSEEEEEETTTTEEEEEEE
T ss_pred EECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe------CCCeEEEEEcCCCceeEEEe
Confidence 99873 334 889999999999999999886 68999999999999999888
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=235.67 Aligned_cols=224 Identities=13% Similarity=0.164 Sum_probs=179.3
Q ss_pred ccc-cCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCC---CeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe
Q 017421 118 WPV-DQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVER---GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (372)
Q Consensus 118 ~~~-~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 192 (372)
..+ .+|.+.|++++|+| ++++|++|+.||.|+|||+.+ +..... ....+|...|.+++|+|++++|++++.||.
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS-SLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC-SEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce-eeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 345 78999999999999 999999999999999999876 431111 112257789999999999999999999999
Q ss_pred EEEEECC---CCceeeecceeecccccceeccCCCCccccEEEEE--EcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q 017421 193 VHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLK--FSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (372)
Q Consensus 193 i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~--~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 267 (372)
|++||+. .++........ ....+.+.+. ++...+.++. ++|++++|++++.|+.|++||+++++++..+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCE-CIRKINLKNF---GKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEE-EEEEEEGGGG---SSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeccccCCceeeccccc-eeEEEEccCc---ccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 9999995 44433222211 1112222221 1334677777 668999999999999999999999999999987
Q ss_pred --CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------c-CCCCCeeEEEec----cCCCeEEEEeeeeEEEeec
Q 017421 268 --HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------T-RSINPCNKYLFN----PCNKYLIIYLILVISIYSP 334 (372)
Q Consensus 268 --~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~-~~~~~v~~~~~s----~~g~~l~~~~~~~~~~~d~ 334 (372)
|...|++++|+ |++++|++|+.||.|++||++.. . .+..+|.+++|+ |++++|++++ .|+
T Consensus 211 ~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~------~dg 283 (437)
T 3gre_A 211 SPRHGAVSSICID-EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS------SKT 283 (437)
T ss_dssp CGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES------TTE
T ss_pred CCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc------CCC
Confidence 88999999999 99999999999999999999732 2 566789999555 5688888886 689
Q ss_pred eEEEeecccceEEEEEeee
Q 017421 335 NILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 335 ~i~lw~~~~~~~~~~~~~h 353 (372)
.|++||+.+++.+..+.+|
T Consensus 284 ~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp EEEEEETTTTEEEEEEESS
T ss_pred cEEEEEcCCCcEEEEEEcC
Confidence 9999999999999998877
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=227.07 Aligned_cols=223 Identities=13% Similarity=0.102 Sum_probs=180.2
Q ss_pred ccCCceeEeeeeeCCC-CCccccCCCCceEEEE------ECCCCCEEEEEeCCCcEEEEeCCCCe-EEEEeeecccC-Cc
Q 017421 100 SAADCCHMLSRYLPVN-GPWPVDQTTSRAYVSQ------FSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSL-RW 170 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~-~~ 170 (372)
.+.+..+.+|+..... ....+.+|...|.+++ |+|++++|++++.||.|++||+.++. .+.......++ ..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 4556778899888776 6777889999999995 57899999999999999999999875 33332221222 33
Q ss_pred ceEEEE----ECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC---CCCEEE
Q 017421 171 TVTDTS----LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST---DGRELV 243 (372)
Q Consensus 171 ~v~~~~----~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp---~~~~l~ 243 (372)
.+.++. |+|+++++++++.||.|++||+++++..... .|...|.+++|+| ++.+|+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET-----------------NIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-----------------ECSSCEEEEEESCSSSSCCEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-----------------CCCCceEEEEcCCCCCCCCEEE
Confidence 688888 7899999999999999999999988753322 2556899999999 999999
Q ss_pred EEeCCCeEEEEECCCCeEEEEee-----cCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEeccc----------------
Q 017421 244 AGSSDDCIYVYDLEANKLSLRIL-----AHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLL---------------- 301 (372)
Q Consensus 244 s~s~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~---------------- 301 (372)
+++.||.|++||+++++....+. +|...|++++|+ |++. +|++++.||.|++||++.
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~ 307 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL-PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGV 307 (357)
T ss_dssp EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE-TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCC
T ss_pred EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC-CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccc
Confidence 99999999999998876544443 899999999999 8887 899999999999999862
Q ss_pred ---------ccCCCCCeeEEEeccCCCeEE-EEeeeeEEEeeceEEEeecccceE
Q 017421 302 ---------LTRSINPCNKYLFNPCNKYLI-IYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 302 ---------~~~~~~~v~~~~~s~~g~~l~-~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+..|...|++++|+|+|++|+ +++ .|+.|++||+.+.+.
T Consensus 308 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~------~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 308 AGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS------FDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE------TTSEEEEEEECC---
T ss_pred ccccceeeccccCCCCeeEEEEcCCCCeEEEEec------CCCcEEEEECCCccc
Confidence 336888999999999999998 564 689999999987654
No 65
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3.5e-29 Score=229.91 Aligned_cols=225 Identities=16% Similarity=0.051 Sum_probs=184.6
Q ss_pred ccCCceeEeeeeeCCCC-----CccccCC-----CCceEEEEEC----CCCCE-EEEEeCCCcEEEEeCCC------CeE
Q 017421 100 SAADCCHMLSRYLPVNG-----PWPVDQT-----TSRAYVSQFS----ADGSL-FVAGFQASQIRIYDVER------GWK 158 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~vwd~~~------~~~ 158 (372)
.+.+..+.+|+...... ...+..| ...|.+++|+ |++++ |++++.||.|++||+.. +..
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 45567788999887776 6677788 5999999999 99999 99999999999999987 433
Q ss_pred EE-----Eee----ecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCc---
Q 017421 159 IQ-----KDI----LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGY--- 226 (372)
Q Consensus 159 ~~-----~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--- 226 (372)
+. ... ....|...|.+++|+|++ ++++++.||.|++||+++++........ .+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~h~~~ 232 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ-------------HSMINN 232 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC-------------C---CC
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc-------------cccccc
Confidence 32 211 014567789999999999 9999999999999999987754433310 015
Q ss_pred cccEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeEEEEeec-------------CCCCeEEEEEeCCCCCEEEEEeC
Q 017421 227 SFGIFSLKFSTDGRELVAGSSD---DCIYVYDLEANKLSLRILA-------------HTSDVNTVCFGDESGHLIYSGSD 290 (372)
Q Consensus 227 ~~~i~~~~~sp~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~sp~~~~~l~s~~~ 290 (372)
...|.+++|+|++++|++++.| +.|++||+++++.+..+.. |...|.+++|+ |++++|++++.
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 311 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSGETLCSAGW 311 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC-SSSSEEEEEET
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEEC-CCCCEEEEEeC
Confidence 5689999999999999999999 9999999999999999988 99999999999 99999999999
Q ss_pred CCeEEEEeccc------cc------CC---------------CCCeeEEEeccCC----------CeEEEEeeeeEEEee
Q 017421 291 DNLCKVNSVLL------LT------RS---------------INPCNKYLFNPCN----------KYLIIYLILVISIYS 333 (372)
Q Consensus 291 dg~i~vwd~~~------~~------~~---------------~~~v~~~~~s~~g----------~~l~~~~~~~~~~~d 333 (372)
||.|++||++. +. .| ...|++++|+|+| ++|++++ .|
T Consensus 312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~------~d 385 (397)
T 1sq9_A 312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC------LD 385 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE------TT
T ss_pred CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec------CC
Confidence 99999999972 33 56 8899999999998 6888776 69
Q ss_pred ceEEEeecccce
Q 017421 334 PNILLDNYFLLR 345 (372)
Q Consensus 334 ~~i~lw~~~~~~ 345 (372)
+.|++|++.+|+
T Consensus 386 g~i~iw~~~~g~ 397 (397)
T 1sq9_A 386 RSIRWFREAGGK 397 (397)
T ss_dssp TEEEEEEEEC--
T ss_pred CcEEEEEcCCCC
Confidence 999999998874
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.9e-28 Score=225.95 Aligned_cols=229 Identities=17% Similarity=0.179 Sum_probs=188.0
Q ss_pred ccCCceeEeeeeeCCCCCccccC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQ-TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
.+.+..+.+|+.........+.. |...|.+++|+|++++|++|+.||.|++||+.++..+.. ...|...|.+++|
T Consensus 109 ~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~- 184 (401)
T 4aez_A 109 VALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT---MAGHQARVGCLSW- 184 (401)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEE-
T ss_pred EECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE---ecCCCCceEEEEE-
Confidence 55567788888877665555554 899999999999999999999999999999998876665 4578889999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCce-eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 017421 179 PDQRHLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (372)
Q Consensus 179 ~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~ 257 (372)
+++.+++++.||.|++||++.... ..... +|...|.+++|+|++++|++++.|+.|++||++
T Consensus 185 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 185 -NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ----------------GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp -ETTEEEEEETTSEEEEEETTSSSCEEEEEE----------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -CCCEEEEEcCCCCEEEEecccCcceeeEEc----------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 567999999999999999985432 21111 467799999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe--CCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 258 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
+++.+..+..|...|.+++|+|....++++++ .|+.|++||+++.. .+...|.+++|+|++++++++.+.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~--- 324 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF--- 324 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECT---
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeec---
Confidence 99999999999999999999943556777765 79999999997433 466789999999999999985311
Q ss_pred EeeceEEEeecccceEEEE--Eeee
Q 017421 331 IYSPNILLDNYFLLRTFYS--FMVH 353 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~~~~~--~~~h 353 (372)
.|+.|++|++.+++.... +.+|
T Consensus 325 -~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 325 -PDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp -TTCEEEEEEEETTEEEEEEEEECC
T ss_pred -CCCcEEEEecCCccceeEEEecCC
Confidence 478999999988665443 4444
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=4.8e-29 Score=249.88 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=200.8
Q ss_pred cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC
Q 017421 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
+++++.+ ...+..+.+|+.........+.+|...|.+++|+|++++|++++.||.|+||++.++..+.. ..+|.
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~ 97 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAHP 97 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---EecCC
Confidence 3444433 44566788998877777778889999999999999999999999999999999999876665 45788
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCce-eeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeC
Q 017421 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSS 247 (372)
Q Consensus 170 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~ 247 (372)
..|.+++|+|++++|++++.||.|++||+.++.. ..... +|...|.+++|+| +++.|++++.
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~----------------~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE----------------GHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE----------------CCSSCEEEEEEETTEEEEEEEEET
T ss_pred CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc----------------CCCCcEEEEEEEcCCCCEEEEEeC
Confidence 8999999999999999999999999999987632 22211 4667999999999 8899999999
Q ss_pred CCeEEEEECCCCeEEEEeecCC-CCeEEEEEeCC--CCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCC
Q 017421 248 DDCIYVYDLEANKLSLRILAHT-SDVNTVCFGDE--SGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCN 318 (372)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~sp~--~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g 318 (372)
||.|++||+.++.....+..+. ..+.+++|+ | ++.+|++++.||.|++||+++ +..|...|.+++|+|+|
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEEC-CSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEE-ECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 9999999999888777776554 899999999 6 899999999999999999873 34788999999999999
Q ss_pred CeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 319 KYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 319 ~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+++++++ .|+.|++||..+++.+..+..|
T Consensus 241 ~~l~~~~------~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 241 PIIISGS------EDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp SEEEEEE------TTSCEEEEETTTCSEEEEECCS
T ss_pred CEEEEEe------CCCeEEEEECCCCcEEEEeecC
Confidence 9999886 6899999999999988887665
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=8.4e-29 Score=226.62 Aligned_cols=233 Identities=12% Similarity=0.056 Sum_probs=180.3
Q ss_pred ccCCceeEeeeeeCCCCCcccc--CCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEE
Q 017421 100 SAADCCHMLSRYLPVNGPWPVD--QTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (372)
.+.+..+.+|+.........+. +|...|.+++|+| ++++|++++.|+.|++||+.+. .+........+...|.+++
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 92 GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEE
T ss_pred EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEE
Confidence 4556788899887666555554 6999999999999 7899999999999999999864 4444444445567899999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-EEEEEeCCCeEEEEE
Q 017421 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYD 255 (372)
Q Consensus 177 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-~l~s~s~dg~i~iwd 255 (372)
|+|++++|++++.|+.|++||++ ++...... +|...|.+++|+|+++ +|++++.|+.|++||
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~----------------~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK----------------LHKAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEETT-SCEEEEEE----------------CSSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECC-CCEEEEec----------------cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 99999999999999999999995 33322221 4667999999999998 999999999999999
Q ss_pred CCC----CeEEEEeecCCCCeEEEEEeCC-CCCEEEEEeCCCeEEEEeccccc-------------CCCCCeeEEEeccC
Q 017421 256 LEA----NKLSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVNSVLLLT-------------RSINPCNKYLFNPC 317 (372)
Q Consensus 256 ~~~----~~~~~~~~~~~~~v~~~~~sp~-~~~~l~s~~~dg~i~vwd~~~~~-------------~~~~~v~~~~~s~~ 317 (372)
+++ +..+..+ +|...|.+++|+ | ++++|++++.|+.|++||+++.. .+...+. +.|+|+
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~v~~~~~s-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 310 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM-PHEKPVNAAYFN-PTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPM 310 (383)
T ss_dssp GGGCCSTTCEEEEE-ECSSCEEEEEEC-TTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSS
T ss_pred CCCCCcccceEEEe-cCCCceEEEEEc-CCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE-EeccCC
Confidence 998 5666666 699999999999 7 99999999999999999987432 1223333 244444
Q ss_pred CCeEEEEee--ee-EEEeeceEEEeecccceEEEEEeee
Q 017421 318 NKYLIIYLI--LV-ISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 318 g~~l~~~~~--~~-~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+..++++.. +. ....|+.|++||+.+++.+..+.+|
T Consensus 311 ~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 311 YDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCC
Confidence 444433210 00 0015899999999999999888763
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=8.8e-29 Score=229.03 Aligned_cols=234 Identities=18% Similarity=0.179 Sum_probs=185.2
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+.+|...|.+++|+|++++|++|+.|+.|++||+.++..+.. ..+|...|.+++|+|
T Consensus 115 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~h~~~v~~~~~~~ 191 (420)
T 3vl1_A 115 GTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT---LIGHRATVTDIAIID 191 (420)
T ss_dssp EETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE---EECCSSCEEEEEEET
T ss_pred EECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE---EcCCCCcEEEEEEcC
Confidence 45566788888766655566679999999999999999999999999999999998866554 457888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeeccc----ccceeccCC----CCccccEEEEEEcCCCCEEEEEeCCCeE
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD----GLDFSAADD----GGYSFGIFSLKFSTDGRELVAGSSDDCI 251 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~h~~~i~~~~~sp~~~~l~s~s~dg~i 251 (372)
++++|++++.|+.|++||+++++..........+. .+.+.+... ..+...+.+++|+|++++|++++.||.|
T Consensus 192 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 271 (420)
T 3vl1_A 192 RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVI 271 (420)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCE
T ss_pred CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeE
Confidence 99999999999999999999887654443211111 111111110 0133466777789999999999999999
Q ss_pred EEEECCCCeEEEEee-cCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEeccccc--------CCCCCeeEEEeccCCCeE
Q 017421 252 YVYDLEANKLSLRIL-AHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLLLT--------RSINPCNKYLFNPCNKYL 321 (372)
Q Consensus 252 ~iwd~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~g~~l 321 (372)
++||+++++.+..+. .|...|.+++|+ |++. +|++|+.||.|++||++... .+...|..+.| +++++|
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l 349 (420)
T 3vl1_A 272 TVHNVFSKEQTIQLPSKFTCSCNSLTVD-GNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALF 349 (420)
T ss_dssp EEEETTTCCEEEEECCTTSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEE
T ss_pred EEEECCCCceeEEcccccCCCceeEEEe-CCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEE
Confidence 999999988777665 588899999999 7777 99999999999999997432 26677888855 577888
Q ss_pred EEEeeeeEEEeeceEEEeecccc
Q 017421 322 IIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
++++ .|+.|++|++...
T Consensus 350 ~s~~------~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 350 VSSG------FDTSIKLDIISDP 366 (420)
T ss_dssp EEET------TTEEEEEEEECCT
T ss_pred EEec------CCccEEEEeccCC
Confidence 8876 6899999998763
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.4e-28 Score=219.13 Aligned_cols=254 Identities=14% Similarity=0.117 Sum_probs=201.1
Q ss_pred eeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 017421 84 KMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER 155 (372)
Q Consensus 84 ~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 155 (372)
..+.+|... +++++.+ .+.+..+.+|+.........+.+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 334555542 4555433 44566788998887777788899999999999999999999999999999999999
Q ss_pred CeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCceeeecceee--------------ccccc
Q 017421 156 GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTMESLANVTE--------------IHDGL 216 (372)
Q Consensus 156 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~--------------~~~~~ 216 (372)
+..+.... +...+.++.|+|+++++++++.+ +.|.+||+..+.......... ....+
T Consensus 106 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 106 GQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp CCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 87666532 56689999999999999999998 999999987654211100000 00011
Q ss_pred ceecc-------------------C-------CCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC
Q 017421 217 DFSAA-------------------D-------DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS 270 (372)
Q Consensus 217 ~~~~~-------------------~-------~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 270 (372)
.+.+. . ..+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +..
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~ 260 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDC 260 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCC
Confidence 11111 0 02477899999999999999999999999999999999888887 778
Q ss_pred CeEEEEEeCCCCCEEEEEeCCC--------------eEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 271 DVNTVCFGDESGHLIYSGSDDN--------------LCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~dg--------------~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
.+.+++|+ |+++++++++.++ .+++||+.+ +..|...|++++|+|++++|++++
T Consensus 261 ~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~----- 334 (369)
T 3zwl_B 261 PLNTAVIT-PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG----- 334 (369)
T ss_dssp CEEEEEEC-SSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-----
T ss_pred CceeEEec-CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc-----
Confidence 99999999 9999999999888 899999873 447899999999999999999886
Q ss_pred EeeceEEEeecccceEEEE
Q 017421 331 IYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~~~~~ 349 (372)
.|+.|++|++..+.....
T Consensus 335 -~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 335 -EDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp -TTSEEEEEEECHHHHTCC
T ss_pred -CCCeEEEEECccccchhH
Confidence 689999999988764443
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=223.28 Aligned_cols=217 Identities=15% Similarity=0.114 Sum_probs=176.2
Q ss_pred eeCCCCCccccCCCCceEEEEECCC---CCEEEEEeCCCcEEEEeCCC-CeEEEEeeecccCCcceEEEEECCCCCEEEE
Q 017421 111 YLPVNGPWPVDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186 (372)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 186 (372)
..+......+.+|.+.|++++|+|+ |++|++|+.||.|+||++.+ +..+.. ...+|...|.+++|+|++++|++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK--AQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE--EEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE--EeccccCCEEEEEECcCCCEEEE
Confidence 3344455667899999999999999 69999999999999999987 444322 24568889999999999999999
Q ss_pred EeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCeEEEE
Q 017421 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGRELVAGSSDDCIYVYDLEANKLSLR 264 (372)
Q Consensus 187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 264 (372)
++.||.|++||+.+++..... +|...|.+++| +|++++|++++.|+.|++||+++++.+..
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIA-----------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEE-----------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred EcCCCcEEEEEcCCCCceeec-----------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 999999999999988764422 26679999999 89999999999999999999998877666
Q ss_pred eecCC-----------------------------------------CCeEEEEEeCCCCC----EEEEEeCCCeEEEEec
Q 017421 265 ILAHT-----------------------------------------SDVNTVCFGDESGH----LIYSGSDDNLCKVNSV 299 (372)
Q Consensus 265 ~~~~~-----------------------------------------~~v~~~~~sp~~~~----~l~s~~~dg~i~vwd~ 299 (372)
+..+. ..+.++++. ++.. .+++++.||.|++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF-KDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE-ECTTSCEEEEEEEETTSEEEEEES
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEc-ccCCCCCCeEEEecCCCcEEEEec
Confidence 65432 233444444 3332 3999999999999998
Q ss_pred ccc---------cCCCC------------CeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 300 LLL---------TRSIN------------PCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 300 ~~~---------~~~~~------------~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+.. ..|.. +|++++|+|++++|++++ .|+.|++||+.+++.+..+.+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~ 314 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG------SDGRFSFWDKDARTKLKTSEQL 314 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE------TTSCEEEEETTTTEEEEECCCC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc------cCCeEEEEECCCCcEEEEecCC
Confidence 743 24443 799999999999999886 7999999999999999888776
No 72
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=5.3e-28 Score=215.01 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=179.5
Q ss_pred ccCCceeEeeeeeCCCCCcc--ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEe---------------
Q 017421 100 SAADCCHMLSRYLPVNGPWP--VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD--------------- 162 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--------------- 162 (372)
.+.|+.+++|+....+.... +.+|...|.+++|+|++++|++|+.||+|++|++.+++.+...
T Consensus 41 vg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~ 120 (318)
T 4ggc_A 41 VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 120 (318)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETT
T ss_pred EEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCC
Confidence 34577889998877664444 4578889999999999999999999999999999987654332
Q ss_pred -----------------------eecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeeccccccee
Q 017421 163 -----------------------ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFS 219 (372)
Q Consensus 163 -----------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 219 (372)
....+|...+..+.++++++++++++.|+.|++||+++++..........
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------- 193 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT------- 193 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC-------
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec-------
Confidence 11235666788999999999999999999999999988764322221111
Q ss_pred ccCCCCccccEEEEEEcCCCCEE---EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe--CCCeE
Q 017421 220 AADDGGYSFGIFSLKFSTDGREL---VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLC 294 (372)
Q Consensus 220 ~~~~~~h~~~i~~~~~sp~~~~l---~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~i 294 (372)
.+...|.++.++|++..+ ++++.++.|++||........... +...+..+.|+ +++..+++++ .|+.|
T Consensus 194 -----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~-~~~~~~~~~sg~~d~~i 266 (318)
T 4ggc_A 194 -----QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWS-PHYKELISGHGFAQNQL 266 (318)
T ss_dssp -----CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEE-TTTTEEEEEECTTTCCE
T ss_pred -----ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeec-ccccceEEEEEcCCCEE
Confidence 355689999999976533 456678999999999887765554 67789999999 7777776654 79999
Q ss_pred EEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 295 KVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 295 ~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
++||+++ +.+|...|++++|+|+|++|++++ .|++|++||+....
T Consensus 267 ~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s------~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 267 VIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA------ADETLRLWRCFELD 317 (318)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE------TTTEEEEECCSCCC
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe------cCCeEEEEECCCCC
Confidence 9999873 458999999999999999999887 79999999987654
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=233.36 Aligned_cols=232 Identities=15% Similarity=0.131 Sum_probs=191.0
Q ss_pred ccCCceeEeeeeeC----CCCCccccCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCe------EEEEeeecccC
Q 017421 100 SAADCCHMLSRYLP----VNGPWPVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGW------KIQKDILAKSL 168 (372)
Q Consensus 100 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~------~~~~~~~~~~~ 168 (372)
.+.+..+.+|+... ......+.+|...|.+++|+|+ +++|++++.|+.|++||+.++. ..........|
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 44567788888876 2345567889999999999998 8999999999999999999875 33332234577
Q ss_pred CcceEEEEECCC-CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEe
Q 017421 169 RWTVTDTSLSPD-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGS 246 (372)
Q Consensus 169 ~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s 246 (372)
...|.+++|+|+ +.+|++++.|+.|++||+++++........... .+|...|.+++|+|++ .+|++++
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN----------SGIKQQLSVVEWHPKNSTRVATAT 234 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS----------SCCCCCEEEEEECSSCTTEEEEEE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc----------cccCCceEEEEECCCCCCEEEEEE
Confidence 889999999998 789999999999999999988765443322111 1346789999999997 6899999
Q ss_pred CCC---eEEEEECCCC-eEEEEee-cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEec
Q 017421 247 SDD---CIYVYDLEAN-KLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFN 315 (372)
Q Consensus 247 ~dg---~i~iwd~~~~-~~~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s 315 (372)
.|+ .|++||++++ .++..+. +|...|.+++|+|.++++|++++.|+.|++||+++ +..|...|.+++|+
T Consensus 235 ~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEEC
T ss_pred CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEEC
Confidence 998 9999999986 5667777 89999999999943999999999999999999874 34788999999999
Q ss_pred cCC-CeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 316 PCN-KYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 316 ~~g-~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
|++ .+|++++ .|+.|++|++.+++..
T Consensus 315 ~~~~~~l~s~~------~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 315 PEAPDLFACAS------FDNKIEVQTLQNLTNT 341 (416)
T ss_dssp TTCTTEEEECC------SSSEEEEEESCCCCCS
T ss_pred CCCCCEEEEEe------cCCcEEEEEccCCCCC
Confidence 999 7888776 6899999999887643
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.6e-28 Score=220.37 Aligned_cols=213 Identities=9% Similarity=-0.011 Sum_probs=169.2
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEE-EEeeecccCCcceEEEEECC--CCCEEEEEeCCCeEE
Q 017421 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVH 194 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 194 (372)
..+.+|.+.|++++|+|++++|++|+.||.|+||++.++... .......+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456789999999999999999999999999999999875321 22223557888999999999 699999999999999
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCeEEEEee------
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANKLSLRIL------ 266 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~------ 266 (372)
+||++++............. . ..+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~--~-----~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLC--T-----LNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEE--E-----ECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred EEecCCCcccccccCcceee--e-----ecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 99998874311100000000 0 0146779999999999 9999999999999999998876433322
Q ss_pred -------cCCCCeEEEEEeCCC---CCEEEEEeCCCeEEEEecc--------cccCCCCCeeEEEeccCC----CeEEEE
Q 017421 267 -------AHTSDVNTVCFGDES---GHLIYSGSDDNLCKVNSVL--------LLTRSINPCNKYLFNPCN----KYLIIY 324 (372)
Q Consensus 267 -------~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~vwd~~--------~~~~~~~~v~~~~~s~~g----~~l~~~ 324 (372)
.|...+.+++|+ |+ +.+|++++.|+.+.+|+.. .+..|...|++++|+|++ ++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWC-PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp SCSCCCSSCSCCCEEEEEC-CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred ccccccCCcccceeEEEec-cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 577899999999 65 8999999999999888754 344788999999999998 788887
Q ss_pred eeeeEEEeeceEEEeecccc
Q 017421 325 LILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 325 ~~~~~~~~d~~i~lw~~~~~ 344 (372)
+ .|+.|++||+..+
T Consensus 237 ~------~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 237 C------KDGRIRIFKITEK 250 (351)
T ss_dssp E------TTSCEEEEEEEEC
T ss_pred c------CCCeEEEEeCCCC
Confidence 6 6888888888775
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.3e-28 Score=246.78 Aligned_cols=212 Identities=16% Similarity=0.132 Sum_probs=187.4
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|.+.|.+++|+|++++|++++.||.|+|||+.++..+.. ...|..+|.+++|+|++++|++++.||.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 345688999999999999999999999999999999999876665 44788899999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeecCCCCeEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNTV 275 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~ 275 (372)
|+.+++...... +|...|.+++|+|++++|++++.||.|++||+.++ .....+.+|...|.++
T Consensus 83 ~~~~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 83 NYNTGEKVVDFE----------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp ETTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred ECCCCcEEEEEe----------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 999887644332 46779999999999999999999999999999987 6778888999999999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEecc--CCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNP--CNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~--~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+|+|.++..|++++.||.|++||++... .+...+..++|+| ++.++++++ .|+.|++||+.+++.
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~------~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS------DDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC------TTSEEEEEETTTTEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe------CCCEEEEEECCCCcE
Confidence 9993389999999999999999986322 3448899999999 999999886 689999999999999
Q ss_pred EEEEeee
Q 017421 347 FYSFMVH 353 (372)
Q Consensus 347 ~~~~~~h 353 (372)
+..+.+|
T Consensus 221 ~~~~~~~ 227 (814)
T 3mkq_A 221 VATLEGH 227 (814)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9888877
No 76
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.9e-28 Score=225.21 Aligned_cols=234 Identities=15% Similarity=0.104 Sum_probs=171.9
Q ss_pred ccCCceeEeeeeeCCCCCcc--ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEee--------------
Q 017421 100 SAADCCHMLSRYLPVNGPWP--VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI-------------- 163 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------- 163 (372)
.+.|..+++|+......... +.+|...|++++|+|+|++|++|+.||.|+|||+.+++.+....
T Consensus 121 vgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~ 200 (420)
T 4gga_A 121 VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 200 (420)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred EEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCC
Confidence 44567888998876664443 45788899999999999999999999999999999886554311
Q ss_pred ------------------------ecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeeccccccee
Q 017421 164 ------------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFS 219 (372)
Q Consensus 164 ------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 219 (372)
...+|...+..+.|+|+++++++++.|+.+++|+..+++........
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~--------- 271 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT--------- 271 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE---------
T ss_pred EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeee---------
Confidence 11234445556666666666666666666666666554421111000
Q ss_pred ccCCCCccccEEEEEEcCCC-CEEEE--EeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe--CCCeE
Q 017421 220 AADDGGYSFGIFSLKFSTDG-RELVA--GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLC 294 (372)
Q Consensus 220 ~~~~~~h~~~i~~~~~sp~~-~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~i 294 (372)
...|...|.+++|+|++ .++++ |+.|++|++||+.++++...+..| ..+.++.|+ ++++.+++++ .|+.|
T Consensus 272 ---~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~-~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 272 ---FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWS-PHYKELISGHGFAQNQL 346 (420)
T ss_dssp ---ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEE-TTTTEEEEEECTTTCCE
T ss_pred ---ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeec-CCCCeEEEEEecCCCEE
Confidence 02477799999999976 45554 457999999999999998888755 578899999 8888887765 78999
Q ss_pred EEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 295 KVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 295 ~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+|||+++ +.+|...|++++|+|+|++|++++ .|++|++||+....+.+....+
T Consensus 347 ~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s------~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 347 VIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA------ADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE------TTTEEEEECCSCSSCC------
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe------cCCeEEEEECCCCCccchhhhc
Confidence 9999873 458999999999999999999887 7999999999877665554444
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=229.92 Aligned_cols=230 Identities=13% Similarity=0.110 Sum_probs=179.7
Q ss_pred ccCCceeEeeeeeCCCC-----------CccccCCC------------CceEEEEECCCC--CEEEEEeCCCcEEEEeCC
Q 017421 100 SAADCCHMLSRYLPVNG-----------PWPVDQTT------------SRAYVSQFSADG--SLFVAGFQASQIRIYDVE 154 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~------------~~v~~~~~s~~~--~~l~~~~~dg~i~vwd~~ 154 (372)
.+.+..+.+|+...... ...+.+|. ..|.+++|+|++ .+|++++.|+.|++|++.
T Consensus 46 g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~ 125 (447)
T 3dw8_B 46 GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKIS 125 (447)
T ss_dssp EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEE
T ss_pred EcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecc
Confidence 45567888998876552 45677898 889999999998 899999999999999987
Q ss_pred CCeEEE-------------------------------------EeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 155 RGWKIQ-------------------------------------KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 155 ~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
.+.... ......+|...|.+++|+|++++|+++ .|+.|++||
T Consensus 126 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd 204 (447)
T 3dw8_B 126 ERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWH 204 (447)
T ss_dssp EEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEE
T ss_pred cccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEE
Confidence 643311 012245788899999999999999998 799999999
Q ss_pred CCCCc-eeeecceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeE----EEEeecCCC-
Q 017421 198 VGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKL----SLRILAHTS- 270 (372)
Q Consensus 198 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~- 270 (372)
+++.. ........ +....+|...|.+++|+|++ ++|++|+.||.|++||+++++. ...+..|..
T Consensus 205 ~~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 275 (447)
T 3dw8_B 205 LEITDRSFNIVDIK---------PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDP 275 (447)
T ss_dssp TTEEEEEEEEEECC---------CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---
T ss_pred CCCCCceeeeeecc---------cccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCc
Confidence 98433 22211100 00111477799999999998 9999999999999999999886 678888876
Q ss_pred -----------CeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-c------cCCCCC---------------eeEEEeccC
Q 017421 271 -----------DVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-L------TRSINP---------------CNKYLFNPC 317 (372)
Q Consensus 271 -----------~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-~------~~~~~~---------------v~~~~~s~~ 317 (372)
.|.+++|+ |++++|++++. +.|++||++. . ..|... +..++|+|+
T Consensus 276 ~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~ 353 (447)
T 3dw8_B 276 SNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGS 353 (447)
T ss_dssp --CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTT
T ss_pred cccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCC
Confidence 89999999 89999999998 9999999974 2 233321 234999999
Q ss_pred CCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 318 NKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 318 g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
+++|++++ .|+.|++||+.+++.+
T Consensus 354 ~~~l~s~s------~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 354 DSVVMTGS------YNNFFRMFDRNTKRDI 377 (447)
T ss_dssp SSEEEEEC------STTEEEEEETTTCCEE
T ss_pred CCEEEEec------cCCEEEEEEcCCCcce
Confidence 99999886 7999999999998876
No 78
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=3e-28 Score=226.68 Aligned_cols=225 Identities=11% Similarity=0.103 Sum_probs=182.2
Q ss_pred ccCCceeEeeeeeC----------CCCCccccCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCe----EEEEeee
Q 017421 100 SAADCCHMLSRYLP----------VNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGW----KIQKDIL 164 (372)
Q Consensus 100 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~----~~~~~~~ 164 (372)
.+.+..+.+|+... ......+.+|...|.+++|+|+++ +|++|+.||.|++|++..+. .+.....
T Consensus 147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEE
T ss_pred ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecccee
Confidence 34456788888876 455667789999999999999988 99999999999999998732 2222233
Q ss_pred cccCCcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-EE
Q 017421 165 AKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-EL 242 (372)
Q Consensus 165 ~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-~l 242 (372)
...|...|.+++|+| ++.+|++++.||.|++||++++.......... .|...|++++|+|++. +|
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-------------AHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-------------CCSSCEEEEEECSSCTTEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-------------cCCCCeEEEEeCCCCCCEE
Confidence 557888999999999 77889999999999999999764211111111 3667999999999987 68
Q ss_pred EEEeCCCeEEEEECCC-CeEEEEeecCCCCeEEEEEeCCCC-CEEEEEeCCCeEEEEeccc-------------------
Q 017421 243 VAGSSDDCIYVYDLEA-NKLSLRILAHTSDVNTVCFGDESG-HLIYSGSDDNLCKVNSVLL------------------- 301 (372)
Q Consensus 243 ~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~-~~l~s~~~dg~i~vwd~~~------------------- 301 (372)
++|+.||.|++||+++ ..++..+..|...|.+++|+ |++ .+|++++.|+.|++||++.
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s-p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 372 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC-SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC-CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEE
Confidence 8999999999999998 56788888999999999999 666 5899999999999999975
Q ss_pred -ccCCCCCeeEEEeccCCC-eEEEEeeeeEEEeeceEEEeecccc
Q 017421 302 -LTRSINPCNKYLFNPCNK-YLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 302 -~~~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
..+|...|++++|+|++. +|++++ .|+.|++|++...
T Consensus 373 ~~~~h~~~v~~~~~~p~~~~~l~s~s------~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 373 IHGGHTAKISDFSWNPNEPWIICSVS------EDNIMQVWQMAEN 411 (430)
T ss_dssp ECCCCSSCEEEEEECSSSTTEEEEEE------TTSEEEEEEECHH
T ss_pred EcCCCCCCceEEEECCCCCCEEEEEE------CCCCEEEeEcccc
Confidence 125778899999999999 666665 6899999988654
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.6e-28 Score=222.77 Aligned_cols=218 Identities=13% Similarity=0.049 Sum_probs=184.7
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEee----------------
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI---------------- 163 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------------- 163 (372)
.+.+..+.+|+ ........+..|...|.+++|+|++++|++++.|+.|++||+.++..+....
T Consensus 126 ~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 126 GVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp EETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred EeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 44556788887 4555566778899999999999999999999999999999998775543211
Q ss_pred -------------------------------------ecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 017421 164 -------------------------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (372)
Q Consensus 164 -------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (372)
....|...|.+++|+|++++|++++.|+.|++||+.+++....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 205 DGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp -CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred CcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE
Confidence 1235667899999999999999999999999999988765433
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEE
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIY 286 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 286 (372)
.. +|...|.+++|+|++ ++++++.|+.|++||+++++.+..+..|...|.+++|+ |++++|+
T Consensus 285 ~~----------------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~ 346 (425)
T 1r5m_A 285 FY----------------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS-QDGQKYA 346 (425)
T ss_dssp EC----------------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC-TTSSEEE
T ss_pred ec----------------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc-CCCCEEE
Confidence 32 466799999999999 99999999999999999999999999999999999999 9999999
Q ss_pred EEeCCCeEEEEeccccc--------------------------CCCC--CeeEEEeccCCCeEEEEeeeeEEEeeceEEE
Q 017421 287 SGSDDNLCKVNSVLLLT--------------------------RSIN--PCNKYLFNPCNKYLIIYLILVISIYSPNILL 338 (372)
Q Consensus 287 s~~~dg~i~vwd~~~~~--------------------------~~~~--~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~l 338 (372)
+++.||.|++||++... .|.. .|++++|+|++++|++++ .|+.|++
T Consensus 347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~i 420 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY------SLQEGSV 420 (425)
T ss_dssp EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE------SSSCCEE
T ss_pred EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe------cCceEEE
Confidence 99999999999986322 4544 999999999999998886 6899999
Q ss_pred eecc
Q 017421 339 DNYF 342 (372)
Q Consensus 339 w~~~ 342 (372)
|++.
T Consensus 421 w~~~ 424 (425)
T 1r5m_A 421 VAIP 424 (425)
T ss_dssp EECC
T ss_pred Eeec
Confidence 9874
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.9e-28 Score=224.64 Aligned_cols=226 Identities=12% Similarity=0.023 Sum_probs=182.5
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+.+|...|.+++| +++.|++|+.||.|++||+........ ...+|...|.+++|+|
T Consensus 152 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 152 GLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIG--TLQGHSSEVCGLAWRS 227 (401)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE--EEECCSSCEEEEEECT
T ss_pred ECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceee--EEcCCCCCeeEEEEcC
Confidence 445667888888777777788899999999999 467999999999999999984432222 2457888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEe--CCCeEEEEEC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGS--SDDCIYVYDL 256 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s--~dg~i~iwd~ 256 (372)
++++|++++.|+.|++||++++....... +|...|.+++|+|++ .++++++ .|+.|++||+
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~----------------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKT----------------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEEC----------------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEec----------------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 99999999999999999999876543322 466799999999976 4566655 6999999999
Q ss_pred CCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe--CCCeEEEEeccc--------ccCCCCCeeEEEeccCCCeEEEEee
Q 017421 257 EANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLCKVNSVLL--------LTRSINPCNKYLFNPCNKYLIIYLI 326 (372)
Q Consensus 257 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~i~vwd~~~--------~~~~~~~v~~~~~s~~g~~l~~~~~ 326 (372)
.+++.+..+. +...|.+++|+ +++++|++++ .||.|++||++. +..|...|.+++|+|+|++|++++
T Consensus 292 ~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~- 368 (401)
T 4aez_A 292 ATGARVNTVD-AGSQVTSLIWS-PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA- 368 (401)
T ss_dssp TTCCEEEEEE-CSSCEEEEEEC-SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC-
T ss_pred CCCCEEEEEe-CCCcEEEEEEC-CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe-
Confidence 9999888886 66789999999 9999999854 899999999874 347889999999999999999886
Q ss_pred eeEEEeeceEEEeecccceEEEEEeee
Q 017421 327 LVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|+.|++|++.+++.+.....+
T Consensus 369 -----~dg~i~iw~~~~~~~~~~~~~~ 390 (401)
T 4aez_A 369 -----SDENLKFWRVYDGDHVKRPIPI 390 (401)
T ss_dssp -----TTSEEEEEECCC----------
T ss_pred -----CCCcEEEEECCCCccccccccc
Confidence 6999999999999887765443
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-28 Score=243.56 Aligned_cols=223 Identities=13% Similarity=0.128 Sum_probs=187.5
Q ss_pred ccCCceeEeeeeeC--CCCCccccCCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421 100 SAADCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (372)
Q Consensus 100 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (372)
.+.+..+.+|+... ......+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++... .......|...|.++
T Consensus 27 g~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~-~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS-QIAVHAVHSASVNSV 105 (753)
T ss_dssp EETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEE
T ss_pred EECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc-ccccccCCCCCeEEE
Confidence 45567888998873 3445567899999999999998 999999999999999999987522 223356788899999
Q ss_pred EECCC--CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-------------CCC
Q 017421 176 SLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-------------DGR 240 (372)
Q Consensus 176 ~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-------------~~~ 240 (372)
+|+|+ ++.+++++.||.|++||++++......... +|...|.+++|+| ++.
T Consensus 106 ~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~--------------~~~~~v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID--------------AHAIGVNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE--------------CCSSCEEEEEECCCC---------CGGGC
T ss_pred EECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee--------------cCCCceEEEEecCcccccccccccCCCCC
Confidence 99999 999999999999999999887543222211 4667999999999 589
Q ss_pred EEEEEeCCCeEEEEECCCC----eEEEEeecCCCCeEEEEEeCCC---CCEEEEEeCCCeEEEEecccc-----------
Q 017421 241 ELVAGSSDDCIYVYDLEAN----KLSLRILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVNSVLLL----------- 302 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~vwd~~~~----------- 302 (372)
+|++|+.||.|++||++++ .....+.+|...|++++|+ |+ +++|++++.||.|++||++..
T Consensus 172 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s-p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 250 (753)
T 3jro_A 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 250 (753)
T ss_dssp CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC-CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSS
T ss_pred EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec-cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEecc
Confidence 9999999999999999876 5667788999999999999 77 899999999999999999753
Q ss_pred cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 303 TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 303 ~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
..+...|++++|+|+|+++++++ .|+.|++|++.++
T Consensus 251 ~~~~~~v~~l~~spdg~~l~s~s------~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 251 EKFPDVLWRASWSLSGNVLALSG------GDNKVTLWKENLE 286 (753)
T ss_dssp SCCSSCCCCEEECTTTCCEEEEC------SSSCEECCBCCSS
T ss_pred CCCCCceEEEEEcCCCCEEEEEc------CCCEEEEEecCCC
Confidence 24778899999999999999886 6899999998753
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=229.82 Aligned_cols=225 Identities=12% Similarity=0.147 Sum_probs=170.9
Q ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE--------EEEeeecccCC------------cceEEEEECCC
Q 017421 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--------IQKDILAKSLR------------WTVTDTSLSPD 180 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--------~~~~~~~~~~~------------~~v~~~~~~~~ 180 (372)
..+.+.|.+++|+|+|++||+|+.||.|+||++.++.. ........+|. ..|.+++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 34678999999999999999999999999999987642 11122345676 77999999999
Q ss_pred C--CEEEEEeCCCeEEEEECCCCceeeecceeecccc----------cce----------e----ccCCCCccccEEEEE
Q 017421 181 Q--RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDG----------LDF----------S----AADDGGYSFGIFSLK 234 (372)
Q Consensus 181 ~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~~----------~----~~~~~~h~~~i~~~~ 234 (372)
+ ..|++++.|+.|++||+.++.............+ +.+ . .....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 7999999999999999976543211000000000 000 0 000136888999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CeEEEE-------eecCCCCeEEEEEeCCCC-CEEEEEeCCCeEEEEeccccc--
Q 017421 235 FSTDGRELVAGSSDDCIYVYDLEA-NKLSLR-------ILAHTSDVNTVCFGDESG-HLIYSGSDDNLCKVNSVLLLT-- 303 (372)
Q Consensus 235 ~sp~~~~l~s~s~dg~i~iwd~~~-~~~~~~-------~~~~~~~v~~~~~sp~~~-~~l~s~~~dg~i~vwd~~~~~-- 303 (372)
|+|++++|++| .|+.|++||+++ ++.+.. +.+|...|++++|+ |++ ++|++|+.||.|++||++...
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 99999999998 799999999994 444442 45799999999999 777 999999999999999987422
Q ss_pred --------CCCC------------CeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc-ceEEEEEeeeE
Q 017421 304 --------RSIN------------PCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL-LRTFYSFMVHI 354 (372)
Q Consensus 304 --------~~~~------------~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~-~~~~~~~~~h~ 354 (372)
.+.. .|.+++|+|+|++|++++ ++.|++||+.+ ++.+..+.+|.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------~~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-------YLSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-------SSEEEEEETTCCSSCSCCEESCG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-------CCeEEEEeCCCCccccceeeccc
Confidence 3443 899999999999999885 38899999987 88888888774
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=227.25 Aligned_cols=233 Identities=12% Similarity=0.068 Sum_probs=185.8
Q ss_pred ccCCceeEeeeeeC---CCC--CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC---CCeEEEEe-------ee
Q 017421 100 SAADCCHMLSRYLP---VNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE---RGWKIQKD-------IL 164 (372)
Q Consensus 100 ~~~~~~~~~~~~~~---~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~-------~~ 164 (372)
.+.|..+++|+... ... .....+|...|.+++|+|++++|++|+.||.|++||+. .+...... ..
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 161 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKIN 161 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEE
Confidence 55677888998866 321 12223699999999999999999999999999999995 33222211 11
Q ss_pred ccc--CCcceEEEE--ECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC
Q 017421 165 AKS--LRWTVTDTS--LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (372)
Q Consensus 165 ~~~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 240 (372)
... +...+.++. +++++++|++++.|+.|++||+++++........ .|...|++++|+|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------~h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 162 LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS--------------PRHGAVSSICIDEECC 227 (437)
T ss_dssp GGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC--------------GGGCCEEEEEECTTSC
T ss_pred ccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC--------------CCCCceEEEEECCCCC
Confidence 111 445567776 6688999999999999999999998764443310 1567999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEee-cCCCCeEEEEEeC---CCCCEEEEEeCCCeEEEEeccccc-------------
Q 017421 241 ELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGD---ESGHLIYSGSDDNLCKVNSVLLLT------------- 303 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~sp---~~~~~l~s~~~dg~i~vwd~~~~~------------- 303 (372)
+|++|+.||.|++||+++++++..+. .|...|.+++|+| +++.+|++++.||.|++||+++..
T Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 307 (437)
T 3gre_A 228 VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPS 307 (437)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCC
T ss_pred EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCc
Confidence 99999999999999999999988886 7888999997774 568899999999999999997321
Q ss_pred -------------------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 304 -------------------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 304 -------------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|...|++++|+ ++++|++++ .|+.|++||+.+++....+.+|
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~------~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 308 MEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE------ATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp GGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG------GGTEEEEEETTCGGGCEEEECC
T ss_pred cceecccccccccceecccccCCceEEEEEC-CceEEEecC------CCCeEEEEECCCcccceEEecc
Confidence 166678999999 778888886 6999999999999988888876
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.1e-27 Score=250.63 Aligned_cols=212 Identities=21% Similarity=0.204 Sum_probs=180.1
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|.+.|++++|+|++++|++|+.||.|+|||+.++..+.. ..+|...|.+++|+|++++|++++.|+.|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD---IKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE---eccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 345678999999999999999999999999999999999876665 55888899999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 274 (372)
|+.+++...... +|...|.+++|+| ++.++++|+.|+.|++||+.+++++..+.+|...|++
T Consensus 685 d~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 685 DSATGKLVHTYD----------------EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp ETTTCCEEEEEE----------------CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred ECCCCceEEEEc----------------CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 999987654433 4777999999999 5568999999999999999999999999999999999
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeccccc---------------------------------------------------
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVLLLT--------------------------------------------------- 303 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------------------------------------------------- 303 (372)
++|+ |++++|++++.||.|++||++...
T Consensus 749 ~~~s-p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~ 827 (1249)
T 3sfz_A 749 CRFS-PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIH 827 (1249)
T ss_dssp EEEC-SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETT
T ss_pred EEEe-cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEec
Confidence 9999 899999999999999999986321
Q ss_pred ----------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421 304 ----------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 304 ----------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.|...|.+++|+|++++++++. .|+.|++|++.+++.+..+.+|.
T Consensus 828 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~~h~ 882 (1249)
T 3sfz_A 828 TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL------SQYCVELWNIDSRLKVADCRGHL 882 (1249)
T ss_dssp TCCEEEEEECSSSSCCCEEEECSSTTEEEEEC------SSSCEEEEETTTTEEEEEECCCS
T ss_pred CCCceeEEcCCCCCceEEEEEcCCCCEEEEEe------CCCeEEEEEcCCCceeeecCCCc
Confidence 2334445555555555555443 35789999999999999888873
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2.8e-27 Score=217.49 Aligned_cols=227 Identities=16% Similarity=0.147 Sum_probs=181.5
Q ss_pred ccCCceeEeeeeeCCCCCcccc-------------CCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeec
Q 017421 100 SAADCCHMLSRYLPVNGPWPVD-------------QTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 165 (372)
.+.+..+.+|+.........+. +|...|.+++|+| ++++|++++.||.|++||+.++......
T Consensus 62 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--- 138 (408)
T 4a11_B 62 GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--- 138 (408)
T ss_dssp EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE---
T ss_pred EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec---
Confidence 4556778899887766555443 5999999999999 7889999999999999999998665543
Q ss_pred ccCCcceEEEEECCC---CCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-E
Q 017421 166 KSLRWTVTDTSLSPD---QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-E 241 (372)
Q Consensus 166 ~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-~ 241 (372)
.+...+.++.|+|. +.++++++.++.|++||++++....... +|...|.+++|+|+++ +
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 139 -NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ----------------GHRQEILAVSWSPRYDYI 201 (408)
T ss_dssp -ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC----------------CCCSCEEEEEECSSCTTE
T ss_pred -cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec----------------CCCCcEEEEEECCCCCcE
Confidence 24557899999984 4599999999999999999876543332 4667999999999998 5
Q ss_pred EEEEeCCCeEEEEECCCCe-EEEEe---------------ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc---
Q 017421 242 LVAGSSDDCIYVYDLEANK-LSLRI---------------LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL--- 302 (372)
Q Consensus 242 l~s~s~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~--- 302 (372)
|++++.||.|++||++++. ++..+ ..|...|.+++|+ |++++|++++.||.|++||+++.
T Consensus 202 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 202 LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCCCEEEEecCCCeEEEEECCCCccc
Confidence 8999999999999998765 44444 4688899999999 89999999999999999998631
Q ss_pred --------------------------------------------------cCCCCCeeEEEeccCCCeEEEEeeeeEEEe
Q 017421 303 --------------------------------------------------TRSINPCNKYLFNPCNKYLIIYLILVISIY 332 (372)
Q Consensus 303 --------------------------------------------------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~ 332 (372)
..|...|++++|+|++++|++++ .
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------~ 354 (408)
T 4a11_B 281 LVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS------R 354 (408)
T ss_dssp CCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE------T
T ss_pred eeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC------C
Confidence 24778999999999999999886 6
Q ss_pred eceEEEeecccceEEEEEeee
Q 017421 333 SPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 333 d~~i~lw~~~~~~~~~~~~~h 353 (372)
|+.|++|++.+++.+.....+
T Consensus 355 dg~i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 355 DCNILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp TSCEEEEEECC----------
T ss_pred CCeEEEEeCCCCCccCCCCce
Confidence 999999999999887765443
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1.5e-27 Score=223.88 Aligned_cols=236 Identities=14% Similarity=0.132 Sum_probs=190.1
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC-
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS- 178 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 178 (372)
.+.+..+.+|+.........+.+|.+.|.+++|+|++ .|++|+.||+|++||+.++..+.. ..+|...|.+++|+
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV---FEGHNSTVRCLDIVE 213 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE---ECCCCCccEEEEEec
Confidence 5667788999988777777888999999999999988 899999999999999999876654 55788899999998
Q ss_pred -CCCCEEEEEeCCCeEEEEECCCCceeeecceeeccccccee-------ccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 179 -PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFS-------AADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 179 -~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
++++++++++.|+.|++||+.++.................. .....+|...+.++ +++++++++++.|+.
T Consensus 214 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~ 291 (464)
T 3v7d_B 214 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNT 291 (464)
T ss_dssp SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSC
T ss_pred CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCe
Confidence 57889999999999999999887643221111000000000 00113577788777 577899999999999
Q ss_pred EEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc------cccCCCCCeeEEEeccCCCeEEEE
Q 017421 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL------LLTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~------~~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|++||+++++++..+.+|...|.+++|+ +++++|++|+.||.|++||++ ++..|...|.++.|+ +.+|+++
T Consensus 292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEE
Confidence 9999999999999999999999999999 999999999999999999987 345889999999997 4677777
Q ss_pred eeeeEEEeeceEEEeecccceEEEEE
Q 017421 325 LILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 325 ~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+ .|+.|++||+.+++....+
T Consensus 369 s------~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 369 A------ADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp E------TTSEEEEEETTTCCEEEEE
T ss_pred e------CCCcEEEEECCCCceeeee
Confidence 5 6889999999887655444
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1.3e-27 Score=231.55 Aligned_cols=234 Identities=12% Similarity=0.027 Sum_probs=195.7
Q ss_pred cCCCCcc--ccCCceeEeeeeeCC----CCCccccCCCCc-eEEEEECC--CCCEEEEEeCCCcEEEEeCCCC------e
Q 017421 93 YSGRGRF--SAADCCHMLSRYLPV----NGPWPVDQTTSR-AYVSQFSA--DGSLFVAGFQASQIRIYDVERG------W 157 (372)
Q Consensus 93 ~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~-v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~------~ 157 (372)
+++++.+ .+.+..+.+|+.... .....+.+|... |.+++|+| ++++|++++.||.|+|||+.++ .
T Consensus 26 ~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 105 (615)
T 1pgu_A 26 YDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE 105 (615)
T ss_dssp EETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE
T ss_pred ECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc
Confidence 3444432 344667888888766 667788999999 99999999 9999999999999999999754 1
Q ss_pred EEEEeeecccCCcceEEEEECCCCCEEEEEeCC----CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEE
Q 017421 158 KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL 233 (372)
Q Consensus 158 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 233 (372)
.. .......|...|.+++|+|++++|++++.+ +.|++|| .++...... +|...|.++
T Consensus 106 ~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~----------------~~~~~v~~~ 166 (615)
T 1pgu_A 106 VN-VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS----------------GHSQRINAC 166 (615)
T ss_dssp EE-EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC----------------SCSSCEEEE
T ss_pred cc-ccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee----------------cCCccEEEE
Confidence 11 122345677889999999999999999987 6888888 333322221 477799999
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCC---CeEEEEEeCCC-CCEEEEEeCCCeEEEEeccc------c
Q 017421 234 KFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTS---DVNTVCFGDES-GHLIYSGSDDNLCKVNSVLL------L 302 (372)
Q Consensus 234 ~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~sp~~-~~~l~s~~~dg~i~vwd~~~------~ 302 (372)
+|+|+++ .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+ |+ +++|++++.|+.|++||+++ +
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 9999997 899999999999999999999999999999 99999999 78 99999999999999999863 3
Q ss_pred -c---CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 303 -T---RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 303 -~---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
. .|...|.+++|+ ++++|++++ .|+.|++||+.+++.+..+..|
T Consensus 246 ~~~~~~~~~~v~~~~~~-~~~~l~~~~------~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWL-DSQKFATVG------ADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp CBTTBCCCSCEEEEEES-SSSEEEEEE------TTSEEEEEETTTTEEEEEEECC
T ss_pred cccccccCCceEEEEEc-CCCEEEEEc------CCCcEEEEECCCCcEEEEEcCC
Confidence 3 788999999999 999999886 6899999999999998888766
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=5.6e-28 Score=217.21 Aligned_cols=223 Identities=12% Similarity=0.048 Sum_probs=186.2
Q ss_pred ccCCceeEeeeeeCCC---CCccccCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeC-CCCeEEEEeeeccc--CCcce
Q 017421 100 SAADCCHMLSRYLPVN---GPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDV-ERGWKIQKDILAKS--LRWTV 172 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~-~~~~~~~~~~~~~~--~~~~v 172 (372)
.+.+..+.+|+..... ....+.+|...|.+++|+|+++ +|++|+.||.|++|++ .++.. ..... |...|
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~~~~~~~~v 104 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF----QALTNNEANLGI 104 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE----EECBSCCCCSCE
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce----EeccccCCCCce
Confidence 4566788899887765 2455668999999999999999 9999999999999999 87743 22456 88899
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCC---------CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE
Q 017421 173 TDTSLSPDQRHLVYASMSPIVHIVDVGS---------GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV 243 (372)
Q Consensus 173 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~ 243 (372)
.+++|+| ++.|++++.|+.|++||+++ ++..... .|...|.+++|+|++ ++
T Consensus 105 ~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 105 CRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-----------------KVKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp EEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-----------------SSCCCEEEEEECSSE--EE
T ss_pred EEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE-----------------eeCCceEEEEecCCc--EE
Confidence 9999999 99999999999999999876 3322211 144589999999987 99
Q ss_pred EEeCCCeEEEEECCC-Ce--EEEEeecCCCCeEEEEEeCC-CCCEEEEEeCCCeEEEEecccc------------cCCCC
Q 017421 244 AGSSDDCIYVYDLEA-NK--LSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVNSVLLL------------TRSIN 307 (372)
Q Consensus 244 s~s~dg~i~iwd~~~-~~--~~~~~~~~~~~v~~~~~sp~-~~~~l~s~~~dg~i~vwd~~~~------------~~~~~ 307 (372)
+++.|+.|++||+++ +. .......|...|.+++|+ | ++++|++++.||.|++|+++.. ..|..
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 999999999999998 54 333445688899999999 8 9999999999999999998643 24433
Q ss_pred ---------CeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 308 ---------PCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 308 ---------~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|.+++|+|++++|++++ .|+.|++||+.+++.+..+.+|
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAG------SDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEE------TTSCEEEEETTTTEEEEECCCC
T ss_pred cccccccceeEEEEEEcCCCCEEEEec------CCceEEEEcCccHhHhhhhhcc
Confidence 899999999999999886 6899999999999999988887
No 89
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9e-29 Score=234.58 Aligned_cols=219 Identities=7% Similarity=0.007 Sum_probs=174.7
Q ss_pred ccCCceeEeeeeeCCCC-----------CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccC
Q 017421 100 SAADCCHMLSRYLPVNG-----------PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 168 (372)
.+.|..+++|+...... ...+.+|...|++++|++++ .|++|+.||+|++||+.++.... .....|
T Consensus 231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~--~~~~~H 307 (524)
T 2j04_B 231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPS--FYDQVH 307 (524)
T ss_dssp EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCS--EEEECS
T ss_pred EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCce--EEeecc
Confidence 55677889998764421 23567899999999999864 79999999999999998763221 124578
Q ss_pred CcceEEE--EECCCC-CEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCcc--ccEEEEEEcCCCCEEE
Q 017421 169 RWTVTDT--SLSPDQ-RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYS--FGIFSLKFSTDGRELV 243 (372)
Q Consensus 169 ~~~v~~~--~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~~~~sp~~~~l~ 243 (372)
...|.++ .|+|++ .+|++++.|++|++||+++++...... +|. ..|.+++|+|+++.++
T Consensus 308 ~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~----------------~~~~~~~v~~v~fsp~~~~l~ 371 (524)
T 2j04_B 308 DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV----------------SRFRGSNLVPVVYCPQIYSYI 371 (524)
T ss_dssp SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE----------------EECSCCSCCCEEEETTTTEEE
T ss_pred cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc----------------cccccCcccceEeCCCcCeEE
Confidence 8899999 578887 899999999999999998776432221 121 2478899999999999
Q ss_pred EEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc----------------------
Q 017421 244 AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL---------------------- 301 (372)
Q Consensus 244 s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~---------------------- 301 (372)
+++.|++|++||++++.++.++.+|...|++++|+ |++++|++|+.|++|++||+..
T Consensus 372 s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S-p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~ 450 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS-RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWD 450 (524)
T ss_dssp EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC-SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECB
T ss_pred EeCCCCcEEEEECcccccceeeecCCCceEEEEeC-CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEec
Confidence 99999999999999998888889999999999999 8999999999999999987420
Q ss_pred ----------------------------ccCCCCCeeEEEeccCCC---eEEEEeeeeEEEeeceEEEeecccc
Q 017421 302 ----------------------------LTRSINPCNKYLFNPCNK---YLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 302 ----------------------------~~~~~~~v~~~~~s~~g~---~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+.+|...|.+++|+|++. .+++++ .|+.|+||++.-.
T Consensus 451 ~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~------~~g~vrlw~l~~~ 518 (524)
T 2j04_B 451 YSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN------SAGLLTLEYLSLE 518 (524)
T ss_dssp CCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEEC------TTSEEEEEECSCC
T ss_pred cCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhc------cCceEEEEEcccc
Confidence 013556788899999854 788776 5788999987543
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.7e-28 Score=245.06 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=167.9
Q ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 200 (372)
.+|...|++++|+|++++||+|+.||.|+||+........ ...|..+|.+++|+| +++|++++.|+.|++||+.+
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~----~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI----KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE----ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE----EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 4789999999999999999999999999999998765433 234677899999999 88999999999999999998
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-----------EEeecCC
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS-----------LRILAHT 269 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~-----------~~~~~~~ 269 (372)
++...... |...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|.
T Consensus 89 ~~~~~~~~-----------------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 89 QKVLTTVF-----------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp CSEEEEEE-----------------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred CcEEEEEc-----------------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 87643332 2348999999999999999999999999999988753 1235688
Q ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------cC------------------CCCCeeEEEeccCCCeEEEEe
Q 017421 270 SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------TR------------------SINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~~------------------~~~~v~~~~~s~~g~~l~~~~ 325 (372)
..|++++|+|.++..|++|+.|+.| +||++.. .. |...|++++|+|+|++|++++
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 9999999994456899999999999 9998732 12 246799999999999999986
Q ss_pred eeeEEEeeceEEEeecccceEEE
Q 017421 326 ILVISIYSPNILLDNYFLLRTFY 348 (372)
Q Consensus 326 ~~~~~~~d~~i~lw~~~~~~~~~ 348 (372)
.|+.|++||+.+++.+.
T Consensus 231 ------~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 231 ------EDNSLVFWDANSGHMIM 247 (902)
T ss_dssp ------TTCCEEEEETTTCCEEE
T ss_pred ------CCCeEEEEECCCCcEEE
Confidence 68999999998887654
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.5e-27 Score=216.15 Aligned_cols=202 Identities=15% Similarity=0.105 Sum_probs=169.5
Q ss_pred ccCCCCceEEEEECCC----CCEEEEEeCCCcEEEEeCCCCeEEEEeee--cccCCcceEEEEECCC----CCEEEEEeC
Q 017421 120 VDQTTSRAYVSQFSAD----GSLFVAGFQASQIRIYDVERGWKIQKDIL--AKSLRWTVTDTSLSPD----QRHLVYASM 189 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~----~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~----~~~l~~~~~ 189 (372)
..+|...|++++|+|+ ...+++++.++.|++|++.++..+..... ...|...|.+++|+|+ +++|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3579999999999984 55667777778999999997755443322 2236678999999998 679999999
Q ss_pred CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEe---
Q 017421 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRI--- 265 (372)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~--- 265 (372)
||.|++||+.+++...... +|...|.+++|+| ++++|++++.||.|++||+++++.+..+
T Consensus 94 dg~i~v~d~~~~~~~~~~~----------------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYV----------------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp TCEEEEECTTTCCEEEEEE----------------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred CCEEEEEEchhceEeeeec----------------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 9999999999887644332 4677999999999 8999999999999999999999998888
Q ss_pred ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc----------------------------------CCCCCeeE
Q 017421 266 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT----------------------------------RSINPCNK 311 (372)
Q Consensus 266 ~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~----------------------------------~~~~~v~~ 311 (372)
..|...|.+++|+ |++++|++++.||.|++||++... .|...|.+
T Consensus 158 ~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 158 EGHRDEVLSADYD-LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred ccccCceeEEEEC-CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 6899999999999 899999999999999999997321 18899999
Q ss_pred EEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 312 YLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 312 ~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
++|+ ++++++++ .|+.|++||+.+++.
T Consensus 237 ~~~~--~~~l~~~~------~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 237 VRWL--GDLILSKS------CENAIVCWKPGKMED 263 (366)
T ss_dssp EEEE--TTEEEEEC------SSSEEEEEEESSTTC
T ss_pred EEEc--CCEEEEEe------cCCEEEEEeCCCccc
Confidence 9999 67888776 589999999887643
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=216.27 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=176.8
Q ss_pred CceeEeeeeeCCCCCcc-ccCCCCceEEEEECCC---CCEEEEEeCCCcEEEEeCCCCe-EEEEeeecccCCcceEEEE-
Q 017421 103 DCCHMLSRYLPVNGPWP-VDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTS- 176 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~- 176 (372)
+..+.+|+......... ..+|...|.+++|+|+ +++|++|+.||.|++||+.++. .+.. ..+|...|.++.
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS---VKGHKEIINAIDG 119 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE---ECCCSSCEEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE---EEecccceEEEee
Confidence 67788898876554333 3479999999999998 6999999999999999999875 3333 557888899995
Q ss_pred -----ECCCCCEEEEEeCCCeEEEEECCCCc-eeeecceeecccccceeccCCCCccccEEEEE----EcCCCCEEEEEe
Q 017421 177 -----LSPDQRHLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLK----FSTDGRELVAGS 246 (372)
Q Consensus 177 -----~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~----~sp~~~~l~s~s 246 (372)
|+|++++|++++.||.|++||++++. .......... .+...+.+++ |+|++++|++++
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG------------ENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT------------SCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC------------CCCCceEEEEEEeccCCCCCEEEEEc
Confidence 57899999999999999999999876 2222211110 1234788888 788999999999
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC---CCCEEEEEeCCCeEEEEecccc------c-----CCCCCeeEE
Q 017421 247 SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE---SGHLIYSGSDDNLCKVNSVLLL------T-----RSINPCNKY 312 (372)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~---~~~~l~s~~~dg~i~vwd~~~~------~-----~~~~~v~~~ 312 (372)
.|+.|++||+++++.... ..|...|.+++|+ | ++.+|++++.||.|++||++.. . .|...|+++
T Consensus 188 ~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~-~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~ 265 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWE-TNIKNGVCSLEFD-RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQV 265 (357)
T ss_dssp TTSEEEEEETTTTEEEEE-EECSSCEEEEEES-CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEE
T ss_pred cCCeEEEEECccCceeee-cCCCCceEEEEcC-CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEE
Confidence 999999999999987544 5688999999999 7 8999999999999999998732 2 788999999
Q ss_pred EeccCCC-eEEEEeeeeEEEeeceEEEeecccc
Q 017421 313 LFNPCNK-YLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 313 ~~s~~g~-~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+|+|+++ ++++++ .|+.|++||+.++
T Consensus 266 ~~~~~~~~~l~~~~------~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 266 RHLPQNRELFLTAG------GAGGLHLWKYEYP 292 (357)
T ss_dssp EEETTEEEEEEEEE------TTSEEEEEEEECC
T ss_pred EECCCCCcEEEEEe------CCCcEEEeecCCC
Confidence 9999998 677775 6899999998864
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-27 Score=210.91 Aligned_cols=224 Identities=11% Similarity=0.014 Sum_probs=185.8
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+..|...|.+++|+|++++|++++.||.|++|++..............|...|.++.|
T Consensus 35 ~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 112 (313)
T 3odt_A 35 VSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-- 112 (313)
T ss_dssp EETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--
T ss_pred EEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--
Confidence 556677889998777667778899999999999999999999999999999998765322223335678889999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEA 258 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg~i~iwd~~~ 258 (372)
+++++++++.||.|++|| .+....... +|...+.++.|+| +++++++++.|+.|++|| .
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~ 172 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQ----------------AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--N 172 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEE----------------CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--T
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEecc----------------cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--c
Confidence 678999999999999999 333322221 3667999999988 899999999999999999 4
Q ss_pred CeEEEEeec-CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 259 NKLSLRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 259 ~~~~~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
.+....+.. |...+.+++|+ +++. +++++.|+.|++||+++ +..|...|++++|+|++. |++++
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~------ 243 (313)
T 3odt_A 173 DKVIKTFSGIHNDVVRHLAVV-DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG------ 243 (313)
T ss_dssp TEEEEEECSSCSSCEEEEEEE-ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEE------
T ss_pred CceEEEEeccCcccEEEEEEc-CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEe------
Confidence 566667776 89999999999 8887 99999999999999973 347889999999999995 55554
Q ss_pred eeceEEEeecccceEEEEEeeeE
Q 017421 332 YSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 332 ~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.|+.|++||+.+++.+..+..|.
T Consensus 244 ~dg~v~iwd~~~~~~~~~~~~~~ 266 (313)
T 3odt_A 244 EDRTVRIWSKENGSLKQVITLPA 266 (313)
T ss_dssp TTSEEEEECTTTCCEEEEEECSS
T ss_pred cCCEEEEEECCCCceeEEEeccC
Confidence 68999999999999998887774
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=221.97 Aligned_cols=212 Identities=12% Similarity=0.071 Sum_probs=171.9
Q ss_pred cCCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCC--CCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 121 DQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVE--RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
.+|.+.|++++|+|++++| ++++.||.|+||++. ++..+.... ...+...|.+++|+|++++|++++.+|.|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-RFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 3566789999999999996 889999999999998 665554422 235566899999999999999999999999999
Q ss_pred CCCCceee-ecceeecccccceeccCCCCccccEEEEEEcCC---CCEEEEEeCCCeEEEEECCCCeEEEE-eecCCCCe
Q 017421 198 VGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDV 272 (372)
Q Consensus 198 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~v 272 (372)
+.++.... ...... +|...|++++|+|+ +++|++++.|+.|++||+++++.+.. +.+|...|
T Consensus 178 ~~~~~~~~~~~~~~~-------------~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 178 INSIPEEKFTQEPIL-------------GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp TTSCCCSSCCCCCSE-------------ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred cCCcccccccceeee-------------cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce
Confidence 98876532 111111 46679999999999 99999999999999999999988777 55899999
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------------------------------CCCCCeeEEEeccCCCeE
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------------------------------RSINPCNKYLFNPCNKYL 321 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------------------------------~~~~~v~~~~~s~~g~~l 321 (372)
.+++|+ ++++|++++.|+.|++||+++.+ .....|..++|+|++++|
T Consensus 245 ~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 245 SSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 999998 89999999999999999987432 123568999999999999
Q ss_pred EEEeeeeEEEeeceEEEeec--ccc---eEEEEEeee
Q 017421 322 IIYLILVISIYSPNILLDNY--FLL---RTFYSFMVH 353 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~--~~~---~~~~~~~~h 353 (372)
+++.. .|+.|++|++ .++ +.+..+.+|
T Consensus 323 ~~~~~-----~d~~i~iw~~~~~~~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 323 AFFVE-----ATKCIIILEMSEKQKGDLALKQIITFP 354 (450)
T ss_dssp EEEET-----TCSEEEEEEECSSSTTCEEEEEEEECS
T ss_pred EEEEC-----CCCeEEEEEeccCCCCceeeccEeccC
Confidence 98842 3788999998 555 555555544
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.6e-27 Score=208.35 Aligned_cols=210 Identities=13% Similarity=0.083 Sum_probs=177.6
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
...+.+|.+.|.+++| |++++|++++.||.|++||+.++..... ...|...|.+++|+|++++|++++.||.|++|
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTV---VYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEE---EEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEE---eecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3457889999999999 9999999999999999999988765544 44667789999999999999999999999999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
++............. +|...|.+++| +++++++++.|+.|++|| .++....+..|...+.+++
T Consensus 87 ~~~~~~~~~~~~~~~-------------~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~ 149 (313)
T 3odt_A 87 PLFATSGEDPLYTLI-------------GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAK 149 (313)
T ss_dssp ETTCCTTSCC-CEEC-------------CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEE
T ss_pred EeeecCCCCcccchh-------------hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEE
Confidence 997654222111111 46779999999 577999999999999999 6778888889999999999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEeccc----ccC-CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLL----LTR-SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~----~~~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
|+|++++++++++.|+.|++||... +.. +...+.+++|+|++. +++++ .|+.|++||+.+++.+..+.
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~------~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS------NDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEE------TTSEEEEEETTTCCEEEEEE
T ss_pred EccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEcc------CCCeEEEEECCchhhhhhhh
Confidence 9966999999999999999999752 233 888999999999999 55554 68999999999999999888
Q ss_pred eeE
Q 017421 352 VHI 354 (372)
Q Consensus 352 ~h~ 354 (372)
+|.
T Consensus 223 ~~~ 225 (313)
T 3odt_A 223 GHE 225 (313)
T ss_dssp CCS
T ss_pred cCC
Confidence 773
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.5e-27 Score=247.89 Aligned_cols=213 Identities=15% Similarity=0.160 Sum_probs=181.6
Q ss_pred cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC
Q 017421 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
+++++.+ .+.+..+.+|+.........+.+|...|.+++|+|++++|++++.|+.|+|||+.++..+.. ..+|.
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~---~~~~~ 699 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT---YDEHS 699 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE---EcCCC
Confidence 4555543 45667888999888887888899999999999999999999999999999999999877665 45788
Q ss_pred cceEEEEECC--CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC
Q 017421 170 WTVTDTSLSP--DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (372)
Q Consensus 170 ~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~ 247 (372)
..|.++.|+| ++..+++++.|+.|++||+.++....... +|...|++++|+|++++|++++.
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~----------------~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF----------------GHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC----------------CCSSCEEEEEECSSTTEEEEEES
T ss_pred CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec----------------CCCCCEEEEEEecCCCEEEEEEC
Confidence 8999999999 55689999999999999999987644332 57789999999999999999999
Q ss_pred CCeEEEEECCCCeEEEEee-------------------------------------------------------cCCCCe
Q 017421 248 DDCIYVYDLEANKLSLRIL-------------------------------------------------------AHTSDV 272 (372)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~-------------------------------------------------------~~~~~v 272 (372)
||.|++||+.+++....+. +|...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 9999999998775443321 567788
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEe
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
.+++|+ |+++++++++.|+.|++||+.+ +.+|...|.+++|+|+|+++++++
T Consensus 844 ~~~~~s-p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 844 QYCDFS-PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp CEEEEC-SSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 999999 8999999999999999999873 457889999999999999888775
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=237.46 Aligned_cols=207 Identities=17% Similarity=0.117 Sum_probs=172.0
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC--CCEEEEEeCCCeEEE
Q 017421 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHI 195 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v 195 (372)
..+.+|.+.|++++|+|++++|++|+.||.|+||++..+.. .......+|..+|++++|+|+ +++|++++.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 35689999999999999999999999999999999985432 222336688889999999998 999999999999999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC--CCEEEEEeCCCeEEEEECCCC--eEEEEeecCCCC
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEAN--KLSLRILAHTSD 271 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~ 271 (372)
||+.++......... +|...|.+++|+|+ ++++++|+.||.|++||++++ .....+.+|...
T Consensus 82 wd~~~~~~~~~~~~~--------------~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 82 WKEENGRWSQIAVHA--------------VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEETTEEEEEEEEC--------------CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EECCCCccccccccc--------------CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 999987632222211 47779999999999 999999999999999999887 344566789999
Q ss_pred eEEEEEeCC------------CCCEEEEEeCCCeEEEEeccc----------ccCCCCCeeEEEeccC---CCeEEEEee
Q 017421 272 VNTVCFGDE------------SGHLIYSGSDDNLCKVNSVLL----------LTRSINPCNKYLFNPC---NKYLIIYLI 326 (372)
Q Consensus 272 v~~~~~sp~------------~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~v~~~~~s~~---g~~l~~~~~ 326 (372)
|.+++|+|. ++.+|++|+.||.|++||++. +..|...|++++|+|+ ++++++++
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s- 226 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS- 226 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe-
Confidence 999999932 689999999999999999863 3478899999999999 89998886
Q ss_pred eeEEEeeceEEEeecccce
Q 017421 327 LVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~~~~ 345 (372)
.|+.|++||+.+++
T Consensus 227 -----~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 227 -----QDRTCIIWTQDNEQ 240 (753)
T ss_dssp -----SSSCEEEEEESSSS
T ss_pred -----cCCEEEEecCCCCC
Confidence 68999999998863
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=3.8e-27 Score=221.15 Aligned_cols=222 Identities=13% Similarity=0.102 Sum_probs=188.4
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEEC--CCCCEEEEEeCCCcEEEEeCCCCeEEEE----------------
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFS--ADGSLFVAGFQASQIRIYDVERGWKIQK---------------- 161 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~---------------- 161 (372)
.+.|..+.+|+.........+.+|...|.+++|+ +++++|++|+.|+.|++||+.++.....
T Consensus 179 ~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 5666788899988777777888999999999998 5789999999999999999987643221
Q ss_pred ----eeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC
Q 017421 162 ----DILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST 237 (372)
Q Consensus 162 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 237 (372)
.....+|...+.++ +++++++++++.||.|++||+.+++...... +|...|.+++|+|
T Consensus 259 ~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~----------------~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS----------------GHTDRIYSTIYDH 320 (464)
T ss_dssp CTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEEET
T ss_pred CeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec----------------CCCCCEEEEEEcC
Confidence 22345676677766 5788999999999999999999887644332 4677999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEE
Q 017421 238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKY 312 (372)
Q Consensus 238 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~ 312 (372)
+++++++|+.||.|++||+++++++..+.+|...|.+++|+ +.+|++++.||.|++||++... .+...+..+
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 397 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 397 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEE
Confidence 99999999999999999999999999999999999999997 4799999999999999998533 466678889
Q ss_pred EeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421 313 LFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 313 ~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
+|+|+++++++++ |+.|++||+.+++.+..
T Consensus 398 ~~~~~~~~l~~~~-------dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 398 TFYVSDNILVSGS-------ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEECSSEEEEEE-------TTEEEEEETTTCCEEES
T ss_pred EEEeCCCEEEEec-------CCeEEEEECCCCcEEeh
Confidence 9999999999883 78899999999988764
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7.3e-28 Score=216.45 Aligned_cols=206 Identities=13% Similarity=0.085 Sum_probs=174.2
Q ss_pred ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCC-EEEEEeCCCeEEEEEC
Q 017421 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDV 198 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~ 198 (372)
..+|.+.|.+++|+|++++|++++.|+.|+||++.++...........|...|.+++|+|+++ +|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 357999999999999999999999999999999987752112222447788999999999999 9999999999999999
Q ss_pred -CCCceeeecceeecccccceeccCCCC--ccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CeEEEEee
Q 017421 199 -GSGTMESLANVTEIHDGLDFSAADDGG--YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---------NKLSLRIL 266 (372)
Q Consensus 199 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~ 266 (372)
.++...... + |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.
T Consensus 87 ~~~~~~~~~~-----------------~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 87 IGSPSFQALT-----------------NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SSSSSEEECB-----------------SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred ccCCceEecc-----------------ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 877542111 3 667999999999 99999999999999999987 66666665
Q ss_pred cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-cc--------CCCCCeeEEEecc-CCCeEEEEeeeeEEEeeceE
Q 017421 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-LT--------RSINPCNKYLFNP-CNKYLIIYLILVISIYSPNI 336 (372)
Q Consensus 267 ~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-~~--------~~~~~v~~~~~s~-~g~~l~~~~~~~~~~~d~~i 336 (372)
|...|.+++|+ +++ +++++.|+.|++||++. .. .+...+.+++|+| +++++++++ .|+.+
T Consensus 149 -~~~~v~~~~~~-~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~------~dg~i 218 (342)
T 1yfq_A 149 -VKNKIFTMDTN-SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS------IDGRV 218 (342)
T ss_dssp -SCCCEEEEEEC-SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE------TTSEE
T ss_pred -eCCceEEEEec-CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe------cCCcE
Confidence 88999999999 666 99999999999999986 32 4677899999999 999999886 58999
Q ss_pred EEeecccc------eEEEEEeee
Q 017421 337 LLDNYFLL------RTFYSFMVH 353 (372)
Q Consensus 337 ~lw~~~~~------~~~~~~~~h 353 (372)
++|++... +....+..|
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECC
T ss_pred EEEEEcCCCcccccccceeeecc
Confidence 99999887 677777776
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-27 Score=214.70 Aligned_cols=216 Identities=10% Similarity=0.051 Sum_probs=168.5
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC---------CeEEEEeeecccCCc
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER---------GWKIQKDILAKSLRW 170 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~ 170 (372)
.+.|..+.+|+.........+. ...|.++.|+|+ +++++.|++|++|+... +..+.. ...+|..
T Consensus 54 g~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~ 126 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE--IEVDSAN 126 (343)
T ss_dssp EEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE--EECCCSS
T ss_pred ECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE--eecCCCC
Confidence 5567788899887766554444 466778889988 99999999999997763 322222 1235567
Q ss_pred ceEEEEECC--CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC
Q 017421 171 TVTDTSLSP--DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (372)
Q Consensus 171 ~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d 248 (372)
+|.+++|+| +++++++++.||.|++||+++++....... .|...+.+++|+|++.+|++|+.|
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---------------~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---------------KSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---------------CSSCCCCEEEECTTSCEEEEECTT
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---------------CCCCceEEEEECCCCCEEEEEcCC
Confidence 899999999 999999999999999999998876332211 234479999999999999999999
Q ss_pred CeEEEEECCCCeEE-EEeec-CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccccC---------CCCCee--EEEec
Q 017421 249 DCIYVYDLEANKLS-LRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLTR---------SINPCN--KYLFN 315 (372)
Q Consensus 249 g~i~iwd~~~~~~~-~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~---------~~~~v~--~~~~s 315 (372)
|.|++||+++++.+ ..+.. |..+|++++|+ |++.+|++++ |+.|++||++.... +...+. +++|+
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs-~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFA-DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEEC-TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEe-CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 99999999999877 77887 99999999999 9999999999 55999999985431 223444 59999
Q ss_pred cCCCeEEEEeeeeEEEe-eceEEEeecccce
Q 017421 316 PCNKYLIIYLILVISIY-SPNILLDNYFLLR 345 (372)
Q Consensus 316 ~~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~ 345 (372)
|+|++|++++ - |+.+++|++....
T Consensus 270 ~~g~~l~~~s------~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 270 DSGKNMIAYS------NESNSLTIYKFDKKT 294 (343)
T ss_dssp TTSSEEEEEE------TTTTEEEEEEECTTT
T ss_pred CCCCEEEEec------CCCCcEEEEEEcccc
Confidence 9999999875 3 6777888775543
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=4.4e-27 Score=216.77 Aligned_cols=222 Identities=13% Similarity=0.101 Sum_probs=179.8
Q ss_pred ccCCceeEeeeeeCC-------CCCccccCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcc
Q 017421 100 SAADCCHMLSRYLPV-------NGPWPVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWT 171 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 171 (372)
.+.|..+.+|+.... .....+.+|...|.+++|+|++ ++|++++.|+.|+|||+.++..+.... ...|...
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~ 178 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-PDVHPDT 178 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-TTTCCSC
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-cCCCCCc
Confidence 455677889998776 4456778999999999999998 699999999999999999986655421 1568889
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCcccc-EEEEEEcCCCCEEEEE---eC
Q 017421 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFG-IFSLKFSTDGRELVAG---SS 247 (372)
Q Consensus 172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~sp~~~~l~s~---s~ 247 (372)
|.+++|+|++++|++++.||.|++||+++++...... . +|... +.++.|+|++++|++| +.
T Consensus 179 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD--R-------------PHEGTRPVHAVFVSEGKILTTGFSRMS 243 (402)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--C-------------SSCSSSCCEEEECSTTEEEEEEECTTC
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec--c-------------CCCCCcceEEEEcCCCcEEEEeccCCC
Confidence 9999999999999999999999999999887643331 1 23333 8899999999999999 78
Q ss_pred CCeEEEEECCCCeE-EEEee-cCCCCeEEEEEeCCCCCEEEE-EeCCCeEEEEeccccc---------CCCCCeeEEEec
Q 017421 248 DDCIYVYDLEANKL-SLRIL-AHTSDVNTVCFGDESGHLIYS-GSDDNLCKVNSVLLLT---------RSINPCNKYLFN 315 (372)
Q Consensus 248 dg~i~iwd~~~~~~-~~~~~-~~~~~v~~~~~sp~~~~~l~s-~~~dg~i~vwd~~~~~---------~~~~~v~~~~~s 315 (372)
|+.|++||+++++. +.... .|...+.+++|+ |++++|++ ++.|+.|++||+.... .+..+|.+++|+
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD-PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE-TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEc-CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 99999999998654 33332 477889999999 88988865 5579999999997432 245889999999
Q ss_pred cCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 316 PCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 316 ~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
|++.+++++ +..+++|++.+++.
T Consensus 323 p~~~~~~s~--------~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 323 PKRGLEVNK--------CEIARFYKLHERKC 345 (402)
T ss_dssp CGGGSCGGG--------TEEEEEEEEETTEE
T ss_pred cccccceec--------ceeEEEEEcCCCcE
Confidence 999988754 55789999988764
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.6e-26 Score=215.39 Aligned_cols=222 Identities=18% Similarity=0.202 Sum_probs=190.0
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+.+|...|.+++| ++++|++|+.||.|++||+.+++.+.. ...|...|.++.|++
T Consensus 149 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT---LIHHCEAVLHLRFNN 223 (435)
T ss_dssp EESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE---ECCCCSCEEEEECCT
T ss_pred EeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE---EcCCCCcEEEEEEcC
Confidence 556778889998877777888999999999999 789999999999999999999876655 557888999999974
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
..+++++.||.|++||+.++.......... +|...|.+++| ++++|++|+.||.|++||++++
T Consensus 224 --~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-------------~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~ 286 (435)
T 1p22_A 224 --GMMVTCSKDRSIAVWDMASPTDITLRRVLV-------------GHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC 286 (435)
T ss_dssp --TEEEEEETTSCEEEEECSSSSCCEEEEEEC-------------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC
T ss_pred --CEEEEeeCCCcEEEEeCCCCCCceeeeEec-------------CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC
Confidence 599999999999999998876542222221 47779999999 6789999999999999999999
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
+.+..+.+|...|.+++|+ ++++++|+.||.|++||+++ +..|...|.+++| ++.+|++++ .|
T Consensus 287 ~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~------~d 355 (435)
T 1p22_A 287 EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA------YD 355 (435)
T ss_dssp CEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEE------TT
T ss_pred cEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEe------CC
Confidence 9999999999999999995 57999999999999999973 4478899999999 778888886 69
Q ss_pred ceEEEeecccce---------EEEEEeeeE
Q 017421 334 PNILLDNYFLLR---------TFYSFMVHI 354 (372)
Q Consensus 334 ~~i~lw~~~~~~---------~~~~~~~h~ 354 (372)
+.|++||+.+++ .+..+.+|.
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~ 385 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHS 385 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCS
T ss_pred CcEEEEECCCCCCccccccchheeeccCCC
Confidence 999999998887 777777763
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.3e-27 Score=220.66 Aligned_cols=208 Identities=15% Similarity=0.170 Sum_probs=167.7
Q ss_pred cccCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCC-------eEEEEeeecccCCcceEEEEECCCCC-EEEEEeC
Q 017421 119 PVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERG-------WKIQKDILAKSLRWTVTDTSLSPDQR-HLVYASM 189 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 189 (372)
....|.+.|++++|+|+ +++|++++.+|.|+||++... ..........+|...|.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34679999999999997 788999999999999999761 01122223557888999999999988 9999999
Q ss_pred CCeEEEEECCCCceeeec-ceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC---eEEEE
Q 017421 190 SPIVHIVDVGSGTMESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEAN---KLSLR 264 (372)
Q Consensus 190 dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~---~~~~~ 264 (372)
||.|++||+..+...... ..... + .+|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~-----~-----~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNI-----F-----TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEE-----E-----CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CCeEEEEeCCCCCCCCceecccee-----e-----cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 999999999875321110 00000 0 14777999999999 6789999999999999999987 57777
Q ss_pred eecCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEeccc-------ccCCCCCeeEEEeccCCCe-EEEEeeeeEEEeece
Q 017421 265 ILAHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLL-------LTRSINPCNKYLFNPCNKY-LIIYLILVISIYSPN 335 (372)
Q Consensus 265 ~~~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~-------~~~~~~~v~~~~~s~~g~~-l~~~~~~~~~~~d~~ 335 (372)
+..|...|++++|+ |++. +|++|+.||.|++||++. +..|...|++++|+|+++. |++++ .|+.
T Consensus 273 ~~~~~~~v~~i~~~-p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~------~d~~ 345 (430)
T 2xyi_A 273 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG------TDRR 345 (430)
T ss_dssp EECCSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE------TTSC
T ss_pred eecCCCCeEEEEeC-CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe------CCCc
Confidence 88899999999999 6665 799999999999999984 2368899999999999964 55554 6899
Q ss_pred EEEeeccc
Q 017421 336 ILLDNYFL 343 (372)
Q Consensus 336 i~lw~~~~ 343 (372)
|++||+..
T Consensus 346 i~iwd~~~ 353 (430)
T 2xyi_A 346 LHVWDLSK 353 (430)
T ss_dssp CEEEEGGG
T ss_pred EEEEeCCC
Confidence 99999987
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.5e-27 Score=219.44 Aligned_cols=228 Identities=11% Similarity=0.031 Sum_probs=157.2
Q ss_pred ccCCceeEeeeeeCCCC-----CccccCCCCceEEEEECC--------CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc
Q 017421 100 SAADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSA--------DGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 166 (372)
.+.|..+++|+...... ...+.+|.+.|++++|+| |+++||+|+.|++|+|||+.++..+.. ..
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~---~~ 183 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA---GY 183 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE---EE
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee---ec
Confidence 56678899998776542 235789999999999998 889999999999999999988766554 44
Q ss_pred cCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceeeecce-eecccccceec--------cCCCCccccEEEEEEc
Q 017421 167 SLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANV-TEIHDGLDFSA--------ADDGGYSFGIFSLKFS 236 (372)
Q Consensus 167 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~h~~~i~~~~~s 236 (372)
.|..+|.+++|+|++. +|++++.|+.|++||+++++....... ........+.. ....+|...+.++.|+
T Consensus 184 ~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 184 PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI 263 (393)
T ss_dssp ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEE
T ss_pred CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeee
Confidence 6667899999999874 799999999999999998765322211 01111111111 1124678889999987
Q ss_pred -CCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEE------------------EEEeCC-CCCEEEEEeCCCeEEE
Q 017421 237 -TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT------------------VCFGDE-SGHLIYSGSDDNLCKV 296 (372)
Q Consensus 237 -p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~------------------~~~sp~-~~~~l~s~~~dg~i~v 296 (372)
|+++.|++++.|+++++||+..++....+..|...+.. ..|+|+ ++.++++|+.||.|++
T Consensus 264 ~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~l 343 (393)
T 4gq1_A 264 GSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQL 343 (393)
T ss_dssp TTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEE
T ss_pred cCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEE
Confidence 79999999999999999999887766655554443333 234433 4446677889999999
Q ss_pred Eecccc------cCCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 297 NSVLLL------TRSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 297 wd~~~~------~~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
||+.+. ..|..+|.+++|+|||++||+++++.+.
T Consensus 344 wd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 344 INTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp EETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred EECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 998743 3677899999999999999999744333
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1e-26 Score=210.59 Aligned_cols=238 Identities=13% Similarity=0.041 Sum_probs=179.0
Q ss_pred ccCCceeEeeeeeCCCCC--ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421 100 SAADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (372)
.+.+..+.+|+....... ..+.+|...|.+++|+|++++|++++.||.|++||+.++.... ...|...|.++.|
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ----IAQHDAPVKTIHW 135 (368)
T ss_dssp EETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEE
T ss_pred ECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee----eccccCceEEEEE
Confidence 455677889998763333 5678899999999999999999999999999999999886544 3457788999999
Q ss_pred --CCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccc-----------------eecc--------CCCCccccE
Q 017421 178 --SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLD-----------------FSAA--------DDGGYSFGI 230 (372)
Q Consensus 178 --~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-----------------~~~~--------~~~~h~~~i 230 (372)
+|++++|++++.||.|++||+++++............... +... ....+...+
T Consensus 136 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215 (368)
T ss_dssp EECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred EeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence 9999999999999999999999887543332211000000 0000 001223355
Q ss_pred EEEEEcCCCCE----EEEEeCCCeEEEEECCCC---eEEEEeecCCC------------CeEEEEEeCCCCCEEEEEeCC
Q 017421 231 FSLKFSTDGRE----LVAGSSDDCIYVYDLEAN---KLSLRILAHTS------------DVNTVCFGDESGHLIYSGSDD 291 (372)
Q Consensus 231 ~~~~~sp~~~~----l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~------------~v~~~~~sp~~~~~l~s~~~d 291 (372)
.++.+.++... +++++.||.|++||++.. .....+..|.. .|++++|+ |++++|++++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~s~~~d 294 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH-PVHGTLATVGSD 294 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC-TTTCCEEEEETT
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe-cCCCEEEEEccC
Confidence 66666555443 999999999999999987 55667777765 79999999 899999999999
Q ss_pred CeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 292 NLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 292 g~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
|.|++||+++ +..|..+|.+++|+|+|++|++++... |...+.+|+....+
T Consensus 295 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~---~~~~~~~~~~~~~~ 351 (368)
T 3mmy_A 295 GRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD---WSKGHEFYNPQKKN 351 (368)
T ss_dssp SCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC---STTCGGGCCTTSCC
T ss_pred CeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc---ccccccccCCCccc
Confidence 9999999973 447889999999999999999886321 33444455554443
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=4.8e-27 Score=213.80 Aligned_cols=193 Identities=18% Similarity=0.211 Sum_probs=154.9
Q ss_pred ccCCCCcc-----ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc
Q 017421 92 NYSGRGRF-----SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (372)
Q Consensus 92 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 166 (372)
.|++++.+ .+.+..+++|+.........+ .|...|++++|+|||++|++++.+ .+.+|+..++..+... ...
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~-~~~ 216 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK-TDF 216 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE-CCC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee-ecC
Confidence 46777765 224567889987666555444 477889999999999999999865 5667777766554432 345
Q ss_pred cCCcceEEEEECCCCCEEEEEeCCC----eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE
Q 017421 167 SLRWTVTDTSLSPDQRHLVYASMSP----IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (372)
Q Consensus 167 ~~~~~v~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l 242 (372)
.|...|.+++|+|+++.+++++.++ .+++|++............. .+|...|++++|+|||++|
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~------------~~~~~~V~~~~~Spdg~~l 284 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV------------TNRFKGITSMDVDMKGELA 284 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE------------ESSCSCEEEEEECTTSCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee------------cCCCCCeEeEEECCCCCce
Confidence 6778899999999999999998877 68889987765432221111 1466799999999999999
Q ss_pred EEEeCCCeEEEEECCCCeEEEEe-ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 243 VAGSSDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 243 ~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
|+|+.|++|+|||+++++++..+ .+|...|++++|+ |||++|++|+.|++|+|||+.
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS-pdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS-PDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC-TTSCEEEEEETTSEEEEEECC
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC-CCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999999999998875 6899999999999 999999999999999999986
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.1e-27 Score=217.73 Aligned_cols=199 Identities=10% Similarity=0.062 Sum_probs=154.7
Q ss_pred eEeeeeeCCCCCcccc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc-----ceEEEEECC
Q 017421 106 HMLSRYLPVNGPWPVD-QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-----TVTDTSLSP 179 (372)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~ 179 (372)
...|.++..+....+. .|...|.+++|||+|++||+++.||.|+||+.+. .+.. .. |.. .+.+++|+|
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~---l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 66 ENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTN---LD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp CCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEE---CC-CSSCSTTTCEEEEEECS
T ss_pred cceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeee---cc-CCCccccccEEEEEEcC
Confidence 3444455444433443 5688999999999999999999999999999644 2222 22 332 599999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeee----cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEE
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESL----ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd 255 (372)
||++|++|+.||+|++||+.++..... ......+ ..+|...|.+++|+||| +++++.|++|++||
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~---------~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS---------DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS---------CTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc---------cccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 999999999999999999998753110 0111100 11577899999999999 88889999999999
Q ss_pred CCCCeE---EEEe-ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-----cc-CCCCCeeEEEe--ccCCCeEEE
Q 017421 256 LEANKL---SLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-----LT-RSINPCNKYLF--NPCNKYLII 323 (372)
Q Consensus 256 ~~~~~~---~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----~~-~~~~~v~~~~~--s~~g~~l~~ 323 (372)
+..+.. ..++ .+|...|.+++|+ |+.|++++ ++.|++||+.. .. +|...|+.++| +|+++.|++
T Consensus 209 ~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~ 284 (588)
T 2j04_A 209 VSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLM 284 (588)
T ss_dssp CCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEE
T ss_pred CCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEE
Confidence 988773 3556 4788899999998 58899887 69999999872 22 79999999999 999999998
Q ss_pred Ee
Q 017421 324 YL 325 (372)
Q Consensus 324 ~~ 325 (372)
+.
T Consensus 285 a~ 286 (588)
T 2j04_A 285 SN 286 (588)
T ss_dssp CS
T ss_pred Ec
Confidence 85
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-26 Score=215.55 Aligned_cols=206 Identities=16% Similarity=0.084 Sum_probs=168.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCe---EEEEeeec------------------------------------
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGW---KIQKDILA------------------------------------ 165 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~------------------------------------ 165 (372)
.++.+++|+|+|++|+++ .++.|++||+.+++ .+......
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899999999966665 56899999998886 33221100
Q ss_pred ---------------ccCCcceEEEEECCCCCEE-EEEeCCCeEEEEECC--CCceeeecceeecccccceeccCCCCcc
Q 017421 166 ---------------KSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVG--SGTMESLANVTEIHDGLDFSAADDGGYS 227 (372)
Q Consensus 166 ---------------~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 227 (372)
.+|...|.+++|+|++++| ++++.||.|++||+. ++......... .|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------~~~ 149 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF--------------CFS 149 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE--------------ECS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc--------------cCC
Confidence 1233469999999999996 888899999999998 66654333211 244
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE----EeecCCCCeEEEEEeCCC---CCEEEEEeCCCeEEEEecc
Q 017421 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL----RILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 228 ~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~vwd~~ 300 (372)
..|++++|+|++++|++++.+|.|++|++.+++... .+.+|...|++++|+ |+ +++|++++.|+.|++||++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI-KDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE-ECTTSCEEEEEEETTSCEEEEEES
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEc-CCCCCCcEEEEEcCCCcEEEEECC
Confidence 589999999999999999999999999998876543 677899999999999 88 8999999999999999987
Q ss_pred c-------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 301 L-------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 301 ~-------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+ ..+|...|.+++|+ ++++|++++ .|+.|++||+.+++.+..+..+
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~------~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG------GDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEE------SSSEEEEEETTTCCEEEEEECH
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEe------CCCeEEEEECCCCcEeeeecch
Confidence 3 33788999999999 999999886 6899999999999988888643
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.6e-26 Score=202.89 Aligned_cols=192 Identities=11% Similarity=0.043 Sum_probs=136.4
Q ss_pred CceEEEEECCC----CCEEEEEeC--------------------CCcEEEEeCCC-CeEEEEeeecccCCcceEEEEECC
Q 017421 125 SRAYVSQFSAD----GSLFVAGFQ--------------------ASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 125 ~~v~~~~~s~~----~~~l~~~~~--------------------dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
..|+.++|+|| ++.+++++. |+.|++|++.. ++.+.. ...|...+..++|+|
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s---~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKEN---QFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEE---EEECCCSSCEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeee---eccCCCceeeEEeec
Confidence 36778888888 777777653 66677777733 433332 224555667777777
Q ss_pred ---CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE------------EE
Q 017421 180 ---DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL------------VA 244 (372)
Q Consensus 180 ---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l------------~s 244 (372)
++..|++++.|++|++||++++++...... + ..+...+.+++|+|+|.++ ++
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g---~----------~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI---D----------DSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEEC---C----------C---CCCEEEEEEETTEEEEEEC----------
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcC---C----------CcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 668899999999999999999987554431 0 0123468888999999876 56
Q ss_pred EeCCCeEEEEECCCCeEEEEe-----ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCee-EE
Q 017421 245 GSSDDCIYVYDLEANKLSLRI-----LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCN-KY 312 (372)
Q Consensus 245 ~s~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~-~~ 312 (372)
|+.|++|++||..+++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+ +.+|...+. .+
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~v 332 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFV 332 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEE
Confidence 788999999999999887665 366655544444 378999999999999999974 346766555 58
Q ss_pred EeccCCCeEEEEeeeeEEEeeceEEEeec
Q 017421 313 LFNPCNKYLIIYLILVISIYSPNILLDNY 341 (372)
Q Consensus 313 ~~s~~g~~l~~~~~~~~~~~d~~i~lw~~ 341 (372)
+|+|||++|++++ .|++|+|||+
T Consensus 333 afSPDG~~LaSGS------~D~TIklWd~ 355 (356)
T 2w18_A 333 KWSGTDSHLLAGQ------KDGNIFVYHY 355 (356)
T ss_dssp EECSSSSEEEEEC------TTSCEEEEEE
T ss_pred EECCCCCEEEEEE------CCCcEEEecC
Confidence 9999999999997 7999999986
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=3.5e-26 Score=207.28 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=163.9
Q ss_pred cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEE-EEEeCCCeEEEEE
Q 017421 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVD 197 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd 197 (372)
....|...|++++|+|||++|++|+.++ ++||++.+........ +. .+..+.+.++++.+ ++++.|+.|++||
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE----MR-HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE----CS-CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee----cC-CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 4578999999999999999999998775 7899998765443311 11 37788899988877 4567788999999
Q ss_pred CCCCceeeecceeec------------------------ccc--------------------ccee--------------
Q 017421 198 VGSGTMESLANVTEI------------------------HDG--------------------LDFS-------------- 219 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~------------------------~~~--------------------~~~~-------------- 219 (372)
+.+++.......... ... +.+.
T Consensus 88 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 88 DVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECC
T ss_pred CCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECC
Confidence 988765332211000 000 0000
Q ss_pred --------------------ccCCCCccccEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCeEEEEee-c-CCCCeEEEE
Q 017421 220 --------------------AADDGGYSFGIFSLKFSTDGRELVAGSSDDC-IYVYDLEANKLSLRIL-A-HTSDVNTVC 276 (372)
Q Consensus 220 --------------------~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~-i~iwd~~~~~~~~~~~-~-~~~~v~~~~ 276 (372)
.....+|...|++++|+|+|++|++|+.|++ |++||+++++++..+. + |...|++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMK 247 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEE
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEE
Confidence 0011468899999999999999999999998 9999999999999998 5 999999999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEecccccC-----------------------------CCCCeeEEEeccCCCeEEEEeee
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLLLTR-----------------------------SINPCNKYLFNPCNKYLIIYLIL 327 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~~~~-----------------------------~~~~v~~~~~s~~g~~l~~~~~~ 327 (372)
|+ |++++|++++.|++|++||++.... ...+...++|+++|+.++++.
T Consensus 248 ~s-~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~-- 324 (355)
T 3vu4_A 248 WS-TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWP-- 324 (355)
T ss_dssp EC-TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEET--
T ss_pred EC-CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEe--
Confidence 99 9999999999999999999863210 112236789999999999886
Q ss_pred eEEEeeceEEEeecccceEEEEEee
Q 017421 328 VISIYSPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 328 ~~~~~d~~i~lw~~~~~~~~~~~~~ 352 (372)
-|+.+++|++..+.....+..
T Consensus 325 ----~dg~~~~~~~~~~~~~~~~~~ 345 (355)
T 3vu4_A 325 ----HTRMIETFKVVFDDEMERWLI 345 (355)
T ss_dssp ----TTTEEEEEEEEEETTTTEEEE
T ss_pred ----CCCeEEEEEEEcCCCCceEEE
Confidence 488899998877654444333
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=6.1e-26 Score=211.40 Aligned_cols=218 Identities=18% Similarity=0.175 Sum_probs=179.3
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+.+|...|.+++|+ ++.|++|+.||.|++||+.++..........+|...|.++.|
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-- 264 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 264 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--
Confidence 4556788899988887778888999999999997 458999999999999999987655443456688889999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
+++++++++.||.|++||+++++...... +|...|.++.|+ ++++++|+.||.|++||++++
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----------------~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLN----------------GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEE----------------CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEc----------------CCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC
Confidence 78899999999999999999987644432 466789999985 679999999999999999999
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc---------------ccCCCCCeeEEEeccCCCeEEEE
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL---------------LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~---------------~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
+++..+.+|...|.+++| ++.+|++|+.||.|++||++. +..|...|.+++| ++.+|+++
T Consensus 327 ~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~ 401 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS 401 (435)
T ss_dssp CEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEEC
T ss_pred CEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEE
Confidence 999999999999999988 578999999999999999852 3478889999999 67888887
Q ss_pred eeeeEEEeeceEEEeecccceEEEEE
Q 017421 325 LILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 325 ~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+ .|++|++||+.+.......
T Consensus 402 s------~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 402 S------HDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp C------SSSEEEEEC----------
T ss_pred e------CCCEEEEEECCCCCCcccC
Confidence 6 6999999999887655443
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=3.2e-26 Score=221.89 Aligned_cols=202 Identities=11% Similarity=0.026 Sum_probs=172.7
Q ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----eEEEEeeecccCCcc-eEEEEECC--CCCEEEEEeCCCeEE
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERG----WKIQKDILAKSLRWT-VTDTSLSP--DQRHLVYASMSPIVH 194 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~dg~i~ 194 (372)
.|.+.|.+++|+|++++|++++ ++.|.||++.++ ..... ..+|... |.+++|+| ++++|++++.||.|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~---~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQ---FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEE---ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceE---EecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence 5788999999999999999998 789999999977 44443 5688889 99999999 999999999999999
Q ss_pred EEECCCC------ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeEEEE
Q 017421 195 IVDVGSG------TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLR 264 (372)
Q Consensus 195 vwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i~iwd~~~~~~~~~ 264 (372)
+||+.++ ......... +|...|.+++|+|++++|++++.+ +.|++|| .++.+..
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~--------------~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~ 155 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQ--------------VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGE 155 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEE--------------CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEE
T ss_pred EEeCCCCcccccccccccchhh--------------cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCccee
Confidence 9999755 211111111 356699999999999999999987 6888888 5678888
Q ss_pred eecCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEeccc------ccCCCC---CeeEEEeccC-CCeEEEEeeeeEEEee
Q 017421 265 ILAHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLL------LTRSIN---PCNKYLFNPC-NKYLIIYLILVISIYS 333 (372)
Q Consensus 265 ~~~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~------~~~~~~---~v~~~~~s~~-g~~l~~~~~~~~~~~d 333 (372)
+.+|...|.+++|+ |++. ++++++.|+.|++||++. +..|.. .|.+++|+|+ +++|++++ .|
T Consensus 156 ~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------~d 228 (615)
T 1pgu_A 156 VSGHSQRINACHLK-QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG------SD 228 (615)
T ss_dssp CCSCSSCEEEEEEC-SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE------TT
T ss_pred eecCCccEEEEEEC-CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe------CC
Confidence 89999999999999 7776 899999999999999873 346777 8999999999 99999886 68
Q ss_pred ceEEEeecccceEEEEE
Q 017421 334 PNILLDNYFLLRTFYSF 350 (372)
Q Consensus 334 ~~i~lw~~~~~~~~~~~ 350 (372)
+.|++||+.+++.+..+
T Consensus 229 g~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYI 245 (615)
T ss_dssp CCEEEEETTTCCEEEEC
T ss_pred CeEEEEECCCCCEeEEe
Confidence 99999999999988887
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=3.6e-25 Score=206.72 Aligned_cols=217 Identities=18% Similarity=0.204 Sum_probs=187.1
Q ss_pred ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+.+..+.+|+.........+.+|...|.+++|+ +++|++|+.||.|++||+.+++.+.. ..+|...|.++.|+
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~- 208 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT---LYGHTSTVRCMHLH- 208 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEE-
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE---ECCCCCcEEEEEec-
Confidence 5667788899988877778889999999999998 67999999999999999999876655 55788899999995
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (372)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 259 (372)
++.+++++.||.|++||+.+++...... +|...|.+++| +++++++++.||.|++||++++
T Consensus 209 -~~~l~s~s~dg~i~~wd~~~~~~~~~~~----------------~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 209 -EKRVVSGSRDATLRVWDIETGQCLHVLM----------------GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp -TTEEEEEETTSEEEEEESSSCCEEEEEE----------------CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred -CCEEEEEeCCCEEEEEECCCCcEEEEEc----------------CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 5789999999999999999887644332 46679999998 6889999999999999999999
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
+.+..+.+|...|.+++| ++.++++++.|+.|++||+++ +..|...+.++.++ ++++++++ .|
T Consensus 270 ~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~------~d 338 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN------AD 338 (445)
T ss_dssp EEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEE------TT
T ss_pred cEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEe------CC
Confidence 999999999999999998 578999999999999999974 34677888877764 56888775 68
Q ss_pred ceEEEeecccceEEEEEee
Q 017421 334 PNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 334 ~~i~lw~~~~~~~~~~~~~ 352 (372)
+.|++||+.+++.+..+.+
T Consensus 339 g~i~vwd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp SCEEEEETTTCCEEEEECS
T ss_pred CeEEEEECCCCcEEEEEcc
Confidence 9999999999998888865
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3e-26 Score=213.53 Aligned_cols=220 Identities=9% Similarity=0.004 Sum_probs=152.7
Q ss_pred cCCCCcc-ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcc
Q 017421 93 YSGRGRF-SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWT 171 (372)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 171 (372)
+++++.+ .++.....+.+ ...+..+.+|...|++++|+|+| .++.+.+|+.+.. . .....+...
T Consensus 23 ~SpDG~~iASas~D~TV~d---~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~---~--~~~~~~~~~ 87 (588)
T 2j04_A 23 WARDGTLYLTTFPDISIGQ---PKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN---G--LLNSQPVCY 87 (588)
T ss_dssp ECTTSCEEEECSSSEEEEE---ECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS---C--SSTTSCSCC
T ss_pred ECCCCCEEEEEcCCceeec---ccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc---e--EeecCCCCc
Confidence 4555543 33333444441 22233445666666666666666 3444444443221 1 112134668
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeE
Q 017421 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251 (372)
Q Consensus 172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i 251 (372)
|.+++|+|+|+.|++++.||.|++||.++ +.... . +.. .-....+.+++|||||++|++|+.||+|
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l---~-~~~--------~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL---D-SKG--------NLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC---C-CSS--------CSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec---c-CCC--------ccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 99999999999999999999999999543 21111 1 100 0002259999999999999999999999
Q ss_pred EEEECCCCe-------EEEEe----ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc---------c-cCCCCCee
Q 017421 252 YVYDLEANK-------LSLRI----LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL---------L-TRSINPCN 310 (372)
Q Consensus 252 ~iwd~~~~~-------~~~~~----~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~---------~-~~~~~~v~ 310 (372)
++||+.++. .+.++ .+|...|.+++|+ |+| +++++.|++|++||+.. + ..|...|.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 999999875 35666 5677899999999 888 88889999999999862 3 25778899
Q ss_pred EEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+++|+ |+.|++++ +++|++||+.+++......+|
T Consensus 231 svaFs--g~~LASa~-------~~tIkLWd~~~~~~~~~~~gh 264 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-------PGYVHKIDLKNYSISSLKTGS 264 (588)
T ss_dssp CEEEE--TTEEEEEC-------SSEEEEEETTTTEEEEEECSC
T ss_pred EEEEE--CCEEEEEe-------CCeEEEEECCCCeEEEEEcCC
Confidence 99999 68888883 688999999988774333355
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=4e-25 Score=196.38 Aligned_cols=221 Identities=14% Similarity=0.168 Sum_probs=171.3
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 017421 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (372)
.++|+||+++ +||+| .|++|+|||+.+++.+.. ....+|...|++++|+|++++|++|+.||.|++||+++++....
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 5679999986 67766 489999999999876654 33567778899999999999999999999999999999876443
Q ss_pred cceeecc-------cccceecc------------------CCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-
Q 017421 207 ANVTEIH-------DGLDFSAA------------------DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK- 260 (372)
Q Consensus 207 ~~~~~~~-------~~~~~~~~------------------~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~- 260 (372)
....... ........ ...+|...+..+.|++++++|++++.|+.|++||+++++
T Consensus 105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred ecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 3211000 00000000 013678899999999999999999999999999998765
Q ss_pred ---EEEEeecCCCCeEEEEEeCCCCCEEE--EEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 261 ---LSLRILAHTSDVNTVCFGDESGHLIY--SGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 261 ---~~~~~~~~~~~v~~~~~sp~~~~~l~--s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
.......+...|.+++++|.++..+. +++.++.|++||.+... .+...+..+.|+|++..++++++.
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~--- 261 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF--- 261 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT---
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc---
Confidence 33455678889999999955555553 55678999999987433 567789999999999998876422
Q ss_pred EeeceEEEeecccceEEEEEeeeE
Q 017421 331 IYSPNILLDNYFLLRTFYSFMVHI 354 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~~~~~~~~h~ 354 (372)
.|+.|++||+.+++.+..+.+|.
T Consensus 262 -~d~~i~iwd~~~~~~~~~l~gH~ 284 (318)
T 4ggc_A 262 -AQNQLVIWKYPTMAKVAELKGHT 284 (318)
T ss_dssp -TTCCEEEEETTTCCEEEEECCCS
T ss_pred -CCCEEEEEECCCCcEEEEEcCCC
Confidence 48999999999999999999984
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=3.9e-25 Score=206.46 Aligned_cols=204 Identities=15% Similarity=0.180 Sum_probs=174.7
Q ss_pred CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421 116 GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (372)
Q Consensus 116 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 195 (372)
....+.+|.+.|.. ++++++++|++|+.||.|++||+.+++.+.. ..+|...|.++.|+ ++.+++++.||.|++
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT---LVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEE---CCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEE---EcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 45567889887543 3555699999999999999999998876655 56888899999997 679999999999999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 275 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 275 (372)
||+.+++...... +|...|.++.|+ ++.+++|+.||.|++||+.+++.+..+.+|...|.++
T Consensus 184 wd~~~~~~~~~~~----------------~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 184 WNAETGECIHTLY----------------GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp EETTTTEEEEEEC----------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE
T ss_pred EECCcCcEEEEEC----------------CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEE
Confidence 9999887644332 577799999996 5689999999999999999999999999999999999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
+| +++++++++.||.|++||+++ +..|...|.++.| ++.++++++ .|+.|++||+.+++.+..
T Consensus 246 ~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 246 QY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS------LDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp EE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE------TTSCEEEEETTTCCEEEE
T ss_pred EE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe------CCCeEEEEECCCCCEEEE
Confidence 98 578899999999999999873 4478899999999 788888876 689999999999999988
Q ss_pred EeeeE
Q 017421 350 FMVHI 354 (372)
Q Consensus 350 ~~~h~ 354 (372)
+.+|.
T Consensus 315 ~~~~~ 319 (445)
T 2ovr_B 315 LTGHQ 319 (445)
T ss_dssp ECCCC
T ss_pred EcCCc
Confidence 87763
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.3e-26 Score=210.41 Aligned_cols=210 Identities=11% Similarity=-0.001 Sum_probs=149.6
Q ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEE--eeecccCCcceEEEEECC--------CCCEEEEEeCCC
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQK--DILAKSLRWTVTDTSLSP--------DQRHLVYASMSP 191 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg 191 (372)
.|...+....+++++++|++++.|++|+|||+..+..... .....+|...|.+++|+| |+++|++++.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 3445555556666788999999999999999998865433 234678999999999998 889999999999
Q ss_pred eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEE------
Q 017421 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLR------ 264 (372)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~------ 264 (372)
+|++||+.++....... +|..++.+++|+|++ ++|++++.|++|++||+++++....
T Consensus 167 tv~~Wd~~~~~~~~~~~----------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGY----------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp EEEEEEEETTEEEEEEE----------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------
T ss_pred eEEEEECCCCceeeeec----------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC
Confidence 99999998776533222 356689999999987 4799999999999999988754322
Q ss_pred -------------------eecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------cCCCCCeeE--------
Q 017421 265 -------------------ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------TRSINPCNK-------- 311 (372)
Q Consensus 265 -------------------~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~~~~~~v~~-------- 311 (372)
..+|...+.++.|++++++.|++++.|+.+++||+... ..+...+..
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 13577789999998889999999999999999998632 122222222
Q ss_pred ----------EEecc-CCC-eEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 312 ----------YLFNP-CNK-YLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 312 ----------~~~s~-~g~-~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
..|+| .+. ++++++ .|++|++||+.+++.+..+.+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs------~Dg~V~lwd~~~~~~~~~~~~~ 358 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHS------QHGLIQLINTYEKDSNSIPIQL 358 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEET------TTTEEEEEETTCTTCCEEEEEC
T ss_pred cccccCcceeEEEccCCCCEEEEEEC------CCCEEEEEECCCCcEEEEecCC
Confidence 23333 233 444444 5899999999999888777766
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.1e-25 Score=222.21 Aligned_cols=221 Identities=11% Similarity=-0.003 Sum_probs=171.7
Q ss_pred CCCCceEEEEECC----------CCCEEEEEeCCCcEEEEeCCCCeEEEEe-----------------------------
Q 017421 122 QTTSRAYVSQFSA----------DGSLFVAGFQASQIRIYDVERGWKIQKD----------------------------- 162 (372)
Q Consensus 122 ~~~~~v~~~~~s~----------~~~~l~~~~~dg~i~vwd~~~~~~~~~~----------------------------- 162 (372)
.+...|..+.+.+ +...+++++.||.|++|++.++......
T Consensus 340 ~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~ 419 (902)
T 2oaj_A 340 PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLG 419 (902)
T ss_dssp SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHH
T ss_pred CCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHH
Confidence 4577888888866 3447888999999999999766432210
Q ss_pred ---------eecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEE
Q 017421 163 ---------ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL 233 (372)
Q Consensus 163 ---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 233 (372)
..+.+|...+.+++|+|++++|++|+.|++|++||+.++.......+... +......+|...|.++
T Consensus 420 ~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~-----l~~~~~~~h~~~V~sv 494 (902)
T 2oaj_A 420 ALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVN-----LSRTLNKAKELAVDKI 494 (902)
T ss_dssp HHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEE-----HHHHTTCSSSCCEEEE
T ss_pred HHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEee-----chhhcCCCCCCceeEE
Confidence 01223444455667789999999999999999999998753210000000 0000012577899999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCC---------------------------------------------eEEEEeecC
Q 017421 234 KFSTDGRELVAGSSDDCIYVYDLEAN---------------------------------------------KLSLRILAH 268 (372)
Q Consensus 234 ~~sp~~~~l~s~s~dg~i~iwd~~~~---------------------------------------------~~~~~~~~~ 268 (372)
+|+||+++||+|+.||+|++||+.++ +++..+.+|
T Consensus 495 afspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h 574 (902)
T 2oaj_A 495 SFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN 574 (902)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC
T ss_pred EecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcC
Confidence 99999999999999999999999765 246778889
Q ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-----------c-cCCCCCeeEEEec-----cCC---CeEEEEeeee
Q 017421 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-----------L-TRSINPCNKYLFN-----PCN---KYLIIYLILV 328 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----------~-~~~~~~v~~~~~s-----~~g---~~l~~~~~~~ 328 (372)
.+.|++++|+ |+| +||+|+.|++|++||++. + .+|...|++++|+ ||| ++|++++
T Consensus 575 ~~~V~svafS-pdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs--- 649 (902)
T 2oaj_A 575 KGKTSAINNS-NIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGT--- 649 (902)
T ss_dssp SCSEEEEEEC-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEE---
T ss_pred CCcEEEEEec-CCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEe---
Confidence 9999999999 999 999999999999999863 1 2788889999999 886 7888886
Q ss_pred EEEeeceEEEeec---ccceEEEEEeeeEE
Q 017421 329 ISIYSPNILLDNY---FLLRTFYSFMVHIL 355 (372)
Q Consensus 329 ~~~~d~~i~lw~~---~~~~~~~~~~~h~~ 355 (372)
.|++|++||+ .+|+....|.+|..
T Consensus 650 ---~D~tv~~wd~~p~~~g~~~~~~~~~~~ 676 (902)
T 2oaj_A 650 ---DMGEVITYKILPASGGKFDVQLMDITN 676 (902)
T ss_dssp ---TTSEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred ---cCCcEEEEEEecCCCCcEEEEecCcee
Confidence 6999999999 89999999999974
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.6e-25 Score=199.60 Aligned_cols=195 Identities=13% Similarity=0.040 Sum_probs=149.9
Q ss_pred CCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 017421 122 QTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (372)
Q Consensus 122 ~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 199 (372)
+|...|.+++|+| ++++|++++.||.|++||+.++..... ....+...+.+++|+|++.+|++|+.||.|++||++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~--~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIV--HSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEE--ECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEE--EecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 5678999999999 999999999999999999998866433 223455579999999999999999999999999999
Q ss_pred CCcee-eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec---CCCCeE--
Q 017421 200 SGTME-SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA---HTSDVN-- 273 (372)
Q Consensus 200 ~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~v~-- 273 (372)
+++.. .... .+|..+|++++|+|++.+|++++ ++.|++||+++++.+..+.. |...+.
T Consensus 201 ~~~~~~~~~~---------------~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 201 SPDQASSRFP---------------VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp CTTSCCEECC---------------CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred CCCCCccEEe---------------ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccce
Confidence 88754 2221 02777999999999999999999 45999999998876544433 334443
Q ss_pred EEEEeCCCCCEEEEEeC-CCeEEEEecccccC--CCCCeeEEEecc---CCCeEEEEeeeeEEEeeceEEEeec
Q 017421 274 TVCFGDESGHLIYSGSD-DNLCKVNSVLLLTR--SINPCNKYLFNP---CNKYLIIYLILVISIYSPNILLDNY 341 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~-dg~i~vwd~~~~~~--~~~~v~~~~~s~---~g~~l~~~~~~~~~~~d~~i~lw~~ 341 (372)
+++|+ |++++|++++. |+.|++|++..... ...++..++|.| +++.++++. .|+.+.++-.
T Consensus 265 ~~~~~-~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~d~~~~~~~~ 331 (343)
T 3lrv_A 265 TYDID-DSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVC------GDGGIAAILK 331 (343)
T ss_dssp EEEEC-TTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEE------ETTEEEEEEE
T ss_pred EEEEC-CCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEe------cCCceEEEEe
Confidence 69999 99999999998 99999999864321 114566888998 888887764 4677776643
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=2.7e-24 Score=199.35 Aligned_cols=204 Identities=15% Similarity=0.128 Sum_probs=168.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (372)
.++.|+||++ +.|++|. |++|+|||+.+++.... ....+|...|++++|+|++++|++|+.||.|++||+.+++...
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~-~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEE-EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 4677999975 5777765 89999999999865543 3356777789999999999999999999999999999987654
Q ss_pred ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeecCCCCeEEEEEeCCCCCE
Q 017421 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNTVCFGDESGHL 284 (372)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~ 284 (372)
... +|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+ +++++
T Consensus 184 ~~~----------------~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~-~~g~~ 244 (420)
T 4gga_A 184 NMT----------------SHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRH 244 (420)
T ss_dssp EEC----------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSE
T ss_pred EEe----------------CCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeec-CCCCe
Confidence 433 577789888775 679999999999999999864 4667788999999999999 99999
Q ss_pred EEEEeCCCeEEEEeccc----------ccCCCCCeeEEEeccCCCeEE-EEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 285 IYSGSDDNLCKVNSVLL----------LTRSINPCNKYLFNPCNKYLI-IYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 285 l~s~~~dg~i~vwd~~~----------~~~~~~~v~~~~~s~~g~~l~-~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
+++++.|+.+++|+... ...|...|..++|+|++..++ ++++ ..|++|++||+.+++.+..+..|
T Consensus 245 l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g----s~D~~I~iwd~~t~~~~~~~~~~ 320 (420)
T 4gga_A 245 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG----TSDRHIRIWNVCSGACLSAVDAH 320 (420)
T ss_dssp EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC----TTTCEEEEEETTTTEEEEEEECS
T ss_pred eeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee----cCCCEEEEEeCCccccceeeccc
Confidence 99999999999999863 236788999999999876554 4321 15899999999999998888766
Q ss_pred EE
Q 017421 354 IL 355 (372)
Q Consensus 354 ~~ 355 (372)
..
T Consensus 321 ~~ 322 (420)
T 4gga_A 321 SQ 322 (420)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=3.6e-25 Score=194.27 Aligned_cols=183 Identities=11% Similarity=0.026 Sum_probs=138.3
Q ss_pred CceeEeeeeeCC-CCCccccCCCCceEEEEECC---CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 103 DCCHMLSRYLPV-NGPWPVDQTTSRAYVSQFSA---DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 103 ~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
++.+++|.+.+. +....+..|+..++.++|+| ++.+|++++.|++|+|||+.+++.+..+.....+...+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 677778887663 33445667888888888888 67899999999999999999998777643222223467788999
Q ss_pred CCCCEE------------EEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe
Q 017421 179 PDQRHL------------VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (372)
Q Consensus 179 ~~~~~l------------~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s 246 (372)
|+++++ ++|+.|++|++||..+++......... ..+|...+.+..++ +.++++++
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-----------p~Gh~~~~lsg~~s--g~~lASgS 302 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-----------PPGQAGRFLEGDVK--DHCAAAIL 302 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-----------CTTCCCCEEEEEEE--TTEEEEEE
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-----------cCCCcceeEccccC--CCEEEEEc
Confidence 999876 567789999999999987654322110 01454455444444 78999999
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCeE-EEEEeCCCCCEEEEEeCCCeEEEEec
Q 017421 247 SDDCIYVYDLEANKLSLRILAHTSDVN-TVCFGDESGHLIYSGSDDNLCKVNSV 299 (372)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~sp~~~~~l~s~~~dg~i~vwd~ 299 (372)
.|++|+|||+.+++++.++.+|...+. +++|+ |+|++|++|+.|++|+|||+
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS-PDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS-GTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEEC-SSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC-CCCCEEEEEECCCcEEEecC
Confidence 999999999999999999999987655 58999 99999999999999999996
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.3e-23 Score=192.58 Aligned_cols=226 Identities=14% Similarity=0.108 Sum_probs=176.4
Q ss_pred cCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 101 AADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
+.+..+.+|+.........+..| ..+.+++|+|++++| ++++.|+.|++||+.+++.+.... .+. .+.+++|+|
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---~~~-~v~~~~~sp 83 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---AGS-SPQGVAVSP 83 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---CSS-SEEEEEECT
T ss_pred CCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---CCC-CccceEECC
Confidence 34566777777655545555555 458999999999987 667789999999999887655422 222 799999999
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECC
Q 017421 180 DQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLE 257 (372)
Q Consensus 180 ~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~ 257 (372)
++++|++++ .++.|++||+.+++...... +...+.+++|+|+++.| ++++.++.|++||+.
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----------------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEe-----------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 999886554 57999999999887644332 12368999999999977 678889999999999
Q ss_pred CCeEEEEeecCCCCeEEEEEeCCCCCEE-EEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 258 ANKLSLRILAHTSDVNTVCFGDESGHLI-YSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 258 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l-~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
+++.+..+..+ ..+.+++|+ |+++.| ++++.++.|++||+++.. .+...+.+++|+|+|++|+++....
T Consensus 147 ~~~~~~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~--- 221 (391)
T 1l0q_A 147 TKAVINTVSVG-RSPKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK--- 221 (391)
T ss_dssp TTEEEEEEECC-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS---
T ss_pred CCcEEEEEecC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCc---
Confidence 99988888755 567999999 888877 567788999999997432 3556789999999999998874110
Q ss_pred eeceEEEeecccceEEEEEeee
Q 017421 332 YSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 332 ~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.++.|++||..+++.+..+..|
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECC
T ss_pred CCCcEEEEECCCCeEEEEEecC
Confidence 3788999999999888777655
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=3.6e-23 Score=191.41 Aligned_cols=229 Identities=17% Similarity=0.114 Sum_probs=173.9
Q ss_pred ceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCeEEEEeeecccCCcceEEEEECCC
Q 017421 104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (372)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (372)
..+.+|+.. ......+.+|...|.+++|+|||++|++++.++ .|++||+.+++... ...+...+.+++|+||
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~----l~~~~~~~~~~~~spd 233 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----VASFPRHNGAPAFSPD 233 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----EECCSSCEEEEEECTT
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE----eecCCCcccCEEEcCC
Confidence 456677664 455677888999999999999999999999875 99999999885532 3345567999999999
Q ss_pred CCEEE-EEeCCC--eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CC--eEEEE
Q 017421 181 QRHLV-YASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DD--CIYVY 254 (372)
Q Consensus 181 ~~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg--~i~iw 254 (372)
|+.|+ +++.++ .|++||+.+++...+. .|...+.+++|+|||++|++++. ++ .|++|
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~~l~-----------------~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIRQVT-----------------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEECC-----------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEEeCc-----------------CCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 99888 555555 4999999987753322 24458999999999999988876 44 68888
Q ss_pred ECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC---CeEEEEecccc-----cCCCCCeeEEEeccCCCeEEEEee
Q 017421 255 DLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD---NLCKVNSVLLL-----TRSINPCNKYLFNPCNKYLIIYLI 326 (372)
Q Consensus 255 d~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d---g~i~vwd~~~~-----~~~~~~v~~~~~s~~g~~l~~~~~ 326 (372)
|+.+++. ..+..+...+.+++|+ |+|++|++++.+ ..|.+||+.+. ..+ ..+.+++|+|+|++|+.++
T Consensus 297 d~~~~~~-~~l~~~~~~~~~~~~s-pdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s- 372 (415)
T 2hqs_A 297 NINGGAP-QRITWEGSQNQDADVS-SDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-FLDETPSLAPNGTMVIYSS- 372 (415)
T ss_dssp ETTSSCC-EECCCSSSEEEEEEEC-TTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS-SSCEEEEECTTSSEEEEEE-
T ss_pred ECCCCCE-EEEecCCCcccCeEEC-CCCCEEEEEECcCCceEEEEEECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEE-
Confidence 9988764 4555677789999999 999999888764 58999998742 233 3789999999999988775
Q ss_pred eeEEEeec---eEEEeecccceEEEEEeee------EEEeeecccCC
Q 017421 327 LVISIYSP---NILLDNYFLLRTFYSFMVH------ILFSGYLHNDH 364 (372)
Q Consensus 327 ~~~~~~d~---~i~lw~~~~~~~~~~~~~h------~~~~~~~~~~~ 364 (372)
.++ .|.+||+. ++....+.+| ..++-++|..+
T Consensus 373 -----~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~~~ 413 (415)
T 2hqs_A 373 -----SQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHHHH 413 (415)
T ss_dssp -----EETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCCCC
T ss_pred -----cCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccccc
Confidence 233 78899986 4455556555 44455555443
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=5.5e-23 Score=188.29 Aligned_cols=223 Identities=13% Similarity=0.050 Sum_probs=173.9
Q ss_pred CCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEE-EeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC
Q 017421 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVA-GFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (372)
.+..+.+|+....+....+..+. .+.+++|+|++++|++ ++.++.|++||+.+++.+.... . ...+.+++|+|+
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~-~~~~~~~~~s~d 126 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---T-GKSPLGLALSPD 126 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---C-SSSEEEEEECTT
T ss_pred CCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---C-CCCcceEEECCC
Confidence 45677777765555444444444 9999999999998865 4567999999999986655422 2 235899999999
Q ss_pred CCEE-EEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCC
Q 017421 181 QRHL-VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEA 258 (372)
Q Consensus 181 ~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~ 258 (372)
++.+ ++++.++.|++||+.+++....... ...+.+++|+|+++++ ++++.++.|++||+++
T Consensus 127 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSV-----------------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEec-----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 9987 6777799999999998876443321 1257899999999887 5777889999999999
Q ss_pred CeEEEEeecCCCCeEEEEEeCCCCCEEEEEe---CCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 259 NKLSLRILAHTSDVNTVCFGDESGHLIYSGS---DDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 259 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~---~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
++....+. +...+.+++|+ |++++|++++ .++.|++||+++.+ .....+.+++|+|+|++|+++.
T Consensus 190 ~~~~~~~~-~~~~~~~~~~~-~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~----- 262 (391)
T 1l0q_A 190 NSVIDTVK-VEAAPSGIAVN-PEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVAL----- 262 (391)
T ss_dssp TEEEEEEE-CSSEEEEEEEC-TTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEE-----
T ss_pred CeEEEEEe-cCCCccceEEC-CCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEc-----
Confidence 98877776 55688999999 9999888887 68999999987432 2234578999999999885442
Q ss_pred EeeceEEEeecccceEEEEEeee
Q 017421 331 IYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
..|+.+++||+.+++.+..+.+|
T Consensus 263 ~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 263 SFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEEECCCCcEEEEEECC
Confidence 15899999999999998888766
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=3e-23 Score=192.66 Aligned_cols=229 Identities=12% Similarity=0.033 Sum_probs=178.8
Q ss_pred CceeEeeeeeCCCCCc-----cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421 103 DCCHMLSRYLPVNGPW-----PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (372)
+..+.+|+........ .+.+|...|.+++|+|+++++++++.|+.|++||+.++..+.. ...|...+.+++|
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~---~~~~~~~~~~~~~ 219 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT---VDLTGKWSKILLY 219 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE---EECSSSSEEEEEE
T ss_pred CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE---EcCCCCCeeEEEE
Confidence 3457777765444333 4568899999999999999999999999999999998866654 3356668999999
Q ss_pred CCCCCEEEEEe-CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--------CC
Q 017421 178 SPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--------SD 248 (372)
Q Consensus 178 ~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--------~d 248 (372)
+|+++.+++++ .++.|++||+++++...... +...+.+++|+|+++++++++ .|
T Consensus 220 ~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 220 DPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-----------------KIGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEEEEECC-----------------CCSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred cCCCCEEEEEecCCCcEEEEECCCCcEEEEec-----------------CCCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 99999886554 79999999999887643332 123589999999999998887 48
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEE
Q 017421 249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLI 322 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~ 322 (372)
+.|++||+.+++.+..+ .|...+.+++|+ |+++ ++++++.|+.|++||+.+.+ .+...+.+++|+|+|++++
T Consensus 283 g~i~~~d~~~~~~~~~~-~~~~~~~~~~~~-~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTI-GPPGNKRHIVSG-NTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEEEETTTTEEEEEE-EEEECEEEEEEC-SSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCcEEeec-cCCCCcceEEEC-CCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEE
Confidence 89999999999877665 356688999999 8886 45666899999999997432 4567789999999999888
Q ss_pred EEeeeeE---------EEeeceEEEeecccceEEEEEeee
Q 017421 323 IYLILVI---------SIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 323 ~~~~~~~---------~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
++....- .-.|+.|++||..+++.+..+.++
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 8752110 001568999999999988877654
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=5.2e-22 Score=184.28 Aligned_cols=214 Identities=16% Similarity=0.097 Sum_probs=170.3
Q ss_pred cCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEE-EeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421 101 AADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVA-GFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (372)
+.+..+.+|+.........+..|...+.+++|+|+++.+++ ++.++.|++||+.++..+.. ... ...+.+++|+|
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~---~~~-~~~~~~~~~~~ 263 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK---TDK-IGLPRGLLLSK 263 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE---CCC-CSEEEEEEECT
T ss_pred CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE---ecC-CCCceEEEEcC
Confidence 34466777877666666667789999999999999998854 55799999999998866544 222 33589999999
Q ss_pred CCCEEEEEe--------CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCe
Q 017421 180 DQRHLVYAS--------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDC 250 (372)
Q Consensus 180 ~~~~l~~~~--------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~ 250 (372)
+++.+++++ .|+.|++||+.+++...... |...+.+++|+|+++.+ ++++.++.
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-----------------PPGNKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-----------------EEECEEEEEECSSTTEEEEEETTTTE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-----------------CCCCcceEEECCCCCEEEEEecCCCE
Confidence 999999888 48899999999887544332 33478899999999755 66688999
Q ss_pred EEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC---------------CCeEEEEeccccc-----CCCCCee
Q 017421 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD---------------DNLCKVNSVLLLT-----RSINPCN 310 (372)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~---------------dg~i~vwd~~~~~-----~~~~~v~ 310 (372)
|++||+.+++.+..+. +...+.+++|+ |++++|++++. ||.|++||+.+.+ .....+.
T Consensus 327 v~v~d~~~~~~~~~~~-~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~ 404 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIP-VFDKPNTIALS-PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPT 404 (433)
T ss_dssp EEEEETTTTEEEEEEE-CSSSEEEEEEC-TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEE
T ss_pred EEEEECCCCcEEEEec-CCCCCCeEEEc-CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCc
Confidence 9999999998887776 67889999999 99998888876 5799999987432 2356789
Q ss_pred EEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
+++|+|+|++|+++.. .|+.|++|++.
T Consensus 405 ~~~~s~dg~~l~~~~~-----~d~~i~v~~~~ 431 (433)
T 3bws_A 405 GLDVSPDNRYLVISDF-----LDHQIRVYRRD 431 (433)
T ss_dssp EEEECTTSCEEEEEET-----TTTEEEEEEET
T ss_pred eEEEcCCCCEEEEEEC-----CCCeEEEEEec
Confidence 9999999999987641 37889999875
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.9e-22 Score=184.64 Aligned_cols=208 Identities=15% Similarity=0.157 Sum_probs=152.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------eEEEE--eeecccCCcceEEEEECCCCCEEE----EE
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERG----------WKIQK--DILAKSLRWTVTDTSLSPDQRHLV----YA 187 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~----------~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~----~~ 187 (372)
...++.+++++++.++++++.++ ++||+.... ..+.. ......+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34688899999999999999887 888875311 00100 001123455799999999999999 77
Q ss_pred eCCCeEEEEECCCCc-----eeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeE
Q 017421 188 SMSPIVHIVDVGSGT-----MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKL 261 (372)
Q Consensus 188 ~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~~~~~ 261 (372)
+.|+.|++||+.++. ........ ....+|...|.+++|+|+ +++|++++.||+|++||++++..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYH----------KLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEE----------ECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred CCCceEEEEEccccccCCcCCcceeeee----------eccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 889999999987541 10000000 011257889999999998 78999999999999999999987
Q ss_pred EEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-c----cc-------CCCCCeeEEEeccCCCeEEEEeee--
Q 017421 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-L----LT-------RSINPCNKYLFNPCNKYLIIYLIL-- 327 (372)
Q Consensus 262 ~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-~----~~-------~~~~~v~~~~~s~~g~~l~~~~~~-- 327 (372)
.....+|...|++++|+ |+|++|++|+.||.|++||++ . +. .|...|.++.|++++.++++....
T Consensus 185 ~~~~~~~~~~v~~v~ws-pdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWS-PKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADG 263 (434)
T ss_dssp EEEEECGGGCEEEEEEC-TTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTC
T ss_pred eeeccCCCCceeEEEEc-CCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCC
Confidence 77777888999999999 899999999999999999987 1 11 123378999999998888765321
Q ss_pred eEEEeeceEEEeecccc
Q 017421 328 VISIYSPNILLDNYFLL 344 (372)
Q Consensus 328 ~~~~~d~~i~lw~~~~~ 344 (372)
.+.. ...+++|++...
T Consensus 264 ~~~~-~~~v~i~~l~~~ 279 (434)
T 2oit_A 264 TLET-SPDVVMALLPKK 279 (434)
T ss_dssp CSSS-CCEEEEEECCCT
T ss_pred ccCC-CCceEEEEeccC
Confidence 1110 134788887654
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=2.7e-21 Score=178.77 Aligned_cols=216 Identities=14% Similarity=0.076 Sum_probs=161.5
Q ss_pred eeEeeee--eCCCCC--ccccCCCCceEEEEECC--------------CCCEEEEEeCC------CcEEEEeCCCCeEEE
Q 017421 105 CHMLSRY--LPVNGP--WPVDQTTSRAYVSQFSA--------------DGSLFVAGFQA------SQIRIYDVERGWKIQ 160 (372)
Q Consensus 105 ~~~~~~~--~~~~~~--~~~~~~~~~v~~~~~s~--------------~~~~l~~~~~d------g~i~vwd~~~~~~~~ 160 (372)
.+++|+. ...+.. ..+.+|...+..+++++ .+..++.++.+ +.|++||+... ...
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCE
Confidence 5778887 555433 33677877787777764 25667666554 79999999754 222
Q ss_pred EeeecccCCcceEEEEECCCCCEEEEEeCCC---eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC
Q 017421 161 KDILAKSLRWTVTDTSLSPDQRHLVYASMSP---IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST 237 (372)
Q Consensus 161 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 237 (372)
. ...|...+.+++|+||+++|++++.++ .|++||+.+++...+. +|...+.+++|+|
T Consensus 173 ~---l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-----------------~~~~~~~~~~~sp 232 (415)
T 2hqs_A 173 V---VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-----------------SFPRHNGAPAFSP 232 (415)
T ss_dssp E---EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-----------------CCSSCEEEEEECT
T ss_pred E---EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-----------------cCCCcccCEEEcC
Confidence 2 345667899999999999999999875 9999999988764322 2445799999999
Q ss_pred CCCEEE-EEeCCC--eEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC-CC--eEEEEecccc-----cCCC
Q 017421 238 DGRELV-AGSSDD--CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-DN--LCKVNSVLLL-----TRSI 306 (372)
Q Consensus 238 ~~~~l~-s~s~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-dg--~i~vwd~~~~-----~~~~ 306 (372)
||+.|+ +++.++ .|++||+.+++. ..+..|...+.+++|+ |+|+.|++++. ++ .|.+||+... ..+.
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~ 310 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG 310 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEEC-CCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC
Confidence 999887 666555 499999998876 5677788899999999 99999888876 45 6777787632 2455
Q ss_pred CCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 307 NPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 307 ~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
..+.+++|+|+|++|+.+.... -+..|.+||+.+++.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGV 347 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCE
T ss_pred CcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCE
Confidence 6788999999999998774210 035788888887765
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=2.7e-20 Score=162.80 Aligned_cols=221 Identities=13% Similarity=0.079 Sum_probs=158.0
Q ss_pred CCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-CeEEEEeeecccC-CcceEEEEECC
Q 017421 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQKDILAKSL-RWTVTDTSLSP 179 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~-~~~v~~~~~~~ 179 (372)
.+..+.+|+.... ....+..|...|.+++|+|++++|++++ ++.|++||+.+ +..... ...+ ...+.+++|+|
T Consensus 20 ~~~~i~~~d~~~~-~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 20 MRSSIEIFNIRTR-KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV---DTGFATICNNDHGISP 94 (297)
T ss_dssp CCEEEEEEETTTT-EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC---CCTTCCCBCSCCEECT
T ss_pred cceeEEEEeCCCC-ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe---ccccccccccceEECC
Confidence 3445556654333 3345667889999999999999999987 68999999988 644332 2233 35688999999
Q ss_pred CCCEEEEEeC--CC--eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEE
Q 017421 180 DQRHLVYASM--SP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVY 254 (372)
Q Consensus 180 ~~~~l~~~~~--dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iw 254 (372)
++++|++++. ++ .|.+|++.++...... +...+..++|+|++++|+ ++..++.+.+|
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMT------------------KNLPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECC------------------SSSSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEee------------------cCCCccceEECCCCCEEEEEECCCCceEEE
Confidence 9999999983 33 4555555554432111 112488899999999887 77789999999
Q ss_pred ECCC-CeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEecc-------cccCCCCCeeEEEeccCCCeEEEEe
Q 017421 255 DLEA-NKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVL-------LLTRSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 255 d~~~-~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~-------~~~~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
+++. +.....+..+...+.+++|+ |+++.|++++ .++.+++|++. .+..+...+..++|+|+|++|++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 157 SMDIDSGVETRLTHGEGRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp EEETTTCCEEECCCSSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcceEcccCCCccccceEC-CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEE
Confidence 8632 23345666788899999999 8999887766 58999999875 2335566788999999999998775
Q ss_pred eeeEEE-----eeceEEEeecccceE
Q 017421 326 ILVISI-----YSPNILLDNYFLLRT 346 (372)
Q Consensus 326 ~~~~~~-----~d~~i~lw~~~~~~~ 346 (372)
...-.. .+..|.+||+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCCCCcccccCceEEEEEecCCCCc
Confidence 210000 136789999988765
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2e-20 Score=173.76 Aligned_cols=163 Identities=13% Similarity=0.056 Sum_probs=128.1
Q ss_pred CCCCceEEEEECCCCCEEE----EEeCCCcEEEEeCCCC--------eEEEEeeecccCCcceEEEEECCC-CCEEEEEe
Q 017421 122 QTTSRAYVSQFSADGSLFV----AGFQASQIRIYDVERG--------WKIQKDILAKSLRWTVTDTSLSPD-QRHLVYAS 188 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~----~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 188 (372)
.+...|.+++|+|++++|+ +|+.|+.|+|||+.+. +.+.......+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 7888999999998654 222233445678889999999997 88999999
Q ss_pred CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC
Q 017421 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (372)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 268 (372)
.||.|++||++++....... +|...|++++|+|+|++|++|+.||.|++||++ ++....+..|
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~----------------~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~ 232 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATL----------------PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCP 232 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEE----------------CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCC
T ss_pred CCCeEEEEEcCCCcceeecc----------------CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCC
Confidence 99999999999874321111 366799999999999999999999999999998 5555555443
Q ss_pred C-------CCeEEEEEeCCCCCEEEE-EeCCC------eEEEEecccc
Q 017421 269 T-------SDVNTVCFGDESGHLIYS-GSDDN------LCKVNSVLLL 302 (372)
Q Consensus 269 ~-------~~v~~~~~sp~~~~~l~s-~~~dg------~i~vwd~~~~ 302 (372)
. ..|.+++|+ +++.++++ .+.|| .+++|+++..
T Consensus 233 ~~~~~~~~~~v~~v~w~-~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWI-GTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTCCTTSCEEEEEEEEE-ETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccCCCCceeEEEEEEe-cCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 2 378999999 77777654 33443 3899998743
No 131
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=6.2e-20 Score=166.15 Aligned_cols=186 Identities=13% Similarity=0.086 Sum_probs=133.9
Q ss_pred ccccCCceeEeeeeeCC-CCCccccCCCCceEEEEECCCCCEEEE--EeCCCcEEEEeCCCCeEE------------EE-
Q 017421 98 RFSAADCCHMLSRYLPV-NGPWPVDQTTSRAYVSQFSADGSLFVA--GFQASQIRIYDVERGWKI------------QK- 161 (372)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~dg~i~vwd~~~~~~~------------~~- 161 (372)
.+...+..+.+|+.... .....+.. +...+++++ .++++ |+.||.|++||+.++... ..
T Consensus 113 ~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~ 187 (355)
T 3vu4_A 113 IVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGK 187 (355)
T ss_dssp EEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------C
T ss_pred EEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcc
Confidence 33444566667766554 33333333 445556666 56665 578999999999875410 00
Q ss_pred eeecccCCcceEEEEECCCCCEEEEEeCCCe-EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC
Q 017421 162 DILAKSLRWTVTDTSLSPDQRHLVYASMSPI-VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (372)
Q Consensus 162 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 240 (372)
.....+|..+|.+++|+|++++|++++.|+. |++||+++++...... .. .|...|.+++|+|+++
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~--~g------------~h~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR--RG------------LDRADVVDMKWSTDGS 253 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE--CT------------TCCSCEEEEEECTTSC
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--cC------------CCCCcEEEEEECCCCC
Confidence 2346789999999999999999999999998 9999999987644332 00 1667999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeE--EEEe--------------------e-cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEE
Q 017421 241 ELVAGSSDDCIYVYDLEANKL--SLRI--------------------L-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVN 297 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~~~--~~~~--------------------~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vw 297 (372)
+|++++.|++|++||++.+.. ...+ . .+......++|+ ++++.|++++.||.+++|
T Consensus 254 ~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~d~~~l~~~~~dg~~~~~ 332 (355)
T 3vu4_A 254 KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI-SESSLVVVWPHTRMIETF 332 (355)
T ss_dssp EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES-SSSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe-CCCCEEEEEeCCCeEEEE
Confidence 999999999999999976531 1111 1 112234678999 999999999999999999
Q ss_pred eccccc
Q 017421 298 SVLLLT 303 (372)
Q Consensus 298 d~~~~~ 303 (372)
++....
T Consensus 333 ~~~~~~ 338 (355)
T 3vu4_A 333 KVVFDD 338 (355)
T ss_dssp EEEEET
T ss_pred EEEcCC
Confidence 987543
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=2.2e-19 Score=178.10 Aligned_cols=207 Identities=13% Similarity=-0.024 Sum_probs=157.2
Q ss_pred CCceEEEEECCCCCEEEEEeC-CC-----cEEEEeCCCCeEEEEeeecccCC----------------------cceEEE
Q 017421 124 TSRAYVSQFSADGSLFVAGFQ-AS-----QIRIYDVERGWKIQKDILAKSLR----------------------WTVTDT 175 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~-dg-----~i~vwd~~~~~~~~~~~~~~~~~----------------------~~v~~~ 175 (372)
...+.+++|+|||++|++++. |+ .|++||+.+++..... ....+. ..+.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE-CGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEcc-chhhcccccccccchhhhhhhhhhhccccCccee
Confidence 457999999999999999988 88 8999999988654332 122222 347899
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCCC---ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEE
Q 017421 176 SLSPDQRHLVYASMSPIVHIVDVGSG---TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIY 252 (372)
Q Consensus 176 ~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~ 252 (372)
+|+|||++|++++. +.|++||+.++ ....+. .|...+..++|+|||++|++++ ++.|+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~-----------------~~~~~~~~~~~SPDG~~la~~~-~~~i~ 175 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT-----------------HGEGFATDAKLSPKGGFVSFIR-GRNLW 175 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC-----------------CSSSCEEEEEECTTSSEEEEEE-TTEEE
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc-----------------cCCcccccccCCCCCCEEEEEe-CCcEE
Confidence 99999999999886 99999999987 432222 2445799999999999999887 46999
Q ss_pred EEECCCCeEEEEeecCCCC----------------eEEEEEeCCCCCEEEEEeCCC------------------------
Q 017421 253 VYDLEANKLSLRILAHTSD----------------VNTVCFGDESGHLIYSGSDDN------------------------ 292 (372)
Q Consensus 253 iwd~~~~~~~~~~~~~~~~----------------v~~~~~sp~~~~~l~s~~~dg------------------------ 292 (372)
+||+.+++.......+... +.+++|+ |||++|++++.|+
T Consensus 176 ~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEecCCCCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 9999998776544433332 4789999 9999999987665
Q ss_pred ---------eEEEEeccc-cc--------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 293 ---------LCKVNSVLL-LT--------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 293 ---------~i~vwd~~~-~~--------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|.+||+.+ .. .+...+..++| |||++|+++....- ..+..|.+||..+++....+..|
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCCceEEEEEcC
Confidence 788899865 32 35567899999 99999987642110 12577899999998876655544
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=2.9e-19 Score=170.47 Aligned_cols=240 Identities=13% Similarity=0.039 Sum_probs=168.2
Q ss_pred cCCCCcc---ccCCceeEeeeee--CCCCCccccCCCCceEEEEECC----CCCEEEEEeC-CCcEEEEeCCCCeEEEEe
Q 017421 93 YSGRGRF---SAADCCHMLSRYL--PVNGPWPVDQTTSRAYVSQFSA----DGSLFVAGFQ-ASQIRIYDVERGWKIQKD 162 (372)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~vwd~~~~~~~~~~ 162 (372)
+++++++ .+.+..+.+|+.. .......+. +...+..++|+| ||+++++++. +++|.|||..+++.+...
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 5666644 3444667777773 322223333 456789999999 9999988874 899999998877554432
Q ss_pred eecc----------------------------------------------------cCCcceEEEEECCCCCEEEEEe-C
Q 017421 163 ILAK----------------------------------------------------SLRWTVTDTSLSPDQRHLVYAS-M 189 (372)
Q Consensus 163 ~~~~----------------------------------------------------~~~~~v~~~~~~~~~~~l~~~~-~ 189 (372)
.... .+...+..+.|+|+++++++++ .
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~ 344 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN 344 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG
T ss_pred cccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC
Confidence 2100 0001133456777777665544 4
Q ss_pred CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEe-CCCeEEEEECCC-------Ce
Q 017421 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGS-SDDCIYVYDLEA-------NK 260 (372)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s-~dg~i~iwd~~~-------~~ 260 (372)
++.|.+||+.++++......... .|......+ ++|+ +..++++. .|++|.+||+.+ ++
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~------------ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~ 411 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKT------------PHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK 411 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSS------------BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS
T ss_pred CCeEEEEECCCCeEEEeeccCCC------------CCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCe
Confidence 67777777777765433321100 132222223 4787 66667775 579999999998 89
Q ss_pred EEEEeecCCCCeEEEEEeCCCCCEEEEEe-------CCCeEEEEeccccc---------------CCCCCeeEEEeccCC
Q 017421 261 LSLRILAHTSDVNTVCFGDESGHLIYSGS-------DDNLCKVNSVLLLT---------------RSINPCNKYLFNPCN 318 (372)
Q Consensus 261 ~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-------~dg~i~vwd~~~~~---------------~~~~~v~~~~~s~~g 318 (372)
++.++..|...+..++++ |++++|++++ .+++|.+||+.+++ .+...+..+.|+|+|
T Consensus 412 ~v~~l~~~g~~~~~v~~~-pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTH-PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp EEEEEECSCSCCCCEECC-TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred EEEEEEcCCCCceEEEcC-CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCC
Confidence 999999998888999999 9999999987 26799999997443 335678999999999
Q ss_pred CeEEEEeeeeEEEe-----eceEEEeecccceEEEEEeee
Q 017421 319 KYLIIYLILVISIY-----SPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 319 ~~l~~~~~~~~~~~-----d~~i~lw~~~~~~~~~~~~~h 353 (372)
+.+.++. | |+.|.+||..+++++..+..+
T Consensus 491 ~~~~~s~------~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 491 DEVWFSV------WNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp SEEEEEE------ECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred CEEEEEe------ecCCCCCCeEEEEECCCceEEEeecCC
Confidence 9998774 5 699999999999999887754
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.1e-18 Score=156.17 Aligned_cols=219 Identities=13% Similarity=0.071 Sum_probs=151.0
Q ss_pred CCceeEeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEeCC-CcEEEEeCC--CCeEEEEeeecccCCcceEEEE
Q 017421 102 ADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQA-SQIRIYDVE--RGWKIQKDILAKSLRWTVTDTS 176 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~--~~~~~~~~~~~~~~~~~v~~~~ 176 (372)
.+..+.+|+...... ......+...+.+++|+|++++|++++.+ +.|.+|++. ++..... .....+. .+..++
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ 90 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-AESALPG-SLTHIS 90 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEECSS-CCSEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec-cccccCC-CCcEEE
Confidence 355667777653221 22224577789999999999999888876 899999997 4432211 1122222 688999
Q ss_pred ECCCCCEEEEEeC-CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEEEE
Q 017421 177 LSPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVY 254 (372)
Q Consensus 177 ~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~iw 254 (372)
|+|+++++++++. ++.|.+||+..+.......... ....+.+++|+|+++++++++ .++.|.+|
T Consensus 91 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 91 TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--------------GLDGCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--------------CCTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--------------CCCCceEEEECCCCCEEEEecCCCCEEEEE
Confidence 9999998877765 8899999995332211111111 112578899999999888777 88999999
Q ss_pred ECCC-CeEEE----Eeec-CCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccc-------cc---------CCCCCeeE
Q 017421 255 DLEA-NKLSL----RILA-HTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLL-------LT---------RSINPCNK 311 (372)
Q Consensus 255 d~~~-~~~~~----~~~~-~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~-------~~---------~~~~~v~~ 311 (372)
|+.+ ++... .+.. ....+.+++|+ |+++++++++ .++.|.+||+.. .. .....+..
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 9987 64432 2232 34578899999 8998776555 789999999852 10 01234568
Q ss_pred EEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 312 YLFNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 312 ~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
++|+|+|++|+++.. .++.|.+|++.
T Consensus 236 i~~s~dg~~l~v~~~-----~~~~i~v~d~~ 261 (343)
T 1ri6_A 236 IHITPDGRHLYACDR-----TASLITVFSVS 261 (343)
T ss_dssp EEECTTSSEEEEEET-----TTTEEEEEEEC
T ss_pred eEECCCCCEEEEEec-----CCCEEEEEEEc
Confidence 999999998876531 36788888887
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=7.6e-19 Score=156.90 Aligned_cols=200 Identities=12% Similarity=0.015 Sum_probs=150.0
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeeccc--CCcceEEEEECCCCCEEEEEe------------CC
Q 017421 126 RAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKS--LRWTVTDTSLSPDQRHLVYAS------------MS 190 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------------~d 190 (372)
.+..++|+|+++.++ ++..++.|.+||+.+++.+........ +...+..++|+|++++++++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998764 555678999999998866554322110 122577899999999998886 57
Q ss_pred CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC-
Q 017421 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT- 269 (372)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~- 269 (372)
+.|.+||+.+++....... ...+..++|+|++++|+++ ++.|.+||+.+++....+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~ 175 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-----------------PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW 175 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-----------------CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT
T ss_pred ceEEEEECCCCcEEEEEeC-----------------CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc
Confidence 9999999988775433221 1246678899999988777 5789999998887665443221
Q ss_pred -----------------------------------------------------------------CCeEEEEEeCCCCCE
Q 017421 270 -----------------------------------------------------------------SDVNTVCFGDESGHL 284 (372)
Q Consensus 270 -----------------------------------------------------------------~~v~~~~~sp~~~~~ 284 (372)
..+.+++|+ |++++
T Consensus 176 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~ 254 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN-PAKTR 254 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC-TTSSE
T ss_pred CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEEC-CCCCE
Confidence 234568999 89999
Q ss_pred EEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421 285 IYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 285 l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
++++ ++.|.+||+.+.+ .....+.+++|+|+|++|+++. .++.|.+||+.+++.+..+..+
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~------~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG------ALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES------BSSEEEEEETTTCCEEEEEECG
T ss_pred EEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEc------CCCcEEEEECcCCcEEEEEEcC
Confidence 9888 7999999987432 2345678999999999888874 5899999999999988877554
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=1.8e-18 Score=154.50 Aligned_cols=218 Identities=8% Similarity=0.023 Sum_probs=153.2
Q ss_pred CCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCeE-EEEeeecccCCcceEEEEECC
Q 017421 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSP 179 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~ 179 (372)
.+..+.+|+....+....+..+...+ +++|+|+++++++++. ++.|.+||+.++.. ... ...+..+..+++|+|
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~s~ 93 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA---IQEGQSSMADVDITP 93 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE---EEECSSCCCCEEECT
T ss_pred CCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe---cccCCCCccceEECC
Confidence 34456666655554444455556667 9999999997766655 88999999988865 332 223333444499999
Q ss_pred CCCEEEEEeCCC---eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCe-EEEE
Q 017421 180 DQRHLVYASMSP---IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDC-IYVY 254 (372)
Q Consensus 180 ~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~-i~iw 254 (372)
++++++++..++ .|.+||+.+++...... ....+..++|+|+|++++ +...++. |.+|
T Consensus 94 dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-----------------IPYDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp TSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-----------------CCTTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred CCCEEEEecCCCCcccEEEEECCCCCeEEEEE-----------------CCCCccceEECCCCCEEEEEecCCCceEEEE
Confidence 999999555553 89999999887644322 112568999999998555 4455577 9999
Q ss_pred ECCCCeEE----EEeecCCCCeEEEEEeCCCCCEEEEE-eCCCeEEEEecccccC--------CCCCeeEEEeccCCCeE
Q 017421 255 DLEANKLS----LRILAHTSDVNTVCFGDESGHLIYSG-SDDNLCKVNSVLLLTR--------SINPCNKYLFNPCNKYL 321 (372)
Q Consensus 255 d~~~~~~~----~~~~~~~~~v~~~~~sp~~~~~l~s~-~~dg~i~vwd~~~~~~--------~~~~v~~~~~s~~g~~l 321 (372)
++.....+ .........+..++|+ |+|++++++ ..++.|++||+.+... ....+..++|+|+|+++
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 157 KIDADGVLFDTGQEFISGGTRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTV 235 (331)
T ss_dssp EECTTCCEEEEEEEEECSSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEE
T ss_pred EECCCCcEeecCCccccCCCCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEE
Confidence 98754322 1222345568999999 999866555 4689999999874332 34567889999999988
Q ss_pred EEEeeeeEEEeeceEEEeecccceE
Q 017421 322 IIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+++.. .++.|.+||..+++.
T Consensus 236 ~v~~~-----~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 236 YVLTE-----STVDVFNFNQLSGTL 255 (331)
T ss_dssp EEECS-----SEEEEEEEETTTTEE
T ss_pred EEEEc-----CCCEEEEEECCCCce
Confidence 77642 256688899988876
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=2.2e-19 Score=177.59 Aligned_cols=219 Identities=11% Similarity=0.064 Sum_probs=153.0
Q ss_pred cCCceeEeeeeeCCCCCccccCCCC---ceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEeeecccC
Q 017421 101 AADCCHMLSRYLPVNGPWPVDQTTS---RAYVSQFSADGSLFVAGFQA---------SQIRIYDVERGWKIQKDILAKSL 168 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~ 168 (372)
+.+..+.+|+.........+..|.. .|.+++|||||++|++++.+ +.|.+||+.++.. ........+
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~ 112 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVS 112 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCC
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccc
Confidence 3455778888777766666666654 49999999999999998764 7888999998754 222223344
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCC----CCccccEEEEEEcCCCCEEEE
Q 017421 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD----GGYSFGIFSLKFSTDGRELVA 244 (372)
Q Consensus 169 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~i~~~~~sp~~~~l~s 244 (372)
...+..++|+|||+.|++++. +.|++||+.+++...+.... .....+....+ ..-...+..++|+|||+.|++
T Consensus 113 ~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~--~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~ 189 (723)
T 1xfd_A 113 NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTG--KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAY 189 (723)
T ss_dssp SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCC--BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEE
T ss_pred cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCC--CCCceECcccceeEEEEeccCcceEEECCCCCEEEE
Confidence 445889999999999999886 79999999988764433211 00000000000 000013478999999999998
Q ss_pred EeCCC----------------------------------eEEEEECCCCeEEEEeecC------CCCeEEEEEeCCCCCE
Q 017421 245 GSSDD----------------------------------CIYVYDLEANKLSLRILAH------TSDVNTVCFGDESGHL 284 (372)
Q Consensus 245 ~s~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~~v~~~~~sp~~~~~ 284 (372)
++.++ .|++||+.+++....+..+ ...+..++|+ |||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S-pDg~~ 268 (723)
T 1xfd_A 190 AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA-TSTKV 268 (723)
T ss_dssp EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES-SSSEE
T ss_pred EEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe-CCCeE
Confidence 87543 7999999988765666544 5678999999 99998
Q ss_pred EEEEeC----CCeEEEEeccccc-------CCCCCe----eEEEeccCCCeEEEE
Q 017421 285 IYSGSD----DNLCKVNSVLLLT-------RSINPC----NKYLFNPCNKYLIIY 324 (372)
Q Consensus 285 l~s~~~----dg~i~vwd~~~~~-------~~~~~v----~~~~~s~~g~~l~~~ 324 (372)
|++.+. +..|++||+.+.. .+...+ ..++|+|||+.|+..
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 877653 3579999986432 222333 378999999988764
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=7.2e-19 Score=167.75 Aligned_cols=196 Identities=13% Similarity=0.045 Sum_probs=155.5
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC--CCCceeeecc
Q 017421 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV--GSGTMESLAN 208 (372)
Q Consensus 131 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~--~~~~~~~~~~ 208 (372)
+|+|++.++++++.|++|.+||..+++.+..... ++ .+..++|+||+++|++++.++.|.+||+ .+++......
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--ST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--Cc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 3889999999999999999999999877655321 32 2889999999999999999999999999 6766533222
Q ss_pred eeecccccceeccCCCCccccEEEEEEcC----CCCEEEEEeC-CCeEEEEECCCCeEEEEeecC-----------CCCe
Q 017421 209 VTEIHDGLDFSAADDGGYSFGIFSLKFST----DGRELVAGSS-DDCIYVYDLEANKLSLRILAH-----------TSDV 272 (372)
Q Consensus 209 ~~~~~~~~~~~~~~~~~h~~~i~~~~~sp----~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v 272 (372)
+...+..++|+| ||+++++++. +++|.+||..+++++.++..+ ...+
T Consensus 220 -----------------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 220 -----------------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp -----------------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred -----------------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 112578999999 9999988874 899999999999988887642 2378
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
.++.++|..+.++++...++.|.+||+.... .+...+..+.|+|+|++++++.. .+++|.+||..+++
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~-----~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAAN-----NSNKVAVIDSKDRR 357 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEG-----GGTEEEEEETTTTE
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEec-----CCCeEEEEECCCCe
Confidence 8999994345566777789999999986422 34556788999999998876631 37889999999999
Q ss_pred EEEEEee
Q 017421 346 TFYSFMV 352 (372)
Q Consensus 346 ~~~~~~~ 352 (372)
.+..+.+
T Consensus 358 l~~~i~~ 364 (543)
T 1nir_A 358 LSALVDV 364 (543)
T ss_dssp EEEEEEC
T ss_pred EEEeecc
Confidence 8877664
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=9.7e-20 Score=180.14 Aligned_cols=204 Identities=11% Similarity=0.039 Sum_probs=151.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc---ceEEEEECCCCCEEEEEeCC---------CeE
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASMS---------PIV 193 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------g~i 193 (372)
.+.+++|+|||+++++ +.||.|++||+.+++.... ...+.. .|.+++|+|||++|++++.+ +.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~---~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVL---IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEE---ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEE---eccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 4677899999997766 7899999999998855433 233332 48999999999999999764 788
Q ss_pred EEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe-
Q 017421 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV- 272 (372)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v- 272 (372)
++||+.+++...+... .+|...+..++|||||+.|+.++. +.|++||+.+++.......+...+
T Consensus 94 ~~~d~~~~~~~~l~~~--------------~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPP--------------EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp EEEESSSCCCEECCCT--------------TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTE
T ss_pred EEEECCCCceEeccCC--------------ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCce
Confidence 8999998875322211 124445888999999999999886 899999999887766555443333
Q ss_pred -----------------EEEEEeCCCCCEEEEEeCCC----------------------------------eEEEEeccc
Q 017421 273 -----------------NTVCFGDESGHLIYSGSDDN----------------------------------LCKVNSVLL 301 (372)
Q Consensus 273 -----------------~~~~~sp~~~~~l~s~~~dg----------------------------------~i~vwd~~~ 301 (372)
.+++|+ |||+.|++++.|+ .|++||+.+
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~ 237 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG 237 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS
T ss_pred ECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC
Confidence 789999 9999999887543 799999864
Q ss_pred cc------C------CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 302 LT------R------SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 302 ~~------~------~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
.. . +...+..++|+|||+++++..... ..+..|.+||+.+++....+.
T Consensus 238 ~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~i~~~d~~~g~~~~~~~ 297 (723)
T 1xfd_A 238 PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA--QNVSILTLCDATTGVCTKKHE 297 (723)
T ss_dssp SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT--SCEEEEEEEETTTCCEEEEEE
T ss_pred CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC--CCeEEEEEEeCCCCcceEEEE
Confidence 32 1 245688999999999887663211 124678899998887655443
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=5.8e-18 Score=152.43 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=149.8
Q ss_pred ceeEeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeEEEEeeec--cc-------CCcc
Q 017421 104 CCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILA--KS-------LRWT 171 (372)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~--~~-------~~~~ 171 (372)
..+.+|+...... ...+..+...+..++|+|+|++|++++ .++.|.+|++............ .+ ....
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCC
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCC
Confidence 4566777643321 122234677889999999999888887 6789999999632121111111 11 1124
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECC-CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE-EeCCC
Q 017421 172 VTDTSLSPDQRHLVYASMSPIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDD 249 (372)
Q Consensus 172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s-~s~dg 249 (372)
+.+++|+|+++++++...++.|.+|++. ++........... ....+..++|+|||+++++ ...++
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~-------------~g~~p~~~~~spdg~~l~v~~~~~~ 209 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTME-------------AGFGPRHLVFSPDGQYAFLAGELSS 209 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECC-------------TTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcC-------------CCCCCceEEECCCCCEEEEEeCCCC
Confidence 7889999999966666668899999998 4443222111110 1125778999999996655 55678
Q ss_pred eEEEEECCC--CeE--EEEeecCC------CCeEEEEEeCCCCCEE-EEEeCCCeEEEEecc---cc------cCCCCCe
Q 017421 250 CIYVYDLEA--NKL--SLRILAHT------SDVNTVCFGDESGHLI-YSGSDDNLCKVNSVL---LL------TRSINPC 309 (372)
Q Consensus 250 ~i~iwd~~~--~~~--~~~~~~~~------~~v~~~~~sp~~~~~l-~s~~~dg~i~vwd~~---~~------~~~~~~v 309 (372)
.|.+|++.. ++. +..+.... ..+..++|+ |+|++| ++...++.|.+|++. .+ ..+...+
T Consensus 210 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s-pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~ 288 (347)
T 3hfq_A 210 QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS-HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP 288 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC-TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC
T ss_pred EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC-CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc
Confidence 999999874 543 23333222 348899999 999977 455678999999986 11 1345568
Q ss_pred eEEEeccCCCeEEEEeeeeEEEeeceEEEe--ecccceEE
Q 017421 310 NKYLFNPCNKYLIIYLILVISIYSPNILLD--NYFLLRTF 347 (372)
Q Consensus 310 ~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw--~~~~~~~~ 347 (372)
..++|+|+|++|+++.. -++.+.+| |..+++..
T Consensus 289 ~~~~~spdg~~l~v~~~-----~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQ-----NTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEECTTSSEEEEEET-----TTTEEEEEEECTTTCCEE
T ss_pred CeEEECCCCCEEEEEEc-----CCCcEEEEEEeCCCCeEE
Confidence 89999999999887741 24778888 55566644
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=1.4e-17 Score=149.77 Aligned_cols=207 Identities=10% Similarity=0.065 Sum_probs=153.8
Q ss_pred CCceEEEEECCCCCEEEE-EeCCCcEEEEeCCCCeEEEEeeecccC------CcceEEEEECCCCCEEEEEe--CCCeEE
Q 017421 124 TSRAYVSQFSADGSLFVA-GFQASQIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQRHLVYAS--MSPIVH 194 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~--~dg~i~ 194 (372)
...+.+++|+|+|+++++ ...++.|.+||+.+++.+......... ...+.++.|+|+++++++++ .++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 445778999999996554 555799999999988765543321111 01268899999999887776 478899
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec----CCC
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA----HTS 270 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~ 270 (372)
+||..+++....... +...+..++|+|+++++++++.++.|.+||+.+++....+.. +..
T Consensus 168 ~~d~~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQN----------------TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp EEETTTTEEEEEECC----------------CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred EEcCCCCceEEEecC----------------CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 999998876443321 112467889999999999999999999999999998877764 455
Q ss_pred CeEEEEEeCCCCCEEEEEeC-CCeEEEEecccccC----CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 271 DVNTVCFGDESGHLIYSGSD-DNLCKVNSVLLLTR----SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~~~~~~----~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
.+..++|+ |+++.+++++. ++.|.+||+.+.+. .......++|+|+|++++++.. .++.|.+||..+++
T Consensus 232 ~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 232 FFINISLD-TARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR-----QAGKVSVIDAKSYK 305 (353)
T ss_dssp CEEEEEEE-TTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET-----TTTEEEEEETTTTE
T ss_pred ccceEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC-----CCCeEEEEECCCCe
Confidence 68889999 88887776664 59999999874320 1112367999999997776631 36889999999888
Q ss_pred EEEEEee
Q 017421 346 TFYSFMV 352 (372)
Q Consensus 346 ~~~~~~~ 352 (372)
.+..+..
T Consensus 306 ~~~~~~~ 312 (353)
T 3vgz_A 306 VVKTFDT 312 (353)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8776644
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=9.1e-19 Score=153.07 Aligned_cols=210 Identities=14% Similarity=0.022 Sum_probs=149.3
Q ss_pred cCCCCcc--ccCCceeEeeeeeC-CCCCccccCC-CCceEEEEECCCCCEEEEEeC--CC--cEEEEeCCCCeEEEEeee
Q 017421 93 YSGRGRF--SAADCCHMLSRYLP-VNGPWPVDQT-TSRAYVSQFSADGSLFVAGFQ--AS--QIRIYDVERGWKIQKDIL 164 (372)
Q Consensus 93 ~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~--dg--~i~vwd~~~~~~~~~~~~ 164 (372)
+++++.+ ...+..+.+|+... .........+ ...+.+++|+|++++|++++. ++ .|.++++.++.. ..
T Consensus 49 ~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~--- 124 (297)
T 2ojh_A 49 WSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RL--- 124 (297)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EE---
T ss_pred ECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EE---
Confidence 3444432 33455677777665 4444444444 477899999999999999883 34 444455555432 11
Q ss_pred cccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECC--CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCE
Q 017421 165 AKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVG--SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE 241 (372)
Q Consensus 165 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 241 (372)
...+. .+..++|+|+++.|+ ++..++.+.+|++. ++...... .+...+.+++|+|++++
T Consensus 125 ~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 125 MTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-----------------HGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp CCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-----------------CSSSCEEEEEECTTSSE
T ss_pred eecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-----------------cCCCccccceECCCCCE
Confidence 22222 488899999999887 67788989999864 33322111 23457899999999998
Q ss_pred EEEEe-CCCeEEEEECC-CCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC-----------CeEEEEecccc------
Q 017421 242 LVAGS-SDDCIYVYDLE-ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD-----------NLCKVNSVLLL------ 302 (372)
Q Consensus 242 l~s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----------g~i~vwd~~~~------ 302 (372)
|++++ .++.+.+|++. .+.....+..|...+.+++|+ |++++|++++.+ +.|.+||+...
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPS-PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEEC-TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEEC-CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 87766 48889999886 455667777788889999999 999999888765 56999998632
Q ss_pred --cCCCCCeeEEEeccCCCeEEEEe
Q 017421 303 --TRSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 303 --~~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
..+...+..++|+|+|++|++++
T Consensus 266 ~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 266 DLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ccCCCCcccccceECCCCCEEEEEE
Confidence 15667889999999999998775
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=4.6e-18 Score=152.68 Aligned_cols=225 Identities=11% Similarity=0.003 Sum_probs=156.6
Q ss_pred CceeEeeeeeCCCCCccccCCC-CceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccC---CcceEEEEE
Q 017421 103 DCCHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSL---RWTVTDTSL 177 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~v~~~~~ 177 (372)
+..+.+|+.........+..+. ..+..++|+|++++++ ++..++.|.+||+.+++........... ...+..++|
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 99 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEE
Confidence 3445555543333222333222 2578899999998665 5556899999999988665443221100 223788999
Q ss_pred CCCCCEEEEEeCC------------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE
Q 017421 178 SPDQRHLVYASMS------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (372)
Q Consensus 178 ~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~ 245 (372)
+|+++++++++.+ +.|.+||+.+++......... +...+.+++|+|+|+ ++++
T Consensus 100 spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 100 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--------------MPRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--------------CCSSCCCEEECTTSC-EEEE
T ss_pred CCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--------------CCCcccceeECCCCc-EEEc
Confidence 9999999998865 899999998765432222111 112578899999999 5555
Q ss_pred eCCCeEEEEECCCCeEEEEeecCC--------------------------------------------------------
Q 017421 246 SSDDCIYVYDLEANKLSLRILAHT-------------------------------------------------------- 269 (372)
Q Consensus 246 s~dg~i~iwd~~~~~~~~~~~~~~-------------------------------------------------------- 269 (372)
+ +.|.+||+.+++....+..+.
T Consensus 165 ~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 242 (349)
T 1jmx_B 165 G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 242 (349)
T ss_dssp S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred c--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccC
Confidence 4 349999999888766654321
Q ss_pred ------------CCeEEEEEeCC-CCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 270 ------------SDVNTVCFGDE-SGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 270 ------------~~v~~~~~sp~-~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
..+.+++|+ | ++++++++ ++.|.+||+.+.+ .....+.+++|+|+|++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~s-p~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~------ 313 (349)
T 1jmx_B 243 GKTHTQEFADLTELYFTGLRS-PKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG------ 313 (349)
T ss_dssp CCEEEEEEEECSSCEEEEEEC-SSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES------
T ss_pred CcEEecccccCCCcceeeEec-CCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEec------
Confidence 134567788 7 99998888 8899999997433 2344578999999999888764
Q ss_pred eeceEEEeecccceEEEEEeee
Q 017421 332 YSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 332 ~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.++.|.+||..+++.+..+...
T Consensus 314 ~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp BSSEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEeccccceeeeeecC
Confidence 4789999999999988877553
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2e-17 Score=148.77 Aligned_cols=212 Identities=10% Similarity=0.029 Sum_probs=159.0
Q ss_pred CCceEEEEECCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEE
Q 017421 124 TSRAYVSQFSADGSLFVAGFQ-------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHI 195 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v 195 (372)
...+..++|+|+++++++++. ++.|.+||..+++.+..... ...+..+.|+|++++++++ ..++.|.+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 456889999999998888774 56899999998866655332 2247789999999966555 55799999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCCCCeE
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVN 273 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~v~ 273 (372)
||..+++............ ...+....+.+++|+|+++++++++ .++.|.+||+.+++....+..+...+.
T Consensus 116 ~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKR-------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp EETTTCCEEEEEESCCCCC-------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred EeCCCCeeEEEEecCCCcc-------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 9999988644433211100 0000111378899999999887765 478899999999998888875666788
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEeccccc----------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 274 TVCFGDESGHLIYSGSDDNLCKVNSVLLLT----------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~----------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
+++|+ |+++.+++++.++.|.+||+.+.+ .+...+..++|+|+|++++++.. .++.|.+||..+
T Consensus 189 ~~~~s-~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~ 262 (353)
T 3vgz_A 189 GLALD-SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRN 262 (353)
T ss_dssp CCEEE-TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTT
T ss_pred eEEEC-CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCC
Confidence 99999 999999999999999999987432 23445778999999998877641 247889999998
Q ss_pred ceEEEEEee
Q 017421 344 LRTFYSFMV 352 (372)
Q Consensus 344 ~~~~~~~~~ 352 (372)
++.+..+..
T Consensus 263 ~~~~~~~~~ 271 (353)
T 3vgz_A 263 GNILAKVAA 271 (353)
T ss_dssp CCEEEEEEC
T ss_pred CcEEEEEEc
Confidence 887766643
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=1.8e-17 Score=148.23 Aligned_cols=218 Identities=16% Similarity=0.168 Sum_probs=146.0
Q ss_pred ceeEeeeeeCCCCC----ccccCCCCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 104 CCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 104 ~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
..+.+|...+.... ..+.. ...+..++|+|++++|++++. ++.|.+|++..+........... ...+.+++|+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s 137 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANIS 137 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEEC
T ss_pred CeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEEC
Confidence 56667776532211 12222 337889999999998876655 78899999954322222222222 2358899999
Q ss_pred CCCCEEEEEe-CCCeEEEEECCC-Cceeeec--ceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEEE
Q 017421 179 PDQRHLVYAS-MSPIVHIVDVGS-GTMESLA--NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYV 253 (372)
Q Consensus 179 ~~~~~l~~~~-~dg~i~vwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~i 253 (372)
|+++++++++ .++.|.+||+.+ ++..... .... .....+..++|+|+++++++++ .++.|.+
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~ 204 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT-------------VEGAGPRHMVFHPNEQYAYCVNELNSSVDV 204 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC-------------STTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc-------------CCCCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 9999888887 799999999987 5443222 1111 0123678899999999776554 7899999
Q ss_pred EECCC--CeE--EEEee---cC---CCCeEEEEEeCCCCCEEEEE-eCCCeEEEEecc----ccc-----CCCCCeeEEE
Q 017421 254 YDLEA--NKL--SLRIL---AH---TSDVNTVCFGDESGHLIYSG-SDDNLCKVNSVL----LLT-----RSINPCNKYL 313 (372)
Q Consensus 254 wd~~~--~~~--~~~~~---~~---~~~v~~~~~sp~~~~~l~s~-~~dg~i~vwd~~----~~~-----~~~~~v~~~~ 313 (372)
||+.. ++. ...+. .. ...+.+++|+ |++++|+++ ..++.|.+||+. ... .....+..++
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s-~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 283 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT-PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFN 283 (343)
T ss_dssp EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEE
T ss_pred EEecCCCCcEEEEeeccccCccccccCCccceEEC-CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEE
Confidence 99953 432 22222 11 2356789999 889877754 478999999997 211 1223488999
Q ss_pred eccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 314 FNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 314 ~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
|+|+|++|+++.. .++.+.+|++.
T Consensus 284 ~s~dg~~l~~~~~-----~~~~v~v~~~d 307 (343)
T 1ri6_A 284 VDHSGKYLIAAGQ-----KSHHISVYEIV 307 (343)
T ss_dssp ECTTSSEEEEECT-----TTCEEEEEEEE
T ss_pred ECCCCCEEEEecC-----CCCeEEEEEEc
Confidence 9999998888742 25778888544
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.80 E-value=7.3e-18 Score=150.53 Aligned_cols=221 Identities=12% Similarity=0.027 Sum_probs=152.1
Q ss_pred CceeEeeeeeCCCC-CccccCCCCceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 103 DCCHMLSRYLPVNG-PWPVDQTTSRAYVSQFSADGSLFVAGFQAS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 103 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
+..+.+++...... ...+..+..+..+++|+|+|++|+++..++ .|.+||+.+++.+.... . ...+.+++|+
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~-~~~~~~~~~s 136 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP---I-PYDAVGIAIS 136 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE---C-CTTEEEEEEC
T ss_pred CCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE---C-CCCccceEEC
Confidence 34555665554444 444555666666699999999998555543 89999999886655422 1 2246899999
Q ss_pred CCCCEEEEE-eCCCe-EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE-EeCCCeEEEEE
Q 017421 179 PDQRHLVYA-SMSPI-VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYD 255 (372)
Q Consensus 179 ~~~~~l~~~-~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s-~s~dg~i~iwd 255 (372)
|++++++++ ..++. |.+|++.............. .....+..++|+|+|+++++ +..++.|.+||
T Consensus 137 pdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 204 (331)
T 3u4y_A 137 PNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI------------SGGTRPFNITFTPDGNFAFVANLIGNSIGILE 204 (331)
T ss_dssp TTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE------------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc------------cCCCCccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 999866555 55578 99999986543211110000 01235789999999996654 45689999999
Q ss_pred CCCCeE---EEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEecccccC------------CCCC---eeEEEecc
Q 017421 256 LEANKL---SLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLLTR------------SINP---CNKYLFNP 316 (372)
Q Consensus 256 ~~~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~~------------~~~~---v~~~~~s~ 316 (372)
+.+++. +..+.. ...+..++|+ |+|+++++++ .++.|.+||+.+.+. ...+ +..++|+|
T Consensus 205 ~~~~~~~~~~~~~~~-~~~~~~~~~s-pdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 282 (331)
T 3u4y_A 205 TQNPENITLLNAVGT-NNLPGTIVVS-RDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNK 282 (331)
T ss_dssp CSSTTSCEEEEEEEC-SSCCCCEEEC-TTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECT
T ss_pred CCCCcccceeeeccC-CCCCceEEEC-CCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECC
Confidence 998887 777764 4667899999 9999776654 578899999874221 1112 24589999
Q ss_pred CCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 317 CNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 317 ~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+|++|+++.. .++.|.+||+.....
T Consensus 283 dg~~l~v~~~-----~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 283 TETKLFISAN-----ISRELKVFTISGKVV 307 (331)
T ss_dssp TSSEEEEEET-----TTTEEEEEETTSCEE
T ss_pred CCCEEEEecC-----CCCcEEEEEecCCcc
Confidence 9999876642 256899999876543
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=3.2e-17 Score=147.49 Aligned_cols=227 Identities=11% Similarity=0.038 Sum_probs=149.3
Q ss_pred CceeEeeeeeCCCCCc---cccCCCCceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCeEEEEeeecccCCcceEEEE
Q 017421 103 DCCHMLSRYLPVNGPW---PVDQTTSRAYVSQFSADGSLFVAGFQ---ASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (372)
++.+.+|.+....... ....+...+..++|+|||+ |++++. ++.|.+|++.++... .......+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~-~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH-KLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE-EEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE-EeeeeecCCCCCEEEE
Confidence 4556677776543322 2234556788899999999 555443 689999999776432 2122223445688999
Q ss_pred ECCCCCEEEEEe-CCCeEEEEECCC-CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEE
Q 017421 177 LSPDQRHLVYAS-MSPIVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (372)
Q Consensus 177 ~~~~~~~l~~~~-~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iw 254 (372)
|+|++++|++++ .++.|.+|++.. +.............+ +. ...+...+.+++|+|+|+++++...++.|.+|
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~----p~-~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHG----PR-PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCC----SS-TTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCC----CC-ccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 999999988887 679999999963 333222221110000 00 01123468899999999966666778899999
Q ss_pred ECC-CCeEE--EEeec-CCCCeEEEEEeCCCCCEEEE-EeCCCeEEEEeccc--c--------cCCC------CCeeEEE
Q 017421 255 DLE-ANKLS--LRILA-HTSDVNTVCFGDESGHLIYS-GSDDNLCKVNSVLL--L--------TRSI------NPCNKYL 313 (372)
Q Consensus 255 d~~-~~~~~--~~~~~-~~~~v~~~~~sp~~~~~l~s-~~~dg~i~vwd~~~--~--------~~~~------~~v~~~~ 313 (372)
|+. +++.. ..+.. ....+..++|+ |+|+++++ ...++.|.+|++.. . .... ..+..++
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR 246 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE
Confidence 998 55432 22222 23367889999 99996665 45688999999763 1 1111 3478899
Q ss_pred eccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 314 FNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 314 ~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
|+|||++|+++.. .++.|.+|++.
T Consensus 247 ~spdG~~l~v~~~-----~~~~v~v~~~~ 270 (347)
T 3hfq_A 247 LSHDGHFLYVSNR-----GYNTLAVFAVT 270 (347)
T ss_dssp ECTTSCEEEEEEE-----TTTEEEEEEEC
T ss_pred ECCCCCEEEEEeC-----CCCEEEEEEEC
Confidence 9999998866531 36778888876
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=5.7e-18 Score=167.92 Aligned_cols=228 Identities=11% Similarity=0.053 Sum_probs=163.8
Q ss_pred CccCCCCcc--ccCCceeEeeeeeCCC--CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc
Q 017421 91 GNYSGRGRF--SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (372)
Q Consensus 91 ~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 166 (372)
..+++++.+ ......+.+|+..... ....+..|...+..++|||||++|++++. +.|++||+.++..... ..
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~---~~ 189 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL---TA 189 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC---CC
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe---cc
Confidence 345666643 2333566677665542 45667788889999999999999998875 6899999998754432 11
Q ss_pred cCCc----------------ceEEEEECCCCCEEEEEeCCC---------------------------------eEEEEE
Q 017421 167 SLRW----------------TVTDTSLSPDQRHLVYASMSP---------------------------------IVHIVD 197 (372)
Q Consensus 167 ~~~~----------------~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~vwd 197 (372)
.+.. .+.++.|+|||++|++++.|+ .|++||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 1111 147799999999999987765 788899
Q ss_pred CCC-CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCeEEEEeecCCC-
Q 017421 198 VGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-----DDCIYVYDLEANKLSLRILAHTS- 270 (372)
Q Consensus 198 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~- 270 (372)
+.+ ++....... ..|...+..++| |||++|++++. +..|++||+.+++....+..+..
T Consensus 270 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 334 (741)
T 2ecf_A 270 PAEQAQTQWIDLG--------------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT 334 (741)
T ss_dssp SSTTCCCEEECCC--------------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCCCCceEEecCC--------------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC
Confidence 988 764332211 024568999999 99999987654 56799999999987776665543
Q ss_pred ---CeEEEEEeCCCCCEEEEEeCCCeEEEEecc------cccCCCCCeeEE-EeccCCCeEEEEeeeeEEEeec--eEEE
Q 017421 271 ---DVNTVCFGDESGHLIYSGSDDNLCKVNSVL------LLTRSINPCNKY-LFNPCNKYLIIYLILVISIYSP--NILL 338 (372)
Q Consensus 271 ---~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~------~~~~~~~~v~~~-~~s~~g~~l~~~~~~~~~~~d~--~i~l 338 (372)
.+..++|+ |+|+++++++.||.++||.+. .+..+...+..+ .|+|+|+.|+.... .++ .++|
T Consensus 335 ~~~~~~~~~~s-pdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~-----~~~~~~~~l 408 (741)
T 2ecf_A 335 WVPLHNSLRFL-DDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAG-----IESARESQI 408 (741)
T ss_dssp CCCCCSCCEEC-TTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEEC-----SSCTTCBEE
T ss_pred cCCcCCceEEC-CCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEe-----CCCCceEEE
Confidence 45689999 899999999999988888764 233566677777 59999998765531 233 6777
Q ss_pred eeccc
Q 017421 339 DNYFL 343 (372)
Q Consensus 339 w~~~~ 343 (372)
|++..
T Consensus 409 ~~~~~ 413 (741)
T 2ecf_A 409 YAVPL 413 (741)
T ss_dssp EEEET
T ss_pred EEEEc
Confidence 77754
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=1.9e-17 Score=163.31 Aligned_cols=238 Identities=15% Similarity=0.101 Sum_probs=162.3
Q ss_pred ccCCCCcc--ccCCceeEeeeeeC-----CCCCccccCCCCc--------------eEEEEECCCCCEEEEEe-------
Q 017421 92 NYSGRGRF--SAADCCHMLSRYLP-----VNGPWPVDQTTSR--------------AYVSQFSADGSLFVAGF------- 143 (372)
Q Consensus 92 ~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--------------v~~~~~s~~~~~l~~~~------- 143 (372)
.+++++.. ...+..+.+|+... .........+... +.+++|+|||++|++++
T Consensus 127 ~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~ 206 (706)
T 2z3z_A 127 DFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK 206 (706)
T ss_dssp EECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC
T ss_pred cCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc
Confidence 35666532 34456677777655 4333223333332 58899999999999987
Q ss_pred --------------------------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC-----e
Q 017421 144 --------------------------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-----I 192 (372)
Q Consensus 144 --------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~ 192 (372)
.+..|++||+.++..... .....+...+..++|+||++.|++++.++ .
T Consensus 207 ~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 285 (706)
T 2z3z_A 207 PTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL-QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECK 285 (706)
T ss_dssp CEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC-CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEE
T ss_pred eEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee-ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeE
Confidence 346799999998854332 22234556799999999999999887765 8
Q ss_pred EEEEECCCC-ceeeecceeecccccceeccCCCCccccEEEEEEcC--CCCEEEEEeCCCeEEEEECC-CCeEEEEeecC
Q 017421 193 VHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLE-ANKLSLRILAH 268 (372)
Q Consensus 193 i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp--~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~ 268 (372)
|++||+.++ ....+.... .. .....+..++|+| ||+++++++.++.+++|++. ++..+..+..+
T Consensus 286 v~~~d~~~g~~~~~~~~~~--~~----------~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 286 VNAYDAETGRFVRTLFVET--DK----------HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEEETTTCCEEEEEEEEE--CS----------SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEEECCCCceeeEEEEcc--CC----------CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 999999988 332222110 00 0111346789999 99999999999999999876 56677788878
Q ss_pred CCCeEE-EEEeCCCCCEEEEEeC-CC----eEEEEeccccc----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEE
Q 017421 269 TSDVNT-VCFGDESGHLIYSGSD-DN----LCKVNSVLLLT----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILL 338 (372)
Q Consensus 269 ~~~v~~-~~~sp~~~~~l~s~~~-dg----~i~vwd~~~~~----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~l 338 (372)
...+.. ++|+ |+++.|+.++. ++ .|..||+.... .+...+.+++|+|||++++...... ...+.+.+
T Consensus 354 ~~~v~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~--~~p~~i~l 430 (706)
T 2z3z_A 354 EWEVTNFAGFD-PKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSP--TVPRKVTV 430 (706)
T ss_dssp SSCEEEEEEEC-TTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECS--SCSCEEEE
T ss_pred CeEEEeeeEEc-CCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCC--CCCcEEEE
Confidence 778877 7999 88887766554 44 56666654321 3556789999999999988663110 01155888
Q ss_pred eecccce
Q 017421 339 DNYFLLR 345 (372)
Q Consensus 339 w~~~~~~ 345 (372)
||..+++
T Consensus 431 ~d~~~~~ 437 (706)
T 2z3z_A 431 TNIGKGS 437 (706)
T ss_dssp EESSSCE
T ss_pred EECCCCe
Confidence 8887776
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.78 E-value=5.4e-18 Score=167.21 Aligned_cols=210 Identities=11% Similarity=-0.012 Sum_probs=147.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC----
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS---- 200 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---- 200 (372)
..|.+++|+|| +.++.+. ++.|++||+.+++... ...+...+.+++|+|||+.|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~----l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY----LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE----EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE----ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 56999999999 6666654 5999999999885433 22344568889999999999985 679999999988
Q ss_pred -Cceeeecceeecc--cccceeccCCCCccccEEEEEEcCCCCEEEEEe-------------------------------
Q 017421 201 -GTMESLANVTEIH--DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------------------------------- 246 (372)
Q Consensus 201 -~~~~~~~~~~~~~--~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s------------------------------- 246 (372)
++...+....... .+.. ....+...+.++.|+|||++|++++
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~----~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQA----VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp CCCCEESCSCCBTTEEESSC----CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred CCCcEEeccCCCCCeEcccc----hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 7654332211100 0000 0000112357899999999999887
Q ss_pred --CCCeEEEEECCCCeEEEEee--cCCCCeEEEEEeCCCCCEEEEEeCCC-----eEEEEecccc-c-------CCCC--
Q 017421 247 --SDDCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDN-----LCKVNSVLLL-T-------RSIN-- 307 (372)
Q Consensus 247 --~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~dg-----~i~vwd~~~~-~-------~~~~-- 307 (372)
.+..|++||+.+++...... .|...+.+++|+ |||+.|++++.++ .|++||+.+. . ....
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 34679999999987654432 466789999999 9999999887665 8999998754 1 1121
Q ss_pred -CeeEEEecc--CCCeEEEEeeeeEEEeeceEEEeecc-cceEEEEEee
Q 017421 308 -PCNKYLFNP--CNKYLIIYLILVISIYSPNILLDNYF-LLRTFYSFMV 352 (372)
Q Consensus 308 -~v~~~~~s~--~g~~l~~~~~~~~~~~d~~i~lw~~~-~~~~~~~~~~ 352 (372)
.+..++|+| ||++++++. .|+.++||.+. +++.+..+..
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~------~~g~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSR------RDGWNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEEC------TTSSCEEEEEETTSCEEEECCC
T ss_pred CccCCceeecCCCCEEEEEEc------cCCccEEEEEECCCCEEEecCC
Confidence 246789999 999887764 35667777775 5555554433
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=2.5e-17 Score=169.31 Aligned_cols=223 Identities=11% Similarity=0.045 Sum_probs=164.7
Q ss_pred ceeEeeeeeC-CCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeec--------ccCCcceEE
Q 017421 104 CCHMLSRYLP-VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA--------KSLRWTVTD 174 (372)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--------~~~~~~v~~ 174 (372)
....+|.... ......+..|. .+..++|+|||+.|+.+. ++.|++|++... .+...... ..+...+.+
T Consensus 224 g~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 224 GFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp SSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGE
T ss_pred CceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCce-EeeeeccCcccccccccccccccce
Confidence 4456676654 33444555555 467789999999998874 799999999544 33221110 013346899
Q ss_pred EEEC-CCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccc-cEEEEEEcCCCCEEEEEeCCCeEE
Q 017421 175 TSLS-PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF-GIFSLKFSTDGRELVAGSSDDCIY 252 (372)
Q Consensus 175 ~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~sp~~~~l~s~s~dg~i~ 252 (372)
++|+ |||+.|++++ ++.|.+|++.++...... .|.. .+..++|+ ||+.|++++.+..+.
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~s-dg~~l~~~s~~~~l~ 361 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVP-----------------EPLRIRYVRRGGD-TKVAFIHGTREGDFL 361 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTSSBEEECS-----------------CCSCEEEEEECSS-SEEEEEEEETTEEEE
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCCCceEEcc-----------------CCCcceEEeeeEc-CCCeEEEEECCCceE
Confidence 9999 9999999888 789999999877643321 2334 78999999 999999998888899
Q ss_pred -EEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEEe
Q 017421 253 -VYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 253 -iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
+||+.+++.. .+..|...+..++|+ |+|++|++++.++.|++||+.+. ..+...+..++|+|||++|+.+.
T Consensus 362 ~~~d~~~~~~~-~l~~~~~~~~~~~~S-pDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 362 GIYDYRTGKAE-KFEENLGNVFAMGVD-RNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp EEEETTTCCEE-ECCCCCCSEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred EEEECCCCCce-EecCCccceeeeEEC-CCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEe
Confidence 9999887654 444788899999999 99999999999999999999742 26778889999999999998774
Q ss_pred eee----EEEeeceEEEeecccceEEEEEe
Q 017421 326 ILV----ISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 326 ~~~----~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
... ....+..|++||+.+++ +..+.
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~ 468 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRK-IFAAT 468 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTE-EEECS
T ss_pred cCccccccCCCCCeEEEEECCCCc-EEEee
Confidence 210 00013589999998876 44443
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=2.1e-17 Score=169.89 Aligned_cols=178 Identities=16% Similarity=0.120 Sum_probs=148.2
Q ss_pred CCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc-ceEEEEECCCCCEEEEEeCCCeEE-EEECCC
Q 017421 124 TSRAYVSQFS-ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-TVTDTSLSPDQRHLVYASMSPIVH-IVDVGS 200 (372)
Q Consensus 124 ~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-vwd~~~ 200 (372)
...+.+++|+ |||++|++++ ++.|.+|++..+.... ...+.. .+..++|+ |++.|++++.++.+. +||+.+
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE----CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred ccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE----ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 4478999999 9999999887 6899999998774332 344555 78999999 999999999888898 999987
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 280 (372)
+....+. +|...+..++|+|||++|++++.++.|++||+.+++.......|...+.+++|+ |
T Consensus 369 ~~~~~l~-----------------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S-p 430 (1045)
T 1k32_A 369 GKAEKFE-----------------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS-D 430 (1045)
T ss_dssp CCEEECC-----------------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC-T
T ss_pred CCceEec-----------------CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC-C
Confidence 7643222 244579999999999999999999999999999998877777899999999999 9
Q ss_pred CCCEEEEEeCCC----------eEEEEeccc-----ccCCCCCeeEEEeccCCCeEEEEe
Q 017421 281 SGHLIYSGSDDN----------LCKVNSVLL-----LTRSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 281 ~~~~l~s~~~dg----------~i~vwd~~~-----~~~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
||++|++++.++ .|++||+.. +..+...+..++|+|||++|+.++
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 999998887654 899999863 346667788999999999998775
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=1.9e-15 Score=136.74 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=148.3
Q ss_pred CCceeEeeeeeCCCCCcc-c-cCCCCceEEEEECCCCCEEEEEeCC----CcEEEEeCCCC-eEEEEeeecccCCcceEE
Q 017421 102 ADCCHMLSRYLPVNGPWP-V-DQTTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERG-WKIQKDILAKSLRWTVTD 174 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~-~-~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~vwd~~~~-~~~~~~~~~~~~~~~v~~ 174 (372)
.+..+.+|.+.+...... + ..+...+..++|+|||++|++++.+ +.|.+|++... ..+........+...+..
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 345667777765432211 1 1166778889999999999988875 79999988753 122222222233345677
Q ss_pred EEECCCCCEEEEEe-CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEE
Q 017421 175 TSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIY 252 (372)
Q Consensus 175 ~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~ 252 (372)
+++ ++++|++++ .++.|.+|++..............+.+. .+.....+...+.+++|+|+|+++++++ .++.|.
T Consensus 105 ~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 105 LTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGS--GPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCC--CSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCC--CCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 777 788877776 5789999999764432211111111110 0111112334578899999999776555 478999
Q ss_pred EEECCCCeE------E-------EEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEecccc-----------cCCCC
Q 017421 253 VYDLEANKL------S-------LRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLL-----------TRSIN 307 (372)
Q Consensus 253 iwd~~~~~~------~-------~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~-----------~~~~~ 307 (372)
+|++..... + .....+...+..++|+ |+|+++++++ .++.|.+||+... ..+..
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC
Confidence 999875431 1 1122345568899999 9999888777 6899999998621 12234
Q ss_pred CeeEEEeccCCCeEEEEeeeeEEEe-eceEEEeecc
Q 017421 308 PCNKYLFNPCNKYLIIYLILVISIY-SPNILLDNYF 342 (372)
Q Consensus 308 ~v~~~~~s~~g~~l~~~~~~~~~~~-d~~i~lw~~~ 342 (372)
.+..++|+|||++|+++.. . ++.|.+|++.
T Consensus 260 ~~~~i~~spdg~~l~v~~~-----~~~~~i~v~~~~ 290 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNR-----LKADGVAIFKVD 290 (361)
T ss_dssp CEEEEEECTTSSEEEEEEC-----SSSCEEEEEEEC
T ss_pred CcccEEECCCCCEEEEECC-----CCCCEEEEEEEc
Confidence 4679999999999876631 1 3667788774
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=164.74 Aligned_cols=194 Identities=12% Similarity=0.101 Sum_probs=139.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc---ceEEEEECCCCCEEEEEeC---------CCeEEEE
Q 017421 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASM---------SPIVHIV 196 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------dg~i~vw 196 (372)
.++|+|+|++++ .+.|+.|++||+.+++.... ...+.. .+.+++|+|||++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTI---LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEE---ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEE---EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 578999996544 45689999999998865432 222222 3889999999999998876 6899999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecCCCCe---
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDV--- 272 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~v--- 272 (372)
|+.+++......+. ..+..++|||||+.|+.+. ++.|++||+.+++..... .++...|
T Consensus 96 d~~~g~~~~~~~l~-----------------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 96 DLSNGEFVRGNELP-----------------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp ETTTTEECCSSCCC-----------------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred ECCCCccccceecC-----------------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 99988752111111 1578899999999999886 789999999988764332 2232222
Q ss_pred --------------EEEEEeCCCCCEEEEEeCCC----------------------------------eEEEEeccccc-
Q 017421 273 --------------NTVCFGDESGHLIYSGSDDN----------------------------------LCKVNSVLLLT- 303 (372)
Q Consensus 273 --------------~~~~~sp~~~~~l~s~~~dg----------------------------------~i~vwd~~~~~- 303 (372)
.+++|+ |||+.|++++.|. .|++||+....
T Consensus 158 ~~~~v~~ee~~~~~~~~~wS-PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWS-PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEEC-TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred cccceeeeecccCcccEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 489999 9999999987552 78899987432
Q ss_pred -------------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEee----cccceEE
Q 017421 304 -------------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDN----YFLLRTF 347 (372)
Q Consensus 304 -------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~----~~~~~~~ 347 (372)
.+...+.+++|+||++++++..+.. .....|.+|| +.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~--~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRV--QNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESS--TTEEEEEEEEECSSSSSEECC
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccc--cCeEEEEEEcccCCCCCCceE
Confidence 3666789999999988776643211 0013477788 6666543
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=6.9e-18 Score=166.82 Aligned_cols=209 Identities=12% Similarity=0.045 Sum_probs=142.8
Q ss_pred CCceeEeeeeeCCCCCccccCCCC---ceEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEeeecccCC
Q 017421 102 ADCCHMLSRYLPVNGPWPVDQTTS---RAYVSQFSADGSLFVAGFQ---------ASQIRIYDVERGWKIQKDILAKSLR 169 (372)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~ 169 (372)
.+..+.+|+.........+.+|.. .+.+++|||||++|++++. ++.|++||+.+++.+... .. .
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l---~ 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-EL---P 109 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CC---C
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ec---C
Confidence 355667777655554444443332 3889999999999998876 689999999988542101 11 1
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccc---------cEEEEEEcCCCC
Q 017421 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF---------GIFSLKFSTDGR 240 (372)
Q Consensus 170 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~i~~~~~sp~~~ 240 (372)
..+..++|+|||+.|+++. ++.|++|++.+++...+... ......+. |+.. ....++|+|||+
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~--~~~~~v~~-----g~~~~v~~ee~~~~~~~~~wSPDG~ 181 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN--GRENKIFN-----GIPDWVYEEEMLATKYALWWSPNGK 181 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC--CBTTTEEE-----SSCCHHHHHHTTCSSCCEEECTTSS
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC--CCcCCeEc-----ccccceeeeecccCcccEEECCCCC
Confidence 3588899999999999986 78999999998876433211 11110010 1111 125899999999
Q ss_pred EEEEEeCCC----------------------------------eEEEEECCCCeEE--EE------eecCCCCeEEEEEe
Q 017421 241 ELVAGSSDD----------------------------------CIYVYDLEANKLS--LR------ILAHTSDVNTVCFG 278 (372)
Q Consensus 241 ~l~s~s~dg----------------------------------~i~iwd~~~~~~~--~~------~~~~~~~v~~~~~s 278 (372)
+|++++.|. .|++||+.+++.. .. +.+|...+..++|+
T Consensus 182 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 261 (719)
T 1z68_A 182 FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWV 261 (719)
T ss_dssp EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEES
T ss_pred EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEe
Confidence 999887552 7889999987642 12 23577789999999
Q ss_pred CCCCCEEEEEeCC----CeEEEEe----ccc------c----cCCCCCee-----EEEeccCCCeEEE
Q 017421 279 DESGHLIYSGSDD----NLCKVNS----VLL------L----TRSINPCN-----KYLFNPCNKYLII 323 (372)
Q Consensus 279 p~~~~~l~s~~~d----g~i~vwd----~~~------~----~~~~~~v~-----~~~~s~~g~~l~~ 323 (372)
||++++++.... ..|.+|| +.+ . ..+...+. .+.|+|||+.++.
T Consensus 262 -pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 262 -TDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp -SSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred -CCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 888877775432 2488899 542 2 24555666 8899999997765
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=9.1e-17 Score=154.97 Aligned_cols=194 Identities=12% Similarity=0.025 Sum_probs=137.1
Q ss_pred CCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCeEEEEeeecccCC-cceEEEEECCCCCEEEEEeC---CCeEEEEEC
Q 017421 124 TSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLR-WTVTDTSLSPDQRHLVYASM---SPIVHIVDV 198 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~ 198 (372)
..+|++++|+|||+.||+++. ||++.||++.++.... ...+. ..+..+.|+|| +.+++++. +....+|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~----lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK----LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE----CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe----eecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 457999999999999998877 9999999997664322 22333 47899999999 77777665 454556554
Q ss_pred CC---CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCE--EEEEeCCCeEEEEECCCCeEEEEeecCCCCeE
Q 017421 199 GS---GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE--LVAGSSDDCIYVYDLEANKLSLRILAHTSDVN 273 (372)
Q Consensus 199 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~--l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 273 (372)
.. +....+.. ...+...+|+|+|+. +++++. +.+.+||+.+++.......+ . .
T Consensus 96 ~~~~~g~~~~l~~------------------~~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~~-~--~ 153 (582)
T 3o4h_A 96 NTSRPGEEQRLEA------------------VKPMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARLP-G--F 153 (582)
T ss_dssp ETTSTTCCEECTT------------------SCSBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEES-S--C
T ss_pred eccCCCccccccC------------------CCCceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecCC-C--c
Confidence 33 22211111 012345688888753 344444 44559999998765544433 3 7
Q ss_pred EEEEeCCCCCEEEEEeCC----CeEEEEeccc-----ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeec--eEEEeecc
Q 017421 274 TVCFGDESGHLIYSGSDD----NLCKVNSVLL-----LTRSINPCNKYLFNPCNKYLIIYLILVISIYSP--NILLDNYF 342 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~d----g~i~vwd~~~-----~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~--~i~lw~~~ 342 (372)
+++|+ |||++|++++.+ +.|++||+.+ +..+...+..++|+|||+.|+++. .++ +|++||+.
T Consensus 154 ~~~~s-pDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~------~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 154 GFVSD-IRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLE------TAREARLVTVDPR 226 (582)
T ss_dssp EEEEE-EETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEE------CSSCEEEEEECTT
T ss_pred eEEEC-CCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEcc------CCCeeEEEEEcCC
Confidence 89999 999999988776 7899999763 346777889999999999999543 355 78999998
Q ss_pred cceEEEEEee
Q 017421 343 LLRTFYSFMV 352 (372)
Q Consensus 343 ~~~~~~~~~~ 352 (372)
+++.. .+.+
T Consensus 227 ~~~~~-~~~~ 235 (582)
T 3o4h_A 227 DGSVE-DLEL 235 (582)
T ss_dssp TCCEE-ECCC
T ss_pred CCcEE-EccC
Confidence 88765 4433
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.6e-15 Score=137.22 Aligned_cols=224 Identities=11% Similarity=0.100 Sum_probs=146.1
Q ss_pred ceeEeeeeeCCCC-Cc---cccCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeEEEEee---ecc--------c
Q 017421 104 CCHMLSRYLPVNG-PW---PVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDI---LAK--------S 167 (372)
Q Consensus 104 ~~~~~~~~~~~~~-~~---~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~---~~~--------~ 167 (372)
..+.+|.+.+... .. .+..+...+..+++ ++++|++++ .++.|.+|++.....+.... ... .
T Consensus 75 ~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 152 (361)
T 3scy_A 75 AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQ 152 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTC
T ss_pred CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcccc
Confidence 3566677665421 11 22334566777888 788777765 57899999997543222111 011 1
Q ss_pred CCcceEEEEECCCCCEEEEEeC-CCeEEEEECCCCce------eeec---ceeecccccceeccCCCCccccEEEEEEcC
Q 017421 168 LRWTVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTM------ESLA---NVTEIHDGLDFSAADDGGYSFGIFSLKFST 237 (372)
Q Consensus 168 ~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 237 (372)
+...+.+++|+|+++++++++. ++.|.+|++..... .... ..... .+...+..++|+|
T Consensus 153 ~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~~~~sp 220 (361)
T 3scy_A 153 TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV------------APGSGPRHLIFNS 220 (361)
T ss_dssp SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC------------CTTCCEEEEEECT
T ss_pred CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec------------CCCCCCeEEEEcC
Confidence 1223578999999997766654 78999999875442 1000 00000 1223578899999
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCeE--EEEee---cCCCCeEEEEEeCCCCCEEEEEeCC--CeEEEEecc----ccc--
Q 017421 238 DGRELVAGS-SDDCIYVYDLEANKL--SLRIL---AHTSDVNTVCFGDESGHLIYSGSDD--NLCKVNSVL----LLT-- 303 (372)
Q Consensus 238 ~~~~l~s~s-~dg~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~sp~~~~~l~s~~~d--g~i~vwd~~----~~~-- 303 (372)
||+++++++ .++.|.+||+.+++. +..+. .+...+..++|+ |+|++|+++..+ +.|.+|++. .+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s-pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS-PDGKYLYASNRLKADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC-TTSSEEEEEECSSSCEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC-CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEe
Confidence 999887776 689999999987754 23332 233457899999 999988776654 899999985 111
Q ss_pred ---CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEee--cccceEE
Q 017421 304 ---RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDN--YFLLRTF 347 (372)
Q Consensus 304 ---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~--~~~~~~~ 347 (372)
.....+..++|+|+|++|+++.. .++.+.+|+ ..+++..
T Consensus 300 ~~~~~g~~~~~~~~spdg~~l~~~~~-----~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 300 GYQLTGIHPRNFIITPNGKYLLVACR-----DTNVIQIFERDQATGLLT 343 (361)
T ss_dssp EEEECSSCCCEEEECTTSCEEEEEET-----TTTEEEEEEECTTTCCEE
T ss_pred eEecCCCCCceEEECCCCCEEEEEEC-----CCCCEEEEEEECCCCcEe
Confidence 11446789999999999888742 257788854 4466543
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=1.1e-16 Score=154.46 Aligned_cols=210 Identities=8% Similarity=-0.012 Sum_probs=145.6
Q ss_pred CceeEeeeeeCCCCCccccCCC-CceEEEEECCCCCEEEEEeC---CCcEEEEeCCC--CeEEEEeeecccCCcceEEEE
Q 017421 103 DCCHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFVAGFQ---ASQIRIYDVER--GWKIQKDILAKSLRWTVTDTS 176 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~--~~~~~~~~~~~~~~~~v~~~~ 176 (372)
+....+|.. .......+..|. ..+..++|+|| +.+++++. +....+|.+.. ....... .... .+...+
T Consensus 43 ~g~~~lw~~-~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l--~~~~--~~~~~~ 116 (582)
T 3o4h_A 43 EGSVNAYLY-DGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRL--EAVK--PMRILS 116 (582)
T ss_dssp TTEEEEEEE-ETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEEC--TTSC--SBEEEE
T ss_pred CCceeEEEE-cCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccc--cCCC--Cceeee
Confidence 556778886 444455566665 68999999999 77777664 44455654432 1111121 1111 234567
Q ss_pred ECCCCCE-EEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeE
Q 017421 177 LSPDQRH-LVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCI 251 (372)
Q Consensus 177 ~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i 251 (372)
|+|+++. +++...++.+.+||+.+++...+.. + ...+++|+|||++|++++.+ +.|
T Consensus 117 ~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-----------------~--~~~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 117 GVDTGEAVVFTGATEDRVALYALDGGGLRELAR-----------------L--PGFGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp EEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-----------------E--SSCEEEEEEETTEEEEEEEEETTEEEE
T ss_pred eCCCCCeEEEEecCCCCceEEEccCCcEEEeec-----------------C--CCceEEECCCCCEEEEEEEcCCCCeEE
Confidence 8887764 3333444556699999887544332 1 11688999999999988776 789
Q ss_pred EEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC--eEEEEecccc-----cCCCCCeeEEE--------ecc
Q 017421 252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN--LCKVNSVLLL-----TRSINPCNKYL--------FNP 316 (372)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg--~i~vwd~~~~-----~~~~~~v~~~~--------~s~ 316 (372)
++||+.+++.. .+..|...+..++|+ |||+.|+++..++ .|++||+.+. ..+...+..++ |+|
T Consensus 178 ~~~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 178 FTSNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp EEEETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECT
T ss_pred EEEcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcC
Confidence 99999988764 667788889999999 9999999888888 8999998642 34555666667 999
Q ss_pred CCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 317 CNKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 317 ~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
||.+++++. .|+++++|++ ++..
T Consensus 256 dg~~~~~~~------~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 256 DGRLAVVAR------REGRSAVFID--GERV 278 (582)
T ss_dssp TSCEEEEEE------ETTEEEEEET--TEEE
T ss_pred CCcEEEEEE------cCCcEEEEEE--CCee
Confidence 996666664 5788888888 5544
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=8.3e-16 Score=137.86 Aligned_cols=156 Identities=13% Similarity=0.150 Sum_probs=111.3
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEE-EeCCCeEEEEECCCCceeeec
Q 017421 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLA 207 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~ 207 (372)
+++++++++++++++.++.|.+||+.+++.+..... +....+..++|+|+++.+++ ...++.|.+||+.+++.....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 456888899999999999999999998866554322 21124778999999987654 456899999999988764333
Q ss_pred ceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCe---EEEEeecCCCCe
Q 017421 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------------DCIYVYDLEANK---LSLRILAHTSDV 272 (372)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d------------g~i~iwd~~~~~---~~~~~~~~~~~v 272 (372)
...... ......+..++|+|+|++|++++.+ +.|.+||+.+++ .+..+. +...+
T Consensus 82 ~~~~~~----------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~ 150 (349)
T 1jmx_B 82 NLSSVP----------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQV 150 (349)
T ss_dssp ESCCST----------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSC
T ss_pred Eccccc----------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcc
Confidence 211000 0002246789999999999988865 899999998843 333443 34468
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeccc
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLL 301 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~ 301 (372)
.+++|+ |+|+ +++++. .|.+||+.+
T Consensus 151 ~~~~~s-~dg~-l~~~~~--~i~~~d~~~ 175 (349)
T 1jmx_B 151 YLMRAA-DDGS-LYVAGP--DIYKMDVKT 175 (349)
T ss_dssp CCEEEC-TTSC-EEEESS--SEEEECTTT
T ss_pred cceeEC-CCCc-EEEccC--cEEEEeCCC
Confidence 899999 8998 555543 499999863
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=3e-15 Score=135.75 Aligned_cols=203 Identities=10% Similarity=-0.003 Sum_probs=138.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeEEEEeeecccCCcceEEEEECCCCCE--EEEEe------------
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVE-RGWKIQKDILAKSLRWTVTDTSLSPDQRH--LVYAS------------ 188 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~------------ 188 (372)
...+..++|+|+|++|++++.+ .|.+|++. +++...... .... ..+..++|+|++++ ++++.
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEAS-HPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEE-EECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeE-eecC-CCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 3467889999999999988887 99999997 665432211 1111 12556899999995 44443
Q ss_pred -CCCeEEEEECCC-CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECC-CCeEE--
Q 017421 189 -MSPIVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLE-ANKLS-- 262 (372)
Q Consensus 189 -~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~-~~~~~-- 262 (372)
.++.+.+|++.. ++......... + .+...+.+++|+|||++|+++.. ++.|.+||+. +++..
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~-~-----------~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYE-Y-----------QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV 183 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEE-C-----------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred cCCceEEEEccCCCCcCcceEeeEE-e-----------CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEe
Confidence 689999999974 54322211110 0 12246899999999998887654 6799999998 67643
Q ss_pred EEee--cCCCCeEEEEEeCCCCCEEEEEeC-CCeEEEEeccc--c---------cC-------CCC------CeeEEE-e
Q 017421 263 LRIL--AHTSDVNTVCFGDESGHLIYSGSD-DNLCKVNSVLL--L---------TR-------SIN------PCNKYL-F 314 (372)
Q Consensus 263 ~~~~--~~~~~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~~~--~---------~~-------~~~------~v~~~~-~ 314 (372)
..+. .|...+..++|+ |+|++|++++. ++.|.+|++.. . .. +.. .+..++ |
T Consensus 184 ~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 184 GSVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp EEEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred eeEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 2333 245678999999 99999888775 78999997641 1 01 111 478899 9
Q ss_pred ccCCCeEEEEeeeeEEEee----ceEEEeecc-cceE
Q 017421 315 NPCNKYLIIYLILVISIYS----PNILLDNYF-LLRT 346 (372)
Q Consensus 315 s~~g~~l~~~~~~~~~~~d----~~i~lw~~~-~~~~ 346 (372)
+|||++|+++... .+ ++|.+|++. +++.
T Consensus 263 spdG~~l~v~~~~----~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 263 TFSGKYMFASSRA----NKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp CTTSSEEEEEEEE----SSTTSCCEEEEEEECTTSCE
T ss_pred CCCCCEEEEECCC----CCCCCCCeEEEEEECCCCCE
Confidence 9999998876411 11 178899885 5553
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=5.6e-16 Score=153.68 Aligned_cols=232 Identities=12% Similarity=0.029 Sum_probs=150.1
Q ss_pred CceeEeeeeeCCCCCccccCCCCc-----eEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEeeecccC
Q 017421 103 DCCHMLSRYLPVNGPWPVDQTTSR-----AYVSQFSADGSLFVAGFQA---------SQIRIYDVERGWKIQKDILAKSL 168 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~ 168 (372)
+..+.+|+.........+.+|... ...++|||||++|+.++.+ +.+.+||+.+++... ...+
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~----l~~~ 110 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT----EERI 110 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----SSCC
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE----cccC
Confidence 566777777666555555555432 3457899999999998875 567799999985432 4455
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCc----cccEEEEEEcCCCCEEEE
Q 017421 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGY----SFGIFSLKFSTDGRELVA 244 (372)
Q Consensus 169 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~i~~~~~sp~~~~l~s 244 (372)
...+..++|||||+.|+.+. ++.|++|++.++....+... ......+....+--+ ......+.|||||+.|+.
T Consensus 111 ~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~--g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~ 187 (740)
T 4a5s_A 111 PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT--GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAY 187 (740)
T ss_dssp CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC--CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEE
T ss_pred CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC--CCccceecCcccccccchhcCCCcceEECCCCCEEEE
Confidence 66799999999999999885 68999999998875443321 111101110000000 012235899999999988
Q ss_pred EeCCC------------------------------------eEEEEECCC---Ce--EEEEee------cCCCCeEEEEE
Q 017421 245 GSSDD------------------------------------CIYVYDLEA---NK--LSLRIL------AHTSDVNTVCF 277 (372)
Q Consensus 245 ~s~dg------------------------------------~i~iwd~~~---~~--~~~~~~------~~~~~v~~~~~ 277 (372)
++.|. .|++||+.+ ++ ....+. +|...+..++|
T Consensus 188 ~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w 267 (740)
T 4a5s_A 188 AQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW 267 (740)
T ss_dssp EEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred EEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence 75321 588899998 73 223333 27778999999
Q ss_pred eCCCCCEEEEEeC----CCeEEEEeccccc--------------CCCCCee-----EEEeccCCCeEE-EEeeeeEEEee
Q 017421 278 GDESGHLIYSGSD----DNLCKVNSVLLLT--------------RSINPCN-----KYLFNPCNKYLI-IYLILVISIYS 333 (372)
Q Consensus 278 sp~~~~~l~s~~~----dg~i~vwd~~~~~--------------~~~~~v~-----~~~~s~~g~~l~-~~~~~~~~~~d 333 (372)
+ |||++++.... +..|.+||+.+.. .+...|. .+.|+|||+.++ ..++.. -.
T Consensus 268 s-pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~---G~ 343 (740)
T 4a5s_A 268 A-TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE---GY 343 (740)
T ss_dssp E-ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT---SC
T ss_pred e-CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC---Cc
Confidence 9 89987665532 3479999976432 2444444 789999999877 443210 01
Q ss_pred ceEEEeecccce
Q 017421 334 PNILLDNYFLLR 345 (372)
Q Consensus 334 ~~i~lw~~~~~~ 345 (372)
..|.+|+..+++
T Consensus 344 ~~l~~~~~~~~~ 355 (740)
T 4a5s_A 344 RHICYFQIDKKD 355 (740)
T ss_dssp EEEEEEETTCSS
T ss_pred eEEEEEECCCCc
Confidence 345666655443
No 162
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.71 E-value=2.7e-15 Score=133.68 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=110.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc-ceEEEEECCCCCEEEE-EeCCCeEEEEECCCCceeeecceeeccc
Q 017421 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-TVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLANVTEIHD 214 (372)
Q Consensus 137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (372)
++|++++.++.|.+||+.+++.+..... ++.. .+..++|+|+++.+++ +..++.|.+||+.+++..........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI--ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC--TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc--CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc--
Confidence 4788999999999999998866554322 2211 3778999999987654 55578999999998876443322110
Q ss_pred ccceeccCCCCccccEEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCC
Q 017421 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 282 (372)
Q Consensus 215 ~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 282 (372)
+ .+...+..++|+|+|++++++. .++.|.+||+.+++.+..+.. ...+.+++|+ |++
T Consensus 78 ~---------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-~dg 146 (337)
T 1pby_B 78 E---------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDG 146 (337)
T ss_dssp T---------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTS
T ss_pred c---------cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC-CCC
Confidence 0 0122466799999999988876 579999999999988777764 4567889999 999
Q ss_pred CEEEEEeCCCeEEEEecc
Q 017421 283 HLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 283 ~~l~s~~~dg~i~vwd~~ 300 (372)
++|+++ ++.|.+||+.
T Consensus 147 ~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 147 SKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp SCEEEE--SSSEEEEETT
T ss_pred CEEEEe--CCeEEEEECC
Confidence 988877 6889999986
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=4.2e-16 Score=154.57 Aligned_cols=194 Identities=12% Similarity=0.084 Sum_probs=139.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCc-----ceEEEEECCCCCEEEEEeCC---------C
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-----TVTDTSLSPDQRHLVYASMS---------P 191 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d---------g 191 (372)
....+.|+|||++++++ |+.|++||+.++..... ...+.. ....+.|||||++|++++.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF---LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEE---ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEE---EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 45578999999988886 89999999998865432 223321 22458899999999998875 6
Q ss_pred eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecCCC
Q 017421 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTS 270 (372)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~ 270 (372)
.+.+||+.+++...+. .|...+..++|||||+.||.+. ++.|++||+.+++..+.. .++..
T Consensus 93 ~~~~~d~~~~~~~~l~-----------------~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~ 154 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEE-----------------RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKED 154 (740)
T ss_dssp EEEEEETTTTEECCSS-----------------CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTT
T ss_pred EEEEEECCCCcEEEcc-----------------cCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcc
Confidence 6789999998764432 2344789999999999999885 689999999888754321 22322
Q ss_pred Ce-----------------EEEEEeCCCCCEEEEEeCCC------------------------------------eEEEE
Q 017421 271 DV-----------------NTVCFGDESGHLIYSGSDDN------------------------------------LCKVN 297 (372)
Q Consensus 271 ~v-----------------~~~~~sp~~~~~l~s~~~dg------------------------------------~i~vw 297 (372)
.+ ..+.|| |||+.|+.++.|. .|++|
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wS-pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWS-PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEEC-TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred ceecCcccccccchhcCCCcceEEC-CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 22 348999 9999999875321 47888
Q ss_pred eccc---c---c-----------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 298 SVLL---L---T-----------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 298 d~~~---~---~-----------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
|+.+ . . .+...+..++|+|||+.++...... ..+..|.+||+.+++
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~--~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI--QNYSVMDICDYDESS 296 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS--TTEEEEEEEEEETTT
T ss_pred ECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC--CCEEEEEEEECCCCc
Confidence 8876 4 1 1555688999999999766543110 013468899988876
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=8.3e-16 Score=139.49 Aligned_cols=201 Identities=11% Similarity=0.041 Sum_probs=136.7
Q ss_pred ceEEEEECCCCCE--EEEEe-------------CCCcEEEEeCCC-CeEEEEeeec-ccCCcceEEEEECCCCCEEEEEe
Q 017421 126 RAYVSQFSADGSL--FVAGF-------------QASQIRIYDVER-GWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYAS 188 (372)
Q Consensus 126 ~v~~~~~s~~~~~--l~~~~-------------~dg~i~vwd~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 188 (372)
.+.+++|+|+|++ ++++. .++.+.+|++.. +......... ..+...+.+++|+|||++++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3556899999995 44543 689999999974 4433222111 12334689999999999888776
Q ss_pred C-CCeEEEEECC-CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECC--CCeEE-
Q 017421 189 M-SPIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLE--ANKLS- 262 (372)
Q Consensus 189 ~-dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~--~~~~~- 262 (372)
. ++.|.+|++. +++.......... .|...+..++|+|||+++++++. ++.|.+|++. +++..
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 231 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAP------------DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY 231 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECS------------STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecC------------CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE
Confidence 4 6799999998 6664322211100 01236889999999999887765 6899999875 45532
Q ss_pred --EEeec-------CCC------CeEEEE-EeCCCCCEEEEEeCC-C-----eEEEEeccc---cc-------CCCCCee
Q 017421 263 --LRILA-------HTS------DVNTVC-FGDESGHLIYSGSDD-N-----LCKVNSVLL---LT-------RSINPCN 310 (372)
Q Consensus 263 --~~~~~-------~~~------~v~~~~-~sp~~~~~l~s~~~d-g-----~i~vwd~~~---~~-------~~~~~v~ 310 (372)
..+.. |.. .+..++ |+ |+|++|++++.+ + .|.+|++.. +. .+...+.
T Consensus 232 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s-pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 232 THHSFPLIPPGIPDRDPETGKGLYRADVCALT-FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp EEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC-TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred ccceEEcCCCCcCCcccccccccccccEEEEC-CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence 22221 122 478999 99 999988876643 2 899999851 11 1334567
Q ss_pred EEEecc---CCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 311 KYLFNP---CNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 311 ~~~~s~---~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
.++|+| +|++|+++.. .+++|.+|++...
T Consensus 311 ~~a~sp~~~dg~~l~v~~~-----~~~~v~v~~~~~~ 342 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDD-----QEGWLEIYRWKDE 342 (365)
T ss_dssp CCCEEECTTCTTEEEEECS-----SSCEEEEEEEETT
T ss_pred cceecCCCcCCCEEEEEEc-----CCCeEEEEEEchh
Confidence 889999 8999988842 1478899988765
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=2.4e-15 Score=137.23 Aligned_cols=208 Identities=14% Similarity=0.045 Sum_probs=143.8
Q ss_pred CccccCCCCceEE-----EEECCCCCEEEEEeC-CC--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe
Q 017421 117 PWPVDQTTSRAYV-----SQFSADGSLFVAGFQ-AS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS 188 (372)
Q Consensus 117 ~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 188 (372)
...+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.... ...+...+..+.|+||++.|++++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l---t~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL---TEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC---CCSSCBCSSSCEECTTSSEEEEEE
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe---eeCCCCCccceEEcCCCCEEEEEe
Confidence 3445555555555 789999999998887 66 488889988754432 334444455678999999999999
Q ss_pred CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEE--EEEcCCCCEEEEEe--------------------
Q 017421 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFS--LKFSTDGRELVAGS-------------------- 246 (372)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~--~~~sp~~~~l~s~s-------------------- 246 (372)
.++.|++||+.+++...+.... ...+.. ..++|++++++...
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~----------------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVP----------------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECC----------------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred CCCeEEEEECCCCcceeeeech----------------hhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 9999999999998765443321 112322 33489999887432
Q ss_pred --CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC-CCCEEEEEeCC------CeEEEEeccc-----ccCCC--CCee
Q 017421 247 --SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE-SGHLIYSGSDD------NLCKVNSVLL-----LTRSI--NPCN 310 (372)
Q Consensus 247 --~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~-~~~~l~s~~~d------g~i~vwd~~~-----~~~~~--~~v~ 310 (372)
.+..|.+||+.+++.. .+..+...+..++|+ | +|+.|+.+..+ ..|.++|+.. +..+. ..+.
T Consensus 164 ~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGEST-VILQENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCT 241 (388)
T ss_dssp GCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEE
T ss_pred cCCcceEEEEECCCCceE-EeecCCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccc
Confidence 3467999999988654 444566788999999 8 99988877653 3677787652 22232 3577
Q ss_pred EEEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
.+.|+|||+.|+..+...- ..+..|.+||+.+++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCE
T ss_pred cceECCCCCEEEEEecCCC-CCcceEEEEecCCCce
Confidence 8999999998876532100 0012489999988873
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=3.9e-15 Score=145.67 Aligned_cols=211 Identities=9% Similarity=-0.011 Sum_probs=142.1
Q ss_pred ceeEeeeeeCCCCCccccCCCCceE---------EEEEC--CCCCE-EEEEeC-CCcEEEEeCC--C-CeEEEEeeecc-
Q 017421 104 CCHMLSRYLPVNGPWPVDQTTSRAY---------VSQFS--ADGSL-FVAGFQ-ASQIRIYDVE--R-GWKIQKDILAK- 166 (372)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~~~~~-dg~i~vwd~~--~-~~~~~~~~~~~- 166 (372)
....+|..........+..+...+. ...|+ |||+. |+.++. +..|.++++. . +. ...+....
T Consensus 47 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~ 125 (662)
T 3azo_A 47 GRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSA 125 (662)
T ss_dssp TEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCC
T ss_pred CcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCcc
Confidence 3456666655555566666766666 56565 99998 776654 5677777776 2 32 22211110
Q ss_pred -cCCcceEEEEECCCCCEEEEEeCC----------CeEEEEECCC------CceeeecceeecccccceeccCCCCcccc
Q 017421 167 -SLRWTVTDTSLSPDQRHLVYASMS----------PIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGGYSFG 229 (372)
Q Consensus 167 -~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 229 (372)
.+...+..++|+|||+.|++++.+ ..|++||+.+ +....+.. . +...
T Consensus 126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~--------------~~~~ 189 (662)
T 3azo_A 126 VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD--D--------------AHRF 189 (662)
T ss_dssp STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC--S--------------CSSE
T ss_pred CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe--c--------------CCCc
Confidence 055678899999999999998876 5899999987 54432220 0 1235
Q ss_pred EEEEEEcCCCCEEEEEeCC--------CeEEEEECC-CC---eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC--eEE
Q 017421 230 IFSLKFSTDGRELVAGSSD--------DCIYVYDLE-AN---KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN--LCK 295 (372)
Q Consensus 230 i~~~~~sp~~~~l~s~s~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg--~i~ 295 (372)
+..++|+|||++|+.++.+ ..|++||+. ++ +.......|...+..+.|+ |||+++++++.++ .|.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s-pdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA-PDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC-TTSCEEEEECTTSSCEEE
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC-CCCeEEEEECCCCCeEEE
Confidence 7778999999999877754 379999999 57 4444444567889999999 9999888888888 566
Q ss_pred EEecccc-----cCCCCC---------eeEEEeccCCCeEEEEeeeeEEEeeceEEEe
Q 017421 296 VNSVLLL-----TRSINP---------CNKYLFNPCNKYLIIYLILVISIYSPNILLD 339 (372)
Q Consensus 296 vwd~~~~-----~~~~~~---------v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw 339 (372)
+||+... ..+... +..++|+|++++++++. . +.++||
T Consensus 269 ~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~------~-~~~~l~ 319 (662)
T 3azo_A 269 RVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG------K-GAAVLG 319 (662)
T ss_dssp EECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB------S-SSCEEE
T ss_pred EEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE------c-CccEEE
Confidence 6665321 111111 46789999999888775 2 555666
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=1.5e-14 Score=141.48 Aligned_cols=188 Identities=11% Similarity=0.048 Sum_probs=129.0
Q ss_pred CCCccccC-----CCCceEEEEECCCCCEEEEEeCC----------CcEEEEeCCC------CeEEEEeeecc-cCCcce
Q 017421 115 NGPWPVDQ-----TTSRAYVSQFSADGSLFVAGFQA----------SQIRIYDVER------GWKIQKDILAK-SLRWTV 172 (372)
Q Consensus 115 ~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------g~i~vwd~~~------~~~~~~~~~~~-~~~~~v 172 (372)
.....+.. |...+..++|+|||+.|++++.+ ..|++|++.+ +.. .. .. .+...+
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---l~~~~~~~~ 190 (662)
T 3azo_A 115 AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RE---LSDDAHRFV 190 (662)
T ss_dssp CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EE---SSCSCSSEE
T ss_pred CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eE---EEecCCCcc
Confidence 44555655 67789999999999999988876 5899999987 432 22 22 334468
Q ss_pred EEEEECCCCCEEEEEeCC--------CeEEEEECC-CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE
Q 017421 173 TDTSLSPDQRHLVYASMS--------PIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV 243 (372)
Q Consensus 173 ~~~~~~~~~~~l~~~~~d--------g~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~ 243 (372)
..++|+|||++|+.++.+ ..|++||+. ++.......+.. +|...+..+.|+|||++++
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-------------~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-------------GPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-------------ETTBCEEEEEECTTSCEEE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-------------CCCceEcceEECCCCeEEE
Confidence 889999999999987754 379999998 562211112111 1234789999999999777
Q ss_pred EEeCCC--eEEEEECCCCeEEEEeecCCCC--------eEEEEEeCCCCCEEEEEeCCCeEEEE--ecc-----cccCCC
Q 017421 244 AGSSDD--CIYVYDLEANKLSLRILAHTSD--------VNTVCFGDESGHLIYSGSDDNLCKVN--SVL-----LLTRSI 306 (372)
Q Consensus 244 s~s~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~sp~~~~~l~s~~~dg~i~vw--d~~-----~~~~~~ 306 (372)
++..++ .|.+||+.+++.......+... +..++|+ ++++++++++. +.++|| |+. .+..+.
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~ 335 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL-ANGLIAVVHGK-GAAVLGILDPESGELVDAAGPW 335 (662)
T ss_dssp EECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC-TTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSC
T ss_pred EECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEe-CCCEEEEEEEc-CccEEEEEECCCCcEEEecCCC
Confidence 887777 6777777677654333322221 4678898 88999999988 999999 443 233445
Q ss_pred CCeeEEEeccCCCeEE
Q 017421 307 NPCNKYLFNPCNKYLI 322 (372)
Q Consensus 307 ~~v~~~~~s~~g~~l~ 322 (372)
..+..+ |++++..++
T Consensus 336 ~~~~~~-~s~~~~~~~ 350 (662)
T 3azo_A 336 TEWAAT-LTVSGTRAV 350 (662)
T ss_dssp CEEEEE-EEEETTEEE
T ss_pred CeEEEE-EecCCCEEE
Confidence 556655 155555444
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=3.5e-13 Score=117.62 Aligned_cols=206 Identities=13% Similarity=0.038 Sum_probs=143.7
Q ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeec---ccCCcceEEEEE-CCCCCEEEEEeC-CCeEEE
Q 017421 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA---KSLRWTVTDTSL-SPDQRHLVYASM-SPIVHI 195 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~v~~~~~-~~~~~~l~~~~~-dg~i~v 195 (372)
.++-..+.+++++++++++++...++.|.+||.. +..+...... ..+...+..+++ .++++++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3456679999999999988888888999999987 4343332111 123346889999 567766666543 789999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee--cCCCCeE
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVN 273 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~ 273 (372)
||. +++....... .+...+..++++|+|+++++...++.|.+||.. ++.+..+. .+...+.
T Consensus 105 ~d~-~g~~~~~~~~---------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 105 YNQ-YGQFVRKFGA---------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp ECT-TSCEEEEECT---------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEE
T ss_pred ECC-CCcEEEEecC---------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcE
Confidence 994 4543222110 122368899999999988888788999999965 55555554 3445789
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEeccc-----cc--CCCCCeeEEEeccCCCeEEEEeeeeEEEeec-eEEEeecccce
Q 017421 274 TVCFGDESGHLIYSGSDDNLCKVNSVLL-----LT--RSINPCNKYLFNPCNKYLIIYLILVISIYSP-NILLDNYFLLR 345 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----~~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~-~i~lw~~~~~~ 345 (372)
.++++ ++|+++++...++.|++||... +. ++...+..++++|+|+++++.. .++ .|.+|+. +++
T Consensus 168 ~i~~~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~------~~~~~i~~~~~-~g~ 239 (286)
T 1q7f_A 168 GVVVN-DKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADN------HNNFNLTIFTQ-DGQ 239 (286)
T ss_dssp EEEEC-SSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC------SSSCEEEEECT-TSC
T ss_pred EEEEC-CCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeC------CCCEEEEEECC-CCC
Confidence 99999 8898888877899999999752 11 2235689999999998777664 233 6777763 455
Q ss_pred EEEEEee
Q 017421 346 TFYSFMV 352 (372)
Q Consensus 346 ~~~~~~~ 352 (372)
.+..+..
T Consensus 240 ~~~~~~~ 246 (286)
T 1q7f_A 240 LISALES 246 (286)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 5554433
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=1.7e-13 Score=119.54 Aligned_cols=196 Identities=13% Similarity=0.098 Sum_probs=140.2
Q ss_pred CCCceEEEEE-CCCCCEEEEEeC-CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421 123 TTSRAYVSQF-SADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (372)
Q Consensus 123 ~~~~v~~~~~-s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 200 (372)
+...+.++++ .++++++++... ++.|.+|+. ++..+... ...+...+.+++++|+++++++...++.|.+||...
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 151 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKF--GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG 151 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEE--CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEe--cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC
Confidence 4467899999 577877776643 789999994 45444332 122334588999999999888777789999999753
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC--CCCeEEEEEe
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH--TSDVNTVCFG 278 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s 278 (372)
+...... .. ++...+..++++|+|+++++...++.|.+||.. ++.+..+..+ ...+..++++
T Consensus 152 -~~~~~~~--~~------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 152 -NVLHKFG--CS------------KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp -CEEEEEE--CT------------TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEEC
T ss_pred -CEEEEeC--CC------------CccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEEC
Confidence 3221111 00 122368899999999988888888999999985 5555566433 3578999999
Q ss_pred CCCCCEEEEEeCCC-eEEEEeccc-----ccC--CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 279 DESGHLIYSGSDDN-LCKVNSVLL-----LTR--SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 279 p~~~~~l~s~~~dg-~i~vwd~~~-----~~~--~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
++|+++++...++ .|.+||... +.. ....+.+++++|+|+++++. .|++|++|++....
T Consensus 216 -~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-------~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 216 -SNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS-------KDYRLYIYRYVQLA 282 (286)
T ss_dssp -TTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-------TTTEEEEEECSCCC
T ss_pred -CCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC-------CCCeEEEEEccccc
Confidence 8999888887776 999999651 112 22346799999999877664 57889999876543
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=2.3e-13 Score=121.49 Aligned_cols=215 Identities=11% Similarity=0.020 Sum_probs=150.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCC------------------------CcEEEEeCCCCeEEEEeeecccCCcceEEEEEC
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQA------------------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~d------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 178 (372)
.-+.+.+++++|+|+++++...+ +.|.+||..+++..... ...+-..+..++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~~~~~p~gia~d 99 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS--GKNLFYLPHGLSID 99 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE--CTTTCSSEEEEEEC
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc--CCCccCCceEEEEC
Confidence 35679999999999999888776 47999999888654431 22333468899999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEe-CCCeEEEEEC
Q 017421 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGS-SDDCIYVYDL 256 (372)
Q Consensus 179 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s-~dg~i~iwd~ 256 (372)
|+++++++...++.|++||...... ....+... ..+....++......++++| +++++++.+ .++.|++||
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~-----~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEG-PLLILGRS-----MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSC-CSEEESBT-----TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeE-EEEEeccc-----CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 9999888888899999999865421 11111000 00000113445789999999 788888886 689999999
Q ss_pred CCCeEEEEeecCC----------CCeEEEEEeCCC-CCEEEEEeCCCeEEEEecccc--------cCCCCCeeEEEeccC
Q 017421 257 EANKLSLRILAHT----------SDVNTVCFGDES-GHLIYSGSDDNLCKVNSVLLL--------TRSINPCNKYLFNPC 317 (372)
Q Consensus 257 ~~~~~~~~~~~~~----------~~v~~~~~sp~~-~~~l~s~~~dg~i~vwd~~~~--------~~~~~~v~~~~~s~~ 317 (372)
.+++.+..+.... ..+..++++ ++ +.++++...++.|++||..+. ..+...+..++|+|
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d-~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p- 250 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALV-PHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP- 250 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEE-TTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEE-CCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-
Confidence 5576666664222 348899999 76 777788788999999998632 23456788999999
Q ss_pred CCeEEEEeeeeEE---EeeceEEEeecccceEEEEE
Q 017421 318 NKYLIIYLILVIS---IYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 318 g~~l~~~~~~~~~---~~d~~i~lw~~~~~~~~~~~ 350 (372)
+..+.+.. .+. ..+..+++|++.+++.+..+
T Consensus 251 g~~~~~~g--~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 251 GFLFAVNG--KPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TEEEEEEC--CCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CEEEEeCC--CEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 44333321 111 12458999999999888776
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=3.1e-13 Score=133.39 Aligned_cols=206 Identities=13% Similarity=0.098 Sum_probs=140.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe-----
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQAS-----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI----- 192 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----- 192 (372)
|...+..++|||||++||.+..++ .|++||+.+++....... . ..+..++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~--~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--R--VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--E--ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--C--cccceEEEEeCCCEEEEEEECCcccccc
Confidence 445688999999999998775543 899999999866543221 1 12677999999999999988765
Q ss_pred -----------EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-----CCeEEEEEC
Q 017421 193 -----------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-----DDCIYVYDL 256 (372)
Q Consensus 193 -----------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-----dg~i~iwd~ 256 (372)
|++|++.++.......... ..|...+..+.|+|||++|+.++. +..|++||+
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~------------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~ 266 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEF------------PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL 266 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECC------------TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred ccccccCCCCEEEEEECCCCcccceEEecc------------CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEEC
Confidence 9999998876321111010 013345788999999999987764 568999999
Q ss_pred CC------Ce-EEEEeecCCCCeEEEEEeCCCCCEEEEEeCC----CeEEEEecccc--------cCCCC--CeeEEEec
Q 017421 257 EA------NK-LSLRILAHTSDVNTVCFGDESGHLIYSGSDD----NLCKVNSVLLL--------TRSIN--PCNKYLFN 315 (372)
Q Consensus 257 ~~------~~-~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d----g~i~vwd~~~~--------~~~~~--~v~~~~~s 315 (372)
.+ +. ....+..+...+.. .|+ ++|..|+..+.+ +.|.+||+... ..+.. .+..+.|+
T Consensus 267 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 267 QQESNGITGILKWVKLIDNFEGEYD-YVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp GGSSSSSCSSCCCEEEECSSSSCEE-EEE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred cccccccCCccceEEeeCCCCcEEE-EEe-ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 86 43 35566666666655 477 778777666543 36999998642 13333 57789998
Q ss_pred cCCCeEEEEeeeeEEEeec--eEEEeecccceEEEEEee
Q 017421 316 PCNKYLIIYLILVISIYSP--NILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 316 ~~g~~l~~~~~~~~~~~d~--~i~lw~~~~~~~~~~~~~ 352 (372)
+++.+++++. .|+ .|.+|+..+++.+..+..
T Consensus 345 ~~~~lv~~~~------~~g~~~l~~~~~~~g~~~~~l~~ 377 (710)
T 2xdw_A 345 RSNFLVLCYL------HDVKNTLQLHDLATGALLKIFPL 377 (710)
T ss_dssp TTTEEEEEEE------ETTEEEEEEEETTTCCEEEEECC
T ss_pred cCCEEEEEEE------ECCEEEEEEEECCCCCEEEecCC
Confidence 7777666664 233 355666656765555543
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.59 E-value=2.2e-13 Score=123.29 Aligned_cols=234 Identities=11% Similarity=-0.016 Sum_probs=140.3
Q ss_pred ceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeeccc---CCc
Q 017421 104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKS---LRW 170 (372)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~---~~~ 170 (372)
..+.+++....+....+..+..+ .++|+|||++++++. .++.|.+||+.+.+.+........ +..
T Consensus 31 ~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp CEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred CeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 34444443222222233333333 899999999998876 256799999998766655433211 123
Q ss_pred ceEEEEECCCCCEEEEEeC--CCeEEEEECCCCceeee-cceeecccccceeccCCC-----CccccEEEEEE-------
Q 017421 171 TVTDTSLSPDQRHLVYASM--SPIVHIVDVGSGTMESL-ANVTEIHDGLDFSAADDG-----GYSFGIFSLKF------- 235 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~------- 235 (372)
.+..++++|||++|+++.. ++.|.+||+.+++.... ...... .+..+.+.... ...+.+..+.+
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 4678999999999998874 57899999999876543 222110 00001110000 00001111111
Q ss_pred --------------------cCCCCEEEEEeCCCeEEEEECCCCe--EEEEeec------CC----CCeEEEEEeCCCCC
Q 017421 236 --------------------STDGRELVAGSSDDCIYVYDLEANK--LSLRILA------HT----SDVNTVCFGDESGH 283 (372)
Q Consensus 236 --------------------sp~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~------~~----~~v~~~~~sp~~~~ 283 (372)
+|++..++..+.++.|.++|+..+. ....+.. +. .....++|+ ++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~-~dg~ 266 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH-RASG 266 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE-TTTT
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe-cCCC
Confidence 1233344455566778888876443 1122110 00 111237899 8877
Q ss_pred EEEEEeC-----------CCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc--
Q 017421 284 LIYSGSD-----------DNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL-- 344 (372)
Q Consensus 284 ~l~s~~~-----------dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~-- 344 (372)
.++++.. .+.|.+||+.+.+ .+. +.+++|+|||++|+++. + ++|.+||..++
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n------~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLD------G-GNVNVYDISQPEP 337 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEEC------S-SCEEEEECSSSSC
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeC------C-CeEEEEECCCCcc
Confidence 7766543 3489999987543 333 89999999999998875 3 89999999999
Q ss_pred eEEEEE
Q 017421 345 RTFYSF 350 (372)
Q Consensus 345 ~~~~~~ 350 (372)
+.+..+
T Consensus 338 ~~~~~i 343 (361)
T 2oiz_A 338 KLLRTI 343 (361)
T ss_dssp EEEEEE
T ss_pred eeeEEe
Confidence 888776
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=4.2e-13 Score=117.78 Aligned_cols=195 Identities=10% Similarity=0.032 Sum_probs=135.9
Q ss_pred ccccCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421 118 WPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (372)
Q Consensus 118 ~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 196 (372)
..+..+.....+++|+|+++ +++++..++.|..|+..++ ... ...+...+.+++++|+++++++...++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~---~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP---EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE---EESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE---EECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 34445566788999999998 7778888899999999877 222 12334468999999999988777777899999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE----e-------------CCCeEEEEECCCC
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG----S-------------SDDCIYVYDLEAN 259 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~----s-------------~dg~i~iwd~~~~ 259 (372)
|..+++.......... .....++.++++|+|+++++. + ..+.|..++.. +
T Consensus 96 d~~~g~~~~~~~~~~~------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 96 REPGGEWESIADSFEG------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp CSTTCCEEEEECEETT------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred cCCCCcEEEEeeccCC------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 9988875433221110 011256789999999988873 2 13466666665 4
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-c--c-------cCCCCCeeEEEeccCCCeEEEEeeeeE
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-L--L-------TRSINPCNKYLFNPCNKYLIIYLILVI 329 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-~--~-------~~~~~~v~~~~~s~~g~~l~~~~~~~~ 329 (372)
+. ..+..+...+..++|+ |+++.+++.+.++.|.+|++. . + ......+.+++++++|++.++. .+.+
T Consensus 163 ~~-~~~~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v 239 (296)
T 3e5z_A 163 TL-SAPIRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGV 239 (296)
T ss_dssp CE-EEEECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEE
T ss_pred CE-EEeecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeE
Confidence 43 4445566778999999 999988777778999999985 1 1 1123445789999999866655 4334
Q ss_pred EEee
Q 017421 330 SIYS 333 (372)
Q Consensus 330 ~~~d 333 (372)
.+||
T Consensus 240 ~~~~ 243 (296)
T 3e5z_A 240 HVLT 243 (296)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 4433
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=5e-14 Score=128.37 Aligned_cols=205 Identities=9% Similarity=-0.055 Sum_probs=133.1
Q ss_pred ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEE--EEECCCCCEEEEEe---------
Q 017421 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD--TSLSPDQRHLVYAS--------- 188 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~--------- 188 (372)
..++...+..+.|+|||+.|+.++.++.|++||+.+++...... .+...+.. ..++|++++++...
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccc
Confidence 34455555567899999999999999999999999886543221 22223333 34589999887432
Q ss_pred -------------CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCC------
Q 017421 189 -------------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSD------ 248 (372)
Q Consensus 189 -------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~d------ 248 (372)
.+..|.+||+.+++...+.. +...+..+.|+| ||+.|+....+
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-----------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-----------------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVD 215 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-----------------ESSCEEEEEEETTEEEEEEEEECSCTTTSS
T ss_pred cccchhhhhhccCCcceEEEEECCCCceEEeec-----------------CCccccccEECCCCCCEEEEEEecCCCCCc
Confidence 34689999999887544332 223688999999 99988877653
Q ss_pred CeEEEEECCCCeEEEEeecCC--CCeEEEEEeCCCCCEEEEEeC-CC----eEEEEeccccc-----CCCC------Cee
Q 017421 249 DCIYVYDLEANKLSLRILAHT--SDVNTVCFGDESGHLIYSGSD-DN----LCKVNSVLLLT-----RSIN------PCN 310 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~--~~v~~~~~sp~~~~~l~s~~~-dg----~i~vwd~~~~~-----~~~~------~v~ 310 (372)
..|.++|+..++. ..+..+. ..+..++|+ |+|+.|+..+. ++ .|.+||+.+.+ .... ...
T Consensus 216 ~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 293 (388)
T 3pe7_A 216 ARMWLINEDGTNM-RKVKTHAEGESCTHEFWV-PDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYD 293 (388)
T ss_dssp CSEEEEETTSCCC-EESCCCCTTEEEEEEEEC-TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTT
T ss_pred ceEEEEeCCCCce-EEeeeCCCCcccccceEC-CCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCC
Confidence 3688888876544 3444444 257789999 99987765443 22 39999987432 1111 022
Q ss_pred EEEeccCCCeEEEEeeee---EEEeeceEEEeecccceE
Q 017421 311 KYLFNPCNKYLIIYLILV---ISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~---~~~~d~~i~lw~~~~~~~ 346 (372)
.+.|+|||+.|+...... ..--+..|.+||..+++.
T Consensus 294 ~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 294 GSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp SSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred CCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 347999999888642110 001256899999988765
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=7.6e-13 Score=116.14 Aligned_cols=187 Identities=13% Similarity=0.092 Sum_probs=129.5
Q ss_pred CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeccc-CCcceEEEEECCCCCEEEEE----e---
Q 017421 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVYA----S--- 188 (372)
Q Consensus 117 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~----~--- 188 (372)
...+..+...+.+++++|+|+++++...++.|.+||..++........... ....+..++++|+|+++++. +
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 444556778899999999999888777778999999977754322111111 11246789999999988873 2
Q ss_pred ----------CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC-
Q 017421 189 ----------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE- 257 (372)
Q Consensus 189 ----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~- 257 (372)
..+.|..++.. +...... .+......++|+|+++.+++.+.++.|.+||+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-----------------~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~ 202 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GTLSAPI-----------------RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA 202 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SCEEEEE-----------------CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS
T ss_pred cccccccccCCCcEEEEECCC-CCEEEee-----------------cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC
Confidence 13456666655 4332211 122367889999999988777778999999997
Q ss_pred CCeE---EEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cccCCCCCeeEEEe-ccCCCeEEEEe
Q 017421 258 ANKL---SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LLTRSINPCNKYLF-NPCNKYLIIYL 325 (372)
Q Consensus 258 ~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~~~~~-s~~g~~l~~~~ 325 (372)
+++. ...+..+...+..++++ ++|+++++. ++.|.+||.. .+..+.. +++++| .|+++.|++++
T Consensus 203 ~g~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 203 RGETEYQGVHFTVEPGKTDGLRVD-AGGLIWASA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp SSCEEEEEEEECCSSSCCCSEEEB-TTSCEEEEE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred CCcCcCCCeEeeCCCCCCCeEEEC-CCCCEEEEc--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 4543 23333345567789999 899877666 8889999975 1223444 899999 58998888775
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=4e-13 Score=119.96 Aligned_cols=207 Identities=12% Similarity=0.020 Sum_probs=142.1
Q ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-EEEEeeec------ccCCcceEEEEECC-CCCEEEEEe-CCCe
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILA------KSLRWTVTDTSLSP-DQRHLVYAS-MSPI 192 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~ 192 (372)
++-..+.+++++|+|+++++...++.|++|+..... .+...... ..+-..+..++++| ++.++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 344678999999999988888888999999986542 22221100 22333588999999 788878776 6899
Q ss_pred EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEee--cCC
Q 017421 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRIL--AHT 269 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~ 269 (372)
|++|+. .+........... + .....++......++++|+ ++++++...++.|++||..+++.+..+. .+.
T Consensus 168 I~~~~~-~g~~~~~~~~~g~--~----~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~ 240 (329)
T 3fvz_A 168 IVQFSP-SGKFVTQWGEESS--G----SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG 240 (329)
T ss_dssp EEEECT-TSCEEEEECEECC--S----SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT
T ss_pred EEEEcC-CCCEEEEeccCCC--C----CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC
Confidence 999994 4444322211100 0 0000123346889999998 7777787888999999999888888774 456
Q ss_pred CCeEEEEEeCCCCCEEEEE-------eCCCeEEEEecccc---------cCCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 270 SDVNTVCFGDESGHLIYSG-------SDDNLCKVNSVLLL---------TRSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~-------~~dg~i~vwd~~~~---------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
..+.+++|+ | +..+++. ..+..|++||+.+. ..+...+..++++|+|.++++.. .+
T Consensus 241 ~~~~~~~~~-p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~------~~ 312 (329)
T 3fvz_A 241 RNVFAISYI-P-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA------HT 312 (329)
T ss_dssp TCEEEEEEE-T-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES------SS
T ss_pred CCcceeeec-C-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC------CC
Confidence 688999999 6 4444333 23458999997632 24556689999999996555553 46
Q ss_pred ceEEEeeccc
Q 017421 334 PNILLDNYFL 343 (372)
Q Consensus 334 ~~i~lw~~~~ 343 (372)
+.|++|+...
T Consensus 313 ~~I~~~~~~~ 322 (329)
T 3fvz_A 313 NTVWKFTLTE 322 (329)
T ss_dssp CCEEEEEEEE
T ss_pred CEEEEEeCCc
Confidence 7888888754
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=2.9e-14 Score=130.09 Aligned_cols=213 Identities=12% Similarity=0.033 Sum_probs=133.0
Q ss_pred eEEEEECCCCCEEEEEeCC---CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 127 AYVSQFSADGSLFVAGFQA---SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
+..++|+|||++|+..... ..|.+|++.+++.... ..........+.|+||++.|+.++.++.|++||+.+++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l---~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQL---TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEEC---CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEe---ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6678899999998876543 3788899988754321 222222233478999999999999999999999998875
Q ss_pred eeecceeecc--cc--cceeccCCCCccccEEEEEEcCCCCEEEEE-----eCCCeEEEEECCCCeEEEEeecCCCCeEE
Q 017421 204 ESLANVTEIH--DG--LDFSAADDGGYSFGIFSLKFSTDGRELVAG-----SSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (372)
Q Consensus 204 ~~~~~~~~~~--~~--~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 274 (372)
..+....... .+ +.+..... .-......+.|+|+++.++.. ..+..|.+||+.+++..... .+...+..
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~-~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~ 192 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTK-LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGH 192 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEE
T ss_pred EEEEecccccCCCCCEEEeccCCc-cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCccccc
Confidence 4433311100 00 00000000 000000013578888877654 35668999999988765444 46678899
Q ss_pred EEEeCC-CCCEEEEEeCC------CeEEEEecccc-----cCC--CCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEee
Q 017421 275 VCFGDE-SGHLIYSGSDD------NLCKVNSVLLL-----TRS--INPCNKYLFNPCNKYLIIYLILVISIYSPNILLDN 340 (372)
Q Consensus 275 ~~~sp~-~~~~l~s~~~d------g~i~vwd~~~~-----~~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~ 340 (372)
+.|+ | ++..|+..+.+ ..|.+||+... ..+ ...+..+.|+|+|+.|+......- ..++.|.+||
T Consensus 193 ~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d 270 (396)
T 3c5m_A 193 PIYR-PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG-QTDRVIYKAN 270 (396)
T ss_dssp EEEE-TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETT-TCCEEEEEEC
T ss_pred ceEC-CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCC-CccceEEEEE
Confidence 9999 6 78877766543 35888887522 122 224778899999998876631100 0014488888
Q ss_pred cccceE
Q 017421 341 YFLLRT 346 (372)
Q Consensus 341 ~~~~~~ 346 (372)
+.+++.
T Consensus 271 ~~~g~~ 276 (396)
T 3c5m_A 271 PETLEN 276 (396)
T ss_dssp TTTCCE
T ss_pred CCCCCe
Confidence 877754
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=2.4e-12 Score=114.83 Aligned_cols=206 Identities=10% Similarity=0.057 Sum_probs=140.5
Q ss_pred cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC----CeEE
Q 017421 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVH 194 (372)
Q Consensus 119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~ 194 (372)
.+..+...+.+++|+|+|++++++..++.|.+||..++...... ..+...+.+++++|+++++++...+ +.|.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe---eCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 34556667899999999998888888899999999877543321 1234469999999999988877666 6899
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEeecC
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRILAH 268 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~ 268 (372)
+||..++........ . .+...+..++++|+|+++++... .+.|..+|..+++... +..+
T Consensus 116 ~~d~~~~~~~~~~~~--~------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 180 (333)
T 2dg1_A 116 AATENGDNLQDIIED--L------------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQN 180 (333)
T ss_dssp EECTTSCSCEEEECS--S------------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEE
T ss_pred EEeCCCCEEEEEEcc--C------------ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecC
Confidence 999987765322110 0 12236899999999988777653 3567777766554432 2233
Q ss_pred CCCeEEEEEeCCCCCEEEE-EeCCCeEEEEeccc----cc--------CC--CCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 269 TSDVNTVCFGDESGHLIYS-GSDDNLCKVNSVLL----LT--------RS--INPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s-~~~dg~i~vwd~~~----~~--------~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
...+..++|+ ++++.|+. .+.++.|.+||+.. +. .. ...+..++++++|++.++.. .+
T Consensus 181 ~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~------~~ 253 (333)
T 2dg1_A 181 ISVANGIALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY------GQ 253 (333)
T ss_dssp ESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE------TT
T ss_pred CCcccceEEC-CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc------CC
Confidence 3467899999 89886654 45678999999842 10 00 13577899999998766553 23
Q ss_pred ceEEEeecccceEEEEE
Q 017421 334 PNILLDNYFLLRTFYSF 350 (372)
Q Consensus 334 ~~i~lw~~~~~~~~~~~ 350 (372)
+.|.+|+. .++.+..+
T Consensus 254 ~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 254 GRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TEEEEECT-TSCEEEEE
T ss_pred CEEEEECC-CCCEEEEE
Confidence 56667766 34444443
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.52 E-value=3.3e-12 Score=110.27 Aligned_cols=196 Identities=9% Similarity=-0.005 Sum_probs=139.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...+.+++++++|+++++.. ++.|.+|+......... .......+..++++++++++++...++.|.+|+..+...
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL---PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC---CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee---ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 35688899999999666655 88999999876532211 112223588999999999777777788999997654432
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH 283 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 283 (372)
..... .....+..++++|+|+++++...++.|.+||............+...+.+++++ ++|.
T Consensus 142 ~~~~~----------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~g~ 204 (270)
T 1rwi_B 142 TVLPF----------------TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVD-EAGT 204 (270)
T ss_dssp EECCC----------------CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEEC-TTCC
T ss_pred Eeecc----------------ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEEC-CCCC
Confidence 11100 111256789999999977777778899999998766543333344678999999 8888
Q ss_pred EEEEEeCCCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 284 LIYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 284 ~l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
++++...++.|.+||..... .+...+.+++++|+|+++++.. .++.|++++....+.
T Consensus 205 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~------~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR------GNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG------GGTEEEEECCCGGGS
T ss_pred EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC------CCCEEEEEcCCCccc
Confidence 77777778899999986321 2235689999999998665553 467888888766543
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=1.5e-11 Score=109.74 Aligned_cols=205 Identities=10% Similarity=-0.056 Sum_probs=141.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc--cCCcceEEEEECCCCCEEEEEe--CCCeEEEEECC
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYAS--MSPIVHIVDVG 199 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~ 199 (372)
...+..++++++++.+++...++.|.+||+.+++......... +....+..+++ ++..++++. .++.|.++|+.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECC
Confidence 4678899999998655555478999999999886554432221 00113556677 445555554 48899999999
Q ss_pred CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----------CeEEEEECCCCeEEEEeecC-
Q 017421 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----------DCIYVYDLEANKLSLRILAH- 268 (372)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----------g~i~iwd~~~~~~~~~~~~~- 268 (372)
+++........ .....+.++|+|++++++..+ +.|.++|..+++....+...
T Consensus 161 t~~~~~~i~~g-----------------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 161 TDKVVDELTIG-----------------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp TTEEEEEEECS-----------------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred CCeEEEEEEcC-----------------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 98764433211 134578899999877776654 78999999999887776532
Q ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccccC--------CCCCeeEEEeccCCCeEEEEe-eeeEEEeeceEEEe
Q 017421 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLTR--------SINPCNKYLFNPCNKYLIIYL-ILVISIYSPNILLD 339 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~--------~~~~v~~~~~s~~g~~l~~~~-~~~~~~~d~~i~lw 339 (372)
...+..++++ |+++.|+++.. .|.+||+.+.+- .......++++|++..|.++. ... ..++.|.+|
T Consensus 224 g~~p~~la~~-~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y--~~~~~V~v~ 298 (328)
T 3dsm_A 224 GDWPSEVQLN-GTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY--QQQGIVYRY 298 (328)
T ss_dssp TCCCEEEEEC-TTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS--SSEEEEEEE
T ss_pred CCCceeEEEe-cCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc--ccCCEEEEE
Confidence 3468999999 88888887754 899999864321 135678999999655555542 000 136788999
Q ss_pred ecccceEEEEEeee
Q 017421 340 NYFLLRTFYSFMVH 353 (372)
Q Consensus 340 ~~~~~~~~~~~~~h 353 (372)
|.. ++.+..+.+-
T Consensus 299 d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 299 SPQ-GKLIDEFYVG 311 (328)
T ss_dssp CTT-CCEEEEEEEE
T ss_pred CCC-CCEEEEEEec
Confidence 988 8888877543
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.51 E-value=2.8e-12 Score=114.98 Aligned_cols=182 Identities=14% Similarity=0.110 Sum_probs=121.3
Q ss_pred CceEEEEECCCCCEEEEEeCC---C--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC---------
Q 017421 125 SRAYVSQFSADGSLFVAGFQA---S--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--------- 190 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~d---g--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 190 (372)
..+..++|+|||++|+..+.+ + .|.+|++.+++.... . .... +..+.|+||++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-~---~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI-L---EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE-E---EESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE-E---cCCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 568889999999999887653 2 488888887754332 1 2223 8899999999999887632
Q ss_pred ------------------CeEEEEECCCCce-eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC--
Q 017421 191 ------------------PIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-- 249 (372)
Q Consensus 191 ------------------g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg-- 249 (372)
..|++||+.+++. ..+.. . .+..+.|+||| +++++..+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~------------------~-~~~~~~~spdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK------------------P-RFSSGIWHRDK-IVVNVPHREII 193 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE------------------E-TTCEEEEETTE-EEEEEECCCSS
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC------------------C-CcccccCCCCe-EEEEEeccccc
Confidence 5689999988765 22211 0 35678999999 777775542
Q ss_pred -----eEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC--------CeEEEEecc-----cccCCCCCeeE
Q 017421 250 -----CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD--------NLCKVNSVL-----LLTRSINPCNK 311 (372)
Q Consensus 250 -----~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d--------g~i~vwd~~-----~~~~~~~~v~~ 311 (372)
...+|.+.+++. ..+..+ ..+..+ + |+|+.|+.++.+ ..|.+|| . ....+...+..
T Consensus 194 ~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--s-pdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~ 267 (347)
T 2gop_A 194 PQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--D-SDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQ 267 (347)
T ss_dssp CCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--E-ECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEE
T ss_pred ccccccccEEEeCCCce-EEeccC-cceeeE--C-CCCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCC
Confidence 334443335554 344444 455544 8 899988877644 3688887 2 11244566776
Q ss_pred -EEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 312 -YLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 312 -~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+.|+ +| +++++. .++.++|| +.+++.
T Consensus 268 ~~~~s-dg-~~~~~~------~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 268 AKIKD-GK-VYFTLF------EEGSVNLY-IWDGEI 294 (347)
T ss_dssp EEEET-TE-EEEEEE------ETTEEEEE-EESSSE
T ss_pred ccEEc-Cc-EEEEEe------cCCcEEEE-EcCCce
Confidence 8999 88 666654 46778888 765543
No 182
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=4.9e-13 Score=120.64 Aligned_cols=169 Identities=12% Similarity=0.022 Sum_probs=127.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE--------EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--------IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
.++.+++++...++++|+.++ +.||++..... ... .....+.. |+.++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999999999999874 66798754320 111 01223455 999999 99999998 889999999
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEE
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 277 (372)
+.+........ .|..++.++.+.+. .+++++.||.|.+||++++.... +...|+|++|
T Consensus 113 v~sl~~~~~~~----------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W 170 (388)
T 1xip_A 113 LEELSEFRTVT----------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV 170 (388)
T ss_dssp SSSTTCEEEEE----------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEE
T ss_pred chhhhccCccc----------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEE
Confidence 98765322211 13346777777654 38888999999999999887643 3458999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEeccccc-----------------CCCCCeeEEEeccCCCeEEEEe
Q 017421 278 GDESGHLIYSGSDDNLCKVNSVLLLT-----------------RSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 278 sp~~~~~l~s~~~dg~i~vwd~~~~~-----------------~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
+ |+| ++.|..||++++|+..... +|...|.++.|.++++++++..
T Consensus 171 S-pkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 171 T-NSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp C-SSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred c-CCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9 888 7789999999999876322 2678899999999999998763
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.49 E-value=4e-12 Score=110.45 Aligned_cols=187 Identities=12% Similarity=0.030 Sum_probs=136.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC-cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecc
Q 017421 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR-WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIH 213 (372)
Q Consensus 135 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 213 (372)
.++.|++++.++.|.+||.++++.+.+... +. ..+.++.++|+|+.++ +.++.|..||. +++.+......
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--- 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL---EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--- 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC---CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC---
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC---CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC---
Confidence 467899999999999999989977766332 22 3578899999999888 45788999999 67754433321
Q ss_pred cccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeEEEEeec------CCCCeEEEEEeCCCCCEEE
Q 017421 214 DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILA------HTSDVNTVCFGDESGHLIY 286 (372)
Q Consensus 214 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~sp~~~~~l~ 286 (372)
....+.++.+.|+|+++++.+. ++.|..+|. +++.+..+.. +......+++. ++|++++
T Consensus 75 ------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~-~~G~~lv 140 (276)
T 3no2_A 75 ------------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKN-KKGNYLV 140 (276)
T ss_dssp ------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEEC-TTSCEEE
T ss_pred ------------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceEC-CCCCEEE
Confidence 1125788899999999999887 778888886 6777666642 11234556777 8999999
Q ss_pred EEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 287 SGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 287 s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
+...++.|..||.. .+ .....+.++.+.++|+.++++.+ ++.|..+|..+|+.+..+.
T Consensus 141 ~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~------~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 141 PLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGD------AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBT------TSEEEEECTTTCCEEEEEE
T ss_pred EecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCC------CCeEEEEeCcCCcEEEEec
Confidence 99999999999986 32 22245677888999998887742 3456666666666666554
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=2.3e-13 Score=124.14 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=128.7
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEE-------------------EEECCCCCEEEEE--
Q 017421 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD-------------------TSLSPDQRHLVYA-- 187 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-- 187 (372)
.+.|+|||++|+.++.++.|++|++.++....... . +...... +.|+|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~-~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT-V--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-C--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe-c--ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 37899999999999999999999998875432211 1 1111112 4578888877654
Q ss_pred ---eCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCC------CeEEEEECC
Q 017421 188 ---SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSD------DCIYVYDLE 257 (372)
Q Consensus 188 ---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~d------g~i~iwd~~ 257 (372)
..+..|.+||+.+++...+.. +...+..+.|+| +++.|+..+.+ ..|.+||+.
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~-----------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQ-----------------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEE-----------------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred ccCCCcceEEEEECCCCcEEeecc-----------------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 356789999999887544331 223688999999 78877766543 368899987
Q ss_pred CCeEEEEeecC--CCCeEEEEEeCCCCCEEEEEeCC-----CeEEEEecccccC----CCCCeeEEEecc-CCCeEEEEe
Q 017421 258 ANKLSLRILAH--TSDVNTVCFGDESGHLIYSGSDD-----NLCKVNSVLLLTR----SINPCNKYLFNP-CNKYLIIYL 325 (372)
Q Consensus 258 ~~~~~~~~~~~--~~~v~~~~~sp~~~~~l~s~~~d-----g~i~vwd~~~~~~----~~~~v~~~~~s~-~g~~l~~~~ 325 (372)
.++. ..+..+ ...+..++|+ |+|+.|+.++.+ +.|++||+.+... ...... +.|+| +|++++.+.
T Consensus 225 ~~~~-~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 225 GSNV-RKIKEHAEGESCTHEFWI-PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp SCCC-EESSCCCTTEEEEEEEEC-TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEE
T ss_pred CCce-eEeeccCCCccccceEEC-CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEec
Confidence 6653 333333 2257889999 999977766543 4499999864321 111223 89999 999887653
Q ss_pred eee-EE---------EeeceEEEeecccceE
Q 017421 326 ILV-IS---------IYSPNILLDNYFLLRT 346 (372)
Q Consensus 326 ~~~-~~---------~~d~~i~lw~~~~~~~ 346 (372)
... +. -.+..|.+||..+++.
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 302 CDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCcceeeccccccccCCCCcEEEEecccCce
Confidence 110 00 0236788999887764
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.48 E-value=3.4e-12 Score=125.60 Aligned_cols=203 Identities=10% Similarity=0.005 Sum_probs=131.9
Q ss_pred CCCCceEEEEECCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe----
Q 017421 122 QTTSRAYVSQFSADGSLFVAG-----FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI---- 192 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---- 192 (372)
+|...+.+++|||||++||.+ +.+..|++||+.+++.+.. ...... ....++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCBSCC--TTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-cccCcc--cccceEEecCCCEEEEEEecCCCCCc
Confidence 455678999999999999843 3446899999998854311 011111 1267999999999999988765
Q ss_pred ---------EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC
Q 017421 193 ---------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD----CIYVYDLEAN 259 (372)
Q Consensus 193 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg----~i~iwd~~~~ 259 (372)
|++|++.++.......... ..+...+..+.|+|||++|+.++.++ .|++||..++
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHER------------TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK 262 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECC------------CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred cccCCCCCEEEEEECCCCchhceEEEec------------CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence 9999998876321111100 02334788999999999998777665 6777776555
Q ss_pred eEEEEeecCCCCeEEEEEeCCCCCEEEEEe---CCCeEEEEeccccc--------CC--CCCeeEEEeccCCCeEEEEee
Q 017421 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGS---DDNLCKVNSVLLLT--------RS--INPCNKYLFNPCNKYLIIYLI 326 (372)
Q Consensus 260 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~---~dg~i~vwd~~~~~--------~~--~~~v~~~~~s~~g~~l~~~~~ 326 (372)
+. ..+..+...+....++ +|.+++... .++.|.+||+.... .+ ...+..++|+ ++.++++..
T Consensus 263 ~~-~~l~~~~~~~~~~~~~--~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~- 337 (695)
T 2bkl_A 263 DF-RLLVKGVGAKYEVHAW--KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL- 337 (695)
T ss_dssp SC-EEEEECSSCCEEEEEE--TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE-
T ss_pred ce-EEeecCCCceEEEEec--CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE-
Confidence 43 4455566666677674 444555544 25789999985421 22 3457778887 555555553
Q ss_pred eeEEEeeceEEEeecc-cceEEEE
Q 017421 327 LVISIYSPNILLDNYF-LLRTFYS 349 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~-~~~~~~~ 349 (372)
.|+..+||.+. .++....
T Consensus 338 -----~dg~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 338 -----KDATSEVRVATLKGKPVRT 356 (695)
T ss_dssp -----ETTEEEEEEEETTCCEEEE
T ss_pred -----ECCEEEEEEEeCCCCeeEE
Confidence 35666666554 3444433
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=1.6e-11 Score=106.63 Aligned_cols=204 Identities=9% Similarity=-0.020 Sum_probs=143.8
Q ss_pred CceeEeeeeeCCCCCccccCCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCC
Q 017421 103 DCCHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 181 (372)
+..+.+++....+..+.+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..... +....+.++.+.++|
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~--~~~~~~~~~~~~~dG 88 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA--PAGCEMQTARILPDG 88 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC--CTTCEEEEEEECTTS
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC--CCCccccccEECCCC
Confidence 3344444433444445555444 4688999999999888 45678999998 6766665432 222358889999999
Q ss_pred CEEEEEeC-CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q 017421 182 RHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (372)
Q Consensus 182 ~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 260 (372)
+.+++.+. ++.|..+|. +++........... .++......+++.++|+++++...++.|..||.+ ++
T Consensus 89 ~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~----------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 89 NALVAWCGHPSTILEVNM-KGEVLSKTEFETGI----------ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp CEEEEEESTTEEEEEECT-TSCEEEEEEECCSC----------SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC----------CcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 99999887 778888886 45543333221110 0122244556788999999999999999999998 99
Q ss_pred EEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc------C------CCCCeeEEEeccCCCeEEEEe
Q 017421 261 LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT------R------SINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 261 ~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~------~------~~~~v~~~~~s~~g~~l~~~~ 325 (372)
.+.++... ..+.++... ++|+++++++.++.|..+|..+.+ . .-..+..+...++|..+++..
T Consensus 157 ~~w~~~~~-~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECS-SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 98888754 456677787 899999999888899999887332 1 112378888999999888773
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.46 E-value=3.3e-11 Score=114.87 Aligned_cols=193 Identities=12% Similarity=-0.039 Sum_probs=140.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC--CCceeeecceee
Q 017421 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG--SGTMESLANVTE 211 (372)
Q Consensus 134 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~ 211 (372)
|.+.++++...++.|.++|..+++.+..... ...+..+.|+||++++++++.++.|.+||+. +++...... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~----g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~--~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT----GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK--I 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC----SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE--C
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC----CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe--c
Confidence 4455667777889999999999876655322 2247789999999999999999999999996 555432221 1
Q ss_pred cccccceeccCCCCccccEEEEEEc----CCCCEEEEEeC-CCeEEEEECCCCeEEEEeecC-----------CCCeEEE
Q 017421 212 IHDGLDFSAADDGGYSFGIFSLKFS----TDGRELVAGSS-DDCIYVYDLEANKLSLRILAH-----------TSDVNTV 275 (372)
Q Consensus 212 ~~~~~~~~~~~~~~h~~~i~~~~~s----p~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~ 275 (372)
. .....++|+ |||++++++.. +++|.++|..+.+.+..+... ...+..+
T Consensus 239 G---------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 239 G---------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp C---------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred C---------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 1 146789999 69998877655 589999999999888776521 1257788
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFY 348 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~ 348 (372)
..++....+++....+|.|.++|..... ........+.|+|+|++++++.. .++.|.++|..+++.+.
T Consensus 304 ~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 304 LASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEE
Confidence 8883334455566677999999976421 22345668899999999887742 36778888888888765
Q ss_pred EEee
Q 017421 349 SFMV 352 (372)
Q Consensus 349 ~~~~ 352 (372)
...+
T Consensus 379 ~i~v 382 (567)
T 1qks_A 379 IEDT 382 (567)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5443
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.45 E-value=5.2e-11 Score=106.10 Aligned_cols=184 Identities=15% Similarity=0.058 Sum_probs=126.0
Q ss_pred CCCCceEEEEECCCCCEEEEEeCC----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC------CC
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM------SP 191 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg 191 (372)
.+...+.+++++|+|+++++...+ +.|.+||..++..... .........+.++.++|+++++++... .+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI-IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE-ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE-EccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 456789999999999988877666 6899999887643321 111123346899999999988776653 35
Q ss_pred eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEEECCC-CeEEEE-----
Q 017421 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEA-NKLSLR----- 264 (372)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~~~-~~~~~~----- 264 (372)
.|..+|..+++...... ....+..++|+|+++.|+ +.+.++.|.+||+.+ +.....
T Consensus 163 ~l~~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~ 225 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQ-----------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 225 (333)
T ss_dssp EEEEECTTSCCEEEEEE-----------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE
T ss_pred eEEEEeCCCCEEEEeec-----------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceE
Confidence 67677766554432211 112578899999998664 445678999999964 332211
Q ss_pred ---eecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-----ccCCC------CCeeEEEeccCCCeEEEEe
Q 017421 265 ---ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-----LTRSI------NPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 265 ---~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----~~~~~------~~v~~~~~s~~g~~l~~~~ 325 (372)
+.++ ..+..++++ ++|+++++...++.|.+||... +.... ..+.+++|+|+++.|++++
T Consensus 226 ~~~~~~~-~~~~~i~~d-~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 226 PYYFTGH-EGPDSCCID-SDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp EEECCSS-SEEEEEEEB-TTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred EEecCCC-CCCCceEEC-CCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 1122 367889999 8999888887889999999751 11121 2589999999987776553
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.44 E-value=1.1e-11 Score=111.07 Aligned_cols=166 Identities=11% Similarity=0.150 Sum_probs=115.8
Q ss_pred CceEEEEECCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC---C-
Q 017421 125 SRAYVSQFSADGSLFVAGF---------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS---P- 191 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g- 191 (372)
..+..+++ ||++++... .++.|.+|++.++... . . ..+..+.|+|||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~---l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-F---I----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-E---E----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-E---c----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 45677778 898887642 2567999999887532 2 1 358899999999999987653 3
Q ss_pred -eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----------------------
Q 017421 192 -IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------------------- 248 (372)
Q Consensus 192 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d---------------------- 248 (372)
.|.+|++.+++...+.. +.. +..+.|+|||+.|+.++.+
T Consensus 85 ~~l~~~~~~~g~~~~l~~-----------------~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 85 SEIWVADLETLSSKKILE-----------------AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEEEETTTTEEEEEEE-----------------ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred ceEEEEECCCCceEEEEc-----------------CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 48888988876544332 112 8889999999998887642
Q ss_pred -----CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC-------eEEEEeccc-----ccCCCCCeeE
Q 017421 249 -----DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN-------LCKVNSVLL-----LTRSINPCNK 311 (372)
Q Consensus 249 -----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg-------~i~vwd~~~-----~~~~~~~v~~ 311 (372)
..|.+||+.+++.+..+.. . .+..++|+ |+| +++++..++ ...||.+.. +..+ ..+..
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~s-pdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~ 221 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWH-RDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYA 221 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEE-TTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEE
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCC-CCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceee
Confidence 5699999998887455554 3 78899999 899 777776542 345554431 1122 33333
Q ss_pred EEeccCCCeEEEEe
Q 017421 312 YLFNPCNKYLIIYL 325 (372)
Q Consensus 312 ~~~s~~g~~l~~~~ 325 (372)
++|+|+.|+..+
T Consensus 222 --~spdg~~l~~~~ 233 (347)
T 2gop_A 222 --VDSDGERILLYG 233 (347)
T ss_dssp --EEECSSCEEEEE
T ss_pred --ECCCCCEEEEEE
Confidence 499999888764
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.43 E-value=2.3e-11 Score=104.90 Aligned_cols=192 Identities=10% Similarity=-0.017 Sum_probs=130.3
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 017421 126 RAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (372)
...+++++++|++++ +...++.|.+|+..+...... .......+.+++++++++++++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL---PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC---CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE---eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 788999999999777 546778999999765432211 122223578899999998666655 889999998765432
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 284 (372)
.... .....+..++++|+|+++++...++.|.+|+..+.............+.+++++ ++|++
T Consensus 101 ~~~~----------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g~l 163 (270)
T 1rwi_B 101 VLPF----------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD-NSGNV 163 (270)
T ss_dssp ECCC----------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC-TTCCE
T ss_pred eeec----------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe-CCCCE
Confidence 1110 111368899999999988877778999999876554433222333467899999 88987
Q ss_pred EEEEeCCCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421 285 IYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL 344 (372)
Q Consensus 285 l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~ 344 (372)
+++...++.|.+||..... .....+.+++++++|.+.++.. .++.|.+|+....
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~------~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH------NTNQVVKLLAGST 223 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET------TTSCEEEECTTCS
T ss_pred EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEEC------CCCcEEEEcCCCC
Confidence 7777778899999986321 2225678999999996555542 2455666665443
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.39 E-value=8.7e-11 Score=106.15 Aligned_cols=187 Identities=15% Similarity=0.172 Sum_probs=120.5
Q ss_pred CceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCC-CEEEEEeCCCeEEEEECCC-
Q 017421 125 SRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ-RHLVYASMSPIVHIVDVGS- 200 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~- 200 (372)
.....++|+|||++|+++.. ++.|.+||+.+++.+.......+ ...+.+.|++ ..+++.+.||.+.+|++..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~----~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG----CWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT----EEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC----cceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 45678999999999988764 57899999999865543111111 2224455654 4566666777777777654
Q ss_pred Cceeeecc---eeeccc------------ccceec--------cCCC-C-------------------ccccEEEEEEcC
Q 017421 201 GTMESLAN---VTEIHD------------GLDFSA--------ADDG-G-------------------YSFGIFSLKFST 237 (372)
Q Consensus 201 ~~~~~~~~---~~~~~~------------~~~~~~--------~~~~-~-------------------h~~~i~~~~~sp 237 (372)
++...... ...... ...+.. +... . .......++|+|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 33220000 000000 000000 0000 0 000111278999
Q ss_pred CCCEEEEEeC-----------CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc--c-
Q 017421 238 DGRELVAGSS-----------DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL--T- 303 (372)
Q Consensus 238 ~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~--~- 303 (372)
+++.++++.. ...|.+||+.+++.+.++..+. +.+++|+ |+|++|++++. +.|.+||..+. +
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~s-pdg~~l~v~n~-~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTID-QQRNLMLTLDG-GNVNVYDISQPEPKL 339 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEE-TTTTEEEEECS-SCEEEEECSSSSCEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEEC-CCCCEEEEeCC-CeEEEEECCCCccee
Confidence 9887776543 3489999999999999998776 8999999 99999998886 99999998876 3
Q ss_pred -----CCCCCeeEEEeccCCC
Q 017421 304 -----RSINPCNKYLFNPCNK 319 (372)
Q Consensus 304 -----~~~~~v~~~~~s~~g~ 319 (372)
........++++|+|.
T Consensus 340 ~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 340 LRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETTSCSSEEEEEECCCSC
T ss_pred eEEeccCCCCcEEEEecCCCC
Confidence 4556778999999986
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.39 E-value=4e-11 Score=118.28 Aligned_cols=200 Identities=9% Similarity=0.007 Sum_probs=131.4
Q ss_pred eEEEEECCCCCEEEEEeCCCc----------------EEEEeCCCCeEEEEee-ecccCCcceEEEEECCCCCEEEEEeC
Q 017421 127 AYVSQFSADGSLFVAGFQASQ----------------IRIYDVERGWKIQKDI-LAKSLRWTVTDTSLSPDQRHLVYASM 189 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~----------------i~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~ 189 (372)
+..++|+|||+.|+.++.++. |++|++.++....... ....+...+..+.|+|||++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 667999999999999887766 9999998764211111 12234445789999999999988764
Q ss_pred -----CCeEEEEECCC------CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeEEEE
Q 017421 190 -----SPIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVY 254 (372)
Q Consensus 190 -----dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i~iw 254 (372)
+..|++||+.+ +... ...+.. +...+.. .|+|+|+.|+..+.. +.|.+|
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~l~~--------------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILK-WVKLID--------------NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCC-CEEEEC--------------SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred ccCCCccEEEEEECcccccccCCccc-eEEeeC--------------CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 56899999976 4210 111110 1123333 488999888766653 369999
Q ss_pred ECCCCe--EEEEeecCCC--CeEEEEEeCCCCCEEEEEeCCCe--EEEEeccc------ccCCCCCeeEEEeccCCCeEE
Q 017421 255 DLEANK--LSLRILAHTS--DVNTVCFGDESGHLIYSGSDDNL--CKVNSVLL------LTRSINPCNKYLFNPCNKYLI 322 (372)
Q Consensus 255 d~~~~~--~~~~~~~~~~--~v~~~~~sp~~~~~l~s~~~dg~--i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~ 322 (372)
|+.++. ....+..|.. .+..++|+ +++.++++...|+. |.+||+.. +..+...+..+.++|++..++
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 998764 2244444543 67889998 78888888888885 55566522 223456678899999998766
Q ss_pred EEeeeeEEEeeceEEEeecccce
Q 017421 323 IYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 323 ~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
...... .-.+++.+||+.+++
T Consensus 396 ~~~ss~--~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 396 YQFTSF--LSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECS--SCCCEEEEEETTSSS
T ss_pred EEEeCC--CCCCEEEEEECCCCc
Confidence 442110 013566667666554
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=6e-11 Score=117.55 Aligned_cols=200 Identities=12% Similarity=0.063 Sum_probs=127.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe-----
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI----- 192 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----- 192 (372)
|...+..++|||||++||.+..+ ..|++||+.+++.+.... ....+..++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL----KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE----EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC----CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 33468899999999999877543 369999999986654311 1112467899999 99998877554
Q ss_pred ---------EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC-----eEEEEECCC
Q 017421 193 ---------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEA 258 (372)
Q Consensus 193 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg-----~i~iwd~~~ 258 (372)
|++|++.++.......... ..+...+..+.|+|||++|+..+.++ .|++||+.+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFAT------------PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECC------------TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred cccCCCCCEEEEEECCCCchhCEEEecc------------CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 8899987765321111100 01223578999999999988777543 799999987
Q ss_pred C--eEEEEeecCCCCeEEEEEeCCCCCEEEEEeC----CCeEEEEecccc--------cCCCCCeeEEEeccCCCeEEEE
Q 017421 259 N--KLSLRILAHTSDVNTVCFGDESGHLIYSGSD----DNLCKVNSVLLL--------TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 259 ~--~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~----dg~i~vwd~~~~--------~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
+ ++...+..+...+... ++ ++|+.|+..+. ++.|.+||+... ..+...+..+.|+ ++.++++.
T Consensus 304 ~~~~~~~~l~~~~~~~~~~-~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~ 380 (741)
T 1yr2_A 304 GKIGPVTALIPDLKAQWDF-VD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASY 380 (741)
T ss_dssp TEECCCEEEECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEE
T ss_pred CCCcccEEecCCCCceEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEE
Confidence 7 3145565565555555 44 67887777765 345999997642 1233345667776 44444444
Q ss_pred eeeeEEEeeceEEEeecc-cceEEE
Q 017421 325 LILVISIYSPNILLDNYF-LLRTFY 348 (372)
Q Consensus 325 ~~~~~~~~d~~i~lw~~~-~~~~~~ 348 (372)
. .|+..+||.+. +++..+
T Consensus 381 ~------~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 381 I------HDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp E------ETTEEEEEEEETTSCEEE
T ss_pred E------ECCEEEEEEEeCCCCcee
Confidence 3 35555555443 344333
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.39 E-value=5e-11 Score=117.26 Aligned_cols=196 Identities=12% Similarity=0.019 Sum_probs=128.0
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEeCCCCeEEEE-eeecccCCcceEEEEECCCCCEEEEEeCCC--
Q 017421 128 YVSQFSADGSLFVAGFQASQ-------------IRIYDVERGWKIQK-DILAKSLRWTVTDTSLSPDQRHLVYASMSP-- 191 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg~-------------i~vwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-- 191 (372)
..++|+|||+.|+.++.+.. |++|++.++..... ......+...+..+.|+|||++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999999988776 99999987742111 112334445688999999999998887665
Q ss_pred --eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe---CCCeEEEEECCCCeE---EE
Q 017421 192 --IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS---SDDCIYVYDLEANKL---SL 263 (372)
Q Consensus 192 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s---~dg~i~iwd~~~~~~---~~ 263 (372)
.|++|+..++....+.. +...+....+ ++|.+++.+. .++.|.+||+.++.. ..
T Consensus 251 ~~~l~~~~~~~~~~~~l~~-----------------~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVK-----------------GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp EEEEEEECTTCSSCEEEEE-----------------CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred ceEEEEEcCCCCceEEeec-----------------CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 67777665554332221 1123444555 5666444433 257899999987652 23
Q ss_pred EeecC-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-------ccCC-CCCeeEEEeccCCCeEEEEeeeeEEEeec
Q 017421 264 RILAH-TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-------LTRS-INPCNKYLFNPCNKYLIIYLILVISIYSP 334 (372)
Q Consensus 264 ~~~~~-~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-------~~~~-~~~v~~~~~s~~g~~l~~~~~~~~~~~d~ 334 (372)
.+..+ ...+..++|+ ++.++++...|+..+||.+.. +..+ ...+..+.++|+++.++...... .-++
T Consensus 313 l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~--~~P~ 388 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSF--TTPR 388 (695)
T ss_dssp EECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEET--TEEE
T ss_pred EecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCC--CCCC
Confidence 33333 4467888887 677888889999988886541 1122 45677888999998776542110 0245
Q ss_pred eEEEeecccce
Q 017421 335 NILLDNYFLLR 345 (372)
Q Consensus 335 ~i~lw~~~~~~ 345 (372)
++++||+.+++
T Consensus 389 ~v~~~d~~~g~ 399 (695)
T 2bkl_A 389 QIYKTSVSTGK 399 (695)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCc
Confidence 67777776654
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.38 E-value=8.3e-11 Score=104.81 Aligned_cols=195 Identities=10% Similarity=-0.059 Sum_probs=133.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (372)
.....+.+. +++++++...++.|.+||..+++.+.... ....+..++++++++.+++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 456778874 35555666667999999999987766542 1235889999988854444447899999999988764
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH 283 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 283 (372)
........ .+.......+++ .+++++++.. .++.|.++|+.+++.+..+... .....++++ ++|+
T Consensus 119 ~~i~~g~~-----------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~-~dG~ 184 (328)
T 3dsm_A 119 GYIECPDM-----------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMD-KYNK 184 (328)
T ss_dssp EEEECTTC-----------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEEC-TTSE
T ss_pred EEEEcCCc-----------cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEc-CCCC
Confidence 43322110 011113445666 3444444443 4889999999999988877643 345788998 8998
Q ss_pred EEEEEeCC----------CeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 284 LIYSGSDD----------NLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 284 ~l~s~~~d----------g~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+++++..+ +.|.++|..+.+ .....+..++|+|+++.|+++. ..|.+||..+++.
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~--------~~v~~~d~~t~~~ 256 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN--------NDIWRMPVEADRV 256 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--------SSEEEEETTCSSC
T ss_pred EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--------cEEEEEECCCCce
Confidence 77777654 789999987432 1123679999999999998873 2666777766653
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.5e-11 Score=111.05 Aligned_cols=136 Identities=10% Similarity=0.111 Sum_probs=106.5
Q ss_pred ccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 017421 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 199 (372)
...++. |+.++| |+++|+++ .++.|++||+.+...... ...+..++.++.+.+.. +++++.||.|.+||+.
T Consensus 84 ~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~---~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 84 EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRT---VTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLR 154 (388)
T ss_dssp EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEE---EEECSSCEEEEEECSSE--EEEEETTSEEEEEETT
T ss_pred EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCc---cceeecceeeEEecCCC--EEEEECCCCEEEEEcc
Confidence 345677 999999 99999998 789999999976543222 23444568887777643 8888999999999999
Q ss_pred CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE--EEEe------e---cC
Q 017421 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL--SLRI------L---AH 268 (372)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~--~~~~------~---~~ 268 (372)
.+..... ...|++++|+|+| ++.|..||++++|+...++. ..++ . +|
T Consensus 155 ~~~~~~~--------------------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~ 212 (388)
T 1xip_A 155 TKSTKQL--------------------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE 212 (388)
T ss_dssp TCCEEEE--------------------EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT
T ss_pred CCccccc--------------------cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCC
Confidence 8775321 1279999999999 67899999999999988775 5566 2 36
Q ss_pred CCCeEEEEEeCCCCCEEEE
Q 017421 269 TSDVNTVCFGDESGHLIYS 287 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s 287 (372)
...|.++.|. +++.++++
T Consensus 213 ~~~V~sI~wl-~~~~flv~ 230 (388)
T 1xip_A 213 EYSPLSVTIL-SPQDFLAV 230 (388)
T ss_dssp TSEEEEEEES-SSSEEEEE
T ss_pred CeeEEEEEEe-cCCeEEEE
Confidence 7889999999 88888776
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.33 E-value=2.4e-09 Score=93.29 Aligned_cols=181 Identities=9% Similarity=0.066 Sum_probs=129.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
+...+.+++++++|+++++...++.|.+||.. +.... .. .......+.+++++++++.+++...++.|..||.. +.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YP-LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ec-CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 45679999999999988877667899999988 53322 11 12233468999999999988877768899999986 33
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEEeCCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDES 281 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp~~ 281 (372)
.... ... .....+..++++|+|+++++...++.|.+||. +++... ....+...+..+++. ++
T Consensus 89 ~~~~-~~~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~-~~ 151 (299)
T 2z2n_A 89 IKEY-TLP--------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG-SD 151 (299)
T ss_dssp EEEE-ECS--------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred EEEE-eCC--------------CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc-CC
Confidence 2111 110 01236889999999998888777889999998 554332 223345678999998 88
Q ss_pred CCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEE
Q 017421 282 GHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|+++++...++.|..||... .......+..++++++|++.++.
T Consensus 152 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 152 NALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEc
Confidence 98888776778999998731 11234467899999999866554
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=1.9e-09 Score=97.67 Aligned_cols=212 Identities=13% Similarity=0.019 Sum_probs=130.8
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeec-ccC---CcceEEEEECCCCCEEEEEeC--CCe
Q 017421 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILA-KSL---RWTVTDTSLSPDQRHLVYASM--SPI 192 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~-~~~---~~~v~~~~~~~~~~~l~~~~~--dg~ 192 (372)
.++++|||++++++. .++.|.+||..+.+.+...... ... ......+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999887655543322 110 123568999999999998874 578
Q ss_pred EEEEECCCCceeee-cceeecccccceeccC---------C--------CCccccE--------------EEEEEcCCCC
Q 017421 193 VHIVDVGSGTMESL-ANVTEIHDGLDFSAAD---------D--------GGYSFGI--------------FSLKFSTDGR 240 (372)
Q Consensus 193 i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~---------~--------~~h~~~i--------------~~~~~sp~~~ 240 (372)
|.++| .+++.... ...... ..+.+.. + .+..... ....+.+++.
T Consensus 150 v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCC
Confidence 99999 98886544 332110 0011100 0 0000000 0112334444
Q ss_pred EEEEEeCCCeEEEEECCCCe--EEEEeec----------CCCCeEEEEEeCCCCCEEEEEeC----------CCeEEEEe
Q 017421 241 ELVAGSSDDCIYVYDLEANK--LSLRILA----------HTSDVNTVCFGDESGHLIYSGSD----------DNLCKVNS 298 (372)
Q Consensus 241 ~l~s~s~dg~i~iwd~~~~~--~~~~~~~----------~~~~v~~~~~sp~~~~~l~s~~~----------dg~i~vwd 298 (372)
.++..+..+.+.+.|+.... .+..+.. .......+.++ ++++.++++.. ++.|.++|
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s-~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYL-KSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEEC-CCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 33333456778888876542 2222211 11223447788 78887777643 35799999
Q ss_pred ccccc-----CCCCCeeEEEeccCCC-eEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 299 VLLLT-----RSINPCNKYLFNPCNK-YLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 299 ~~~~~-----~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+.+.+ .......+++|+|||+ .++++. ..++.|.++|..+++.+...
T Consensus 305 ~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~-----~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQISLGHDVDAISVAQDGGPDLYALS-----AGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCEEEEEEECCCCcCeEEECCCCCeEEEEEc-----CCCCeEEEEECCCCCEEeee
Confidence 97543 2334589999999999 666663 12789999999999988773
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.31 E-value=2.9e-09 Score=92.75 Aligned_cols=190 Identities=8% Similarity=-0.041 Sum_probs=133.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
....+.+++++++|+++++...++.|..|+.... . .... .......+.++.+.++++++++...++.|.+||. ++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-I-KEYT-LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-E-EEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-E-EEEe-CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 4567999999999998888777888999998632 2 2211 2223346889999999988887777889999998 554
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-eecCCCCeEEEEEeCCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDES 281 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~sp~~ 281 (372)
...... . .....+..++++++|+++++...++.|..||. +++.... .......+.+++++ ++
T Consensus 131 ~~~~~~-~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~ 193 (299)
T 2z2n_A 131 IREYEL-P--------------NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKG-ND 193 (299)
T ss_dssp EEEEEC-S--------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred EEEecC-C--------------CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC-CC
Confidence 322111 0 11236889999999988887777789999999 6654332 33345578899998 88
Q ss_pred CCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEE-eeeeEEEee
Q 017421 282 GHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIY-LILVISIYS 333 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~-~~~~~~~~d 333 (372)
|+++++...++.|.+||... .......+.+++++++|++.++. ..+.+..+|
T Consensus 194 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 194 DALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred CCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 88777766788999999731 11234568899999999866654 233444444
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=2.1e-09 Score=94.21 Aligned_cols=184 Identities=7% Similarity=0.049 Sum_probs=121.9
Q ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc-cCCcceEEEEECCCCCEEEEEeCC---------C
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASMS---------P 191 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---------g 191 (372)
.....+.+++++++|+++++ . +..|.+||..++.......... .....+..+.++|+|+++++.... .
T Consensus 51 ~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 51 TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 34678999999999995554 4 4679999998775432211111 122458899999999976654321 2
Q ss_pred eEEEEECCC-CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEEEC--CCCeE-----E
Q 017421 192 IVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDL--EANKL-----S 262 (372)
Q Consensus 192 ~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~--~~~~~-----~ 262 (372)
...+|.+.. +....... +....+.++|+|+++.|+ +.+.++.|.+||+ .++.. .
T Consensus 129 ~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 129 QGALYSLFPDHHVKKYFD-----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp CEEEEEECTTSCEEEEEE-----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred CcEEEEEECCCCEEEEee-----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 234554443 22211111 112567899999998764 5556789999997 45532 2
Q ss_pred EEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc------CCCCCeeEEEec-cCCCeEEEEe
Q 017421 263 LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT------RSINPCNKYLFN-PCNKYLIIYL 325 (372)
Q Consensus 263 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s-~~g~~l~~~~ 325 (372)
..+..+...+..++++ ++|++.++....+.|.+||..+.+ .....+++++|. |+++.|++++
T Consensus 192 ~~~~~~~~~p~g~~~d-~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 192 YKLEKEEQIPDGMCID-AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EECCGGGCEEEEEEEB-TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EECCCCCCCCCeeEEC-CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 2233344567899999 899888888788899999986322 344678999998 8988877664
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=1.6e-09 Score=95.07 Aligned_cols=202 Identities=9% Similarity=0.020 Sum_probs=129.9
Q ss_pred CCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 124 TSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 124 ~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
..-..+..|+|++ .++++...++.|..||..++.... . .....+.+++++++++++++ . ++.|.+||..+++
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~--~---~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR--V---TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE--E---ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE--E---eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 3445688999965 455666678899999998774421 1 12346899999999995554 4 5689999998876
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC---------CeEEEEECCC-CeEEEEeecCCCCe
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------DCIYVYDLEA-NKLSLRILAHTSDV 272 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d---------g~i~iwd~~~-~~~~~~~~~~~~~v 272 (372)
.......... .....++.++++|+|+++++.... ....+|.+.. ++. ..+..+....
T Consensus 85 ~~~~~~~~~~------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~p 151 (297)
T 3g4e_A 85 AVVLATVDND------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDIS 151 (297)
T ss_dssp EEEEEECCTT------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBE
T ss_pred EEEEEecCCC------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccc
Confidence 5433221100 112368899999999977654322 2234444432 333 2233344567
Q ss_pred EEEEEeCCCCCEEEE-EeCCCeEEEEecc--cc-----------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEE
Q 017421 273 NTVCFGDESGHLIYS-GSDDNLCKVNSVL--LL-----------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILL 338 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s-~~~dg~i~vwd~~--~~-----------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~l 338 (372)
..++|+ |+++.|+. .+.++.|.+||+. .. ......+..++++++|++.++.. ..+.|..
T Consensus 152 ngi~~s-pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~------~~~~v~~ 224 (297)
T 3g4e_A 152 NGLDWS-LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY------NGGRVIR 224 (297)
T ss_dssp EEEEEC-TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE------TTTEEEE
T ss_pred cceEEc-CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc------CCCEEEE
Confidence 899999 88886654 4567899999873 11 11234578899999997666552 1356778
Q ss_pred eecccceEEEEEee
Q 017421 339 DNYFLLRTFYSFMV 352 (372)
Q Consensus 339 w~~~~~~~~~~~~~ 352 (372)
||..+++.+..+..
T Consensus 225 ~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 225 LDPVTGKRLQTVKL 238 (297)
T ss_dssp ECTTTCCEEEEEEC
T ss_pred EcCCCceEEEEEEC
Confidence 88777776655543
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.29 E-value=2.1e-09 Score=102.48 Aligned_cols=239 Identities=12% Similarity=0.043 Sum_probs=156.5
Q ss_pred ccCCCCcc---ccCCceeEeeeee--CCCCCccccCCCCceEEEEEC----CCCCEEEEEeC-CCcEEEEeCCCCeEEEE
Q 017421 92 NYSGRGRF---SAADCCHMLSRYL--PVNGPWPVDQTTSRAYVSQFS----ADGSLFVAGFQ-ASQIRIYDVERGWKIQK 161 (372)
Q Consensus 92 ~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~ 161 (372)
.+++++++ .+.+..+.+++.. .......+.. ......++|+ |||++++++.. +++|.|+|..+.+.+..
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~ 281 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 281 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 34555543 2223345555543 2222222322 3456889999 69998877654 58999999887755543
Q ss_pred eeeccc-------------------C---------------------------------CcceEEEEECCCCCEEEEEe-
Q 017421 162 DILAKS-------------------L---------------------------------RWTVTDTSLSPDQRHLVYAS- 188 (372)
Q Consensus 162 ~~~~~~-------------------~---------------------------------~~~v~~~~~~~~~~~l~~~~- 188 (372)
...... + ......+.|+|++++++++.
T Consensus 282 i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 282 QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp EECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG
T ss_pred EeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC
Confidence 221100 0 00123568999999987766
Q ss_pred CCCeEEEEECCCCceeeecce-eecccccceeccCCCCccc-cEEEEEEcCCCC-EEEEEe-CCCeEEEEECCC------
Q 017421 189 MSPIVHIVDVGSGTMESLANV-TEIHDGLDFSAADDGGYSF-GIFSLKFSTDGR-ELVAGS-SDDCIYVYDLEA------ 258 (372)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~-~i~~~~~sp~~~-~l~s~s-~dg~i~iwd~~~------ 258 (372)
.++.|.++|+.+++....... ... .|.. .+. + ++|++. .++++. .++.|.++|..+
T Consensus 362 ~sn~V~ViD~~t~kl~~~i~vgg~~------------Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~ 427 (567)
T 1qks_A 362 ARNKLVVIDTKEGKLVAIEDTGGQT------------PHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDN 427 (567)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSSS------------BCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred CCCeEEEEECCCCcEEEEEeccCcC------------CCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccc
Confidence 478999999999876544332 111 1211 222 2 578754 445554 468999999987
Q ss_pred -CeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC-------CCeEEEEecccc-----cC---------------CCCCee
Q 017421 259 -NKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-------DNLCKVNSVLLL-----TR---------------SINPCN 310 (372)
Q Consensus 259 -~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-------dg~i~vwd~~~~-----~~---------------~~~~v~ 310 (372)
.+.+.++......-..+..+ |+++++.+... .++|.++|+.++ .. ....+.
T Consensus 428 ~~kvv~~i~~~g~g~~~i~~~-p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 428 AWKILDSFPALGGGSLFIKTH-PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp BTSEEEEEECSCSCCCCEECC-TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred cCEEEEEEecCCCCCEEEEeC-CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 67788887654444557788 99998888653 358999999876 10 134678
Q ss_pred EEEeccCCCeEEEEeeeeEEEe-----eceEEEeecccceEEEEEee
Q 017421 311 KYLFNPCNKYLIIYLILVISIY-----SPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 311 ~~~~s~~g~~l~~~~~~~~~~~-----d~~i~lw~~~~~~~~~~~~~ 352 (372)
.+.|+|+|+.+.++. | ++.|.++|..+++.+.....
T Consensus 507 ~~~~~~~G~~~~~s~------~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 507 QGEFNKDGTEVWFSV------WNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEECTTSSEEEEEE------ECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred eeeECCCCCEEEEEe------ecCCCCCCcEEEEECCCceEEEEeCC
Confidence 999999999988764 5 68999999999998877653
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.29 E-value=1.6e-09 Score=95.42 Aligned_cols=194 Identities=12% Similarity=0.067 Sum_probs=128.9
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCeEEEE-eeecc-cCCcceEEEEECCCCCEEEEEeCC---------
Q 017421 123 TTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKIQK-DILAK-SLRWTVTDTSLSPDQRHLVYASMS--------- 190 (372)
Q Consensus 123 ~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------- 190 (372)
+...+.+++++++ ++++++.. ...|.+||.. +..... ..... .....+.+++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4567899999999 76555544 4479999988 543221 11111 112358899999999887776554
Q ss_pred ------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEc----CCCCEEEEE-eCCCeEEEEECC-C
Q 017421 191 ------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS----TDGRELVAG-SSDDCIYVYDLE-A 258 (372)
Q Consensus 191 ------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s----p~~~~l~s~-s~dg~i~iwd~~-~ 258 (372)
+.|..|+.. ++...... +......++|+ |+++.|+.+ ..++.|.+||+. +
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~-----------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDT-----------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEE-----------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred cccCCCCeEEEECCC-CCEEEecc-----------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 567777765 44322211 11246789999 999765544 567899999986 4
Q ss_pred Ce-----EEEEeecCC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEee
Q 017421 259 NK-----LSLRILAHT-SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLI 326 (372)
Q Consensus 259 ~~-----~~~~~~~~~-~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~ 326 (372)
++ ....+..+. ..+..++++ ++|+++++...++.|.+||..+.. .+...+.+++|+|+|+.|.++..
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CccccceEEEECCCCCCCCCCceEEC-CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC
Confidence 44 222333333 567889999 899988888788999999986322 33467899999999997766632
Q ss_pred eeEEEeeceEEEeecc
Q 017421 327 LVISIYSPNILLDNYF 342 (372)
Q Consensus 327 ~~~~~~d~~i~lw~~~ 342 (372)
. ++.|..|+..
T Consensus 288 ~-----~~~l~~~~~~ 298 (314)
T 1pjx_A 288 E-----NNAVWKFEWQ 298 (314)
T ss_dssp T-----TTEEEEEECS
T ss_pred C-----CCeEEEEeCC
Confidence 1 3456666654
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=9.6e-10 Score=100.92 Aligned_cols=207 Identities=7% Similarity=-0.044 Sum_probs=134.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC--eEEEEECCCC
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSG 201 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~ 201 (372)
-.....++|+++++++++...++.|++||+.++..... ... ..... ++|+|+++.|+++..++ .|.+++...+
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~-~~~---~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV-HPG---FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE-EET---CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe-ecc---CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 45788999999999888877789999999987744332 211 22244 99999999999888766 7889988765
Q ss_pred ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE----eecCCCCe-E-EE
Q 017421 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR----ILAHTSDV-N-TV 275 (372)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~v-~-~~ 275 (372)
........... .....+.+++++|++..|+.+..++.|..||..++..... ..++...- . .+
T Consensus 205 ~~~~~~g~~~~------------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i 272 (409)
T 3hrp_A 205 WAPTRIGQLGS------------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL 272 (409)
T ss_dssp TCEEEEEECCT------------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE
T ss_pred ceeEEeeeccc------------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccE
Confidence 43211100000 0123567899999555555577788999999987754322 12222222 3 99
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccc----ccCC---------------CCCeeEEEeccCCCeEEEEeeeeEEEeeceE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLL----LTRS---------------INPCNKYLFNPCNKYLIIYLILVISIYSPNI 336 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~----~~~~---------------~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i 336 (372)
+|+|.++.++++-..++.|+.|+... +.+. -.....++++|+|+++++-.. .+.+|
T Consensus 273 a~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~-----~~~~I 347 (409)
T 3hrp_A 273 IYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF-----KGYCL 347 (409)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT-----TTCEE
T ss_pred EEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC-----CCCEE
Confidence 99933566667767788999998752 1111 234789999999985444310 14678
Q ss_pred EEeecccceEEEEEeee
Q 017421 337 LLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 337 ~lw~~~~~~~~~~~~~h 353 (372)
+.|+..+++ +..+.++
T Consensus 348 ~~~~~~~G~-v~~~~g~ 363 (409)
T 3hrp_A 348 RKLDILDGY-VSTVAGQ 363 (409)
T ss_dssp EEEETTTTE-EEEEEEC
T ss_pred EEEECCCCE-EEEEeCC
Confidence 888876665 3444443
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.26 E-value=9e-10 Score=96.96 Aligned_cols=193 Identities=13% Similarity=0.005 Sum_probs=123.8
Q ss_pred eCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeccc-CCcceEEEEECCCCCEEEE----
Q 017421 112 LPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVY---- 186 (372)
Q Consensus 112 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~---- 186 (372)
.+......+..+...+.+++++++|+++++...++.|.+|+.. +..........+ ....+..+.++|+|+++++
T Consensus 73 ~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 73 REDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp ETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSG
T ss_pred eCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCC
Confidence 3333334445566779999999999977766666789999986 432211111111 1124678999999998876
Q ss_pred EeC-------------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----
Q 017421 187 ASM-------------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----- 248 (372)
Q Consensus 187 ~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----- 248 (372)
|.. .+.|..||..+++..... .. ...+.++|+||++.|+.+...
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~---------------~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DL---------------DHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EE---------------SSEEEEEECTTSSEEEEEECCC---C
T ss_pred CccccccccccccccCCCeEEEEcCCCCcEEEEe---cC---------------CCCcceEEcCCCCEEEEEecCCcCCC
Confidence 332 256778887666653322 10 146789999999988776654
Q ss_pred -CeEEEEECCCCeEE--EEe-ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-----ccCCCCCeeEEEeccCCC
Q 017421 249 -DCIYVYDLEANKLS--LRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-----LTRSINPCNKYLFNPCNK 319 (372)
Q Consensus 249 -g~i~iwd~~~~~~~--~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~v~~~~~s~~g~ 319 (372)
+.|.+|++..+... ..+ ......+..++++ ++|++.++. .+ .|.+|+... +... ..+.+++|+|+++
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d-~~G~lwv~~-~~-gv~~~~~~g~~~~~~~~~-~~~~~~~f~~d~~ 289 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD-RGGWLWSSS-GT-GVCVFDSDGQLLGHIPTP-GTASNCTFDQAQQ 289 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC-TTSCEEECC-SS-EEEEECTTSCEEEEEECS-SCCCEEEECTTSC
T ss_pred CCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC-CCCCEEEec-CC-cEEEECCCCCEEEEEECC-CceeEEEEeCCCC
Confidence 68999998765411 111 1123445678898 899855444 44 499998751 1122 2588999999998
Q ss_pred eEEEEeee
Q 017421 320 YLIIYLIL 327 (372)
Q Consensus 320 ~l~~~~~~ 327 (372)
.|.+++..
T Consensus 290 ~L~it~~~ 297 (305)
T 3dr2_A 290 RLFITGGP 297 (305)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 88877533
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=1.2e-09 Score=96.18 Aligned_cols=205 Identities=15% Similarity=0.107 Sum_probs=131.1
Q ss_pred CCceEEEEECCCCCEEEE-------EeCCCcEEEEeCCCCeEEEEeee-cccCCcceEEEEECCC-CCEEEEEeCCCeEE
Q 017421 124 TSRAYVSQFSADGSLFVA-------GFQASQIRIYDVERGWKIQKDIL-AKSLRWTVTDTSLSPD-QRHLVYASMSPIVH 194 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~-------~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~ 194 (372)
-....+++|+++++++++ +..++.|.+|+..+++....... ..++...+.++.++++ ++++++ +..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEE
Confidence 345788999999998887 56778999999877754321110 0113346889999999 665554 4445799
Q ss_pred EEECCCCceeee-cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC---------------CeEEEEECCC
Q 017421 195 IVDVGSGTMESL-ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------------DCIYVYDLEA 258 (372)
Q Consensus 195 vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d---------------g~i~iwd~~~ 258 (372)
+||.. ++.... ..... + .....+..++++|+|+++++...+ +.|..||..
T Consensus 96 ~~d~~-g~~~~~~~~~~~---~---------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSE---G---------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEETT-SCEEECCSBCTT---S---------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEeCC-CCEEEEEeccCC---C---------ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 99998 664322 11100 0 112357899999999988877655 568888776
Q ss_pred CeEEEEeecCCCCeEEEEEe---CCCCCEE-EEEeCCCeEEEEecc-cc-----------cCCC-CCeeEEEeccCCCeE
Q 017421 259 NKLSLRILAHTSDVNTVCFG---DESGHLI-YSGSDDNLCKVNSVL-LL-----------TRSI-NPCNKYLFNPCNKYL 321 (372)
Q Consensus 259 ~~~~~~~~~~~~~v~~~~~s---p~~~~~l-~s~~~dg~i~vwd~~-~~-----------~~~~-~~v~~~~~s~~g~~l 321 (372)
++.... ..+......++|+ .++++.| ++...++.|.+||+. .. ..+. ..+..++++++|++.
T Consensus 162 g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 162 GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence 544332 2333456788887 1455454 444567899999965 11 1122 457889999999877
Q ss_pred EEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 322 IIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 322 ~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
++.. .++.|.+||..+++.+..+
T Consensus 241 v~~~------~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 241 VANW------GSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEEE------TTTEEEEECTTCBSCSEEE
T ss_pred EEEc------CCCEEEEEcCCCCcEeEEE
Confidence 7652 2456777777656554444
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=5.6e-09 Score=92.82 Aligned_cols=181 Identities=12% Similarity=0.017 Sum_probs=119.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc-cCCcceEEEEECCCCCEEEEEeC------CCeEEE
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASM------SPIVHI 195 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~------dg~i~v 195 (372)
....+.+++|+++|+++++. .+ .|.+||..++.......... .....+..+.++|+|+++++... .+.|..
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 35679999999999877754 44 49999988775432111111 11235889999999997765432 245666
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE-eCCCeEEEEECC--CC-e-----EEEEee
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLE--AN-K-----LSLRIL 266 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~-s~dg~i~iwd~~--~~-~-----~~~~~~ 266 (372)
++ +++...... +....+.++|+|+++.++.+ +.++.|.+||+. ++ . ....+.
T Consensus 166 ~~--~g~~~~~~~-----------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~ 226 (326)
T 2ghs_A 166 VA--KGKVTKLFA-----------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST 226 (326)
T ss_dssp EE--TTEEEEEEE-----------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT
T ss_pred Ee--CCcEEEeeC-----------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC
Confidence 66 444322111 11246789999999877544 457899999986 55 3 222233
Q ss_pred cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cccCCCCCeeEEEec-cCCCeEEEEe
Q 017421 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LLTRSINPCNKYLFN-PCNKYLIIYL 325 (372)
Q Consensus 267 ~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~~~~~s-~~g~~l~~~~ 325 (372)
.....+..+++. ++|++.++...++.|.+||.. .+......+++++|+ |+++.|++++
T Consensus 227 ~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 227 GIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TSSSEEEEEEEC-TTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 334567889998 889888777677899999974 122344568999998 8988776653
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.24 E-value=1.1e-09 Score=107.59 Aligned_cols=198 Identities=15% Similarity=0.146 Sum_probs=127.6
Q ss_pred CCCCceEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC-----
Q 017421 122 QTTSRAYVSQFSADGSLFVAGF-----QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----- 191 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----- 191 (372)
++...+..++|||||++||.+. ....|++||+.+++.+.... .. .....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KD--VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EE--EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CC--ceeccEEEe-CCCEEEEEEecCccccc
Confidence 3556789999999999988542 22579999999987554311 11 113578999 999999988774
Q ss_pred --------eEEEEECCCCceeeecceeecccccceeccCCCC-ccccEEEEEEcCCCCEEEEEeC----CCeEEEEECCC
Q 017421 192 --------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG-YSFGIFSLKFSTDGRELVAGSS----DDCIYVYDLEA 258 (372)
Q Consensus 192 --------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~sp~~~~l~s~s~----dg~i~iwd~~~ 258 (372)
.|++|++.++........... . |...+..+.|+|||++|+.... ...|+++|+.+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~------------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAI------------PAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCS------------GGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecC------------CCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 399999987653211111100 1 2234678999999998865432 24899999987
Q ss_pred Ce-EEEEeecCCCCeEEEEEeCCCCCEEEEEeCC---CeEEEEecccc--------cCCCCCeeEEEeccCCCeEEEEee
Q 017421 259 NK-LSLRILAHTSDVNTVCFGDESGHLIYSGSDD---NLCKVNSVLLL--------TRSINPCNKYLFNPCNKYLIIYLI 326 (372)
Q Consensus 259 ~~-~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d---g~i~vwd~~~~--------~~~~~~v~~~~~s~~g~~l~~~~~ 326 (372)
+. ....+..+....... |++..+.++++...+ +.|..+|+... ..+...+. .|+++++.|+....
T Consensus 269 ~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp TTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred CCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 63 445566666666555 552344444555443 57888988632 23444444 89999998876631
Q ss_pred eeEEEee--ceEEEeecccc
Q 017421 327 LVISIYS--PNILLDNYFLL 344 (372)
Q Consensus 327 ~~~~~~d--~~i~lw~~~~~ 344 (372)
-+ ..|++|+...+
T Consensus 346 -----~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 346 -----VDATARVEQFDYEGK 360 (693)
T ss_dssp -----ETTEEEEEEECTTSC
T ss_pred -----ECCeeEEEEEECCCC
Confidence 12 25777777643
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.23 E-value=1.5e-08 Score=88.27 Aligned_cols=180 Identities=12% Similarity=0.035 Sum_probs=129.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...+.+++++++|+++++...++.|.+|+.. +.... . ........+.++++.++++.+++...++.|..||.. ++.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-F-EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-E-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-E-ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 4678999999999988877778999999988 53332 1 122233468999999999987777668899999987 554
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEEeCCCC
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDESG 282 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp~~~ 282 (372)
... ... .....+..+++.++|+++++...++.|..||.. ++... .+......+.++++. +++
T Consensus 95 ~~~-~~~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d-~~g 157 (300)
T 2qc5_A 95 TEY-PLP--------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG-SDN 157 (300)
T ss_dssp EEE-ECS--------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred EEe-cCC--------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC-CCC
Confidence 211 110 011368899999999988887778899999988 55432 233345678999998 889
Q ss_pred CEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEE
Q 017421 283 HLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 283 ~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
+++++...++.|..||... .......+..++++++|++.++.
T Consensus 158 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 158 ALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp SEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEc
Confidence 8777666678899998741 11233567899999999766655
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.23 E-value=2.3e-09 Score=94.28 Aligned_cols=188 Identities=9% Similarity=0.003 Sum_probs=124.4
Q ss_pred CCccccCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEE
Q 017421 116 GPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (372)
Q Consensus 116 ~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 194 (372)
....+........+..|+|+++ +++++..++.|..|+.. +.. ... ......+..+.++++|+++++...++.|.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~---~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVL---LDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEE---EESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEE---eCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 3444455556778899999998 55677778899999984 432 221 12334588999999999777666668899
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE----EeC-------------CCeEEEEECC
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA----GSS-------------DDCIYVYDLE 257 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s----~s~-------------dg~i~iwd~~ 257 (372)
+|+.. ++......... + .....++.++++|+|+++++ |.. .+.|..||..
T Consensus 111 ~~~~~-g~~~~~~~~~~---~---------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYA---G---------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EECTT-SCEEEEECEET---T---------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EECCC-CCEEEEEeccC---C---------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 99986 55332221110 0 01125678999999998886 332 2568888887
Q ss_pred CCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC------CeEEEEeccccc---------CCCCCeeEEEeccCCCeEE
Q 017421 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD------NLCKVNSVLLLT---------RSINPCNKYLFNPCNKYLI 322 (372)
Q Consensus 258 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d------g~i~vwd~~~~~---------~~~~~v~~~~~s~~g~~l~ 322 (372)
+++..... .......++|+ ++++.|+.+... +.|.+|++.... .....+..++++++|++.+
T Consensus 178 ~g~~~~~~--~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 178 GSPLQRMA--DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp SCCCEEEE--EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE
T ss_pred CCcEEEEe--cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE
Confidence 66643332 33567889999 999988777665 689999975211 1123456789999998554
Q ss_pred EE
Q 017421 323 IY 324 (372)
Q Consensus 323 ~~ 324 (372)
+.
T Consensus 255 ~~ 256 (305)
T 3dr2_A 255 SS 256 (305)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.21 E-value=1.9e-08 Score=87.60 Aligned_cols=181 Identities=8% Similarity=-0.028 Sum_probs=128.2
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
....+.+++++++++++++...++.|.+||.. +... .. ........+.++++.++++++++...++.|..+|.. ++
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY-PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee-cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 34678999999999988877667889999987 5332 21 122223468999999999988877768899999987 55
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEEeCCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDES 281 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp~~ 281 (372)
..... .. .....+..+++.++++++++...++.|..||. +++... ....+...+..++++ ++
T Consensus 136 ~~~~~-~~--------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d-~~ 198 (300)
T 2qc5_A 136 IYEYD-LP--------------NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSG-ND 198 (300)
T ss_dssp EEEEE-CS--------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred EEEcc-CC--------------CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEEC-CC
Confidence 43211 10 01236889999999997777666789999998 554432 222344578899998 78
Q ss_pred CCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEE
Q 017421 282 GHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|+++++....+.|.+||... .......+.+++++++|++.++.
T Consensus 199 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred CCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 88777776678899998741 11234567899999999865554
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.21 E-value=2.2e-09 Score=106.35 Aligned_cols=195 Identities=14% Similarity=0.110 Sum_probs=125.2
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEeCCCCeEEEEe-eecccCCcceEEEEECCCCCEEEEEeCCC-
Q 017421 128 YVSQFSADGSLFVAGFQASQ--------------IRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSP- 191 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg~--------------i~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg- 191 (372)
..++|+|| +.|+.++.++. |++|++.++...... .....+...+..+.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57899999 99988876654 889998776421111 11223333478999999999998877543
Q ss_pred ----eEEEEECCCC--c-eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeEEEEECCCC-
Q 017421 192 ----IVHIVDVGSG--T-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEAN- 259 (372)
Q Consensus 192 ----~i~vwd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i~iwd~~~~- 259 (372)
.|++||+.++ . ...+.. +...+... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~-----------------~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIP-----------------DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEEC-----------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred CCcceEEEEECCCCCCcccEEecC-----------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 8999999876 3 222211 11123333 34889888877753 45999999874
Q ss_pred -eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-------cccC-CCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 260 -KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-------LLTR-SINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 260 -~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-------~~~~-~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
+....+..+...+..+.|+ ++.++++...|+..+||.+. .+.. ....+..+.++|+++.++......
T Consensus 353 ~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-- 428 (741)
T 1yr2_A 353 PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF-- 428 (741)
T ss_dssp CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEET--
T ss_pred cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCC--
Confidence 3434444455556677886 56788888889987777554 1111 345678899999998776442110
Q ss_pred EeeceEEEeecccce
Q 017421 331 IYSPNILLDNYFLLR 345 (372)
Q Consensus 331 ~~d~~i~lw~~~~~~ 345 (372)
.-.+++.+||+.+++
T Consensus 429 ~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 429 TQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEEETTTTE
T ss_pred CCCCEEEEEECCCCc
Confidence 013566666666554
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.17 E-value=2.2e-08 Score=88.99 Aligned_cols=195 Identities=11% Similarity=0.047 Sum_probs=124.8
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 017421 126 RAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (372)
Q Consensus 126 ~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (372)
-..+..|+|++. ++++...++.|.+|+..++.... . . ....+.++.|+|+++++++. . ..|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~---~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-H-A---LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E-E---CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E-E---CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 356789999754 55666678899999998874322 1 1 12368999999999877754 4 45999999888754
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEeecCCCCeEEEEEe
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRILAHTSDVNTVCFG 278 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 278 (372)
........ .....++.++++|+|+++++... .+.|..++ +++.. .+..+......++|+
T Consensus 123 ~~~~~~~~------------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s 187 (326)
T 2ghs_A 123 LHAELESD------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFS 187 (326)
T ss_dssp EEECSSTT------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEEC
T ss_pred EEeeCCCC------------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEc
Confidence 33211000 11236889999999997765542 24566666 45543 233333457789999
Q ss_pred CCCCCEEEEE-eCCCeEEEEecc--cc-c-----------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 279 DESGHLIYSG-SDDNLCKVNSVL--LL-T-----------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 279 p~~~~~l~s~-~~dg~i~vwd~~--~~-~-----------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
++++.|+.+ +.++.|.+||+. .. . .....+..++++++|.+.++... ++.|..|+. +
T Consensus 188 -~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~------~~~v~~~d~-~ 259 (326)
T 2ghs_A 188 -PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG------EGAVDRYDT-D 259 (326)
T ss_dssp -TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET------TTEEEEECT-T
T ss_pred -CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC------CCEEEEECC-C
Confidence 899876555 457899999975 22 1 11234577899999976665521 245666665 4
Q ss_pred ceEEEEE
Q 017421 344 LRTFYSF 350 (372)
Q Consensus 344 ~~~~~~~ 350 (372)
++.+..+
T Consensus 260 g~~~~~i 266 (326)
T 2ghs_A 260 GNHIARY 266 (326)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 4444433
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=7.8e-09 Score=92.57 Aligned_cols=203 Identities=10% Similarity=-0.023 Sum_probs=129.2
Q ss_pred CceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCeEEEEee----ecccCCcceEEEEECCCCCEEEEEeC-----CCeE
Q 017421 125 SRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPDQRHLVYASM-----SPIV 193 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i 193 (372)
..+..++++|+|+.+++... ++.+.||.+.++.. .... ....+-..+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57899999999999888642 34245555444532 2110 11123356899999999887666543 5789
Q ss_pred EEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEe---CCCeEEEEECCCCeEEEEeecCC
Q 017421 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGS---SDDCIYVYDLEANKLSLRILAHT 269 (372)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s---~dg~i~iwd~~~~~~~~~~~~~~ 269 (372)
.+||+.+++........... ..+...+..++++|++..+ ++.. .++.|.+||+.+++....+..|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred EEEECCCCeEEEEEECChhh----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 99999988754333221110 0122356889999865444 5554 57899999999887665553321
Q ss_pred -----------------------------CCeEEEEEeCCCCCEEEEEeCCC-eEEEEeccccc----------------
Q 017421 270 -----------------------------SDVNTVCFGDESGHLIYSGSDDN-LCKVNSVLLLT---------------- 303 (372)
Q Consensus 270 -----------------------------~~v~~~~~sp~~~~~l~s~~~dg-~i~vwd~~~~~---------------- 303 (372)
..+..++|+ ++++.|+++..++ .|..++...+.
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s-~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLD-AENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY 244 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEEC-TTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEec-cCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec
Confidence 235789999 8999888887665 55555533111
Q ss_pred CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 304 RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 304 ~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
++......++++++|.+.++.. .++.|.+||..+++
T Consensus 245 g~~g~pdgia~d~~G~l~va~~------~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 245 SEKPICDGISIDKDHNIYVGDL------AHSAIGVITSADRA 280 (343)
T ss_dssp EECCSCSCEEECTTCCEEEEEG------GGTEEEEEETTTTE
T ss_pred ccCCCCceEEECCCCCEEEEcc------CCCeEEEEECCCCC
Confidence 1233567899999998776653 24567777764443
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.1e-08 Score=93.94 Aligned_cols=182 Identities=9% Similarity=0.064 Sum_probs=119.1
Q ss_pred EEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEeeec-ccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 017421 130 SQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (372)
Q Consensus 130 ~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (372)
++|+|+++.|+++..++ .|.+|+...+......-.. ......+.+++++|++..|+++..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999998888766 7888988765432222111 11334578899999655666677788999999987753222
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEeecCC---------------C
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAHT---------------S 270 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------------~ 270 (372)
..... .+ . ....+...++|+|+ +.++++-..++.|+.|+.... ...+.++. .
T Consensus 256 ~~~~~--~g-----~---~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~ 323 (409)
T 3hrp_A 256 KQLEL--SG-----S---LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFA 323 (409)
T ss_dssp EECCC--CS-----C---CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCS
T ss_pred ecccc--cC-----C---CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeC
Confidence 11000 00 0 00011238999995 566666667889999998644 23333332 3
Q ss_pred CeEEEEEeCCCCCEEEEEe-CCCeEEEEeccc-----ccCC---------------CCCeeEEEeccCCCeEEEE
Q 017421 271 DVNTVCFGDESGHLIYSGS-DDNLCKVNSVLL-----LTRS---------------INPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~-----~~~~---------------~~~v~~~~~s~~g~~l~~~ 324 (372)
....++++ ++|+++++-. .++.|+.|++.. +.++ -.....++++++|.++++-
T Consensus 324 ~P~gia~d-~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 324 QPNGMTVD-EDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp SEEEEEEC-TTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred CCeEEEEe-CCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 57899999 8999777777 789999999541 1111 2457889999997665554
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.12 E-value=3.8e-09 Score=96.58 Aligned_cols=216 Identities=16% Similarity=0.127 Sum_probs=138.8
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeec-ccC---CcceEEEEECCCCCEEEEEeC--CCe
Q 017421 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILA-KSL---RWTVTDTSLSPDQRHLVYASM--SPI 192 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~-~~~---~~~v~~~~~~~~~~~l~~~~~--dg~ 192 (372)
.++++|||++++++. .++.|.++|..+.+.+...... ... ......+.|+||+++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999887775 3678999999998776654432 110 123567899999999999874 578
Q ss_pred EEEEECCCCceeeecceeec----ccc----cceeccC-------CCCccc------------c-EEEEEEcCCCCEEEE
Q 017421 193 VHIVDVGSGTMESLANVTEI----HDG----LDFSAAD-------DGGYSF------------G-IFSLKFSTDGRELVA 244 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~----~~~----~~~~~~~-------~~~h~~------------~-i~~~~~sp~~~~l~s 244 (372)
|.+.|+.+++.......... ..+ +.+.++. ..++-. + ...+.|.+++..++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 99999999887554433110 000 0111110 000000 0 012345777777766
Q ss_pred EeCCCeEEEEECCCCeEE--EEeec----------CCCCeEEEEEeCCCCCEEEEEeC----------CCeEEEEecccc
Q 017421 245 GSSDDCIYVYDLEANKLS--LRILA----------HTSDVNTVCFGDESGHLIYSGSD----------DNLCKVNSVLLL 302 (372)
Q Consensus 245 ~s~dg~i~iwd~~~~~~~--~~~~~----------~~~~v~~~~~sp~~~~~l~s~~~----------dg~i~vwd~~~~ 302 (372)
.+..+.|.+.|+...... ..+.- .......++++ ++++.+++... ++.|.++|+.+.
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s-~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~ 360 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH-RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG 360 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE-GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc-CCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence 677788888888654321 11110 01122236889 78777666542 357999999865
Q ss_pred c-----CCCCCeeEEEeccCCC-eEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 303 T-----RSINPCNKYLFNPCNK-YLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 303 ~-----~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+ ........+.|+|||+ +++++. ..++.|.++|..+++.+...
T Consensus 361 kvv~~I~vg~~P~gia~spDg~~~lyv~n-----~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 361 ERINKIELGHEIDSINVSQDAEPLLYALS-----AGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CEEEEEEEEEEECEEEECCSSSCEEEEEE-----TTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEEECCCCcCeEEEccCCCEEEEEEc-----CCCCeEEEEECCCCCEEEEe
Confidence 4 1223578999999999 777774 12799999999999999886
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=5.3e-11 Score=107.87 Aligned_cols=186 Identities=9% Similarity=-0.079 Sum_probs=97.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeeccc
Q 017421 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (372)
Q Consensus 135 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (372)
++..+++++.||.|+.||..+++.+..... ..+.+..+..++..+++++.||.|+.||..+++...........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~- 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE- 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc-
Confidence 577899999999999999999977765433 23444455567778888889999999999888764333211000
Q ss_pred ccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeE
Q 017421 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLC 294 (372)
Q Consensus 215 ~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i 294 (372)
. . ...++ +. ++..+++++.++.|..||.++|+.+..+..+. ...++ |++..+++++.|+.|
T Consensus 82 ~-~--------~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~-p~~~~v~~~~~dg~v 142 (369)
T 2hz6_A 82 L-V--------QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLS-PSTSLLYLGRTEYTI 142 (369)
T ss_dssp H-H--------TTCSC----C------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEE
T ss_pred c-c--------ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----ccccc-ccCCEEEEEecCCEE
Confidence 0 0 00011 11 34467778889999999999999887776543 24556 578889999999999
Q ss_pred EEEecccccCCC----CCeeEEEeccCC---CeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 295 KVNSVLLLTRSI----NPCNKYLFNPCN---KYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 295 ~vwd~~~~~~~~----~~v~~~~~s~~g---~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
+.||.++.+..- .......++++. ..+++++ .|+.+..||..+|+.+..+.
T Consensus 143 ~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~------~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 143 TMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSN------GDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEE------TSCEEEEECTTTCCEEEEEE
T ss_pred EEEECCCCCEEEeEecccccCccccCCccccceEEEEC------CCCEEEEEECCCCcEEEEec
Confidence 999987543110 011223333331 3344332 46778888888888777654
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=2.3e-08 Score=89.50 Aligned_cols=203 Identities=8% Similarity=0.066 Sum_probs=127.4
Q ss_pred CCCCceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEeeecc---cCCcceEEEEECCCCCEE-EEEe---C
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILAK---SLRWTVTDTSLSPDQRHL-VYAS---M 189 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l-~~~~---~ 189 (372)
.+...+.+++++++++++++-.. +..|.+||+.+++.+....... .+...+..+++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999987776543 5789999999886554432211 122346889999865555 4444 5
Q ss_pred CCeEEEEECCCCceeeecce--eecccccceeccC-------CCC----ccccEEEEEEcCCCCEEEEEeCCC-eEEEEE
Q 017421 190 SPIVHIVDVGSGTMESLANV--TEIHDGLDFSAAD-------DGG----YSFGIFSLKFSTDGRELVAGSSDD-CIYVYD 255 (372)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~----h~~~i~~~~~sp~~~~l~s~s~dg-~i~iwd 255 (372)
++.|.+||+.+++....... ........+.... ..+ ....++.|+|+|+|+.|+.+...+ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999988775443211 0000001111110 000 012468899999999888877665 555555
Q ss_pred CC---CCe-----EE--EEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEec-c-cc---c--CCCCCeeEEEeccCC
Q 017421 256 LE---ANK-----LS--LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSV-L-LL---T--RSINPCNKYLFNPCN 318 (372)
Q Consensus 256 ~~---~~~-----~~--~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~-~-~~---~--~~~~~v~~~~~s~~g 318 (372)
.. .+. .. ....++......++++ ++|+++++...++.|.+||. . .+ . .....+.+++|.++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d-~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISID-KDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEEC-TTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEEC-CCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 32 110 00 0112344456789999 88999998888999999998 3 11 1 124467899999998
Q ss_pred CeEEEEe
Q 017421 319 KYLIIYL 325 (372)
Q Consensus 319 ~~l~~~~ 325 (372)
+++++..
T Consensus 303 ~l~v~~~ 309 (343)
T 2qe8_A 303 YLYFDCN 309 (343)
T ss_dssp CEEEEEC
T ss_pred cEEEEeC
Confidence 8776663
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=7.3e-08 Score=86.61 Aligned_cols=152 Identities=13% Similarity=0.004 Sum_probs=103.5
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------CCCeEEE
Q 017421 131 QFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHI 195 (372)
Q Consensus 131 ~~s~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~v 195 (372)
...|+++.+.+... ++.|.++|..+.+.+........ + . +.++||+++++++. .++.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~---P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL---P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS---C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC---C-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 34688888877755 57999999999877665433222 3 4 99999999988775 3578999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCeE
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVN 273 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~ 273 (372)
||..+.+............. ........+.|+|||++++++.. ++.|.++|+.+++.+.++.... +
T Consensus 114 iD~~t~~v~~~I~v~~g~r~---------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~- 181 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRF---------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C- 181 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCC---------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-
T ss_pred EECCCCeEEEEEECCCcccc---------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-
Confidence 99999887554432210000 00113456899999999887764 6899999999999988886422 1
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 274 TVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
...+ |...+.+++.+.||++.+.++.
T Consensus 182 ~~~~-P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 182 YHIF-PTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp EEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred ceee-cCCCceeEEECCCCCEEEEECC
Confidence 1222 3445566666677777776664
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=1.5e-07 Score=84.65 Aligned_cols=204 Identities=11% Similarity=0.103 Sum_probs=129.6
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeecccC----CcceEEEEECCCCCEEEEEeC--CCe
Q 017421 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKSL----RWTVTDTSLSPDQRHLVYASM--SPI 192 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~--dg~ 192 (372)
.++++|||+++.++. .++.|.+||..+.+.+.......+. ......+.|+|||++++++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 3578999999998776664432211 124667999999999998864 689
Q ss_pred EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeecC---
Q 017421 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-NKLSLRILAH--- 268 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~--- 268 (372)
|.++|+.+++......... . ...+....+.+++.+.||.+.+.++.+ ++.......+
T Consensus 162 VsVID~~t~~vv~tI~v~g------------------~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~ 222 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD------------------C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP 222 (386)
T ss_dssp EEEEETTTTEEEEEEECCS------------------E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC
T ss_pred EEEEECCCCcEEEEEECCC------------------c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc
Confidence 9999999998755443211 1 112222345666777788888888765 4443222111
Q ss_pred -CCCeE-EEEEeCCCCCEEEEEeCCCeEEEEeccccc-----C-------------CCCCeeEEEeccCCCeEEEEeeee
Q 017421 269 -TSDVN-TVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----R-------------SINPCNKYLFNPCNKYLIIYLILV 328 (372)
Q Consensus 269 -~~~v~-~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~-------------~~~~v~~~~~s~~g~~l~~~~~~~ 328 (372)
..++. ...|.+++|++++ .+.+|.|.+.|+.... . .......++++|+++.+++.....
T Consensus 223 ~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 223 EDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp TTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred ccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 12222 2466557786655 5568999999985221 0 012334578899999888874210
Q ss_pred EE----EeeceEEEeecccceEEEEEee
Q 017421 329 IS----IYSPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 329 ~~----~~d~~i~lw~~~~~~~~~~~~~ 352 (372)
-. --.++|.+.|..+++.++.+..
T Consensus 302 ~~~~hk~~~~~V~viD~~t~kv~~~i~v 329 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKTGERLAKFEM 329 (386)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEEC
Confidence 00 0024677889999988887644
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.97 E-value=3.8e-07 Score=82.44 Aligned_cols=120 Identities=11% Similarity=-0.019 Sum_probs=80.5
Q ss_pred ECCCCCEEEEEeC--CC---cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------CCCeEEEE
Q 017421 132 FSADGSLFVAGFQ--AS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIV 196 (372)
Q Consensus 132 ~s~~~~~l~~~~~--dg---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~vw 196 (372)
..|+++++.+... .. .|.+||..+++.+..... + . .. .+.++||+++++++. .++.|.+|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g-~-~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--G-F-LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--C-C-CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 3467776665543 22 789999998876544221 2 2 23 899999999999886 36789999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEE-ee
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLR-IL 266 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~ 266 (372)
|..+.+............ + .+......+.|+|||++|+++.. ++.|.++| .+++.+.. +.
T Consensus 103 D~~t~~~~~~i~~~~~~~---~------~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPR---F------DVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred ECCCCcEEEEEECCCccc---c------ccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 998877644333210000 0 00013457899999999998774 47899999 99988777 54
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.96 E-value=6.8e-08 Score=94.86 Aligned_cols=194 Identities=8% Similarity=-0.014 Sum_probs=119.3
Q ss_pred EEEEECCCCCEEEEEeCCC-------------cEEEEeCCCCeEEEEee-eccc-CCcceEEEEECCCCCEEEEEeC---
Q 017421 128 YVSQFSADGSLFVAGFQAS-------------QIRIYDVERGWKIQKDI-LAKS-LRWTVTDTSLSPDQRHLVYASM--- 189 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg-------------~i~vwd~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~--- 189 (372)
..++|+ |++.|+.++.+. .|++|++.++....... .... +...+.++.|+||+++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 567899 999999888774 39999988764211111 1222 3344678999999998865443
Q ss_pred -CCeEEEEECCCCc--eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-C---CeEEEEECCCCeE-
Q 017421 190 -SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D---DCIYVYDLEANKL- 261 (372)
Q Consensus 190 -dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-d---g~i~iwd~~~~~~- 261 (372)
...|+++|+.++. ...+.. +....... |+++|..|+..+. + +.|.++|+.++..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~-----------------~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~ 318 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQG-----------------DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA 318 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEEC-----------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG
T ss_pred CCcEEEEEECCCCCCceEEEeC-----------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 3589999998763 222111 11123333 5666666654443 3 6799999987654
Q ss_pred -EEEeecCCCCeEEEEEeCCCCCEEEEEeC-CC--eEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 262 -SLRILAHTSDVNTVCFGDESGHLIYSGSD-DN--LCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 262 -~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-dg--~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
...+..|...+. .|+ ++++.|+.... ++ .|++||+.... .....+..+.++|++..++.......
T Consensus 319 ~~~~l~~~~~~~~--~~s-~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~-- 393 (693)
T 3iuj_A 319 HWRDLIPERQQVL--TVH-SGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYA-- 393 (693)
T ss_dssp GCEEEECCCSSCE--EEE-EETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSS--
T ss_pred ccEEEecCCCCEE--EEE-EECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCC--
Confidence 245555666665 888 77777766654 44 68888875211 23345677788888887765521100
Q ss_pred eeceEEEeecccce
Q 017421 332 YSPNILLDNYFLLR 345 (372)
Q Consensus 332 ~d~~i~lw~~~~~~ 345 (372)
-.+++..||+.+++
T Consensus 394 tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 394 QPPTLYRFEPKSGA 407 (693)
T ss_dssp SCCEEEEECTTTCC
T ss_pred CCCEEEEEECCCCe
Confidence 11455666655443
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.94 E-value=1.1e-07 Score=86.24 Aligned_cols=189 Identities=13% Similarity=0.006 Sum_probs=125.1
Q ss_pred CCCCEEEE-EeCCCcEEEEeCCCC---eEEEEeee----c-ccCCcceEEEEECCCCCEEEEEeCC------CeEEEEEC
Q 017421 134 ADGSLFVA-GFQASQIRIYDVERG---WKIQKDIL----A-KSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDV 198 (372)
Q Consensus 134 ~~~~~l~~-~~~dg~i~vwd~~~~---~~~~~~~~----~-~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~ 198 (372)
+++++|++ +..++.|.|+|+.+. ..+.+.+. . +........+...|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 78887755 566789999998754 12222221 0 1111246778889999 66665554 78999999
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-------------------CCCeEEEEECCCC
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------------------SDDCIYVYDLEAN 259 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-------------------~dg~i~iwd~~~~ 259 (372)
++.+.+.......... .-...+.|+|+++.+++.. .+.+|.+||+.++
T Consensus 172 ~T~~v~~~~~~~~~~~-------------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQ-------------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp TTCCEEEECCSBCTTC-------------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCeEEEEEccCCCCc-------------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 9998766554322111 1234678899999888874 3688999999999
Q ss_pred eEEEEeecC-C-CCeEEEEE--eCCCCCEEEEEe------CCCeEEEEec-------------cccc--C----------
Q 017421 260 KLSLRILAH-T-SDVNTVCF--GDESGHLIYSGS------DDNLCKVNSV-------------LLLT--R---------- 304 (372)
Q Consensus 260 ~~~~~~~~~-~-~~v~~~~~--sp~~~~~l~s~~------~dg~i~vwd~-------------~~~~--~---------- 304 (372)
+.+.++... . .....+.| + |+++++++++ .+++|.+|.. .+.. .
T Consensus 239 k~~~tI~vg~~g~~P~~i~f~~~-Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 239 KRIHSLTLGEENRMALELRPLHD-PTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp EEEEEEESCTTEEEEEEEEECSS-TTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred cEeeEEecCCCCCccceeEeeEC-CCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 888887742 1 23455656 8 8898888776 4567765432 2211 0
Q ss_pred -CCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421 305 -SINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYF 342 (372)
Q Consensus 305 -~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~ 342 (372)
....+..+.++|||++|.++.. -.+.|.++|+.
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnr-----g~d~VavfdV~ 351 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLW-----GIGEVRQYDIS 351 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEET-----TTTEEEEEECS
T ss_pred cCCCceeEEEECCCCCEEEEEeC-----CCCEEEEEEec
Confidence 0245788999999999998842 14667777764
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=3.2e-07 Score=83.27 Aligned_cols=184 Identities=10% Similarity=0.012 Sum_probs=122.2
Q ss_pred ceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-----------
Q 017421 126 RAYVSQFSADGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------- 188 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------- 188 (372)
....+...|+| .++++..+ |.|.++|..+.+.+...........--..+.|+|+++.++++.
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 45567889999 66665444 6899999998876665432222222234588899999888874
Q ss_pred --------CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE--cCCCCEEEEEe------CCCeEE
Q 017421 189 --------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGRELVAGS------SDDCIY 252 (372)
Q Consensus 189 --------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--sp~~~~l~s~s------~dg~i~ 252 (372)
....|.+||+.+++......... .......+.| +|+++++.++. .+++|.
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~--------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~ 283 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE--------------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIW 283 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCT--------------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCC--------------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEE
Confidence 36899999999876544333210 0113445655 99999887766 456788
Q ss_pred EEECCCCe--EEEEe--ecC----------------CCCeEEEEEeCCCCCEEEEEeC-CCeEEEEeccc---cc-----
Q 017421 253 VYDLEANK--LSLRI--LAH----------------TSDVNTVCFGDESGHLIYSGSD-DNLCKVNSVLL---LT----- 303 (372)
Q Consensus 253 iwd~~~~~--~~~~~--~~~----------------~~~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~~~---~~----- 303 (372)
+|..+.++ ....+ ... ...+..+.++ +||++|+++.. .+.|.+||+.. .+
T Consensus 284 v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS-~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 284 LWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS-LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp EEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC-TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 77665443 11211 110 2456789999 99999888774 68999999841 11
Q ss_pred --C-C------------CCCeeEEEeccCCCeEEEEe
Q 017421 304 --R-S------------INPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 304 --~-~------------~~~v~~~~~s~~g~~l~~~~ 325 (372)
+ . ......++++|||++|+++.
T Consensus 363 ~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 363 KLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1 0 01368899999999999884
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=5.8e-07 Score=76.54 Aligned_cols=176 Identities=15% Similarity=0.071 Sum_probs=117.8
Q ss_pred ceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCc
Q 017421 126 RAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGT 202 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 202 (372)
...++.|++++.++++.+. ++.|.++|+.+++.+..... ..+. ....+++. ++.|..+ -.++.+.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-DDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-CCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 3689999998765555543 57999999999977665432 2221 12345554 4455544 458899999999887
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC-----CCeEEEEE
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCF 277 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~ 277 (372)
........ ... ...+++||+.++++..++.|.++|..+.+.+..+.-.. ..++.+.|
T Consensus 98 v~~~i~~g-~~~-----------------g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 98 NIKNFTHQ-MKD-----------------GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp EEEEEECC-SSS-----------------CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEEEECC-CCC-----------------eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 65543321 011 12345678777777778899999999988877776321 24678888
Q ss_pred eCCCCCEEEEEeCCCeEEEEeccccc--------C-----------CCCCeeEEEeccCCCeEEEEe
Q 017421 278 GDESGHLIYSGSDDNLCKVNSVLLLT--------R-----------SINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 278 sp~~~~~l~s~~~dg~i~vwd~~~~~--------~-----------~~~~v~~~~~s~~g~~l~~~~ 325 (372)
. +|.+++....++.|.+.|+.+.+ + .......++|+|+++.++++.
T Consensus 160 ~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 160 I--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp E--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred E--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 7 56655555567899999987433 0 012458999999998777663
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.87 E-value=6.8e-08 Score=86.79 Aligned_cols=211 Identities=10% Similarity=-0.044 Sum_probs=129.1
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeecccC----CcceEEEEECCCCCEEEEEeC--CCe
Q 017421 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKSL----RWTVTDTSLSPDQRHLVYASM--SPI 192 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~--dg~ 192 (372)
.+.++||++++.++. .++.|.+||+.+++.+.......+. ......+.++|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888875 3678999999999777665432111 123668999999999998875 457
Q ss_pred EEE--EECCCCceeeecceeec----ccc----cceecc-------CCC-----Cc------------cccEEEEEEcCC
Q 017421 193 VHI--VDVGSGTMESLANVTEI----HDG----LDFSAA-------DDG-----GY------------SFGIFSLKFSTD 238 (372)
Q Consensus 193 i~v--wd~~~~~~~~~~~~~~~----~~~----~~~~~~-------~~~-----~h------------~~~i~~~~~sp~ 238 (372)
+.+ +|+.+ .. ....... ..+ ..+.++ ... ++ ..+. . .++
T Consensus 149 v~V~~iD~~t--v~-~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~ 221 (368)
T 1mda_H 149 AGLSVPGASD--DQ-LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANY 221 (368)
T ss_dssp EEEEETTTEE--EE-EEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETT
T ss_pred EEEEEEchhh--ce-EEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-ccc
Confidence 888 88866 11 1111000 000 000000 000 00 0111 2 455
Q ss_pred CCEEEEEeCCCeEEEEECCCCe--EEEEeec-------C---CCCeEEEEEeCCCCCEEEEEeC---------CCeEEEE
Q 017421 239 GRELVAGSSDDCIYVYDLEANK--LSLRILA-------H---TSDVNTVCFGDESGHLIYSGSD---------DNLCKVN 297 (372)
Q Consensus 239 ~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~-------~---~~~v~~~~~sp~~~~~l~s~~~---------dg~i~vw 297 (372)
+..++..+. +.|.+.|+.+.. .+..+.. + ......++++ ++++.++++.. ++.+.++
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s-~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL-KNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE-TTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc-CCCCEEEEEeccccCcccccCCCEEEE
Confidence 555555555 888888986542 2222211 0 1111226899 88887776533 2356699
Q ss_pred eccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEe-eceEEEeecccceEEEEEeee
Q 017421 298 SVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIY-SPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 298 d~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~~~~~h 353 (372)
|+.+.+ ........++|+|||+.++.+. -+ +++|.++|..+++.+....+.
T Consensus 300 D~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~-----~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 300 TASVGQTSGPISNGHDSDAIIAAQDGASDNYAN-----SAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp ESSSCCEEECCEEEEEECEEEECCSSSCEEEEE-----ETTTTEEEEEESSSCEEEEECCCC
T ss_pred ECCCCeEEEEEECCCCcceEEECCCCCEEEEEc-----cCCCCeEEEEECCCCcEEEEEECC
Confidence 997654 1123578999999998766553 12 799999999999999887654
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.85 E-value=2.5e-06 Score=77.90 Aligned_cols=205 Identities=10% Similarity=-0.060 Sum_probs=125.2
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------CCCeEEEEEC
Q 017421 134 ADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDV 198 (372)
Q Consensus 134 ~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~vwd~ 198 (372)
++++.+.+.... +.|.++|+.+.+.+....... . . .+.++||+++++++. .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~---~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF---L-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS---S-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC---C-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 466665555442 699999999997776644322 2 3 899999999988876 3678999999
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCC------
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTS------ 270 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~------ 270 (372)
.+.+......+..... + ........+.|+|||++++++.. ++.|.+.|+.+++.+.++.....
T Consensus 157 ~t~~vv~~I~v~g~~r---~------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~ 227 (426)
T 3c75_H 157 VTFLPIADIELPDAPR---F------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPA 227 (426)
T ss_dssp TTCCEEEEEEETTCCC---C------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred CCCcEEEEEECCCccc---c------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccC
Confidence 9988755443220000 0 00012346789999999988764 57899999999988777653110
Q ss_pred -CeEEEEEeCCCC-------------------------------------CEEEEEeCCCeEEEEeccccc----C----
Q 017421 271 -DVNTVCFGDESG-------------------------------------HLIYSGSDDNLCKVNSVLLLT----R---- 304 (372)
Q Consensus 271 -~v~~~~~sp~~~-------------------------------------~~l~s~~~dg~i~vwd~~~~~----~---- 304 (372)
.-.-+.++ ++| ..++..+..+.+.+.|+.... .
T Consensus 228 g~~~~v~~~-~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 228 SPTVFYMNC-RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp ETTEEEEEE-TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEES
T ss_pred CCcEEEEEc-CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeee
Confidence 00112333 333 333333444556666653100 0
Q ss_pred ----------CCCCeeEEEeccCCCeEEEEeeeeE----EEeeceEEEeecccceEEEEEeee
Q 017421 305 ----------SINPCNKYLFNPCNKYLIIYLILVI----SIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 305 ----------~~~~v~~~~~s~~g~~l~~~~~~~~----~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.......++++|+++.+++...... +..++.|.+.|..+++.+..+.+-
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg 369 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG 369 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC
Confidence 0011223788999888877642100 001357889999999988877543
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=3.3e-07 Score=86.03 Aligned_cols=192 Identities=10% Similarity=-0.041 Sum_probs=131.2
Q ss_pred CCCEEEEEeC-CCcEEEEeCCCCeEEEEeeecccCCcceEEEEE-C-CCCCEEEEEeC------------------CCeE
Q 017421 135 DGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL-S-PDQRHLVYASM------------------SPIV 193 (372)
Q Consensus 135 ~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~~------------------dg~i 193 (372)
||+++.+... +..|.+.|+.+.+...... ... ...+..+++ + |+++++++++. ++.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILE-IPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEE-CSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEe-CCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 7888776654 5579999999986655332 222 224788887 5 99999988852 4579
Q ss_pred EEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC------------------------
Q 017421 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD------------------------ 249 (372)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg------------------------ 249 (372)
.+.|..+.+.......... ...++++|+|+++++.+.+.
T Consensus 178 tvID~~t~~v~~qI~Vgg~-----------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~ 240 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGN-----------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE 240 (595)
T ss_dssp EEEETTTTEEEEEEEESSC-----------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred EEEECCCCeEEEEEEeCCC-----------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccc
Confidence 9999998776544443221 23356677777776666432
Q ss_pred --------------eEEEEECCC--CeE-EEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccccc--------
Q 017421 250 --------------CIYVYDLEA--NKL-SLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLLT-------- 303 (372)
Q Consensus 250 --------------~i~iwd~~~--~~~-~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~-------- 303 (372)
.|.+.|.++ ++. +..+.. .....++.++ |||+++++++ .+..|.++|+.+.+
T Consensus 241 ~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~s-PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 241 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp HHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC
T ss_pred eeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEc-CCCCEEEEeCCCCCeEEEEECcccccccccccC
Confidence 377778877 444 445543 2355789999 9999877665 67899999998541
Q ss_pred ---------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc----------ceEEEEEeee
Q 017421 304 ---------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL----------LRTFYSFMVH 353 (372)
Q Consensus 304 ---------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~----------~~~~~~~~~h 353 (372)
........++|+|+| ++.+.. .-|++|..||+.. .+.+....+|
T Consensus 319 ~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~-----~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 319 PRSAVVAEPELGLGPLHTAFDGRG-NAYTSL-----FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp GGGGEEECCBCCSCEEEEEECTTS-EEEEEE-----TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred cccceEEEcCCCCCcceEEECCCC-eEEEEE-----ecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 223467899999999 666552 2489999999988 5566665544
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=6.9e-07 Score=75.27 Aligned_cols=173 Identities=13% Similarity=0.076 Sum_probs=115.9
Q ss_pred eEEEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCce
Q 017421 127 AYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTM 203 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 203 (372)
..++.|+ ++.++.+.+.+| .|+++|+.+++.+....... ........++++.|.... .++.+.+||.++.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK----RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC----ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 5788998 677777777766 89999999997776644322 233322333455555554 588999999999887
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC--C---CCeEEEEEe
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH--T---SDVNTVCFG 278 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~~~~s 278 (372)
........ + ...+.+|++.|+.+..++.|.++|..+.+.+.++... . ..++.+.|.
T Consensus 120 ~~ti~~~~--e-----------------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 120 VRSFNYDG--E-----------------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEEEECSS--C-----------------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECCC--C-----------------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 65544311 1 1223356777777666788999999999888777632 2 334567886
Q ss_pred CCCCCEEEEEeCCCeEEEEeccccc-----------C-------CCCCeeEEEeccCCCeEEEEe
Q 017421 279 DESGHLIYSGSDDNLCKVNSVLLLT-----------R-------SINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 279 p~~~~~l~s~~~dg~i~vwd~~~~~-----------~-------~~~~v~~~~~s~~g~~l~~~~ 325 (372)
+|++.+..-.++.|.+.|.++.+ . ...-.+.++|+|+++.|.+..
T Consensus 181 --~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 181 --DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp --TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred --CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 67666655568889998886322 1 123458899999987776654
No 230
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.78 E-value=9.4e-06 Score=68.64 Aligned_cols=195 Identities=12% Similarity=0.125 Sum_probs=124.6
Q ss_pred ccCCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 017421 120 VDQTTSRAYVSQFSADGSL-FVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (372)
Q Consensus 120 ~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 198 (372)
+.+....+.+++|+|+++. +++...++.|...|+. +..+.... ..+. ...-.+++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-LDFV-KDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-CSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-cCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3455678999999997664 4557778889999987 65554432 2222 35788999988877666556788999988
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCeEEEEee-------cC
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE---ANKLSLRIL-------AH 268 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~---~~~~~~~~~-------~~ 268 (372)
.............. .+. ..........++|+|.++.|.++.......+|.++ ....+..+. .+
T Consensus 99 ~~~~~i~~~~~~~~--~~~-----~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 99 TPNSEVKILKKIKI--PLQ-----ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp CTTCCEEEEEEEEC--CCS-----SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred CCCCeeeeeeeecc--ccc-----cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 76543111111110 000 00123467899999998777766665444444443 111122221 13
Q ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-------ccc-------CCCCCeeEEEeccCCCeEEEE
Q 017421 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-------LLT-------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-------~~~-------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
...+.+++++|..+++++.......|.++|.. .+. ........++|.++|+..+++
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 34678999998888888888788888888875 111 112466899999999876666
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=1.8e-06 Score=72.75 Aligned_cols=172 Identities=9% Similarity=-0.018 Sum_probs=115.4
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 017421 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (372)
..++.|+ ++.++++.+.+|.|+++|+.+++.+... . ... ..-..+++.. ++..+..-.++.+.+||.++.+....
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4788887 4666778888899999999999777665 2 221 1112355542 23444445689999999999887655
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec--CC---CCeEEEEEeCCC
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA--HT---SDVNTVCFGDES 281 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~---~~v~~~~~sp~~ 281 (372)
.... .+ -..++ +|++.|+.+..++.|.++|..+.+.+.++.. +. ..++.+.|. +
T Consensus 132 i~~~--~e---------------GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--d 190 (268)
T 3nok_A 132 TRYS--GE---------------GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--N 190 (268)
T ss_dssp EECS--SC---------------CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--T
T ss_pred EeCC--Cc---------------eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--C
Confidence 4431 11 12233 5678888777789999999999988877763 22 245677886 7
Q ss_pred CCEEEEEeCCCeEEEEeccccc-------------------CCCCCeeEEEeccCCCeEEEE
Q 017421 282 GHLIYSGSDDNLCKVNSVLLLT-------------------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~~~~-------------------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|++.+..-.++.|.+.|.++.+ ....-.+.++|+|+++.|++.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 7666555567889998886322 112356889999987766654
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.68 E-value=2.9e-05 Score=66.39 Aligned_cols=199 Identities=7% Similarity=-0.045 Sum_probs=121.7
Q ss_pred CceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCc
Q 017421 125 SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGT 202 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 202 (372)
..+.+++|++++..|. +-...+.|.++++...... .. .......+..++++|++..|+.+ ...+.|.++++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~--~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TI--IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EE--ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-EE--EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 3567899999766555 4455689999998765322 11 11112357899999976665555 456789999987543
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeEEEEee-cCCCCeEEEEEe
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANKLSLRIL-AHTSDVNTVCFG 278 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s 278 (372)
...... . .......++++|++..|..+.. .+.|..+++.... ...+. ........++++
T Consensus 113 ~~~~~~--~--------------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 113 RRVLFD--T--------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp CEEEEC--S--------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEE
T ss_pred EEEEEE--C--------------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEc
Confidence 221111 0 0125688999997665554443 3688888886432 22222 233467899999
Q ss_pred CCCCCEEEEE-eCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421 279 DESGHLIYSG-SDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 279 p~~~~~l~s~-~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~ 351 (372)
+++..|+.+ ...+.|.++|+.... ........++.. +..|+.+.. ..+.|..+|..+++.+..+.
T Consensus 176 -~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~-----~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 176 -AFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDW-----KTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp -TTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEET-----TTTEEEEEETTTTEEEEEEC
T ss_pred -CCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEEC-----CCCeEEEEeCCCCCceEEEc
Confidence 766655544 456889999986211 112233455543 445554420 23678888888888776654
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.68 E-value=5.7e-07 Score=84.44 Aligned_cols=179 Identities=9% Similarity=0.017 Sum_probs=117.1
Q ss_pred CCceEEEEE-C-CCCCEEEEEe------------------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCE
Q 017421 124 TSRAYVSQF-S-ADGSLFVAGF------------------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRH 183 (372)
Q Consensus 124 ~~~v~~~~~-s-~~~~~l~~~~------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 183 (372)
...+..+++ + |+++++++++ .++.+.++|..+.+...+.... + ....++++|+|++
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg-g---~pd~~~~spdGk~ 208 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS-G---NLDNCDADYEGKW 208 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES-S---CCCCEEECSSSSE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC-C---CccceEECCCCCE
Confidence 345788888 5 9999998884 3457999999988665554332 2 3566889999999
Q ss_pred EEEEeCCC--------------------------------------eEEEEECCC--Cce-eeecceeecccccceeccC
Q 017421 184 LVYASMSP--------------------------------------IVHIVDVGS--GTM-ESLANVTEIHDGLDFSAAD 222 (372)
Q Consensus 184 l~~~~~dg--------------------------------------~i~vwd~~~--~~~-~~~~~~~~~~~~~~~~~~~ 222 (372)
+++.+.+. .|.|.|..+ ++. ......
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv------------- 275 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI------------- 275 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-------------
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-------------
Confidence 99888653 234444443 111 001100
Q ss_pred CCCccccEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCe------------EEEEeecCCCCeEEEEEeCCCCCEEEEEe
Q 017421 223 DGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANK------------LSLRILAHTSDVNTVCFGDESGHLIYSGS 289 (372)
Q Consensus 223 ~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~iwd~~~~~------------~~~~~~~~~~~v~~~~~sp~~~~~l~s~~ 289 (372)
.....++.++|||+++++++ .+.+|.++|+.+.+ ....+. -......++|+ ++|...++.-
T Consensus 276 ----g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~-~dG~aY~t~~ 349 (595)
T 1fwx_A 276 ----ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFD-GRGNAYTSLF 349 (595)
T ss_dssp ----ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEEC-TTSEEEEEET
T ss_pred ----CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEEC-CCCeEEEEEe
Confidence 01456789999999887665 46789999999653 233332 33467899999 8994444555
Q ss_pred CCCeEEEEeccc----------cc------CCCCC-----eeEEEeccCCCeEEEEe
Q 017421 290 DDNLCKVNSVLL----------LT------RSINP-----CNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 290 ~dg~i~vwd~~~----------~~------~~~~~-----v~~~~~s~~g~~l~~~~ 325 (372)
.|+.|.+||+.. .+ .+..+ ...+.++|||++|+++.
T Consensus 350 ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 350 LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 799999999864 11 11111 12335689999999884
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.66 E-value=1.2e-06 Score=85.60 Aligned_cols=203 Identities=10% Similarity=0.079 Sum_probs=130.7
Q ss_pred CCEEEEEeC------CCcEEEEeCCCCeEEEEeeecccC-----------------------------CcceEEEEECCC
Q 017421 136 GSLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSL-----------------------------RWTVTDTSLSPD 180 (372)
Q Consensus 136 ~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~ 180 (372)
+..+++++. ++.|..||..+++.+......... ......++++|+
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 345555543 689999999999877654332211 001135788898
Q ss_pred CCEEEEEeCCC-------------------eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC--
Q 017421 181 QRHLVYASMSP-------------------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-- 239 (372)
Q Consensus 181 ~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~-- 239 (372)
+..++.++.++ .|..+|.++|+.+-...... +....+. .......+....+|
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~-~d~wd~~------~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETP-GDNWDYT------STQPMILADIKIAGKP 326 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCC------CCSCCEEEEEEETTEE
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCC-Ccccccc------cCCCcEEEecccCCcE
Confidence 89988887664 49999999998754433211 1111010 01122233444577
Q ss_pred -CEEEEEeCCCeEEEEECCCCeEEEEeecCC-----------CCe------------------------EEEEEeCCCCC
Q 017421 240 -RELVAGSSDDCIYVYDLEANKLSLRILAHT-----------SDV------------------------NTVCFGDESGH 283 (372)
Q Consensus 240 -~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~v------------------------~~~~~sp~~~~ 283 (372)
..++.++.+|.++++|..+++.+..+.... .++ ..++++ |++.
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d-p~~~ 405 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN-PQTG 405 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE-TTTT
T ss_pred eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc-CCCC
Confidence 678899999999999999999877664221 011 146888 7777
Q ss_pred EEEEEeC-------------------------------------------CCeEEEEeccccc-----CCCCCeeEEEec
Q 017421 284 LIYSGSD-------------------------------------------DNLCKVNSVLLLT-----RSINPCNKYLFN 315 (372)
Q Consensus 284 ~l~s~~~-------------------------------------------dg~i~vwd~~~~~-----~~~~~v~~~~~s 315 (372)
++++... .|.|..||+.+.+ .+..++.+..+.
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~ 485 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLT 485 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceE
Confidence 7766532 2779999987543 233344555566
Q ss_pred cCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421 316 PCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 316 ~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~ 352 (372)
..+..++.++ .|+.+++||..+|+++.++..
T Consensus 486 ~~g~~v~~g~------~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 486 TAGNVVFQGT------ADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp ETTTEEEEEC------TTSEEEEEETTTCCEEEEEEC
T ss_pred eCCCEEEEEC------CCCcEEEEECCCCceeeeeeC
Confidence 6777777664 588999999999999988853
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.66 E-value=1.4e-06 Score=85.24 Aligned_cols=195 Identities=11% Similarity=0.060 Sum_probs=122.9
Q ss_pred CCcEEEEeCCCCeEEEEeeecccC----------------------------CcceEEEEECCCCCEEEEEeCCCe----
Q 017421 145 ASQIRIYDVERGWKIQKDILAKSL----------------------------RWTVTDTSLSPDQRHLVYASMSPI---- 192 (372)
Q Consensus 145 dg~i~vwd~~~~~~~~~~~~~~~~----------------------------~~~v~~~~~~~~~~~l~~~~~dg~---- 192 (372)
+|.|..||..+++.+.......+. ......++++|+...++.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999877654321110 011135788898889998887764
Q ss_pred ---------------EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC---EEEEEeCCCeEEEE
Q 017421 193 ---------------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR---ELVAGSSDDCIYVY 254 (372)
Q Consensus 193 ---------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~---~l~s~s~dg~i~iw 254 (372)
|..+|.++|+.+-...... +....+. ...++.......+|+ .++.++.+|.++++
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~-~d~wd~~------~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~l 334 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTP-GDAWDYT------ATQHMILAELPIDGKPRKVLMQAPKNGFFYVI 334 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESST-TCCSCCC------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCC-ccccccc------CCCCcEEEeeccCCcEEEEEEEECCCCeEEEE
Confidence 9999999998754433210 1100000 111222223333565 78889999999999
Q ss_pred ECCCCeEEEEeecCC-CC--------------------------------------eEEEEEeCCCCCEEEEEeC-----
Q 017421 255 DLEANKLSLRILAHT-SD--------------------------------------VNTVCFGDESGHLIYSGSD----- 290 (372)
Q Consensus 255 d~~~~~~~~~~~~~~-~~--------------------------------------v~~~~~sp~~~~~l~s~~~----- 290 (372)
|.++|+.+....... .. -..++|+ |+..++++...
T Consensus 335 D~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d-p~~~~~yv~~~~~~~~ 413 (689)
T 1yiq_A 335 DRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN-PDTGLVYIPAHIMSAY 413 (689)
T ss_dssp ETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE-TTTTEEEEEEEECCEE
T ss_pred ECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC-CCCCEEEEecccccee
Confidence 999999874432110 00 0126788 66666665522
Q ss_pred ----------------------------------------CCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEe
Q 017421 291 ----------------------------------------DNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 291 ----------------------------------------dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
+|.|+.||+.+.+ .+..++..-.+...+..++.++
T Consensus 414 ~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 414 YEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp EECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC
T ss_pred eeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC
Confidence 3779999997543 2223333345556667777664
Q ss_pred eeeEEEeeceEEEeecccceEEEEEeee
Q 017421 326 ILVISIYSPNILLDNYFLLRTFYSFMVH 353 (372)
Q Consensus 326 ~~~~~~~d~~i~lw~~~~~~~~~~~~~h 353 (372)
.|+.++.||..+|+++..+...
T Consensus 494 ------~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 494 ------ADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp ------TTSEEEEEETTTCCEEEEEECS
T ss_pred ------CCCcEEEEECCCCccceeeeCC
Confidence 5899999999999999888643
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.65 E-value=4.3e-06 Score=82.72 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=96.4
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----cEEEEeCCCC-eEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeE
Q 017421 126 RAYVSQFS-ADGSLFVAGFQ-AS----QIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIV 193 (372)
Q Consensus 126 ~v~~~~~s-~~~~~l~~~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i 193 (372)
.+...+|| |||++||.+.. +| +|+++|+.++ +.+.... ......+.|+||++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-----~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-----SGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-----EEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-----cCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99999886533 23 4999999987 5322111 1124578999999988877664 258
Q ss_pred EEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCe-EE--EEee-
Q 017421 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANK-LS--LRIL- 266 (372)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~---dg~i~iwd~~~~~-~~--~~~~- 266 (372)
+++++.++........... .......+.|+|||++|+..+. ...|.++|+.++. .. ..+.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~-------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEH-------------NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EEEETTSCGGGCEEEEECC-------------CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EEEECCCCchhcEEEEecC-------------CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 8888877642211110000 1123567899999998876553 3458899998752 12 3333
Q ss_pred cCCCCeEEEEEeCCCCCEEEEEeCC--C--eEEEEecc
Q 017421 267 AHTSDVNTVCFGDESGHLIYSGSDD--N--LCKVNSVL 300 (372)
Q Consensus 267 ~~~~~v~~~~~sp~~~~~l~s~~~d--g--~i~vwd~~ 300 (372)
.......++.|+ .++.+++....+ + .|..+|+.
T Consensus 317 ~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 317 REKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp CCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 344566777776 444455555443 2 56666654
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.65 E-value=5.3e-06 Score=69.28 Aligned_cols=175 Identities=13% Similarity=0.072 Sum_probs=114.1
Q ss_pred CceEEEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCCC
Q 017421 125 SRAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSG 201 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~ 201 (372)
.-..++.|++ +.++.+.+.+| .|+++|+.+++.+....... .+......++++.|. ..-.++.+.+||.++.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP----PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC----CcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 3467899986 56666666654 89999999997776543322 122222222344444 4456899999999998
Q ss_pred ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC-----CCeEEEE
Q 017421 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVC 276 (372)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~ 276 (372)
+......... + -..++ +++..|+.+..++.|.++|..+.+.+.++.-.. ..++.+.
T Consensus 96 ~~~~ti~~~~--~---------------Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 96 TPRARFRYPG--E---------------GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp EEEEEEECSS--C---------------CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred cEEEEEeCCC--C---------------ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 8755544221 1 12333 567777777778899999999998887776321 3456777
Q ss_pred EeCCCCCEEEEEeCCCeEEEEeccccc-------------------CCCCCeeEEEeccCCCeEEEEe
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLLLT-------------------RSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~~~-------------------~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
|. +|++++..-.+..|.+.|.++.+ ....-.+.++++|+++.|.+..
T Consensus 157 ~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 157 WV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred Ee--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 75 67766655567788888886322 1123458899999877666553
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.64 E-value=3.8e-09 Score=95.58 Aligned_cols=186 Identities=11% Similarity=0.078 Sum_probs=90.1
Q ss_pred eEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceE-EEEECCCCCEE
Q 017421 106 HMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVT-DTSLSPDQRHL 184 (372)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l 184 (372)
+..++....+..+.+.. +.+.+..+..++..+++++.|+.|+.||..+++.+...... ....+. +..+. ++..+
T Consensus 21 v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~--~~~~~~~sp~~~-~~~~v 95 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT--IPELVQASPCRS-SDGIL 95 (369)
T ss_dssp EEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC--HHHHHTTCSCC------C
T ss_pred EEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc--CccccccCceEe-cCCEE
Confidence 33333333333344433 33444445567777888889999999999887554332111 011111 11111 34567
Q ss_pred EEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Q 017421 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR 264 (372)
Q Consensus 185 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 264 (372)
++++.++.|+.||.++|+........ ....++|++..+++++.++.|..||.++++.+..
T Consensus 96 ~~g~~dg~v~a~D~~tG~~~w~~~~~--------------------~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 96 YMGKKQDIWYVIDLLTGEKQQTLSSA--------------------FADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CCCEEEEEEEEECCC------------------------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred EEEeCCCEEEEEECCCCcEEEEecCC--------------------CcccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 77888999999999999864333210 0134556788899999999999999999987655
Q ss_pred eecCCCCeEEEEEeCCCC---CEEEEEeCCCeEEEEeccccc-----CCCCCee-EEEeccCCC
Q 017421 265 ILAHTSDVNTVCFGDESG---HLIYSGSDDNLCKVNSVLLLT-----RSINPCN-KYLFNPCNK 319 (372)
Q Consensus 265 ~~~~~~~v~~~~~sp~~~---~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~-~~~~s~~g~ 319 (372)
+..+. .....+. .+. ..+++++.||.|+.||.++.+ ....++. ...++++|.
T Consensus 156 ~~~~~--~~~~~~~-~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 156 ATYFD--YAASLPE-DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEE--ECCBCCC-CCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred Eeccc--ccCcccc-CCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 54221 1223333 321 456778899999999987543 1233433 345556664
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.63 E-value=2.7e-06 Score=83.25 Aligned_cols=191 Identities=12% Similarity=0.083 Sum_probs=121.0
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEeCCCCeEEEEeeeccc------CCcceEEEEECCCCC-
Q 017421 129 VSQFSADGSLFVAGFQASQ-------------------IRIYDVERGWKIQKDILAKS------LRWTVTDTSLSPDQR- 182 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~- 182 (372)
.++++|++.+++++..++. |..+|..+++.+........ ...++.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5789998899998887763 99999999977765432211 111122222223554
Q ss_pred --EEEEEeCCCeEEEEECCCCceeeecceeecc-------------------------cccceeccCCCCccccEEEEEE
Q 017421 183 --HLVYASMSPIVHIVDVGSGTMESLANVTEIH-------------------------DGLDFSAADDGGYSFGIFSLKF 235 (372)
Q Consensus 183 --~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~h~~~i~~~~~ 235 (372)
.++.++.+|.++++|..+|+.+......... ......+...+++ .-..++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~--~w~~~a~ 396 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAH--DWQPMSY 396 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSS--CSSCCEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccccc--CCCcceE
Confidence 6888899999999999999875332211100 0000011111111 1123788
Q ss_pred cCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCeEEEEeecCCC
Q 017421 236 STDGRELVAGSS---------------------------------------------DDCIYVYDLEANKLSLRILAHTS 270 (372)
Q Consensus 236 sp~~~~l~s~s~---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~ 270 (372)
+|+..++++.+. +|.|..||+.+++.+..+..+.
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~- 475 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT- 475 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-
Confidence 888877776532 3779999999999988877543
Q ss_pred CeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEE
Q 017421 271 DVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLII 323 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~ 323 (372)
++..-.+. ..+.++++++.||.|+.||.++.+ .......-+.|..+|+..++
T Consensus 476 ~~~~g~~~-tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 IFNGGTLS-TAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CccCccce-ECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 33334555 577899999999999999998554 22222244677888875544
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.61 E-value=2.2e-05 Score=69.22 Aligned_cols=183 Identities=12% Similarity=0.047 Sum_probs=115.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc-----------------cCCcceEEEEECC-CCCEEEE
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-----------------SLRWTVTDTSLSP-DQRHLVY 186 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~-~~~~l~~ 186 (372)
....+++|+++++++.++..++.|..|+..++.... ..... .....+..+++.+ +++ |++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 345678899999877788888999999987653321 11100 0012478899998 554 555
Q ss_pred EeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeC-----------------C
Q 017421 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSS-----------------D 248 (372)
Q Consensus 187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~-----------------d 248 (372)
+...+.|..+|..++......... .+ ......+.+++.| +|++.++-.. +
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~---~~---------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSV---DG---------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEE---TT---------EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred EECCCCEEEEeCCCCEEEEecccC---CC---------CcccccceEEEecCCCEEEEECCcccccccccceehcccCCC
Confidence 555556888887765432221110 00 0112578899999 9987776532 3
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEE-eCCCeEEEEeccccc--------CCCCCeeEEEeccCCC
Q 017421 249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSG-SDDNLCKVNSVLLLT--------RSINPCNKYLFNPCNK 319 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~-~~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~g~ 319 (372)
+.|..||..+++...... .......++++ ++++.|+.+ ...+.|.+|++.... .... ...+++.++|+
T Consensus 165 g~v~~~d~~~~~~~~~~~-~~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK-ELHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEEEEEEE-EESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEEEEecc-CCccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 679999988776433222 22345679999 898866655 456889999876211 1122 67899999998
Q ss_pred eEEEE
Q 017421 320 YLIIY 324 (372)
Q Consensus 320 ~l~~~ 324 (372)
+.++.
T Consensus 242 l~va~ 246 (322)
T 2fp8_A 242 FWVSS 246 (322)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66655
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=4e-06 Score=81.89 Aligned_cols=193 Identities=12% Similarity=0.101 Sum_probs=123.5
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEeeecccC------CcceEEEEECCCC-
Q 017421 128 YVSQFSADGSLFVAGFQAS-------------------QIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQ- 181 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~- 181 (372)
..++++|++..++.+..++ .|..+|..+++.+......... ......+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578999999888877654 4999999999776654432211 1122223333467
Q ss_pred --CEEEEEeCCCeEEEEECCCCceeeecceeecc-------cc-c-------------ceeccCCCCccccEEEEEEcCC
Q 017421 182 --RHLVYASMSPIVHIVDVGSGTMESLANVTEIH-------DG-L-------------DFSAADDGGYSFGIFSLKFSTD 238 (372)
Q Consensus 182 --~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~-~-------------~~~~~~~~~h~~~i~~~~~sp~ 238 (372)
..++.++.+|.++++|..+|+.+......... .+ . ...+...+++. -..++++|+
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~--w~~~a~dp~ 403 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN--WHPMSFNPQ 403 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC--SSCCEEETT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC--CCCceEcCC
Confidence 67888999999999999999875443321100 00 0 00011111111 125788998
Q ss_pred CCEEEEEeCC-------------------------------------------CeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421 239 GRELVAGSSD-------------------------------------------DCIYVYDLEANKLSLRILAHTSDVNTV 275 (372)
Q Consensus 239 ~~~l~s~s~d-------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~v~~~ 275 (372)
+.++++...+ |.|..||+.+++.+..+. +..++...
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g 482 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGG 482 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCC
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCc
Confidence 8888775432 789999999999888876 33445555
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEE
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.+. ..+.++++++.||.+++||.++.+ .......-+.|.++|+.+++.
T Consensus 483 ~~~-~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 483 TLT-TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp EEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ceE-eCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 566 677788889999999999998543 222223446677888755443
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.45 E-value=1.2e-05 Score=70.89 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=102.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccc
Q 017421 136 GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDG 215 (372)
Q Consensus 136 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 215 (372)
+..|.+++.++.|..+|.. +....... .....+.++...+++. +..++.++.|..+|.. ++........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~---~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~----- 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFK---TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN----- 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEE---CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS-----
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEc---CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC-----
Confidence 4557778888999999988 65444322 1222456667777776 5567778999999998 6543322211
Q ss_pred cceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEE
Q 017421 216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCK 295 (372)
Q Consensus 216 ~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~ 295 (372)
...+.++...+++.+++ ++ +.|..+| .+++...........+.++... ++|. |..++.++.|.
T Consensus 176 -----------~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~~g~-l~v~t~~~gl~ 238 (330)
T 3hxj_A 176 -----------DAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-EDGT-IYVTSLDGHLY 238 (330)
T ss_dssp -----------SCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-TTSC-EEEEETTTEEE
T ss_pred -----------CCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEEC-CCCe-EEEEcCCCeEE
Confidence 12455666777777554 44 7799999 7777776666555678888887 7765 44456677788
Q ss_pred EEeccc-----ccCCCCCeeEEEeccCCCeEEEE
Q 017421 296 VNSVLL-----LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 296 vwd~~~-----~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.+|... .......+..+.+.++|.+.+..
T Consensus 239 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t 272 (330)
T 3hxj_A 239 AINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGS 272 (330)
T ss_dssp EECTTSCEEEEEECSSCCCSCCEECTTSCEEEEC
T ss_pred EECCCCCEeEEeeCCCCccccceEcCCCeEEEec
Confidence 877531 11222334456666677655544
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.44 E-value=0.00011 Score=62.73 Aligned_cols=184 Identities=9% Similarity=0.010 Sum_probs=108.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEE--EeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeecceeecc
Q 017421 137 SLFVAGFQASQIRIYDVERGWKIQ--KDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIH 213 (372)
Q Consensus 137 ~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~ 213 (372)
++|+.+.. +.|+.+++....... ...........+..++|++++..|+.+. ..+.|.++++.+........ .
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~-- 76 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR--Q-- 76 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC--T--
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE--C--
Confidence 45555554 478888887643210 0000111112478999999776666554 47899999997654322111 0
Q ss_pred cccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC--
Q 017421 214 DGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-- 290 (372)
Q Consensus 214 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-- 290 (372)
.......++++|++..|+ +-...+.|.++++..................++++ +++..|+.+..
T Consensus 77 ------------~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd-~~~g~lyv~~~~~ 143 (267)
T 1npe_A 77 ------------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTD-PVRGNLYWTDWNR 143 (267)
T ss_dssp ------------TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTTTEEEEEECCS
T ss_pred ------------CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEe-eCCCEEEEEECCC
Confidence 112578899999765554 44556889999987543222222222567899999 75555544443
Q ss_pred -CCeEEEEeccc-----cc-CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421 291 -DNLCKVNSVLL-----LT-RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL 343 (372)
Q Consensus 291 -dg~i~vwd~~~-----~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~ 343 (372)
.+.|..+++.. +. ........++++|++..|+.+.. ..+.|..++...
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~-----~~~~I~~~~~~g 198 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA-----GTHRAECLNPAQ 198 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTE
T ss_pred CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC-----CCCEEEEEecCC
Confidence 46888887652 11 22345788999999887776631 124455555543
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.42 E-value=2.1e-05 Score=70.58 Aligned_cols=98 Identities=9% Similarity=-0.063 Sum_probs=68.9
Q ss_pred cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------CCCeEEEEECCCCceeeecceeeccccc
Q 017421 147 QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDVGSGTMESLANVTEIHDGL 216 (372)
Q Consensus 147 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 216 (372)
.|.++|..+++.+....... .+ .+.++||+++++++. .++.|.+||+.+++............
T Consensus 47 ~vsvID~~t~~v~~~i~vG~---~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~-- 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF---LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-- 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT---TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS--
T ss_pred eEEEEECCCCeEEEEEeCCC---CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc--
Confidence 78899999997776644322 23 799999999998886 36889999999998765544320000
Q ss_pred ceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEE--EECCC
Q 017421 217 DFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYV--YDLEA 258 (372)
Q Consensus 217 ~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~i--wd~~~ 258 (372)
+. .......+.++|||++++++.. +..|.+ +|+.+
T Consensus 120 -~~------~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 120 -FS------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp -CC------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred -cc------cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 00 0012446899999999988764 457888 88866
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.41 E-value=2.5e-05 Score=66.42 Aligned_cols=154 Identities=8% Similarity=0.043 Sum_probs=101.2
Q ss_pred ceEEEEECCCCCEEEEEeC--CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeC
Q 017421 171 TVTDTSLSPDQRHLVYASM--SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSS 247 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~ 247 (372)
....+.|++++.++++.+. ++.|.++|+.+++......+... .....+++. ++.|. +.-.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~---------------~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS---------------YFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT---------------CCEEEEEEE--TTEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC---------------cceEEEEEe--CCEEEEEEec
Confidence 3679999998755554443 57999999999987654432211 012245554 44554 4455
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc--------CCC---CCeeEEEecc
Q 017421 248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT--------RSI---NPCNKYLFNP 316 (372)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~~~---~~v~~~~~s~ 316 (372)
++.+.++|..+.+.+.++...... ...++ ++|+.++++..++.|.++|..+.+ ... ..++.+.|.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt-~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLA-TDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEE-ECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEE-ECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 789999999999998888633121 23355 567766666678999999987543 111 135677887
Q ss_pred CCCeEEEEeeeeEEEe-eceEEEeecccceEEEEEee
Q 017421 317 CNKYLIIYLILVISIY-SPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 317 ~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~~~~~ 352 (372)
+|+ +.+.. | ++.|.+-|..+++.+..+..
T Consensus 161 dg~-lyvn~------~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 161 NGE-VWANI------WQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp TTE-EEEEE------TTSSEEEEEETTTCCEEEEEEC
T ss_pred CCE-EEEec------CCCCeEEEEECCCCcEEEEEEC
Confidence 664 44332 3 57888889999988777654
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.36 E-value=0.00016 Score=63.12 Aligned_cols=186 Identities=12% Similarity=0.065 Sum_probs=111.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC--CeEEEEECCCCc
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--PIVHIVDVGSGT 202 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~ 202 (372)
....+++|+++++++++-..++.|..||..... .. .... ...+..+++.++++++++.... ..|..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~-~~~~---~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QI-HATV---EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EE-EEEC---SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EE-EEeC---CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 457789999999977777678899999987642 22 1111 2358899999999966655432 247777877776
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE-EEEee---------cCCCCe
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-SLRIL---------AHTSDV 272 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~---------~~~~~v 272 (372)
......... ......++..+++..+++-..++.|.++|..+++. +.... ..-...
T Consensus 107 ~~~~~~~~~---------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 107 VETLLTLPD---------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEEEECTT---------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred EEEEEeCCC---------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 533222110 01234445555555555555688999999876532 21111 111234
Q ss_pred EEEEEeCCCCCEEEEE-eCCCeEEEEeccc-cc-------CCCCCeeEEEeccCCCeEEEEe-eeeEEEee
Q 017421 273 NTVCFGDESGHLIYSG-SDDNLCKVNSVLL-LT-------RSINPCNKYLFNPCNKYLIIYL-ILVISIYS 333 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~-~~dg~i~vwd~~~-~~-------~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~d 333 (372)
..+ + ++++.|+.+ ...+.|..|++.. .. ........++++++|++.++.. .+.+..+|
T Consensus 172 ngi--s-~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 172 NGL--K-RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp EEE--E-EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred CCc--C-cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 555 6 677666555 4678899999863 11 0113457789999997655442 23344444
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.33 E-value=0.00039 Score=62.44 Aligned_cols=144 Identities=12% Similarity=0.075 Sum_probs=90.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccC------CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421 136 GSLFVAGFQASQIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (372)
Q Consensus 136 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (372)
+..+++++.++.|..+|..+++.+......... ...+.+ ....++..+++++.++.|..+|..+++.......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 667888888899999999988766543321110 112221 1122456788888999999999999986543322
Q ss_pred eecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe-----EEEEEeCCCCCE
Q 017421 210 TEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV-----NTVCFGDESGHL 284 (372)
Q Consensus 210 ~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~sp~~~~~ 284 (372)
.... ...++ .. +..+++++.++.|..+|..+++.+.......... ...... +..
T Consensus 132 ~~~~------------~~~p~----~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~ 190 (376)
T 3q7m_A 132 AGEA------------LSRPV----VS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGA 190 (376)
T ss_dssp SSCC------------CSCCE----EE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTE
T ss_pred CCce------------EcCCE----EE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCE
Confidence 1100 01111 11 4477888889999999999999887766432211 222332 346
Q ss_pred EEEEeCCCeEEEEeccc
Q 017421 285 IYSGSDDNLCKVNSVLL 301 (372)
Q Consensus 285 l~s~~~dg~i~vwd~~~ 301 (372)
++.+..++.|..+|..+
T Consensus 191 v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 191 AVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp EEECCTTTEEEEEETTT
T ss_pred EEEEcCCCEEEEEECCC
Confidence 77778889999998763
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.32 E-value=1.9e-05 Score=69.49 Aligned_cols=176 Identities=14% Similarity=0.037 Sum_probs=109.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
....+.++...+++. +.+++.++.|..+|.. +........ ....+.++...+++..++ ++ +.|..+| .+++
T Consensus 135 ~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 135 KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT---NDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGT 205 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSC
T ss_pred CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec---CCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc
Confidence 344456667777777 5557778899999988 655443221 223466777877777554 44 7889999 6655
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 282 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 282 (372)
....... ....+.++...++|. |..++.++.|..+|. +++.+..+......+.++.+. +++
T Consensus 206 ~~~~~~~----------------~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~-~~g 266 (330)
T 3hxj_A 206 EKWNFYA----------------GYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIG-NTD 266 (330)
T ss_dssp EEEEECC----------------SSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEEC-TTS
T ss_pred EEEEEcc----------------CCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEc-CCC
Confidence 4322211 112466777888876 455666788888874 565656655444444555665 555
Q ss_pred CEEEEEeCCCeEEEEeccc-----ccCCCCCeeEEEeccCCCeEEEEeee
Q 017421 283 HLIYSGSDDNLCKVNSVLL-----LTRSINPCNKYLFNPCNKYLIIYLIL 327 (372)
Q Consensus 283 ~~l~s~~~dg~i~vwd~~~-----~~~~~~~v~~~~~s~~g~~l~~~~~~ 327 (372)
.|..++.+|.|..+|... .......+.++...++|++.+.+.++
T Consensus 267 -~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 267 -TIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp -CEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTS
T ss_pred -eEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCC
Confidence 456677788898888531 11233456677777888776665433
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.30 E-value=3.8e-05 Score=64.71 Aligned_cols=152 Identities=8% Similarity=-0.020 Sum_probs=98.8
Q ss_pred ceEEEEECCCCCEEEEEeCCC--eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE-eC
Q 017421 171 TVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SS 247 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~-s~ 247 (372)
-...+.|+ ++.++.+.+.+| .|+++|+++++......+.. ........++++.|... -.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-----------------~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-----------------RYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-----------------TCCEEEEEEETTEEEEEESS
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-----------------ccceeEEEEeCCEEEEEEee
Confidence 45789998 676677777766 89999999999765544321 12222222334555444 45
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc--------CCC---CCeeEEEecc
Q 017421 248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT--------RSI---NPCNKYLFNP 316 (372)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~~~---~~v~~~~~s~ 316 (372)
++.+.+||..+.+.+.++.... .-..++ +++..|+.+..++.|.++|..+++ ... ..++.+.|.
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~-eG~glt---~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG-EGWGLT---HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS-CCCCEE---ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECccCcEEEEEECCC-CceEEe---cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 7899999999999999887432 223333 456666666668889999987543 111 223457776
Q ss_pred CCCeEEEEeeeeEEEe-eceEEEeecccceEEEEEee
Q 017421 317 CNKYLIIYLILVISIY-SPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 317 ~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~~~~~ 352 (372)
+|+..+.. | +..|.+.|..+++.+..+..
T Consensus 181 ~G~lyan~-------w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 181 DGEIFANV-------WQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp TTEEEEEE-------TTSSEEEEECTTTCBEEEEEEC
T ss_pred CCEEEEEE-------ccCCeEEEEECCCCcEEEEEEC
Confidence 66544333 4 57788888888888776654
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.23 E-value=0.00036 Score=61.34 Aligned_cols=155 Identities=12% Similarity=0.019 Sum_probs=94.5
Q ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeee-ccc-CCcceEEEEECC-CCCEEEEEeC-----------
Q 017421 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDIL-AKS-LRWTVTDTSLSP-DQRHLVYASM----------- 189 (372)
Q Consensus 125 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~l~~~~~----------- 189 (372)
..+.++++.+ +++++ ++...+.|..+|..++.. ..... ..+ ....+..+++.+ +|+.+++-..
T Consensus 80 ~~p~gi~~~~~~g~l~-v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLY-IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTTEEE-EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCCcEE-EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 3578999998 66544 444445588888765422 11111 111 112467899999 8987666432
Q ss_pred ------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCe--
Q 017421 190 ------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEANK-- 260 (372)
Q Consensus 190 ------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~-s~dg~i~iwd~~~~~-- 260 (372)
++.|..||..+++....... ....+.++|+|+++.|+.+ +..+.|.+|++....
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~-----------------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE-----------------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG 220 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE-----------------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC-----------------CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC
Confidence 36788888877654322110 0135679999999866554 556899999987421
Q ss_pred EEEEeecCCCCeEEEEEeCCCCCEEEEEeC----------CCeEEEEecc
Q 017421 261 LSLRILAHTSDVNTVCFGDESGHLIYSGSD----------DNLCKVNSVL 300 (372)
Q Consensus 261 ~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~----------dg~i~vwd~~ 300 (372)
....+....+ ...+++. ++|++.++... .+.|..+|..
T Consensus 221 ~~~~~~~~~g-P~gi~~d-~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 221 TAEVLVKIPN-PGNIKRN-ADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp CEEEEEECSS-EEEEEEC-TTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred ccceEEeCCC-CCCeEEC-CCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 1111211223 7889998 88987766544 3567777754
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.23 E-value=0.00081 Score=58.62 Aligned_cols=191 Identities=10% Similarity=0.046 Sum_probs=109.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCC--CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421 123 TTSRAYVSQFSADGSLFVAGFQA--SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 200 (372)
....+.+++++++|+++++.... ..|..++..++.... ...... ......++..+++..+++-..++.|+++|..+
T Consensus 70 ~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~-~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 70 VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET-LLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE-EEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE-EEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 34578899999999976665432 246677777664322 111111 11234555555554455444588999999876
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE-EeCCCeEEEEECCC-CeE--EEEeecCCCCeEEEE
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEA-NKL--SLRILAHTSDVNTVC 276 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s-~s~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~ 276 (372)
+............. .... +.....+.+ +|+++.|+. -+..+.|..|++.. ++. ...+.. ......++
T Consensus 148 ~~~~v~~~~~~~~~---~~~~---~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~ 218 (306)
T 2p4o_A 148 PSGSIWLEHPMLAR---SNSE---SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFA 218 (306)
T ss_dssp TEEEEEEECGGGSC---SSTT---CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEE
T ss_pred CcEeEEEECCcccc---cccc---CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeE
Confidence 43111100000000 0000 011134455 788876654 45568899999874 321 112211 13456789
Q ss_pred EeCCCCCEEEEEeCCCeEEEEeccc-c------cCCCCCeeEEEec---cCCCeEEEEe
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLL-L------TRSINPCNKYLFN---PCNKYLIIYL 325 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~-~------~~~~~~v~~~~~s---~~g~~l~~~~ 325 (372)
++ ++|+++++....+.|.++|..- . ......+++++|. |+++.|+++.
T Consensus 219 vd-~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 219 FD-VEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EB-TTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EC-CCCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 98 8998877777788899998651 1 1122557999998 8988777664
No 252
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.22 E-value=0.00067 Score=60.87 Aligned_cols=187 Identities=9% Similarity=0.075 Sum_probs=108.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeeccc
Q 017421 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (372)
Q Consensus 135 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (372)
++..+++++.++.|..+|..+++.+......... ...... .+..+++++.++.|..+|..+++............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~---~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA---LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC---CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce---EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 4567888888999999999998766543322111 111122 24578888899999999999998654433211100
Q ss_pred ccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC----------e-EEEEEeCCCCC
Q 017421 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD----------V-NTVCFGDESGH 283 (372)
Q Consensus 215 ~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----------v-~~~~~sp~~~~ 283 (372)
. . .+. ...... +..++.++.++.+..+|..+++.+......... + ..... .+.
T Consensus 177 ~--~-----~~~----~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~ 240 (376)
T 3q7m_A 177 S--L-----RGE----SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNG 240 (376)
T ss_dssp ---------CCC----CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETT
T ss_pred e--e-----cCC----CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECC
Confidence 0 0 000 111111 346777888999999999999887766532110 1 11112 245
Q ss_pred EEEEEeCCCeEEEEeccccc----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 284 LIYSGSDDNLCKVNSVLLLT----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 284 ~l~s~~~dg~i~vwd~~~~~----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
.++.++.++.+..+|.++.+ ........+... +..+++++ .++.+..+|..+++.+...
T Consensus 241 ~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~~l~~~~------~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD--GNRIYLVD------QNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE--TTEEEEEE------TTCCEEEEETTTCCEEEEE
T ss_pred EEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE--CCEEEEEc------CCCeEEEEECCCCcEEEee
Confidence 67777788999999987443 112223333332 33444443 3566667777777665544
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.22 E-value=0.00083 Score=60.76 Aligned_cols=201 Identities=8% Similarity=-0.040 Sum_probs=115.6
Q ss_pred CCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCC
Q 017421 123 TTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGS 200 (372)
Q Consensus 123 ~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~ 200 (372)
....+.+++|++.+..| .+-...+.|..+++........ . ..+ ......+++.+.+..|+ +-...+.|.+.++..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~-~-~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV-V-STG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE-E-CSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE-E-eCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 34568899999865555 4545668899999876532221 1 111 12356788887655554 444567888888875
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCeEEEEeecCCCCeEEEEEe
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEANKLSLRILAHTSDVNTVCFG 278 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 278 (372)
.....+.. ........++++|.+..|+... .. +.|..+++..................|+|+
T Consensus 191 ~~~~~l~~----------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 191 AHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTID 254 (386)
T ss_dssp CSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred CceEEeec----------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEe
Confidence 43222211 0112578899999766665444 44 689999887543333333334467899999
Q ss_pred CCCCCEEE-EEeCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 279 DESGHLIY-SGSDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 279 p~~~~~l~-s~~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
+++..|+ +-...+.|..+|+.-. .........+++. .+ .|+.+. ...+.|...+..+|+.+..+
T Consensus 255 -~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~-~ly~td-----~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 255 -YAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWTD-----WHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp -GGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT-EEEEEE-----TTTTEEEEEETTTCCSCEEE
T ss_pred -CCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC-EEEEee-----CCCCeEEEEECCCCcceEEE
Confidence 5555554 4446678999887521 1223345667763 23 333331 02355556665555544433
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.21 E-value=0.0025 Score=55.89 Aligned_cols=200 Identities=8% Similarity=-0.085 Sum_probs=114.6
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCC---eEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEEC
Q 017421 124 TSRAYVSQFSADGSLFV-AGFQASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDV 198 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~ 198 (372)
...+.+++|++++..|. +-...+.|..+++... ...... ....-..+..+++++.+..|+ +-...+.|.+.++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 45678999998765554 4455688999998751 111111 111112467889987555554 4456789999998
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-C-CeEEEEECCCCeEEEEe-ecCCCCeEEE
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-DCIYVYDLEANKLSLRI-LAHTSDVNTV 275 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-d-g~i~iwd~~~~~~~~~~-~~~~~~v~~~ 275 (372)
.......... . .......++++|.+..|+.+.. . +.|..+++.... ...+ ...-.....+
T Consensus 107 ~g~~~~~~~~--~--------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 107 KGVKRKTLFR--E--------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGI 169 (316)
T ss_dssp TSSSEEEEEE--C--------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEE
T ss_pred CCCceEEEEE--C--------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEE
Confidence 7544322211 0 1125688999997665554443 3 689888886433 2333 2334567899
Q ss_pred EEeCCCCCEEEEEe-CCCeEEEEeccc-----c-c--CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceE
Q 017421 276 CFGDESGHLIYSGS-DDNLCKVNSVLL-----L-T--RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRT 346 (372)
Q Consensus 276 ~~sp~~~~~l~s~~-~dg~i~vwd~~~-----~-~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~ 346 (372)
+++ +++..|+.+. ..+.|..+|+.. + . ........+++.. ..|+.+.- ..+.|...+..+++.
T Consensus 170 a~d-~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~--~~ly~~d~-----~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 170 TLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI-----INEAIFSANRLTGSD 241 (316)
T ss_dssp EEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEEET-----TTTEEEEEETTTCCC
T ss_pred EEe-ccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC--CEEEEEEC-----CCCeEEEEeCCCCcc
Confidence 999 6655555554 567899999852 1 0 1123356677642 33433310 235666666666655
Q ss_pred EEEE
Q 017421 347 FYSF 350 (372)
Q Consensus 347 ~~~~ 350 (372)
+..+
T Consensus 242 ~~~i 245 (316)
T 1ijq_A 242 VNLL 245 (316)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.21 E-value=0.00019 Score=60.40 Aligned_cols=152 Identities=5% Similarity=-0.099 Sum_probs=100.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
-...+.|+ ++.++.+.+.+|.|+++|+++++..... +.... .--.+++.. +++.+..-.++.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~---------------FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI---------------FAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC---------------CEEEEEECS-SCEEEEESSSCE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc---------------ceeEEEEeC-CEEEEEEccCCE
Confidence 35788887 4566777788899999999999876554 22110 112344432 244445556889
Q ss_pred EEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc--------CCC---CCeeEEEeccCCC
Q 017421 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT--------RSI---NPCNKYLFNPCNK 319 (372)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~~~---~~v~~~~~s~~g~ 319 (372)
+.+||..+.+.+.++... ..-..+++ +++.|+.+..++.|.++|..+++ ... ..++.+.|. +|+
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 999999999999998743 22244444 56777777778999999987543 111 234566776 665
Q ss_pred eEEEEeeeeEEEe-eceEEEeecccceEEEEEee
Q 017421 320 YLIIYLILVISIY-SPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 320 ~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~~~~~ 352 (372)
..+.. | +..|.+-|..+++.+..+..
T Consensus 193 lyanv-------w~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 193 IYANI-------WHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EEEEE-------TTCSEEEEECTTTCBEEEEEEC
T ss_pred EEEEE-------CCCCeEEEEeCCCCcEEEEEEC
Confidence 44333 4 56788888888887776654
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.21 E-value=0.00096 Score=59.44 Aligned_cols=199 Identities=8% Similarity=-0.048 Sum_probs=114.1
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCCC
Q 017421 124 TSRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSG 201 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~ 201 (372)
...+.+++|++.+..|. +-...+.|..+++........ ...+ ...+..+++.+.+..|+ +-...+.|.+.++...
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE--EeCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 34578999998665554 445668899999876532221 1111 12467889988555554 4455778999998755
Q ss_pred ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCC-CeEEEEECCCCeEEEEeecCCCCeEEEEEeC
Q 017421 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSD-DCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (372)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 279 (372)
....... ........++++|.+..|+ +-... +.|..+++............-.....++++
T Consensus 149 ~~~~l~~----------------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d- 211 (349)
T 3v64_C 149 HRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTID- 211 (349)
T ss_dssp SCEEEEC----------------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEE-
T ss_pred ceEEEEe----------------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEe-
Confidence 4222211 0112568899999665554 44444 789999887443222222234467899999
Q ss_pred CCCCEEEEE-eCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421 280 ESGHLIYSG-SDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS 349 (372)
Q Consensus 280 ~~~~~l~s~-~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~ 349 (372)
+++..|+.+ ...+.|..+|+.-. .........+++. .+ .|..+.- ..+.|...+-.+|+....
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~td~-----~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWTDW-----HTKSINSANKFTGKNQEI 281 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEEET-----TTTEEEEEETTTCCSCEE
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEecC-----CCCeEEEEEccCCCccEE
Confidence 655555544 45678999987521 1223345666763 23 3333310 124555555445554433
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=0.00025 Score=69.10 Aligned_cols=194 Identities=13% Similarity=0.090 Sum_probs=118.3
Q ss_pred CCcEEEEeCCCCeEEEEeeecccC----------------------------CcceEEEEECCCCCEEEEEeCCC-----
Q 017421 145 ASQIRIYDVERGWKIQKDILAKSL----------------------------RWTVTDTSLSPDQRHLVYASMSP----- 191 (372)
Q Consensus 145 dg~i~vwd~~~~~~~~~~~~~~~~----------------------------~~~v~~~~~~~~~~~l~~~~~dg----- 191 (372)
+|.|..+|..+++.+......... ......++++|+...++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999877654321110 00112468888888888887766
Q ss_pred --------------eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC---EEEEEeCCCeEEEE
Q 017421 192 --------------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR---ELVAGSSDDCIYVY 254 (372)
Q Consensus 192 --------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~---~l~s~s~dg~i~iw 254 (372)
.|..+|.++|+.+-...... +....+. ...+.....+..+|+ .++.++.+|.++++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~~------~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDFT------ATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCC------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-Ccccccc------CCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 39999999998754443210 1110000 012333333334665 68889999999999
Q ss_pred ECCCCeEEEEeecCC------------CCe------------------------EEEEEeCCCCCEEEEE----------
Q 017421 255 DLEANKLSLRILAHT------------SDV------------------------NTVCFGDESGHLIYSG---------- 288 (372)
Q Consensus 255 d~~~~~~~~~~~~~~------------~~v------------------------~~~~~sp~~~~~l~s~---------- 288 (372)
|..+|+.+....... .++ ..++++ |+..++++.
T Consensus 330 D~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~d-p~~g~~yv~~~~~~~~~~~ 408 (668)
T 1kv9_A 330 DRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFN-PGTGLVYIPYQEVPGVYRN 408 (668)
T ss_dssp ETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEE-TTTTEEEEEEEECCEEECC
T ss_pred ECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceEC-CCCCEEEEeccccceEeee
Confidence 999999875443211 000 125777 554554431
Q ss_pred --------------------------eCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEE
Q 017421 289 --------------------------SDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNIL 337 (372)
Q Consensus 289 --------------------------~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~ 337 (372)
..+|.|..||+.+.+ ....+.....+...+.++++++ .|+.++
T Consensus 409 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~------~dg~l~ 482 (668)
T 1kv9_A 409 EGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT------AAGQMH 482 (668)
T ss_dssp CGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEE
T ss_pred eccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC------Ccccch
Confidence 123779999987543 1222333334445566666664 588999
Q ss_pred EeecccceEEEEEee
Q 017421 338 LDNYFLLRTFYSFMV 352 (372)
Q Consensus 338 lw~~~~~~~~~~~~~ 352 (372)
.||..+|+.+..+..
T Consensus 483 a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 483 AYSADKGEALWQFEA 497 (668)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred hhhhhcChhheEecC
Confidence 999999999888754
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.19 E-value=0.00026 Score=59.07 Aligned_cols=154 Identities=11% Similarity=-0.044 Sum_probs=98.9
Q ss_pred CcceEEEEECCCCCEEEEEeCC--CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEE
Q 017421 169 RWTVTDTSLSPDQRHLVYASMS--PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAG 245 (372)
Q Consensus 169 ~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~ 245 (372)
..-...+.|++ +.++.+.+.. ..|+++|+.+++......+.... .--.+++. ++.| +..
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---------------fgeGi~~~--~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---------------FGAGIVAW--RDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC---------------CEEEEEEE--TTEEEEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc---------------ceeEEEEe--CCEEEEEE
Confidence 34577899986 5556666664 48999999999986555432211 11223333 4444 444
Q ss_pred eCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc--------CCC---CCeeEEEe
Q 017421 246 SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT--------RSI---NPCNKYLF 314 (372)
Q Consensus 246 s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~~~---~~v~~~~~ 314 (372)
-.++.+.+||.++.+.+.++.... .-..++. ++..|+.+..++.|.++|..+++ .+. ..++.+.|
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPG-EGWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSS-CCCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred eeCCEEEEEECCcCcEEEEEeCCC-CceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 567899999999999999987433 2245543 45556666678899999987543 111 23455565
Q ss_pred ccCCCeEEEEeeeeEEEe-eceEEEeecccceEEEEEee
Q 017421 315 NPCNKYLIIYLILVISIY-SPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 315 s~~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~~~~~ 352 (372)
. +|+..+.. | +..|.+-|..+|+.+..+..
T Consensus 158 ~-~G~lyanv-------w~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 158 V-NGELLANV-------WLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp E-TTEEEEEE-------TTTTEEEEECTTTCBEEEEEEC
T ss_pred e-CCEEEEEE-------CCCCeEEEEECCCCCEEEEEEC
Confidence 4 56544333 4 57788888888888776654
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.17 E-value=0.00028 Score=61.43 Aligned_cols=170 Identities=12% Similarity=0.132 Sum_probs=108.6
Q ss_pred CCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeEEEEeeeccc------CCcceEEEEE---CCCCCEEEEEe-----
Q 017421 124 TSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILAKS------LRWTVTDTSL---SPDQRHLVYAS----- 188 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~l~~~~----- 188 (372)
.-..-+++|++....|..++ ..++|..|+...+..... . ..+ ....+..+.| .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-V-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-C-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-e-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 34455688988555555555 789999999976533322 1 221 1124689999 68887777644
Q ss_pred --------CCCeEEEEECC---CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-CeEEEEEC
Q 017421 189 --------MSPIVHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-DCIYVYDL 256 (372)
Q Consensus 189 --------~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-g~i~iwd~ 256 (372)
.+..|..||+. +++......+.....+ +.+.. +.-......++..++|+..++++.. +.|...+.
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~--~~~~~-g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE--FEKKA-GKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH--HHHHH-SSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc--ccccc-cccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 25779999999 7766444332211100 00000 0001258899999999999999888 88887777
Q ss_pred CCCeEEEEee------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 257 EANKLSLRIL------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 257 ~~~~~~~~~~------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
... .+..+. ......+.|+++ |+|+.|++....|.|..+|++
T Consensus 167 dG~-~~~~~~~~~~~~~~~~G~nGIv~~-pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 167 DGK-TVSTFAWESGNGGQRPGYSGITFD-PHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp TSC-CEEEEEECCCCSSSCCSCSEEEEE-TTTTEEEEESSSSSEEEEECS
T ss_pred CCC-EEeeeeecCCCcccccCcceEEEe-CCCCEEEEEcCCCeEEEEcCC
Confidence 643 222221 112236789999 899888888779999999976
No 260
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.15 E-value=0.0022 Score=58.29 Aligned_cols=205 Identities=7% Similarity=-0.112 Sum_probs=116.9
Q ss_pred cCCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeE--EEEeeecccCCcceEEEEECCCCCEE-EEEeCCCeEEEE
Q 017421 121 DQTTSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWK--IQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIV 196 (372)
Q Consensus 121 ~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vw 196 (372)
......+.+++|++.+..|... ...+.|+.+++..... ..... .......+..+++.+.+..| ++-...+.|.+.
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEE-ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEE-EeCCCCCcccEEEEecCCceEEEECCCCeEEEE
Confidence 3345678899999866555544 4567888888865210 01111 11122357789998854444 444557889999
Q ss_pred ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCeEE
Q 017421 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNT 274 (372)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~ 274 (372)
+++......+... .......|+++|.+..|+.... .+.|...++........+...-.....
T Consensus 187 ~~~g~~~~~l~~~----------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 187 DTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp CTTTCSEEEEEEC----------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEE
T ss_pred eCCCCceEEEEeC----------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEE
Confidence 9876543322210 1125788999997666655442 367999998754433333333457789
Q ss_pred EEEeCCCCCEEEEEe-CCCeEEEEeccccc--------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421 275 VCFGDESGHLIYSGS-DDNLCKVNSVLLLT--------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR 345 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~ 345 (372)
|+++ +++..|+.+. ..+.|..+|+.-.. .......++++. +..|+.+. ...+.|..++..+|+
T Consensus 251 lavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd-----~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 251 ITLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTD-----IINEAIFSANRLTGS 322 (400)
T ss_dssp EEEE-TTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEE-----SSSCSEEEEESSSCC
T ss_pred EEEE-eCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEec-----CCCCeEEEEEcCCCC
Confidence 9999 6666666554 56789998875211 112234455552 33333331 023556666666665
Q ss_pred EEEEE
Q 017421 346 TFYSF 350 (372)
Q Consensus 346 ~~~~~ 350 (372)
.+..+
T Consensus 323 ~~~~i 327 (400)
T 3p5b_L 323 DVNLL 327 (400)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 44433
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.10 E-value=0.0022 Score=57.12 Aligned_cols=178 Identities=8% Similarity=0.033 Sum_probs=108.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCce
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTM 203 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 203 (372)
....|.+..++ .+|+.+.. ..|+..++........ .... ..+..++|++....|+.+. ..+.|..+++..+..
T Consensus 34 d~~~C~~~~~~-~~ll~~~~-~~I~~i~~~g~~~~~~---~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 34 DRRSCKALGPE-PVLLFANR-IDIRQVLPHRSEYTLL---LNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp TSSCEEESSSC-CEEEEECB-SCEEEECTTSCCEEEE---ECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcccccccC-ceeEeecc-cceEEEeCCCCeeEEe---ecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCc
Confidence 33455555563 44444433 5688888876533221 1222 2478999998666666554 578899999887653
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCC
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 282 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 282 (372)
...... .......+++.+.+..| ++-...+.|.+.++........+.........++++|.++
T Consensus 108 ~~~~~~----------------~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 108 EEVVST----------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 171 (349)
T ss_dssp EEEECS----------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT
T ss_pred eEEEeC----------------CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC
Confidence 322110 01135678888755444 5555678899999875543333333445678999993355
Q ss_pred CEEEEEeCC-CeEEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 283 HLIYSGSDD-NLCKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 283 ~~l~s~~~d-g~i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.++++-... +.|..+++.- + ...-.....++|+|++..|+.+
T Consensus 172 ~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEE
T ss_pred eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEE
Confidence 455554445 7888888751 1 1233457899999988777766
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.08 E-value=0.0032 Score=62.16 Aligned_cols=161 Identities=8% Similarity=-0.054 Sum_probs=98.5
Q ss_pred CCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeE--EEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEE
Q 017421 122 QTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWK--IQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVD 197 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd 197 (372)
.....+.+++|++.+..| ++-...+.|+.+++..... ..... .......+..|++.+.++.|+.+ ...+.|.+.+
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v-i~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE-EecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 345667889999855544 4555567888888875311 11111 12122346789999877655554 4578899999
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEANKLSLRILAHTSDVNTV 275 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~ 275 (372)
+.......+.. . .......|+++|.+.+|+... .. +.|.+.++........+...-.....|
T Consensus 500 ldG~~~~~l~~--~--------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GL 563 (791)
T 3m0c_C 500 TKGVKRKTLFR--E--------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 563 (791)
T ss_dssp TTSSSEEEEEE--C--------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEE
T ss_pred CCCCeEEEEEe--C--------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEE
Confidence 98654322221 0 112578999999866665544 33 789999987544433334344578899
Q ss_pred EEeCCCCCEEEEE-eCCCeEEEEecc
Q 017421 276 CFGDESGHLIYSG-SDDNLCKVNSVL 300 (372)
Q Consensus 276 ~~sp~~~~~l~s~-~~dg~i~vwd~~ 300 (372)
+++ +.+..|+.+ ...+.|...++.
T Consensus 564 avD-~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 564 TLD-LLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EEE-TTTTEEEEEETTTTEEEEEETT
T ss_pred EEe-cCCCeEEEEeCCCCcEEEEecC
Confidence 999 555555555 456778888875
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00025 Score=65.21 Aligned_cols=155 Identities=10% Similarity=0.073 Sum_probs=97.0
Q ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-C----eEEEEEC
Q 017421 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-P----IVHIVDV 198 (372)
Q Consensus 125 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~vwd~ 198 (372)
.....++++| ++..|.++...+.|+.+|+..+... ... ........++|++++++|+++... + .+.+.+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~---~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVY---SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEE---CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEe---cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 3567889998 4555655555588999999876432 221 123358899999999966666542 2 2333443
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEee-cCCCCeEEEE
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVC 276 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~ 276 (372)
.+.......+.. ......++++| ++.++++-..++.|..++...+....... ........++
T Consensus 213 -~g~~~~~~~l~~---------------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia 276 (430)
T 3tc9_A 213 -ESGFKVITELTK---------------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQ 276 (430)
T ss_dssp -GGTSCSEEEEEE---------------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEE
T ss_pred -CCceeeeeeecc---------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEE
Confidence 232211111100 01356788999 67766776678899999998776422222 1224578999
Q ss_pred EeCCCCCEEEEE-eCCCeEEEEecc
Q 017421 277 FGDESGHLIYSG-SDDNLCKVNSVL 300 (372)
Q Consensus 277 ~sp~~~~~l~s~-~~dg~i~vwd~~ 300 (372)
|+ ++|++|+.+ ...+.|..++..
T Consensus 277 ~~-pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 277 FH-PSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EC-TTSSEEEEEETTTTEEEEEEEE
T ss_pred Ec-CCCCEEEEEECCCCEEEEEeCC
Confidence 99 999955554 467889998765
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.06 E-value=0.00029 Score=68.53 Aligned_cols=117 Identities=13% Similarity=0.126 Sum_probs=72.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC-CCeEEE
Q 017421 129 VSQFSA-DGSLFVAGFQAS-----------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHI 195 (372)
Q Consensus 129 ~~~~s~-~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v 195 (372)
.+++.+ +++.++.|+.+. .+.+||+.++.-.........+.....++++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 5889999876422211111222222345778889999999885 458999
Q ss_pred EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CC-----CeEEEEECCCCe
Q 017421 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-----DCIYVYDLEANK 260 (372)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~d-----g~i~iwd~~~~~ 260 (372)
||..+.+........... .-.+++..+++++++.|+ .+ ..+.+||..+++
T Consensus 270 yd~~t~~W~~~~~~~~~R---------------~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVAR---------------GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCC---------------SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccc---------------cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 999877644332211110 112344456788887777 33 457888887654
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.06 E-value=0.0011 Score=65.62 Aligned_cols=155 Identities=10% Similarity=0.079 Sum_probs=84.7
Q ss_pred EEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC---CCeEEEEECC
Q 017421 128 YVSQFSADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---SPIVHIVDVG 199 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~ 199 (372)
..++|+|||+.|+....+ ..|+++++.++..................+.|+||+++|+..+. ...|+++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 467899999988877664 26888888765321111111122223567899999999887653 3468889988
Q ss_pred CCceee-ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeEEEE-eecCCCC--
Q 017421 200 SGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLR-ILAHTSD-- 271 (372)
Q Consensus 200 ~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i~iwd~~~~~~~~~-~~~~~~~-- 271 (372)
++.... ...+.. +.......+.|+..+.+++....+ ..|..+|+.++..... +..+...
T Consensus 304 ~~~~~~~~~~l~~-------------~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~ 370 (751)
T 2xe4_A 304 KGNAHNTLEIVRP-------------REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVF 370 (751)
T ss_dssp SCTTCCCEEESSC-------------CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEE
T ss_pred CCCCCceeEEeec-------------CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcE
Confidence 752111 011110 111244555555444444444333 3677788765311122 2334333
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEE
Q 017421 272 VNTVCFGDESGHLIYSGSDDNLCKVN 297 (372)
Q Consensus 272 v~~~~~sp~~~~~l~s~~~dg~i~vw 297 (372)
+..+.+. .+.++++...++..++|
T Consensus 371 l~~~~~~--~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 371 MESIAVR--SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEEEEC--SSEEEEEEEETTEEEEE
T ss_pred EEEEEEE--CCEEEEEEEeCCEEEEE
Confidence 4445553 44566667777764444
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.03 E-value=0.0031 Score=55.22 Aligned_cols=165 Identities=10% Similarity=-0.004 Sum_probs=99.1
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCC----ceeeecceeec
Q 017421 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSG----TMESLANVTEI 212 (372)
Q Consensus 138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~ 212 (372)
+|+.+.. ..|+..++........ .. ....+.+++|++++..|+.+ ...+.|..+++.+. ....... .
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~---~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--~- 74 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSL---IP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--R- 74 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEE---EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC--S-
T ss_pred EEEEECC-CeEEEEECCCcceEeh---hc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe--C-
Confidence 4444444 5689999887643322 11 22357899999876666555 44688999998762 1111110 0
Q ss_pred ccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC-
Q 017421 213 HDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD- 290 (372)
Q Consensus 213 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~- 290 (372)
.......+++++.+..| ++-...+.|.++++........+.........++++ |.+..|+.+..
T Consensus 75 -------------~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavd-p~~g~ly~~d~~ 140 (316)
T 1ijq_A 75 -------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWG 140 (316)
T ss_dssp -------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECS
T ss_pred -------------CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeC-CCCCEEEEEccC
Confidence 01145678888755444 555667899999987554433333344577899999 64444444443
Q ss_pred C-CeEEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 291 D-NLCKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 291 d-g~i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
. +.|...++.- + ...-.....++++|++..|+.+
T Consensus 141 ~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 141 TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp SSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEE
Confidence 3 6788887651 1 1233467899999988777765
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.03 E-value=0.00052 Score=65.63 Aligned_cols=191 Identities=13% Similarity=0.071 Sum_probs=110.1
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CcEEEEeCCCCeEEEEeeecccC-------CcceEEEEE
Q 017421 129 VSQFSADGSLFVAGFQ--------------------A----SQIRIYDVERGWKIQKDILAKSL-------RWTVTDTSL 177 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~--------------------d----g~i~vwd~~~~~~~~~~~~~~~~-------~~~v~~~~~ 177 (372)
.++++|+..++.++.. | +.|..+|..+++.+......... ..++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4577787777776653 2 58999999999777654332110 11221 222
Q ss_pred C-CCCC---EEEEEeCCCeEEEEECCCCceeeecceeecc---c------cc-----ceec-----------------cC
Q 017421 178 S-PDQR---HLVYASMSPIVHIVDVGSGTMESLANVTEIH---D------GL-----DFSA-----------------AD 222 (372)
Q Consensus 178 ~-~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~------~~-----~~~~-----------------~~ 222 (372)
. .+|+ .++.++.+|.++++|..+|+.+......... . +. .+.+ ..
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 2 4664 6788899999999999999875443322100 0 00 0111 00
Q ss_pred CCCccccEEEEEEcCCCCEEEEEe---------------------------------CCCeEEEEECCCCeEEEEeecCC
Q 017421 223 DGGYSFGIFSLKFSTDGRELVAGS---------------------------------SDDCIYVYDLEANKLSLRILAHT 269 (372)
Q Consensus 223 ~~~h~~~i~~~~~sp~~~~l~s~s---------------------------------~dg~i~iwd~~~~~~~~~~~~~~ 269 (372)
.+++. -..++++|+..++++.. .+|.|..||+.+++.+.+....
T Consensus 409 ~Gg~~--w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~- 485 (582)
T 1flg_A 409 LGGKN--WNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH- 485 (582)
T ss_dssp TCSSC--SSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-
T ss_pred ccccC--CCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-
Confidence 01110 11356666655444332 2578999999999988776633
Q ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCe--eEEEeccCCCeEEEE
Q 017421 270 SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPC--NKYLFNPCNKYLIIY 324 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v--~~~~~s~~g~~l~~~ 324 (372)
.++..-... ..+.+++.++.|+.++.||.++.+ .....+ .-+.|..+|+..++.
T Consensus 486 ~~~~~g~~~-tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 486 LPLWAGVLA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp SCCCSCCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCcccceE-eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 222222222 346678889999999999987544 111222 225667788754443
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.99 E-value=0.00059 Score=65.11 Aligned_cols=192 Identities=15% Similarity=0.053 Sum_probs=110.8
Q ss_pred EEEECCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEeeeccc-------CCcceEEEEECCCCC---
Q 017421 129 VSQFSADGSLFVAGFQA----------------SQIRIYDVERGWKIQKDILAKS-------LRWTVTDTSLSPDQR--- 182 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~--- 182 (372)
.+++.++...+..+..+ +.|..+|..+++.+........ ...++. +...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 35677776677666532 3599999999977665433211 112221 22224674
Q ss_pred EEEEEeCCCeEEEEECCCCceeeecceeecc---------ccc----------------ceeccCCCCccccEEEEEEcC
Q 017421 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIH---------DGL----------------DFSAADDGGYSFGIFSLKFST 237 (372)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~----------------~~~~~~~~~h~~~i~~~~~sp 237 (372)
.++.++.+|.++++|..+++.+......... .+. ...+...+++. -..++++|
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~dp 395 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN--QGVDSYDP 395 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEET
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccC--CCCceECC
Confidence 5677888999999999999875443321100 000 00011111111 12467788
Q ss_pred CCCEEEEEe-------------------------------------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC
Q 017421 238 DGRELVAGS-------------------------------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (372)
Q Consensus 238 ~~~~l~s~s-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 280 (372)
+..++++.. .+|.|..||+.+++.+.++... ..+....+. .
T Consensus 396 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~-t 473 (571)
T 2ad6_A 396 ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY-T 473 (571)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE-E
T ss_pred CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEE-E
Confidence 877776553 2478999999999988777632 233333333 3
Q ss_pred CCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEEe
Q 017421 281 SGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 281 ~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
.+..++.++.|+.|+.||.++.+ .......-+.+..+|+.++...
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 45677778999999999987543 1111112244567777666553
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.98 E-value=0.0024 Score=56.02 Aligned_cols=200 Identities=9% Similarity=-0.039 Sum_probs=115.4
Q ss_pred CceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEE-EEEeCCCeEEEEECCCCc
Q 017421 125 SRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~ 202 (372)
..+.+++|++.+..| .+-...+.|..+++.......... ..+ -..+..+++.+.+..| ++-...+.|.++++....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EEC-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cCC-CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 356788999855444 555566789999987652211111 111 1246788898755544 444557889999987644
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 280 (372)
...+.. . .......++++|.+..|+.+. ..+.|...++............-.....++++ +
T Consensus 113 ~~~l~~--~--------------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd-~ 175 (318)
T 3sov_A 113 RKVLFW--Q--------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLD-Y 175 (318)
T ss_dssp CEEEEC--S--------------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEE-T
T ss_pred EEEEEe--C--------------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEe-c
Confidence 322211 0 112578899999766665554 25789988886433222222333467899999 6
Q ss_pred CCCEEEEE-eCCCeEEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421 281 SGHLIYSG-SDDNLCKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSF 350 (372)
Q Consensus 281 ~~~~l~s~-~~dg~i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~ 350 (372)
++..|+.+ +..+.|..+|+.- + .........+++..+ .++.+. ...+.|...+..+|+....+
T Consensus 176 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~--~lywtd-----~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 176 EEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTD-----WSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT--EEEEEE-----TTTTEEEEEETTTCCSCEEE
T ss_pred cCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC--EEEEEe-----cCCCeEEEEECCCCCceEEE
Confidence 55555554 4567899998751 1 112334556666432 333221 02366677777666654433
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.98 E-value=0.0022 Score=57.95 Aligned_cols=175 Identities=7% Similarity=0.009 Sum_probs=105.2
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCceeee
Q 017421 128 YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESL 206 (372)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~ 206 (372)
.|.+..+ ..+|+.+.. ..|+.+++........ ... ...+..++|++.+..|+.+ ...+.|..+++..+.....
T Consensus 80 ~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~---~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLL---LNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp CEEECSS-CCEEEEECB-SCEEEECTTSCCCEEE---ECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred eECCccc-cceeEeecC-ccceeeccCCCcEEEE---ecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 3445555 344444443 5688888876532221 112 2247899999866666554 4578899999887653322
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEE
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 285 (372)
.... ......+++.+.+..| ++-...+.|.+.++........+.........+++.|..+.++
T Consensus 154 ~~~~----------------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 154 VSTG----------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp ECSS----------------CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EeCC----------------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEE
Confidence 2100 0134568888755444 5555677899998875543333333445678999993344444
Q ss_pred EEEeCC-CeEEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 286 YSGSDD-NLCKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 286 ~s~~~d-g~i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
++-... +.|..+++.- + ...-.....++|+|++..|+.+
T Consensus 218 ~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 218 WTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEE
T ss_pred EeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEE
Confidence 444344 6788888751 1 1223456889999887777766
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.97 E-value=0.00099 Score=63.57 Aligned_cols=202 Identities=12% Similarity=0.089 Sum_probs=116.1
Q ss_pred CEEEEEeC------CCcEEEEeCCCCeEEEEeeecccC----------------------------------Cc-ceEEE
Q 017421 137 SLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSL----------------------------------RW-TVTDT 175 (372)
Q Consensus 137 ~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~----------------------------------~~-~v~~~ 175 (372)
..+++++. ++.|..+|..+++.+.+....... .. ....+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 45555554 789999999999776654322110 00 00235
Q ss_pred EECCCCCEEEEEeCC----------------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCC
Q 017421 176 SLSPDQRHLVYASMS----------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (372)
Q Consensus 176 ~~~~~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 239 (372)
++.++...++.++.+ +.|..+|.++++.+-...... +....+. ....++. +...++|
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~-~d~~d~~-----~~~~p~l-~~~~~~G 313 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP-HDEWDFA-----GVNQMVL-TDQPVNG 313 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST-TCSSCCC-----CCCCCEE-EEEEETT
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC-Ccccccc-----cCCCCEE-EecccCC
Confidence 667766677766532 359999999998754333210 0000000 0112222 2333567
Q ss_pred C---EEEEEeCCCeEEEEECCCCeEEEEeecCC-------------CCe--------------------------EEEEE
Q 017421 240 R---ELVAGSSDDCIYVYDLEANKLSLRILAHT-------------SDV--------------------------NTVCF 277 (372)
Q Consensus 240 ~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~ 277 (372)
+ .++.++.+|.+.++|..+++.+....... .++ ..+++
T Consensus 314 ~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~ 393 (571)
T 2ad6_A 314 KMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSY 393 (571)
T ss_dssp EEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEE
T ss_pred cEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceE
Confidence 4 57788889999999999998877654221 111 23577
Q ss_pred eCCCCCEEEEEe-------------------------------------CCCeEEEEeccccc-----CCCCCeeEEEec
Q 017421 278 GDESGHLIYSGS-------------------------------------DDNLCKVNSVLLLT-----RSINPCNKYLFN 315 (372)
Q Consensus 278 sp~~~~~l~s~~-------------------------------------~dg~i~vwd~~~~~-----~~~~~v~~~~~s 315 (372)
+ |+..++++.. .+|.|..||+.+.+ .....+.+..+.
T Consensus 394 d-p~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~ 472 (571)
T 2ad6_A 394 D-PESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLY 472 (571)
T ss_dssp E-TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEE
T ss_pred C-CCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEE
Confidence 7 5555665543 34678888876443 111222222222
Q ss_pred cCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421 316 PCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMV 352 (372)
Q Consensus 316 ~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~ 352 (372)
..+..+++++ .|+.++.+|..+|+++..+..
T Consensus 473 t~gg~v~~g~------~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 473 TKGGLVWYAT------LDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp ETTTEEEEEC------TTSEEEEEETTTCCEEEEEEC
T ss_pred ECCCEEEEEc------CCCeEEEEECCCCCEEEEEeC
Confidence 2344454443 578889999999988887753
No 272
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.96 E-value=0.0079 Score=59.78 Aligned_cols=191 Identities=8% Similarity=0.020 Sum_probs=122.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeec-----ccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-----KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 198 (372)
...|.++...++|++.+ |+.++-|..|+..++....-.... .-....|.++...++++.|..|+.++-|.+||.
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 45699999999988554 666667999998776432211110 011246889998888885666777777999999
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec------CCCCe
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA------HTSDV 272 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~v 272 (372)
.+++........ . ......|.++...++|++.+.. . +.+.+||..+++....... ....|
T Consensus 435 ~~~~~~~~~~~~---~---------~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i 500 (795)
T 4a2l_A 435 NSGQVENFNQRN---S---------QLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQI 500 (795)
T ss_dssp TTCCEEEECTTT---S---------CCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCE
T ss_pred CCCcEEEeecCC---C---------CcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceE
Confidence 887653322100 0 0123479999999888866554 4 4588899987764322211 23578
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----------CCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----------RSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
.++... ++|++.+.. . +-|..||..+.. .....|.++...++|++.++... .+..||
T Consensus 501 ~~i~~d-~~g~lWigt-~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d 568 (795)
T 4a2l_A 501 TTLFRD-SHKRLWIGG-E-EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFN 568 (795)
T ss_dssp EEEEEC-TTCCEEEEE-S-SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEE
T ss_pred EEEEEC-CCCCEEEEe-C-CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeEC
Confidence 899887 788766654 3 447778764211 12346888998899886665543 455555
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.93 E-value=0.00091 Score=65.15 Aligned_cols=169 Identities=14% Similarity=0.137 Sum_probs=105.3
Q ss_pred EEEECCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEeeecccCC-------cceEEEEECCCCC
Q 017421 129 VSQFSADGSLFVAGFQAS-------------------QIRIYDVERGWKIQKDILAKSLR-------WTVTDTSLSPDQR 182 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 182 (372)
.++++|+..+++.+..++ .|..+|..+++.+....... |. .++....+..+++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-CccccccCCCCcEEEEeccCCc
Confidence 578889888888887665 39999999997766544321 21 2222223333565
Q ss_pred ---EEEEEeCCCeEEEEECCCCceeeecceeecc--------cc-------c-------ceeccCCCCccccEEEEEEcC
Q 017421 183 ---HLVYASMSPIVHIVDVGSGTMESLANVTEIH--------DG-------L-------DFSAADDGGYSFGIFSLKFST 237 (372)
Q Consensus 183 ---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--------~~-------~-------~~~~~~~~~h~~~i~~~~~sp 237 (372)
.++.++.+|.++++|..+|+.+......... .+ . ...+...+++. -..++++|
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~--w~~~a~dp 390 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHN--WHSMSFNP 390 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSC--SSCCEEET
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccC--CCcceECC
Confidence 6888899999999999999875332211100 00 0 00000011111 11267777
Q ss_pred CCCEEEEEe------------------------------------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCC
Q 017421 238 DGRELVAGS------------------------------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES 281 (372)
Q Consensus 238 ~~~~l~s~s------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 281 (372)
+...++... .+|.|..||+.+++.+.+...+ .+.....+. ..
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~-t~ 468 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLS-TA 468 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE-ET
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeE-eC
Confidence 766655421 2378999999999988777643 333334444 56
Q ss_pred CCEEEEEeCCCeEEEEecccc
Q 017421 282 GHLIYSGSDDNLCKVNSVLLL 302 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~~~ 302 (372)
+.++++++.|+.|+.||.++.
T Consensus 469 gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp TTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEECCcccchhhhhhcC
Confidence 778888999999999998754
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.93 E-value=0.002 Score=59.11 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=91.7
Q ss_pred CceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC-----eEEEEE
Q 017421 125 SRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-----IVHIVD 197 (372)
Q Consensus 125 ~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd 197 (372)
....+++|+|+ +..|..+...+.|+.+++.++..... . .....+..++|+++++ |+.+...+ .+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~---~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-T---TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-C---CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-e---cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 35678999995 44455544448899999977743322 1 2223588999999999 44444321 132233
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEee--cCCCCeEE
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNT 274 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~ 274 (372)
...+... ..... .......++++| +|.++++-..++.|+.+|..++.....+. +.......
T Consensus 214 ~~~~~~~-~~~~~---------------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 214 RASGFTE-RLSLC---------------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp GGGTTCC-EEEEE---------------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred CCCCeec-ccccc---------------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 2211110 00000 011456688899 67766666677899999998776522322 11223357
Q ss_pred EEEeCCCCCEEEEE-eCCCeEEEEecc
Q 017421 275 VCFGDESGHLIYSG-SDDNLCKVNSVL 300 (372)
Q Consensus 275 ~~~sp~~~~~l~s~-~~dg~i~vwd~~ 300 (372)
++|+ ++++.|+.+ ...+.|+.+++.
T Consensus 278 ia~d-pdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 278 IVWH-PTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEC-TTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEe-CCCCEEEEEeCCCCEEEEEeCC
Confidence 9999 888855555 456889998854
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.89 E-value=0.0026 Score=58.37 Aligned_cols=160 Identities=14% Similarity=0.222 Sum_probs=92.2
Q ss_pred CCCCceEEEEECCCCCEEEEEeCC---C-cEEEEeCCCCeEEEEeeecccCCcceEEEEECC-CCCEEEEEeCCCeEEEE
Q 017421 122 QTTSRAYVSQFSADGSLFVAGFQA---S-QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (372)
Q Consensus 122 ~~~~~v~~~~~s~~~~~l~~~~~d---g-~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 196 (372)
.......+++++++|+++++.... . .+..++...+....... .. ......++++| ++.++++-..++.|+.+
T Consensus 179 ~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~--~~-~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 179 TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSL--CN-ARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEE--EE-CSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccc--cc-cCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 345568999999999955544321 1 13333332221100111 11 12366789999 66655555567889999
Q ss_pred ECCCCce-eeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECC--CCeE--EEEeecC--
Q 017421 197 DVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLE--ANKL--SLRILAH-- 268 (372)
Q Consensus 197 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~--~~~~--~~~~~~~-- 268 (372)
|..++.. ....... .......++|+|+++.| ++-...+.|..++.. ++.. ...+.+.
T Consensus 256 d~~~g~~~~~~~~~~---------------~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g 320 (433)
T 4hw6_A 256 DPATGTLTEEEVMMD---------------TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHS 320 (433)
T ss_dssp CTTTCCEEEEEEECS---------------CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTT
T ss_pred ECCCCeEEEEEeccC---------------CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCC
Confidence 9987764 2111100 01123469999999855 454556889998865 2321 1222221
Q ss_pred -------------CCCeEEEEE---------eCCCCCEEEEEeCCCeEEEEecc
Q 017421 269 -------------TSDVNTVCF---------GDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 269 -------------~~~v~~~~~---------sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
-.....+++ . ++|.++++-...+.|+.++..
T Consensus 321 ~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 321 SPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp CCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTT
T ss_pred CCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCC
Confidence 124667888 5 777777776677889888853
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.86 E-value=0.009 Score=52.49 Aligned_cols=192 Identities=11% Similarity=0.116 Sum_probs=114.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC----CC---EEEEEeC---CCeEEEEECC--CCc
Q 017421 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD----QR---HLVYASM---SPIVHIVDVG--SGT 202 (372)
Q Consensus 135 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~vwd~~--~~~ 202 (372)
...+++.....+-+.|||+ .++.+.... . ..+..+..-|+ ++ ++++... +++|.+|++. ++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~---~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN---T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC---C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc---C--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 3456666667788999999 666665521 1 24555655552 22 2333333 4789999773 443
Q ss_pred eeeecce--eecccccceeccCCCCccccEEEEEE--cCC-CC-EEEEEeCCCeEEEEECC-------CCeEEEEeecCC
Q 017421 203 MESLANV--TEIHDGLDFSAADDGGYSFGIFSLKF--STD-GR-ELVAGSSDDCIYVYDLE-------ANKLSLRILAHT 269 (372)
Q Consensus 203 ~~~~~~~--~~~~~~~~~~~~~~~~h~~~i~~~~~--sp~-~~-~l~s~s~dg~i~iwd~~-------~~~~~~~~~~~~ 269 (372)
....... ... . -...+..+++ +|. ++ ++++...+|.+..|++. +.+.++++.. .
T Consensus 113 l~~i~~~~~pv~-t-----------~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-g 179 (355)
T 3amr_A 113 LQSMTDPDHPIA-T-----------AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-N 179 (355)
T ss_dssp EEECSCTTSCEE-C-----------CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-S
T ss_pred eeeccccccCcC-C-----------CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-C
Confidence 2222110 000 0 0024556666 774 44 57777888999999883 3356667664 4
Q ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cc--------cCCCCCeeEEEe--ccCCC-eEEEEeeeeEEEee
Q 017421 270 SDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LL--------TRSINPCNKYLF--NPCNK-YLIIYLILVISIYS 333 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~--------~~~~~~v~~~~~--s~~g~-~l~~~~~~~~~~~d 333 (372)
+.+..+... +....|+.+-++.-|..++.+ +. ......+..|++ .++|+ +|++++.+ +
T Consensus 180 sq~EgcvvD-d~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG-----~ 253 (355)
T 3amr_A 180 SQTEGMAAD-DEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG-----N 253 (355)
T ss_dssp SCEEEEEEE-TTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG-----G
T ss_pred CCcceEEEc-CCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC-----C
Confidence 578888888 777788888888777666644 11 112246788887 45555 66666422 4
Q ss_pred ceEEEeecc-cceEEEEEe
Q 017421 334 PNILLDNYF-LLRTFYSFM 351 (372)
Q Consensus 334 ~~i~lw~~~-~~~~~~~~~ 351 (372)
.+..+||.. +.+.+.+|.
T Consensus 254 ~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 254 SSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp TEEEEEESSTTCCEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEE
Confidence 567777775 555555553
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.83 E-value=0.0022 Score=61.38 Aligned_cols=190 Identities=13% Similarity=0.058 Sum_probs=107.9
Q ss_pred EEEECCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEeeecccC-------CcceEEEEEC-CCC---
Q 017421 129 VSQFSADGSLFVAGFQA----------------SQIRIYDVERGWKIQKDILAKSL-------RWTVTDTSLS-PDQ--- 181 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~-~~~--- 181 (372)
.+++.++..++..+..+ +.|..+|..+++.+......... ..++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 35677777777777654 37999999999776654332211 11221 2222 467
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeecceeec---------ccc----------------cceeccCCCCccccEEEEEEc
Q 017421 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEI---------HDG----------------LDFSAADDGGYSFGIFSLKFS 236 (372)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~----------------~~~~~~~~~~h~~~i~~~~~s 236 (372)
..++.++.+|.++++|.++|+.+........ ..+ ....|...+++. -..++++
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~d 401 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHN--QGHDSYD 401 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccC--CCCccCC
Confidence 4677788999999999999987544332110 000 000111111111 1235566
Q ss_pred CCCCEEEEEe---------------------------------------CCCeEEEEECCCCeEEEEeecCCCCeEEEEE
Q 017421 237 TDGRELVAGS---------------------------------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (372)
Q Consensus 237 p~~~~l~s~s---------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 277 (372)
|+..++++.. ..|.|..||+.+++.+.+... ..++..-..
T Consensus 402 p~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~ 480 (599)
T 1w6s_A 402 PKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTM 480 (599)
T ss_dssp TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCE
T ss_pred CCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcce
Confidence 6655554321 347899999999988777652 222221112
Q ss_pred eCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEE
Q 017421 278 GDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLII 323 (372)
Q Consensus 278 sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~ 323 (372)
. ..+.+++.++.|+.|+.||.++.+ .......-+.+..+|+..++
T Consensus 481 ~-tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 481 A-TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp E-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred E-ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence 2 356677789999999999988543 11111123556677764443
No 278
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.82 E-value=0.017 Score=57.31 Aligned_cols=201 Identities=10% Similarity=-0.028 Sum_probs=125.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeec-ccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 202 (372)
...|.++...++++.|-+|+.++-|.+|+..++....-.... ......|.++...+++++.+.. .+ -+.+||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe
Confidence 356899999989985566777677999998876432211100 0123468999998888766544 44 58889988776
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-------cCCCCeEEE
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-------AHTSDVNTV 275 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~ 275 (372)
........ .. ..-....|.++...++|++.+... +.+..||..+++. .+. .....|.++
T Consensus 483 ~~~~~~~~-~~---------~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i 548 (795)
T 4a2l_A 483 FTTIEKEK-DG---------TPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCI 548 (795)
T ss_dssp EEECCBCT-TC---------CBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEE
T ss_pred EEEccccc-cc---------cccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEE
Confidence 43322110 00 001224789999999998666544 4588899887765 222 123578899
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeccccc--------C-CCCCeeEEEeccCCCeEEEEeeeeEEEee---ceEEEeeccc
Q 017421 276 CFGDESGHLIYSGSDDNLCKVNSVLLLT--------R-SINPCNKYLFNPCNKYLIIYLILVISIYS---PNILLDNYFL 343 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~d---~~i~lw~~~~ 343 (372)
... ++|.+.+.. .. -|..||..+.. + ....|.++...++|++.+++. ..+..+| ..++.++...
T Consensus 549 ~~d-~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~-~Gl~~~~~~~~~~~~~~~~d 624 (795)
T 4a2l_A 549 YEA-SNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN-RGISCFNPETEKFRNFTESD 624 (795)
T ss_dssp EEC-TTSCEEEEE-SS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET-TEEEEEETTTTEEEEECGGG
T ss_pred EEC-CCCCEEEEe-CC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC-CceEEEcCCCCcEEEcCCcC
Confidence 887 788766544 33 47778865211 1 134588898899888766653 4445555 3455555444
Q ss_pred c
Q 017421 344 L 344 (372)
Q Consensus 344 ~ 344 (372)
|
T Consensus 625 G 625 (795)
T 4a2l_A 625 G 625 (795)
T ss_dssp T
T ss_pred C
Confidence 4
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.76 E-value=0.0033 Score=60.18 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=70.6
Q ss_pred CCCcEEEEeCCCCeEEEEeeecccCC----------------------------------cce-EEEEECCCCCEEEEEe
Q 017421 144 QASQIRIYDVERGWKIQKDILAKSLR----------------------------------WTV-TDTSLSPDQRHLVYAS 188 (372)
Q Consensus 144 ~dg~i~vwd~~~~~~~~~~~~~~~~~----------------------------------~~v-~~~~~~~~~~~l~~~~ 188 (372)
.++.|..+|..+++.+.+........ ..+ ..+++.++...++.++
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 37899999999997766543321110 001 1356667777788776
Q ss_pred CC----------------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEc-CCC---CEEEEEeCC
Q 017421 189 MS----------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS-TDG---RELVAGSSD 248 (372)
Q Consensus 189 ~d----------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s-p~~---~~l~s~s~d 248 (372)
.+ +.|..+|.++|+.+-...... +....+. ....++. +... .+| ..++.++.+
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~-~d~wd~d-----~~~~p~l-~d~~~~~G~~~~~v~~~~~~ 332 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP-HDEWDYA-----GVNVMML-SEQKDKDGKARKLLTHPDRN 332 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST-TCSSCCC-----CCCCCEE-EEEECTTSCEEEEEEEECTT
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC-Ccccccc-----CCCccEE-EeccccCCcEEEEEEEECCC
Confidence 65 379999999998754433211 1111110 0111222 2332 567 467778899
Q ss_pred CeEEEEECCCCeEEEEee
Q 017421 249 DCIYVYDLEANKLSLRIL 266 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~~ 266 (372)
|.+.++|.++++.+....
T Consensus 333 G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 333 GIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCEeeccc
Confidence 999999999999876654
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.76 E-value=0.011 Score=53.73 Aligned_cols=166 Identities=10% Similarity=0.000 Sum_probs=101.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCc----eeeecceee
Q 017421 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGT----MESLANVTE 211 (372)
Q Consensus 137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~----~~~~~~~~~ 211 (372)
.+|+.+.. ..|+..++........ . .....+..++|++.+..|+.+. ..+.|+.+++.... ......
T Consensus 84 ~~ll~~~~-~~I~~i~l~~~~~~~~---~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~--- 155 (400)
T 3p5b_L 84 AYLFFTNR-HEVRKMTLDRSEYTSL---I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--- 155 (400)
T ss_dssp CEEEEEET-TEEEEECTTSCSCEEE---E-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---
T ss_pred ceeEEecc-ceeEEEccCCcceeEe---c-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---
Confidence 34544443 6788888876533221 1 2223588999999766666554 46789889887532 111110
Q ss_pred cccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-
Q 017421 212 IHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS- 289 (372)
Q Consensus 212 ~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~- 289 (372)
........+++.+. ++++++-...+.|.+.++........+.........+++. |.+..|+...
T Consensus 156 -------------~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavd-p~~g~ly~td~ 221 (400)
T 3p5b_L 156 -------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDW 221 (400)
T ss_dssp -------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEE-TTTTEEEEEEC
T ss_pred -------------CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEe-cccCeEEEEeC
Confidence 01125678899884 4455555667899999998665444444444568899999 5444554444
Q ss_pred C-CCeEEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 290 D-DNLCKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 290 ~-dg~i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
. .+.|...++.- + ...-.....++++|++..|+.+
T Consensus 222 ~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence 2 36788888751 1 1233567899999888877766
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.00067 Score=62.34 Aligned_cols=136 Identities=10% Similarity=0.122 Sum_probs=86.4
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-C
Q 017421 171 TVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D 248 (372)
Q Consensus 171 ~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-d 248 (372)
....++++| ++..|+++...+.|+.+|+.++....... .......++|+++|++|+.+.. +
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----------------~~~~P~~ia~d~~G~~lyvad~~~ 200 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----------------GLSKVRTICWTHEADSMIITNDQN 200 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----------------CCSCEEEEEECTTSSEEEEEECCS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----------------CCCCcceEEEeCCCCEEEEEeCCC
Confidence 467899998 45566666555889999998776533322 1125789999999996655543 2
Q ss_pred C----eEEEEECCCCeE-EEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEecc
Q 017421 249 D----CIYVYDLEANKL-SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNP 316 (372)
Q Consensus 249 g----~i~iwd~~~~~~-~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~ 316 (372)
+ .+.+++...... ...+. .......++++|.++.++++-..++.|..++..... ........++|+|
T Consensus 201 ~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p 279 (430)
T 3tc9_A 201 NNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP 279 (430)
T ss_dssp CTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT
T ss_pred CcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC
Confidence 2 344444332111 12222 233457788993377777776678899999986221 1224568899999
Q ss_pred CCCeEEEE
Q 017421 317 CNKYLIIY 324 (372)
Q Consensus 317 ~g~~l~~~ 324 (372)
+|++|+.+
T Consensus 280 dG~~lyv~ 287 (430)
T 3tc9_A 280 SGNYAYIV 287 (430)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99977666
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.73 E-value=0.014 Score=57.84 Aligned_cols=201 Identities=11% Similarity=0.058 Sum_probs=123.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...|.++...+++++.+ |+.++-|..++..++.... ..........|.++...+++++.+ |+. +-|..||..+++.
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSC
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeE
Confidence 46789999988888655 6665678899987764322 111111234688998888876555 455 5688999887654
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec----CCCCeEEEEEeC
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA----HTSDVNTVCFGD 279 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~sp 279 (372)
........ .......|.++...++|++.+. +.++.+..||..+++.. .+.. ....|.++...
T Consensus 482 ~~~~~~~~-----------~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d- 547 (781)
T 3v9f_A 482 IHHYDTSN-----------SQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRS- 547 (781)
T ss_dssp CEEECTTT-----------SSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEEC-
T ss_pred EecccCcc-----------cccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEEC-
Confidence 32211100 0011247899999998886554 44344777998776543 3321 23468888887
Q ss_pred CCCCEEEEEeCCCeEEEEeccccc--------C-CCCCeeEEEeccCCCeEEEEeeeeEEEee---ceEEEeecccc
Q 017421 280 ESGHLIYSGSDDNLCKVNSVLLLT--------R-SINPCNKYLFNPCNKYLIIYLILVISIYS---PNILLDNYFLL 344 (372)
Q Consensus 280 ~~~~~l~s~~~dg~i~vwd~~~~~--------~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~d---~~i~lw~~~~~ 344 (372)
++|.+.+.. .+|.|..||..+.. + ....|.++...++|.+.+++. ..+..++ ..++.++...|
T Consensus 548 ~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~-~Gl~~~~~~~~~~~~~~~~dG 622 (781)
T 3v9f_A 548 SKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN-TGISCYITSKKCFYTYDHSNN 622 (781)
T ss_dssp TTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS-SCEEEEETTTTEEEEECGGGT
T ss_pred CCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC-CceEEEECCCCceEEecccCC
Confidence 778765544 46654788765321 1 123578888888888766554 3444455 45666665554
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.73 E-value=0.0035 Score=59.85 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=53.6
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CeEEEEECCCCceeeecceeecccccceeccCCCCcccc
Q 017421 174 DTSLSPDQRHLVYASM--------------------S----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFG 229 (372)
Q Consensus 174 ~~~~~~~~~~l~~~~~--------------------d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 229 (372)
.++++|+..+++.+.. | +.|..+|..+|+.+-..... .+....+.. ...+
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~-~~d~wd~~~-----~~~p 323 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHT-PNDAWDFSG-----NNEL 323 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESS-TTCCSCCCC-----CCCC
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCC-CCCcccccC-----CCCc
Confidence 3567777777777663 2 57999999999875443321 111111110 1112
Q ss_pred EEEEEEc-CCCC---EEEEEeCCCeEEEEECCCCeEEEEeec
Q 017421 230 IFSLKFS-TDGR---ELVAGSSDDCIYVYDLEANKLSLRILA 267 (372)
Q Consensus 230 i~~~~~s-p~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~ 267 (372)
+. +... .+|+ .++.++.+|.++++|.++++.+.....
T Consensus 324 ~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 324 VL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 22 2222 4674 678899999999999999998776543
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.70 E-value=0.0097 Score=52.30 Aligned_cols=183 Identities=13% Similarity=0.046 Sum_probs=101.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE-EECCCCc
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI-VDVGSGT 202 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v-wd~~~~~ 202 (372)
+..+..+.+.++++.++++. +|.|.. ..+.+....... ......+..+.+.|++.+++++. +|.+.. .|- .+.
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~ 194 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQT 194 (327)
T ss_dssp SSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCS
T ss_pred CCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCC
Confidence 45578888877777666654 454422 223343322221 23334688999999988777664 444433 332 122
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-c---CCCCeEEEEEe
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-A---HTSDVNTVCFG 278 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~---~~~~v~~~~~s 278 (372)
.-.... . +....+..+.+.++++.++. +.+|.+.+.+...++.-..+. . +...+.++.+.
T Consensus 195 tW~~~~--~-------------~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 195 AWEPHN--R-------------TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp SCEEEE--C-------------CSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred ceeECC--C-------------CCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 111110 0 12236888999999876654 457887776433233222222 1 22358899998
Q ss_pred CCCCCEEEEEeCCCeEEEEecc---c---cc---CCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421 279 DESGHLIYSGSDDNLCKVNSVL---L---LT---RSINPCNKYLFNPCNKYLIIYLILVISI 331 (372)
Q Consensus 279 p~~~~~l~s~~~dg~i~vwd~~---~---~~---~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 331 (372)
+++.+++++ .++.|. +..+ + .. .....+..+.|.++++.++++.++.+..
T Consensus 259 -~~~~~~~~g-~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~ 317 (327)
T 2xbg_A 259 -TPNEVWLAG-GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLR 317 (327)
T ss_dssp -SSSCEEEEE-STTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEE
T ss_pred -CCCEEEEEe-CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEE
Confidence 677766665 467663 2222 1 11 2245678899987777777775444433
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.01 Score=58.80 Aligned_cols=190 Identities=9% Similarity=0.036 Sum_probs=116.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...|.++...++|++. +|+.++-|..|+..++....-..........|.++...+++.+.+ |+.++-|..+|..+++.
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 3569999999888855 455555688898765422111000011234688998888877555 66667788999887764
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC-----CCCeEEEEEe
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFG 278 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s 278 (372)
...... . .....|.++...++|++.+ |+. +.|..||..+++........ ...|.++...
T Consensus 440 ~~~~~~--~------------~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 503 (781)
T 3v9f_A 440 QIIELE--K------------NELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQD 503 (781)
T ss_dssp EECCST--T------------TCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEEC
T ss_pred EEeccC--C------------CCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEc
Confidence 322210 0 1224789999888886544 454 56889998876543322222 3578899887
Q ss_pred CCCCCEEEEEeCCCeEEEEeccccc---------CCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 279 DESGHLIYSGSDDNLCKVNSVLLLT---------RSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 279 p~~~~~l~s~~~dg~i~vwd~~~~~---------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
++|.+.+. +.++-|..||..... -....|.++...++|.+.++...+.+..||
T Consensus 504 -~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d 565 (781)
T 3v9f_A 504 -SEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPS 565 (781)
T ss_dssp -TTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESC
T ss_pred -CCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEEC
Confidence 77876554 443346777765211 123468889888888876655433325555
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.66 E-value=0.0044 Score=57.47 Aligned_cols=159 Identities=11% Similarity=0.066 Sum_probs=95.7
Q ss_pred CceEEEEECCC-CC-EEEEEeCCCcEEEEeCCCCeEEEEeeec-ccCCcceEEEEE-------CCCCCEEEEEeCCC---
Q 017421 125 SRAYVSQFSAD-GS-LFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSL-------SPDQRHLVYASMSP--- 191 (372)
Q Consensus 125 ~~v~~~~~s~~-~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~-------~~~~~~l~~~~~dg--- 191 (372)
.....|+|+|. +. ++++....+.|++.|+.++.... +... ...-..+..++| +++++.|+++...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 35788999993 44 44444444678999988774332 2211 112235889999 99999777776654
Q ss_pred ----eEEEEECCC-Cceee-e--cceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECC-----
Q 017421 192 ----IVHIVDVGS-GTMES-L--ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLE----- 257 (372)
Q Consensus 192 ----~i~vwd~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~----- 257 (372)
.|.+.+... +.... . ..+... .....++++|+ +.++++-..++.|..+|+.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~---------------~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~ 282 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAY---------------KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKT 282 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEE---------------SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHH
T ss_pred ccCceEEEEecCCCCceeecccceeeccC---------------CCceEEEEcCCCCeEEEEECCCCEEEEEeccccccc
Confidence 255665433 22210 0 011000 13456788995 5556666678889999987
Q ss_pred --CCeE-----------EEE-ee-cCCCCeEEEEEeCCCCCEEEEE-eCCCeEEEEecc
Q 017421 258 --ANKL-----------SLR-IL-AHTSDVNTVCFGDESGHLIYSG-SDDNLCKVNSVL 300 (372)
Q Consensus 258 --~~~~-----------~~~-~~-~~~~~v~~~~~sp~~~~~l~s~-~~dg~i~vwd~~ 300 (372)
++.. ... +. +.....+.++|+ |+|+.|+.+ .....|+.++..
T Consensus 283 ~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~-p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 283 IKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH-PTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC-TTSSEEEEEETTTTEEEEEEEE
T ss_pred ccCceeecccccccccccceeEecCCCCCceEEEEc-CCCCEEEEEeCCCCEEEEEecC
Confidence 4543 112 11 223456899999 999965555 466788886653
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.63 E-value=0.022 Score=47.98 Aligned_cols=143 Identities=13% Similarity=0.179 Sum_probs=91.0
Q ss_pred cccCCcceEEEEECCCCCEE-EEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE
Q 017421 165 AKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV 243 (372)
Q Consensus 165 ~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~ 243 (372)
..+....+..++|+|+++.| ++...++.|...|.. ++......+.. ....-.|++.+++.+++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g---------------~~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF---------------VKDLETIEYIGDNQFVI 85 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS---------------CSSEEEEEECSTTEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC---------------CCChHHeEEeCCCEEEE
Confidence 44555579999999976655 456778899999998 66544332211 13677888889888767
Q ss_pred EEeCCCeEEEEECCCCeE---EEEee------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------c------
Q 017421 244 AGSSDDCIYVYDLEANKL---SLRIL------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------L------ 302 (372)
Q Consensus 244 s~s~dg~i~iwd~~~~~~---~~~~~------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~------ 302 (372)
+.-.++.+.++++..... +.... ........++|+ +.++.|+++.......+|.++- +
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d-~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYS-RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDK 164 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEE-TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECH
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEe-CCCCEEEEEECcCCceEEEEcccccCCceeeecch
Confidence 665678899998865432 22221 123456899999 7776666665544444544431 0
Q ss_pred ----cCCCCCeeEEEeccCCCeEEEE
Q 017421 303 ----TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 303 ----~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
......+.+++++|....+.+-
T Consensus 165 ~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp HHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred hhccccccCCceeEEEcCCCCeEEEE
Confidence 0123356899999986555544
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.61 E-value=0.0061 Score=59.18 Aligned_cols=197 Identities=14% Similarity=0.039 Sum_probs=110.7
Q ss_pred ceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CC-----CeEEEEEC
Q 017421 126 RAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MS-----PIVHIVDV 198 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~vwd~ 198 (372)
...++++.++++++++|+. +..+.+||..++.-... ......+. -.++...++++.++.|+ .+ ..+.+||.
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~-~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG-PDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC-CCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC-CCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 3445788899999999884 45899999987643221 11111222 23556667899999988 34 56999999
Q ss_pred CCCceeeec-----ceeeccc-------cc--c-------------------eeccCCC------Cc---------cccE
Q 017421 199 GSGTMESLA-----NVTEIHD-------GL--D-------------------FSAADDG------GY---------SFGI 230 (372)
Q Consensus 199 ~~~~~~~~~-----~~~~~~~-------~~--~-------------------~~~~~~~------~h---------~~~i 230 (372)
.+++...+. ....... +. . +.+.... .+ ...-
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 887654321 1110000 00 0 0000000 00 0012
Q ss_pred EEEEEcC-CCCEEEEEeCCC-----------eEEEEECCCCeEEEEe--ecCCCC-eEEEEEeCCCCCEEEEEeCC----
Q 017421 231 FSLKFST-DGRELVAGSSDD-----------CIYVYDLEANKLSLRI--LAHTSD-VNTVCFGDESGHLIYSGSDD---- 291 (372)
Q Consensus 231 ~~~~~sp-~~~~l~s~s~dg-----------~i~iwd~~~~~~~~~~--~~~~~~-v~~~~~sp~~~~~l~s~~~d---- 291 (372)
.++.|.. ++++++.|+.++ .|.+||..+.+-.... ..+... -.+++.. +++++++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l-~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVL-PDGSTFITGGQRRGIP 480 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEEC-TTSCEEEECCBSBCCT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEEC-CCCCEEEECCcccCcC
Confidence 2333433 677777877432 6888888876543332 112222 2344555 799999999854
Q ss_pred -------CeEEEEeccccc--------CCCCCeeEEEeccCCCeEEEEe
Q 017421 292 -------NLCKVNSVLLLT--------RSINPCNKYLFNPCNKYLIIYL 325 (372)
Q Consensus 292 -------g~i~vwd~~~~~--------~~~~~v~~~~~s~~g~~l~~~~ 325 (372)
..+.+||..+.. ..........+.|+|+.++.+.
T Consensus 481 ~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 481 FEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp TCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred cCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 468999986322 1112223455678999988885
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.60 E-value=0.00038 Score=68.08 Aligned_cols=202 Identities=8% Similarity=-0.085 Sum_probs=110.5
Q ss_pred CCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCC---eEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEEC
Q 017421 124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDV 198 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~ 198 (372)
...+.+++|++.+..|... ...+.|+.+++... ..... ........+..+++.+.+..|+ +-...+.|.++++
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~--~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC--BCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE--EEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 3456788999876666554 44578999998751 11111 1111112356788886554444 4345678999998
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEANKLSLRILAHTSDVNTVC 276 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~ 276 (372)
.......+... .......|+++|.+.+|+.+. .. +.|.++++........+...-.....|+
T Consensus 483 dg~~~~~l~~~----------------~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGla 546 (699)
T 1n7d_A 483 KGVKRKTLFRE----------------QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 546 (699)
T ss_dssp SSCCEEEECCC----------------SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEE
T ss_pred CCCceEEEEeC----------------CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEE
Confidence 76543322211 011356788898655554433 22 6788887764332222222234567899
Q ss_pred EeCCCCCEEEEEeCCCeEEEEecccc-----c---CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEE
Q 017421 277 FGDESGHLIYSGSDDNLCKVNSVLLL-----T---RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFY 348 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg~i~vwd~~~~-----~---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~ 348 (372)
|+|..++++++-...+.|.++++... . ........+++..+ .|+.+.- ..+.|..++..+++.+.
T Consensus 547 vd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~-----~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 547 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDI-----INEAIFSANRLTGSDVN 619 (699)
T ss_dssp ECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECS-----TTTCEEEEETTTEEEEE
T ss_pred EeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeC-----CCCeEEEEEccCCCceE
Confidence 99334555555556788999988521 1 11122344555433 3333310 13567777777776655
Q ss_pred EE
Q 017421 349 SF 350 (372)
Q Consensus 349 ~~ 350 (372)
.+
T Consensus 620 ~i 621 (699)
T 1n7d_A 620 LL 621 (699)
T ss_dssp CC
T ss_pred Ee
Confidence 44
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.58 E-value=0.019 Score=50.91 Aligned_cols=184 Identities=10% Similarity=0.038 Sum_probs=105.4
Q ss_pred ceEEEEECCCCCEEEEE------------eCCCcEEEEeCCCCe-EEEEeeecc----cCCcceEEEEECC--CCC-EEE
Q 017421 126 RAYVSQFSADGSLFVAG------------FQASQIRIYDVERGW-KIQKDILAK----SLRWTVTDTSLSP--DQR-HLV 185 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~------------~~dg~i~vwd~~~~~-~~~~~~~~~----~~~~~v~~~~~~~--~~~-~l~ 185 (372)
..-.+.+.|+|..++++ ..+|.|.++|+.+.. ......... ........+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45566778887655554 268999999987421 122221111 1223577777765 454 344
Q ss_pred EE-eC--CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---------------
Q 017421 186 YA-SM--SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--------------- 247 (372)
Q Consensus 186 ~~-~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--------------- 247 (372)
++ .. +..|.+|++..+..... ......+ ..-...+.+.+.++|++.++...
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~--~~~~~~g---------~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~ 199 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLL--HLKTIRH---------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLG 199 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEE--EEEEECC---------TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTT
T ss_pred EEECCCCCCeEEEEEEECCCCEEE--EEecccc---------CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhcc
Confidence 44 32 45777877765422111 1111111 11236889999999987777541
Q ss_pred --CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccc---cc-----CCCCCeeEEEecc
Q 017421 248 --DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLL---LT-----RSINPCNKYLFNP 316 (372)
Q Consensus 248 --dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~---~~-----~~~~~v~~~~~s~ 316 (372)
.|.|..+|. ++. ..+...-...+.++|+ ||++.|+.+. ..+.|..|++.. +. ......-.+++.+
T Consensus 200 ~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~s-pDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~ 275 (355)
T 3sre_A 200 LAWSFVTYYSP--NDV-RVVAEGFDFANGINIS-PDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDP 275 (355)
T ss_dssp CCCEEEEEECT--TCC-EEEEEEESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECT
T ss_pred CCccEEEEEEC--CeE-EEeecCCcccCcceEC-CCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeC
Confidence 244555554 332 2222233467899999 9998777665 568899999852 11 1234567788888
Q ss_pred -CCCeEEEE
Q 017421 317 -CNKYLIIY 324 (372)
Q Consensus 317 -~g~~l~~~ 324 (372)
+|++.+++
T Consensus 276 e~G~lwva~ 284 (355)
T 3sre_A 276 VTGDLWVGC 284 (355)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEe
Confidence 58877655
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.47 E-value=0.019 Score=50.16 Aligned_cols=168 Identities=9% Similarity=0.017 Sum_probs=99.4
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCceeeecceeeccccc
Q 017421 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDGL 216 (372)
Q Consensus 138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 216 (372)
+|+.+. ...|+.+++.......... ..+ ...+.++.|++.+..|+.+ ...+.|..+++..+....... ..
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~----- 76 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIV-VGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VS----- 76 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEE-EEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EE-----
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEE-ecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cC-----
Confidence 344433 3678899987652111111 111 1247789999865555544 457789999987663211110 00
Q ss_pred ceeccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe--CCCe
Q 017421 217 DFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNL 293 (372)
Q Consensus 217 ~~~~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~ 293 (372)
.......+++.+.+ +++++-...+.|.++++........+.........+++. |.+..|+.+. ..+.
T Consensus 77 ---------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavd-p~~g~ly~td~~~~~~ 146 (318)
T 3sov_A 77 ---------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPK 146 (318)
T ss_dssp ---------CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-GGGTEEEEEECSSSCE
T ss_pred ---------CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEe-CCCCEEEEEecCCCCE
Confidence 00145678888754 444555567899999987544333333444567899999 5544555444 3577
Q ss_pred EEEEeccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 294 CKVNSVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 294 i~vwd~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|...++.- + ...-.....++|+|++..|+.+
T Consensus 147 I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 147 IERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEE
Confidence 88887651 1 1223456899999987777766
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.41 E-value=0.02 Score=49.92 Aligned_cols=146 Identities=10% Similarity=0.020 Sum_probs=94.8
Q ss_pred CcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE---cCCCCEEEE
Q 017421 169 RWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF---STDGRELVA 244 (372)
Q Consensus 169 ~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~---sp~~~~l~s 244 (372)
....-++.|++....|..++ ..+.|..|+...+..... .... +.... .....+..|.| .|+++++++
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~----~s~~g----~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDG----ASSNG----DGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTT----TCCSS----CCSEEEEEEEESSSSSCCEEEEE
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCC----ccccC----CCcceeeEEEEeccCCCCcEEEE
Confidence 33456789988666666665 689999999986654333 2111 00000 01124578999 688888776
Q ss_pred Ee-------------CCCeEEEEECC---CCeEEEEee--cC-----------CCCeEEEEEeCCCCCEEEEEeCC-CeE
Q 017421 245 GS-------------SDDCIYVYDLE---ANKLSLRIL--AH-----------TSDVNTVCFGDESGHLIYSGSDD-NLC 294 (372)
Q Consensus 245 ~s-------------~dg~i~iwd~~---~~~~~~~~~--~~-----------~~~v~~~~~sp~~~~~l~s~~~d-g~i 294 (372)
.. .+..|..||+. +++.+.... .. ......++.. ++|+..++++.. +.|
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD-~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD-RDGNSYVAFALGMPAI 161 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC-TTSCEEEEEEESSCEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC-CCCCEEEeCCCCCCeE
Confidence 44 26779999999 787665543 11 1247789998 999999988877 666
Q ss_pred EEEecc----------cc-cCCCCCeeEEEeccCCCeEEEE
Q 017421 295 KVNSVL----------LL-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 295 ~vwd~~----------~~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
...+.. .. .......+.++++|+|+.|++.
T Consensus 162 ~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 162 ARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp EEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred EEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 555543 11 1122346799999999988877
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.36 E-value=0.052 Score=52.18 Aligned_cols=198 Identities=9% Similarity=-0.034 Sum_probs=112.5
Q ss_pred CCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCC
Q 017421 124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSG 201 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~ 201 (372)
...+.+++|++.+..|..+ ...+.|..+++........ ....+ -..+..+++.+.++.|+.+ ...+.|.+.++...
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~-v~~~~-~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN-VVVSG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEE-EECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEE-EEeCC-CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 4567899999976666554 4467888888875422111 11112 2358899999966655554 45789999999865
Q ss_pred ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCeEEEEEeC
Q 017421 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (372)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 279 (372)
....+.. . .......|+++|.+..|..... .+.|...++............-.....++++
T Consensus 117 ~~~~l~~--~--------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald- 179 (619)
T 3s94_A 117 LRKVLFW--Q--------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLD- 179 (619)
T ss_dssp SCEEEEC--S--------------SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEE-
T ss_pred CEEEEEe--C--------------CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEE-
Confidence 4322221 0 1124668899997655554443 4678877876433322333344567899999
Q ss_pred CCCCEEEEE-eCCCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421 280 ESGHLIYSG-SDDNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTF 347 (372)
Q Consensus 280 ~~~~~l~s~-~~dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~ 347 (372)
+++..|+.+ ...+.|...|+.-.. .......++++..+ .|+.+. ..++.|...|..+++..
T Consensus 180 ~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td-----~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 180 YEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTD-----WSTHSILACNKYTGEGL 247 (619)
T ss_dssp TTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEEC-----TTTCSEEEEESSSCCCC
T ss_pred ccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEec-----CCCCEEEEEECCCCccc
Confidence 655555554 456778888875211 11223345666544 444331 02355666666666544
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.31 E-value=0.054 Score=53.51 Aligned_cols=168 Identities=10% Similarity=-0.016 Sum_probs=97.1
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCceeee-cceeecccc
Q 017421 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESL-ANVTEIHDG 215 (372)
Q Consensus 138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~-~~~~~~~~~ 215 (372)
+|+... ...|+..++........ ... ...+.+++|++....|+.+ ...+.|+.+++........ ..+..
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l---~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~---- 467 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSL---IPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---- 467 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEE---ECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----
T ss_pred cccccc-ccceeEeeccCCcceee---ecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe----
Confidence 444433 35688888875532221 112 2357899999865555544 4467888888875321000 00000
Q ss_pred cceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CC-C
Q 017421 216 LDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DD-N 292 (372)
Q Consensus 216 ~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~d-g 292 (372)
........|++.+.++.| ++-...+.|.+.++........+.........|++. +.+..|+... .. +
T Consensus 468 ---------~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVD-p~~g~LYwtD~g~~~ 537 (791)
T 3m0c_C 468 ---------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPA 537 (791)
T ss_dssp ---------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSC
T ss_pred ---------cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEe-cCCCCEEEecCCCCC
Confidence 011245678888877555 455567899999998655444444445568899999 5544454443 33 6
Q ss_pred eEEEEeccc------ccCCCCCeeEEEeccCCCeEEEE
Q 017421 293 LCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 293 ~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.|.+.++.- ....-.....|++++.+..|+.+
T Consensus 538 ~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp EEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred eEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEE
Confidence 788887751 11233567888998877777665
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.29 E-value=0.12 Score=49.80 Aligned_cols=195 Identities=9% Similarity=-0.012 Sum_probs=115.7
Q ss_pred CceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCc
Q 017421 125 SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGT 202 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 202 (372)
..+.+++|++.+..|. +-..++.|..+++..... .... ..+ ...+..+++.+.+..|+.+ ...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~-~~g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVV-EFG-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-CSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEE-eCC-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 4678999999666555 445578899998875422 1211 111 1246788898766655544 456889999987654
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 280 (372)
...+.. . .......|+++|....|+.... .+.|...++..... ..+...-.....++++ +
T Consensus 114 ~~~l~~--~--------------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD-~ 175 (628)
T 4a0p_A 114 RQVLVW--K--------------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTID-Y 175 (628)
T ss_dssp CEEEEC--S--------------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEE-T
T ss_pred EEEEEe--C--------------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEc-c
Confidence 322211 0 1125689999996555655442 56788888875433 3333345678899999 6
Q ss_pred CCCEEEEEe-CCCeEEEEecccc-----cCCCCCeeEEEeccCCCeEEEEeeeeEEEe-eceEEEeecccceEEE
Q 017421 281 SGHLIYSGS-DDNLCKVNSVLLL-----TRSINPCNKYLFNPCNKYLIIYLILVISIY-SPNILLDNYFLLRTFY 348 (372)
Q Consensus 281 ~~~~l~s~~-~dg~i~vwd~~~~-----~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~-d~~i~lw~~~~~~~~~ 348 (372)
++..|+.+. ..+.|..+|+... ........++++.. ..|+.+. | .+.|...|-.+++...
T Consensus 176 ~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~--~~ly~tD------~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 176 AKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ--DYIYWTD------WSRRSIERANKTSGQNRT 242 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET--TEEEEEE------TTTTEEEEEETTTCCSCE
T ss_pred ccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC--CEEEEec------CCCCEEEEEECCCCCceE
Confidence 666665554 5678888887521 11222334555544 2333331 2 3566666666665433
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.28 E-value=0.08 Score=46.34 Aligned_cols=180 Identities=9% Similarity=-0.058 Sum_probs=100.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...+.++.|++ +..+++ +..+.|.. ..+.++..............+..+.+.+++..++.+ .+|.|.. ..+.++.
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC
Confidence 44688999986 444554 44564433 333343333222111223346777777666655554 4554422 2222322
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeEEEEeecCCCCeEEEEEeCCC
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL--EANKLSLRILAHTSDVNTVCFGDES 281 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~sp~~ 281 (372)
-.... . ++...+..+.+.|++.+++.+...+..+-.|- .+.+.+. ......+..+.+. ++
T Consensus 154 W~~~~--~-------------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~-~~ 215 (327)
T 2xbg_A 154 WQALV--Q-------------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFT-PD 215 (327)
T ss_dssp EEEEE--C-------------SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEEC-TT
T ss_pred CEEee--c-------------CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEEC-CC
Confidence 11111 0 12236888999999988877755444444553 3444432 2345678899998 77
Q ss_pred CCEEEEEeCCCeEEEEecc---ccc----C---CCCCeeEEEeccCCCeEEEEeee
Q 017421 282 GHLIYSGSDDNLCKVNSVL---LLT----R---SINPCNKYLFNPCNKYLIIYLIL 327 (372)
Q Consensus 282 ~~~l~s~~~dg~i~vwd~~---~~~----~---~~~~v~~~~~s~~g~~l~~~~~~ 327 (372)
+.+++. +.+|.+++.+.. +.. . ....+..+.+.+++..++++..+
T Consensus 216 g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 216 GRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp SCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 776544 467888777321 111 1 22357889999988888877544
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.012 Score=54.46 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=87.0
Q ss_pred ceEEEEECC-CCCEEEEE-eCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE-------cCCCCE
Q 017421 171 TVTDTSLSP-DQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF-------STDGRE 241 (372)
Q Consensus 171 ~v~~~~~~~-~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~-------sp~~~~ 241 (372)
....|+|+| +...|+.+ ...+.|++.|+.++....+..... +.......++| +++++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-------------~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-------------IPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-------------SSCSBEEEEEECCCBTTTBCTTCE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-------------cccCCCcEEEEeecccccCCCCCE
Confidence 367899998 34444444 444679999998877654432111 01235889999 999996
Q ss_pred EEEEeCCC-------eEEEEECCC-CeEE-----EEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-------c
Q 017421 242 LVAGSSDD-------CIYVYDLEA-NKLS-----LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-------L 301 (372)
Q Consensus 242 l~s~s~dg-------~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-------~ 301 (372)
|+++...+ .|.+++... +... ..+... .....++++|.++.++++-..++.|..+|+. +
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t 285 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN 285 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC
Confidence 66665543 266665443 1211 222221 2345788884466666677788889999986 1
Q ss_pred cc-------------------CCCCCeeEEEeccCCCeEEEE
Q 017421 302 LT-------------------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 302 ~~-------------------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.. ........++|+|+|+.|+.+
T Consensus 286 g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 286 GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 11 112345789999999976666
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.13 E-value=0.046 Score=48.02 Aligned_cols=162 Identities=14% Similarity=0.169 Sum_probs=96.4
Q ss_pred CceEEEEECCC----CC---EEEEEeC---CCcEEEEeCC--CCeEEEEeeec--c--cCCcceEEEEE--CCC-CC-EE
Q 017421 125 SRAYVSQFSAD----GS---LFVAGFQ---ASQIRIYDVE--RGWKIQKDILA--K--SLRWTVTDTSL--SPD-QR-HL 184 (372)
Q Consensus 125 ~~v~~~~~s~~----~~---~l~~~~~---dg~i~vwd~~--~~~~~~~~~~~--~--~~~~~v~~~~~--~~~-~~-~l 184 (372)
+.++.+..-|+ |+ ++++... +.+|.+|++. ++ .+...... . .....+..+++ +|. ++ ++
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ya 146 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYA 146 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEE
Confidence 56777777663 22 2333333 4789999774 33 23322110 0 11134667777 774 44 57
Q ss_pred EEEeCCCeEEEEECC---CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC----
Q 017421 185 VYASMSPIVHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE---- 257 (372)
Q Consensus 185 ~~~~~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~---- 257 (372)
++...+|.+..|++. .+..... ...... -...+..+...+....|+.+-++..|+.++.+
T Consensus 147 fV~~k~G~~~q~~l~~~~~g~~~~~-lVR~f~------------lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~ 213 (355)
T 3amr_A 147 MVTGKEGEFEQYELKADKNGYISGK-KVRAFK------------MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG 213 (355)
T ss_dssp EEECSSSEEEEEEEEECTTSCEEEE-EEEEEE------------CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC
T ss_pred EEECCCCeEEEEEEEeCCCCcccce-EEEEec------------CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC
Confidence 777888999999883 3322111 000000 11267788888888899999998888888865
Q ss_pred -CCeEEEEee-cCC-CCeEEEEEe-CCCCC-EEEEEe-CCCeEEEEecc
Q 017421 258 -ANKLSLRIL-AHT-SDVNTVCFG-DESGH-LIYSGS-DDNLCKVNSVL 300 (372)
Q Consensus 258 -~~~~~~~~~-~~~-~~v~~~~~s-p~~~~-~l~s~~-~dg~i~vwd~~ 300 (372)
+++.+..+. ++- ..+..|++- .++++ +|++++ .++++.+||..
T Consensus 214 ~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 214 SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 345555442 222 368888874 14555 566655 67899999985
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.12 E-value=0.019 Score=51.59 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=79.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEE----------E-Eeeeccc----CCcceEEEEECC---CCCEEEEE
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI----------Q-KDILAKS----LRWTVTDTSLSP---DQRHLVYA 187 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~----------~-~~~~~~~----~~~~v~~~~~~~---~~~~l~~~ 187 (372)
.|..+..+|+|++||..+. ..|.|-.+..+... . ....... ...+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5777999999999998765 58999988732100 0 1111111 245799999999 46789999
Q ss_pred eCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--CCCeEEEE
Q 017421 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVY 254 (372)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--~dg~i~iw 254 (372)
..|+.|++||+........ .+... ...|..+ .....|.+++|.+++-.|...+ .+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~--~~~fg~d---~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKP--NNSFGLD---ARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCC--CSEEESC---SSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhcc--ccccCCC---cccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999987443222 11111 1112211 1225899999999886666644 77887654
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.97 E-value=0.019 Score=50.98 Aligned_cols=156 Identities=15% Similarity=0.103 Sum_probs=83.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE--EeeecccCCcceEEEEECCC---CCEEEEEeC-C-----Ce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQ--KDILAKSLRWTVTDTSLSPD---QRHLVYASM-S-----PI 192 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~ 192 (372)
-.....++|.|+|+++++ ..+|.|.+++ .+.... ..............++|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999995555 5669999998 343211 11111112335889999998 555554433 2 67
Q ss_pred EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-------------CCeEEEEECCCC
Q 017421 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDLEAN 259 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-------------dg~i~iwd~~~~ 259 (372)
|..++...+.......+.... .......| ....++|.|||.++++.+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~-----p~~~~~~h--~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGI-----PARPHGLH--SGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEE-----CCCTTCCC--CCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred EEEEEeCCCCcCceEEEEEeC-----CCCCCCCc--CCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 888887654321111111100 00001123 2357999999976666432 256666665430
Q ss_pred ------------eEEEEe-ecCCCCeEEEEEeCCCCCEEEEEeC
Q 017421 260 ------------KLSLRI-LAHTSDVNTVCFGDESGHLIYSGSD 290 (372)
Q Consensus 260 ------------~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~ 290 (372)
.....+ .++ .....++|+|.++.++++-..
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEEC
T ss_pred CCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcC
Confidence 000111 122 235678999337776665443
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.96 E-value=0.035 Score=49.33 Aligned_cols=152 Identities=11% Similarity=0.081 Sum_probs=81.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-EEEEeeecccCCcceEEEEECCC---CCEEEEEeC----C----Ce
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTSLSPD---QRHLVYASM----S----PI 192 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~----d----g~ 192 (372)
.....|+|.|+|+++++ ..+|.|++++. .+. .+...............++++|+ +..|+++.. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45788999999985554 56699999973 443 11110011112235889999997 455544432 2 56
Q ss_pred EEEEECCCCc--eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-------------CCeEEEEECC
Q 017421 193 VHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDLE 257 (372)
Q Consensus 193 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-------------dg~i~iwd~~ 257 (372)
|..|+..... ......+... + + ....| ....|+|.|||.++++.+. .|.|..++..
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~-----~-~-~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDG-----I-P-GAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEE-----E-E-CCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEECCCCcCcCccEEEEEc-----C-C-CCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 7778776541 1101101000 0 0 00123 2467999999987766432 2456666654
Q ss_pred CC---------eEEEEeecCCCCeEEEEEeCCCCCEEEEEe
Q 017421 258 AN---------KLSLRILAHTSDVNTVCFGDESGHLIYSGS 289 (372)
Q Consensus 258 ~~---------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~ 289 (372)
.. ..+. ..++ .....++|+|.+++++++-.
T Consensus 178 G~~p~~npf~~~~i~-a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 178 GRPPADNPFPNSPIW-SYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp SCCCTTSSSTTCCEE-EECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCCCcEE-EEcc-CCcceEEEeCCCCCEEEEec
Confidence 21 0111 1233 23568999933777666543
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.96 E-value=0.2 Score=48.17 Aligned_cols=169 Identities=9% Similarity=0.088 Sum_probs=102.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCceeeecceeecccc
Q 017421 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDG 215 (372)
Q Consensus 137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 215 (372)
.+|+.+ ....|+..++.+..... .....+ -..+.+++|++.+..|+.+ ..++.|..+++............
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~-~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g----- 78 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNV-AIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG----- 78 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEE-ECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-----
T ss_pred cEEEEE-eCCcEEEEECCCCCcce-EEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-----
Confidence 345444 44689999998653221 111222 2357899999976666655 45788999998765432222110
Q ss_pred cceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEE-eCCCe
Q 017421 216 LDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSG-SDDNL 293 (372)
Q Consensus 216 ~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~-~~dg~ 293 (372)
......+++.+.+..| ++-...+.|.+.++........+...-.....+++.|..|.++++- +..+.
T Consensus 79 -----------~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 79 -----------LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp -----------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred -----------CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE
Confidence 0145678888765545 5555578899999875443223334445678999994455444443 12567
Q ss_pred EEEEecc-----cccCCCCCeeEEEeccCCCeEEEE
Q 017421 294 CKVNSVL-----LLTRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 294 i~vwd~~-----~~~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
|...++. .+...-.....+++++++..|+.+
T Consensus 148 I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 148 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp EEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCceEEEECCCCCcceEEEccccCEEEEE
Confidence 7777664 112334567889999987777666
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.94 E-value=0.072 Score=46.98 Aligned_cols=153 Identities=13% Similarity=0.069 Sum_probs=84.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEee---ecccCCcceEEEEECCC---CCEEEEE-e--CCCeEE
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI---LAKSLRWTVTDTSLSPD---QRHLVYA-S--MSPIVH 194 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~---~~~l~~~-~--~dg~i~ 194 (372)
-...+.|+|.|||+++++--..|.|++++...+....... ...........++++|+ +..|... + .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 4567899999999977766548999999876553321111 11122345889999995 3444432 2 345666
Q ss_pred EEECCCCc-----eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-------------CCeEEEEEC
Q 017421 195 IVDVGSGT-----MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDL 256 (372)
Q Consensus 195 vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-------------dg~i~iwd~ 256 (372)
-|.+..+. ......+.... +. ...| ....|.|.|||.++++.+. .|.|.-.+.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~------p~-~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGI------PK-GVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEE------CC-CSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred EEEeCCCCcccccCCCcEEEEEcC------CC-CCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 66665421 10000011000 00 1123 3467999999987776442 345555555
Q ss_pred CCC---------eEEEEeecCCCCeEEEEEeCCCCCEEEEE
Q 017421 257 EAN---------KLSLRILAHTSDVNTVCFGDESGHLIYSG 288 (372)
Q Consensus 257 ~~~---------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~ 288 (372)
... ..+.. .+|. ....++|+ ++|.++++=
T Consensus 182 dG~ip~~nPf~~~~i~a-~G~R-Np~Gla~d-p~G~L~~~d 219 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYS-YGHR-NVQGLAWD-DKQRLFASE 219 (347)
T ss_dssp TSSBCTTCSSTTCCEEE-BCCS-BCCEEEEC-TTCCEEEEE
T ss_pred CCCccCCCCCCCCeEEe-eCCC-CcceEEEC-CCCCEEEEe
Confidence 422 11111 2443 45689999 688766654
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.94 E-value=0.13 Score=46.32 Aligned_cols=160 Identities=16% Similarity=0.153 Sum_probs=95.0
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeccc--CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeec-ce
Q 017421 133 SADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS--LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLA-NV 209 (372)
Q Consensus 133 s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~ 209 (372)
..+|..++.+- ++.|+.-++.... ..+...... .-..|..+..+|+|++||..+. ..|.|..+..+...... ..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 34565555543 3678877776432 222222321 1125788999999999998864 57889888744321110 00
Q ss_pred eecccccceeccC-CCCccccEEEEEEcCC---CCEEEEEeCCCeEEEEECCCCe--EEEEee---------cCCCCeEE
Q 017421 210 TEIHDGLDFSAAD-DGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEANK--LSLRIL---------AHTSDVNT 274 (372)
Q Consensus 210 ~~~~~~~~~~~~~-~~~h~~~i~~~~~sp~---~~~l~s~s~dg~i~iwd~~~~~--~~~~~~---------~~~~~v~~ 274 (372)
........|.-++ ......+|..+.|||- +..|++-..|+.|++||+.... +. .+. .....|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 0000000011110 0113468999999995 4689999999999999998521 22 222 23367889
Q ss_pred EEEeCCCCCEEEEEe--CCCeEEEE
Q 017421 275 VCFGDESGHLIYSGS--DDNLCKVN 297 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~--~dg~i~vw 297 (372)
++|. .++-.|...+ ..|.|+-.
T Consensus 185 ~~Fg-~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFS-KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEC-TTSSCEEEEECTTSCEEEEE
T ss_pred EEEc-CCCcEEEEEecCCCCCEEEE
Confidence 9998 7777777655 77877643
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.84 E-value=0.0044 Score=60.59 Aligned_cols=160 Identities=10% Similarity=0.015 Sum_probs=91.5
Q ss_pred CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCC----ceeeecceeeccccccee
Q 017421 145 ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSG----TMESLANVTEIHDGLDFS 219 (372)
Q Consensus 145 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~ 219 (372)
...|++.++........ . .....+..++|++.+..|+.+. ..+.|+.+++.+. ....... .
T Consensus 385 ~~~I~~id~~~~~~~~~---~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~--~-------- 450 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSL---I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--R-------- 450 (699)
T ss_dssp TTC-CEECTTSCCEECC---S-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC--S--------
T ss_pred ccceEEEeCCCCcceee---e-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe--C--------
Confidence 35788888876533221 1 1122477899998777666654 4578999998751 1111110 0
Q ss_pred ccCCCCccccEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC-CeEEEE
Q 017421 220 AADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD-NLCKVN 297 (372)
Q Consensus 220 ~~~~~~h~~~i~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-g~i~vw 297 (372)
.......|++.+.+ +++++-...+.|.++++........+.........++++|..+.++++-... +.|.++
T Consensus 451 ------~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 451 ------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp ------CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred ------CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 00134457777544 4445545568899999876544333333334567889983344444443233 678777
Q ss_pred eccc-----c-cCCCCCeeEEEeccCCCeEEEE
Q 017421 298 SVLL-----L-TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 298 d~~~-----~-~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
++.- + ...-.....|+|+|++..|+.+
T Consensus 525 ~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 525 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp CSSSCCCCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred eCCCCCeeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 7641 1 1223456789999987777665
No 306
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.78 E-value=0.16 Score=46.81 Aligned_cols=113 Identities=10% Similarity=0.057 Sum_probs=61.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc-----cCCcceEEEEECCC---CCEEEEEeC-------
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-----SLRWTVTDTSLSPD---QRHLVYASM------- 189 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~l~~~~~------- 189 (372)
...+.|+|.|+|+++++-...+.|++++..++.......... ........|+|+|+ +..|.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 467799999999977765444578888765553221111111 12345779999995 555544432
Q ss_pred ------CCeEEEEECCCCc--eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe
Q 017421 190 ------SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (372)
Q Consensus 190 ------dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s 246 (372)
...|..++...+. ......+.... +. ...| ....|+|.|||.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~------p~-~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGL------PS-SKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEE------CC-CSSC--CEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcC------CC-CCCC--CCCeEeECCCCeEEEEEC
Confidence 2345556554321 11111111100 00 1123 578999999998777654
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.72 E-value=0.056 Score=44.07 Aligned_cols=148 Identities=13% Similarity=0.021 Sum_probs=80.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE-----EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-----IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 200 (372)
.+..++|+|+|.+.++ .+|.+.-.+..+... ....+-..+-. ...++.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5668999999997777 667766666543100 01111111212 2578999999988877 559888777533
Q ss_pred Cceeeec-ceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------EEEEee-cCCCCe
Q 017421 201 GTMESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK------LSLRIL-AHTSDV 272 (372)
Q Consensus 201 ~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~------~~~~~~-~~~~~v 272 (372)
.....-. .-.... .+--..+..|.|.|+|.+.++. |+.+.-....++. ....+- ..-..-
T Consensus 117 ~~~~~Wl~~a~~vg----------~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~y 184 (236)
T 1tl2_A 117 SDTDNWIARATEVG----------SGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTF 184 (236)
T ss_dssp STTCCHHHHSEEEE----------CSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred CCCCceeccccEec----------cCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceE
Confidence 2211110 000000 0112368999999999877766 7775443322111 011111 111233
Q ss_pred EEEEEeCCCCCEEEEEeCCCe
Q 017421 273 NTVCFGDESGHLIYSGSDDNL 293 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~ 293 (372)
.-+.|. +++.+.++. ++.
T Consensus 185 r~l~f~-~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 185 KFLFFS-SVGTLFGVQ--GGK 202 (236)
T ss_dssp EEEEEC-TTSCEEEEE--TTE
T ss_pred EEEEEC-CCCcEEEEe--CCe
Confidence 445676 888777666 664
No 308
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.56 E-value=0.23 Score=40.44 Aligned_cols=138 Identities=12% Similarity=0.076 Sum_probs=78.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
.+..++|+|++.+.++ .+|.++-.+..+.....-... ...-+ ..+.. ....+.|.|+|.+.++ .||.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG-------~~Gw~-~F~a~~fD~~G~LYav--~dG~ 108 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIG-------NGGWN-QFQFLFFDPNGYLYAV--SKDK 108 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEE-------CSCGG-GCSEEEECTTSCEEEE--ETTE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEec-------ccccc-cceEEEECCCCCEEEe--CCCE
Confidence 5889999999987666 677776666544222111110 00000 00111 2467899999987777 4698
Q ss_pred EEEEECCCCeEE------EEe-ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------------CCCCCee
Q 017421 251 IYVYDLEANKLS------LRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------------RSINPCN 310 (372)
Q Consensus 251 i~iwd~~~~~~~------~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------------~~~~~v~ 310 (372)
|.-++-.+.... ..+ ..-=..+..|.+. |+|.+.++. |+.++-....+.. .....-.
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~-p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEeCCCcCCCCceeccccEeccCCCCceEEEEEC-CCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 887775331110 111 1111367889998 999888777 7775433222110 1112234
Q ss_pred EEEeccCCCeEEEE
Q 017421 311 KYLFNPCNKYLIIY 324 (372)
Q Consensus 311 ~~~~s~~g~~l~~~ 324 (372)
-+.|.++|.+.++.
T Consensus 186 ~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ 199 (236)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEECCCCcEEEEe
Confidence 46688888877766
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.44 E-value=0.44 Score=42.12 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=85.3
Q ss_pred CceEEEEECC--CCC--EEEEEeC--CCcEEEEeCCCCeEEEEee-ecc-cCCcceEEEEECCCCCEEEEEeC-------
Q 017421 125 SRAYVSQFSA--DGS--LFVAGFQ--ASQIRIYDVERGWKIQKDI-LAK-SLRWTVTDTSLSPDQRHLVYASM------- 189 (372)
Q Consensus 125 ~~v~~~~~s~--~~~--~l~~~~~--dg~i~vwd~~~~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~------- 189 (372)
-....+.+.+ ++. ++++-.. +.+|.+|+++.+....... ... ..-.....+.+.++|++.++...
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 4677787755 453 3444333 4678888776532111111 111 12235789999999987776541
Q ss_pred ----------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEEEEECCC
Q 017421 190 ----------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEA 258 (372)
Q Consensus 190 ----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~iwd~~~ 258 (372)
.|.|..+|. ++...... .-...+.++|+||++.|+.+. ..+.|..|++..
T Consensus 192 ~~~e~~~~~~~g~vyr~d~--~~~~~~~~-----------------~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSP--NDVRVVAE-----------------GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHHTTCCCEEEEEECT--TCCEEEEE-----------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccchhhccCCccEEEEEEC--CeEEEeec-----------------CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 244544544 32221111 112578999999998776654 568899999863
Q ss_pred -CeE--EEEeecCCCCeEEEEEeCC-CCCEEEEEeCC
Q 017421 259 -NKL--SLRILAHTSDVNTVCFGDE-SGHLIYSGSDD 291 (372)
Q Consensus 259 -~~~--~~~~~~~~~~v~~~~~sp~-~~~~l~s~~~d 291 (372)
++. ...+ ...+....+++. + +|++.+++..+
T Consensus 253 ~g~l~~~~~~-~~~g~PDGi~vD-~e~G~lwva~~~~ 287 (355)
T 3sre_A 253 NWTLTPLRVL-SFDTLVDNISVD-PVTGDLWVGCHPN 287 (355)
T ss_dssp TSCEEEEEEE-ECSSEEEEEEEC-TTTCCEEEEEESC
T ss_pred CCcEecCEEE-eCCCCCceEEEe-CCCCcEEEEecCC
Confidence 322 2233 234567788998 7 59888766544
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.44 E-value=0.22 Score=44.06 Aligned_cols=104 Identities=14% Similarity=0.218 Sum_probs=61.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---CCEEEEE-e
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAG-S 246 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l~s~-s 246 (372)
....++|.|+|++++ +...|.|.+++ .+......... . +. ........|+|+|+ +..|..+ +
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~-v-----~~-----~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELS-V-----YH-----RGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECC-C-----CC-----STTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecce-E-----ee-----cCCCCceeEEECCCCCCCCEEEEEEe
Confidence 467999999998555 55679999998 44322111111 0 00 01236789999998 4455443 3
Q ss_pred CC-----CeEEEEECCCCe-----EEE-Eee---cCCCCeEEEEEeCCCCCEEEEEe
Q 017421 247 SD-----DCIYVYDLEANK-----LSL-RIL---AHTSDVNTVCFGDESGHLIYSGS 289 (372)
Q Consensus 247 ~d-----g~i~iwd~~~~~-----~~~-~~~---~~~~~v~~~~~sp~~~~~l~s~~ 289 (372)
.. ..|..|+...+. .+. .+. ........++|. ++|.+.++.+
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~G 153 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG-PDGMLYVTTG 153 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC-TTSCEEEECC
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC-CCCCEEEEEC
Confidence 22 678888877431 121 133 111234689999 8997766643
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.25 E-value=0.24 Score=42.41 Aligned_cols=147 Identities=14% Similarity=0.084 Sum_probs=77.6
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeE--EEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCc
Q 017421 135 DGSLFVAGFQA-----SQIRIYDVERGWK--IQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGT 202 (372)
Q Consensus 135 ~~~~l~~~~~d-----g~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 202 (372)
++..++.|+.+ ..+.+||+.+... ................+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56777777754 4689999887640 1111111111222222333 56677776643 368899998876
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEeec-CCCCeEEEE
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLRILA-HTSDVNTVC 276 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~-~~~~v~~~~ 276 (372)
-.......... .+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-...-.. ....-.++.
T Consensus 140 W~~~~~~p~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 203 (301)
T 2vpj_A 140 WSMLGDMQTAR----------EGA----GLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA 203 (301)
T ss_dssp EEEEEECSSCC----------BSC----EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred EEECCCCCCCc----------ccc----eEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEE
Confidence 54332221110 011 12222 56777777654 4589999987754322111 111112233
Q ss_pred EeCCCCCEEEEEeCC-----CeEEEEeccc
Q 017421 277 FGDESGHLIYSGSDD-----NLCKVNSVLL 301 (372)
Q Consensus 277 ~sp~~~~~l~s~~~d-----g~i~vwd~~~ 301 (372)
. .++++++.|+.+ ..+.+||+.+
T Consensus 204 ~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 204 L--LNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp E--ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred E--ECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 3 256777777754 4688899863
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.16 E-value=0.16 Score=45.02 Aligned_cols=153 Identities=12% Similarity=0.064 Sum_probs=79.0
Q ss_pred CceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEee----ecccCCcceEEEEECCC---CCEEEEE-eC------
Q 017421 125 SRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPD---QRHLVYA-SM------ 189 (372)
Q Consensus 125 ~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~-~~------ 189 (372)
...+.|+|.|+|+ +++ +...|.|++++.. +....... ...........++|+|+ +..|..+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3578899999999 554 4567999999854 32211100 01111234689999996 4444443 22
Q ss_pred -CCeEEEEECCCCc--eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-------------CCeEEE
Q 017421 190 -SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYV 253 (372)
Q Consensus 190 -dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-------------dg~i~i 253 (372)
...|..|++..+. ......+.... .. .....| ....|.|.|||.++++.+. .|.|.-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~---p~--~~~~~h--~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~r 168 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQM---PK--LSTGNH--FGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVR 168 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECS---SC--CBSSSC--CCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEE
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEEC---CC--CCCCcc--cCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEE
Confidence 2356666665431 11111110000 00 000123 2356999999966555433 246777
Q ss_pred EECCCCe------------EEEEe-ecCCCCeEEEEEeCCCCCEEEE
Q 017421 254 YDLEANK------------LSLRI-LAHTSDVNTVCFGDESGHLIYS 287 (372)
Q Consensus 254 wd~~~~~------------~~~~~-~~~~~~v~~~~~sp~~~~~l~s 287 (372)
++....- ....+ .++ .....++|+|.+|+++++
T Consensus 169 i~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 169 LTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred ECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 7765320 11111 123 346789999336766554
No 313
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.06 E-value=1.1 Score=42.95 Aligned_cols=156 Identities=8% Similarity=-0.066 Sum_probs=94.5
Q ss_pred CceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCCCc
Q 017421 125 SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGT 202 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~ 202 (372)
..+.+++|++.+..|. +-...+.|..+++...... .. ....-..+..+++.+.+..|+ +-+..+.|.+.++....
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~-~v--~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ-FV--VTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE-EE--EECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 4577899998555554 4445678888888754221 11 111123467889987555454 44557889999987653
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCeEEEEEeCC
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 280 (372)
...+.. ..-.....|+++|....|..... .+.|...++............-.....|+++ +
T Consensus 426 ~~~l~~----------------~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD-~ 488 (619)
T 3s94_A 426 RKILIS----------------EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALD-Y 488 (619)
T ss_dssp CEEEEC----------------TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEE-T
T ss_pred EEEEEE----------------CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEc-c
Confidence 222211 01136789999997445544432 3678877776433322223344578899999 6
Q ss_pred CCCEEEEEe-CCCeEEEEecc
Q 017421 281 SGHLIYSGS-DDNLCKVNSVL 300 (372)
Q Consensus 281 ~~~~l~s~~-~dg~i~vwd~~ 300 (372)
++..|+.+. ..+.|..+++.
T Consensus 489 ~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp TTTEEEEEETTTTEEEEEESS
T ss_pred cCCEEEEEECCCCEEEEEecC
Confidence 665666554 45778888875
No 314
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.22 Score=43.73 Aligned_cols=117 Identities=7% Similarity=0.034 Sum_probs=69.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC--CCCCEEEEE--eCCCeEEEEECCCCceeeecceeec
Q 017421 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS--PDQRHLVYA--SMSPIVHIVDVGSGTMESLANVTEI 212 (372)
Q Consensus 137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~ 212 (372)
..+++++.||.|.-+|..+|+........ ...++....-. +.+..++.+ +.||.|..++..+|...........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 46888999999999999999777664332 11122221100 112234433 5799999999988754322211110
Q ss_pred ccccceeccCCCCccccEEE---EEE-c----CCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q 017421 213 HDGLDFSAADDGGYSFGIFS---LKF-S----TDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (372)
Q Consensus 213 ~~~~~~~~~~~~~h~~~i~~---~~~-s----p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 267 (372)
. ...++.. ... . ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus 89 v------------~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 89 V------------STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp H------------TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred e------------eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 0 0011211 000 0 1345788999999999999999999888863
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.04 E-value=0.22 Score=42.76 Aligned_cols=146 Identities=12% Similarity=0.141 Sum_probs=77.8
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC------CeEEEEECCCCcee
Q 017421 135 DGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDVGSGTME 204 (372)
Q Consensus 135 ~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~ 204 (372)
++..++.|+.+ ..+.+||+.+..-... ............+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE-ECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56677777754 5788999988743221 111121222223333 56677777654 46889999887654
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCeEEEEeec-CCCCeEE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---------DDCIYVYDLEANKLSLRILA-HTSDVNT 274 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~-~~~~v~~ 274 (372)
......... .+| ..+. .++++++.|+. -..+.+||+.+.+-...-.. ....-.+
T Consensus 132 ~~~~~p~~r----------~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 195 (306)
T 3ii7_A 132 TKPSMLTQR----------CSH----GMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHG 195 (306)
T ss_dssp EECCCSSCC----------BSC----EEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred eCCCCcCCc----------cee----EEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcce
Confidence 332221111 012 1222 25666666653 34588999988753222111 1111123
Q ss_pred EEEeCCCCCEEEEEeCC-----CeEEEEeccc
Q 017421 275 VCFGDESGHLIYSGSDD-----NLCKVNSVLL 301 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~d-----g~i~vwd~~~ 301 (372)
+... ++++++.|+.+ ..+.+||+.+
T Consensus 196 ~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 196 LVFV--KDKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp EEEE--TTEEEEECCEETTEEBCCEEEEETTT
T ss_pred EEEE--CCEEEEEeCCCCCCCCceEEEeeCCC
Confidence 3332 56777777643 3578888863
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.03 E-value=0.37 Score=42.62 Aligned_cols=141 Identities=12% Similarity=0.091 Sum_probs=76.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee-ecceeecccccceeccCCCCccccEEEEEEcCC---CCEEEEE-
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAG- 245 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l~s~- 245 (372)
....++|.|+++.|+++...|.|++++.. +.... ....... +. ........|+|+|+ +..|...
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v-----~~-----~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDV-----WA-----HGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCC-----CC-----STTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCccc-----cc-----CCCCCceeEEECCCCCCCCEEEEEE
Confidence 47899999999944455678999999853 32211 1111000 00 01235789999996 4444433
Q ss_pred eC-------CCeEEEEECCCC----eEEEE-eec------CCCCeEEEEEeCCCCCEEEEEeC-------------CCeE
Q 017421 246 SS-------DDCIYVYDLEAN----KLSLR-ILA------HTSDVNTVCFGDESGHLIYSGSD-------------DNLC 294 (372)
Q Consensus 246 s~-------dg~i~iwd~~~~----~~~~~-~~~------~~~~v~~~~~sp~~~~~l~s~~~-------------dg~i 294 (372)
+. ...|..|++..+ ..... +.. .......++|. |+|.++++.+. .|.|
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 22 235777776533 11111 111 11123579999 89976665433 2456
Q ss_pred EEEecccc-------------c-----CCCCCeeEEEecc-CCCeEEE
Q 017421 295 KVNSVLLL-------------T-----RSINPCNKYLFNP-CNKYLII 323 (372)
Q Consensus 295 ~vwd~~~~-------------~-----~~~~~v~~~~~s~-~g~~l~~ 323 (372)
.-++.... . ..-.....++|+| +|++.++
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 66665421 0 0012357899999 5655544
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.87 E-value=0.59 Score=42.91 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=61.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---CCEEEEEe-
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGS- 246 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l~s~s- 246 (372)
..+.++|.|+|+++++-...+.|++++..++.......+.... ..+ .....+..|+|+|+ +..|....
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~----~~~----~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV----NDA----DGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC----CCT----TSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc----ccc----CCCCceeEEEECCCcCcCCEEEEEEe
Confidence 4679999999997776544457888887655543222111100 000 01246789999995 45554333
Q ss_pred C------------CCeEEEEECCCC-------eEEE-Eeec-CCCCeEEEEEeCCCCCEEEEEe
Q 017421 247 S------------DDCIYVYDLEAN-------KLSL-RILA-HTSDVNTVCFGDESGHLIYSGS 289 (372)
Q Consensus 247 ~------------dg~i~iwd~~~~-------~~~~-~~~~-~~~~v~~~~~sp~~~~~l~s~~ 289 (372)
. ...|.-|+...+ +.+. .+.. .......|+|. ++|.+.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~-pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIG-PDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEEC-TTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeEC-CCCeEEEEEC
Confidence 2 235666665322 1121 1221 12346889999 8998777654
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.85 E-value=0.3 Score=41.89 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=77.2
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcee
Q 017421 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-----IVHIVDVGSGTME 204 (372)
Q Consensus 135 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 204 (372)
++..++.|+.+ ..+.+||..+..-... ............+.+ +++.++.|+.++ .+.+||+.+.+-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeC-CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 56777777654 3588999887642221 111111222222333 567777777543 5788998877654
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCeEEEE--eecCCCCeEEE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-------DCIYVYDLEANKLSLR--ILAHTSDVNTV 275 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-------g~i~iwd~~~~~~~~~--~~~~~~~v~~~ 275 (372)
......... .+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-... +... ..-.++
T Consensus 138 ~~~~~p~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~ 200 (302)
T 2xn4_A 138 HVAPMNTRR----------SSV----GVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGV 200 (302)
T ss_dssp EECCCSSCC----------BSC----EEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEE
T ss_pred ecCCCCCcc----------cCc----eEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccccE
Confidence 432221110 011 12222 56666666542 3588999987753222 2111 111233
Q ss_pred EEeCCCCCEEEEEeCC-----CeEEEEeccc
Q 017421 276 CFGDESGHLIYSGSDD-----NLCKVNSVLL 301 (372)
Q Consensus 276 ~~sp~~~~~l~s~~~d-----g~i~vwd~~~ 301 (372)
+.. ++++++.|+.+ ..+.+||+.+
T Consensus 201 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 201 GVL--NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EEE--TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred EEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 333 57777887754 3688888863
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.80 E-value=0.81 Score=39.39 Aligned_cols=150 Identities=15% Similarity=0.034 Sum_probs=77.7
Q ss_pred EEECCCCCEEEEEeC-----C------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC--------
Q 017421 130 SQFSADGSLFVAGFQ-----A------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------- 190 (372)
Q Consensus 130 ~~~s~~~~~l~~~~~-----d------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------- 190 (372)
.....+++.++.|+. . ..+.+||+.+..-. ..............+.+ +++.++.|+.+
T Consensus 40 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 116 (315)
T 4asc_A 40 SLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCL 116 (315)
T ss_dssp EEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBC
T ss_pred EEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCccc
Confidence 344457888888873 1 12778898876422 21111111111222222 56666776632
Q ss_pred CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-C-----CeEEEEECCCCeEEE-
Q 017421 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-----DCIYVYDLEANKLSL- 263 (372)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-d-----g~i~iwd~~~~~~~~- 263 (372)
..+.+||+.+.+-.......... .+| ..+. .++++++.|+. + ..+.+||+.+.+-..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r----------~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 180 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVV----------YGH----TVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL 180 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC----------BSC----EEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEEC
T ss_pred ceEEEECCCCCcEeECCCCCCcc----------cce----eEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEEC
Confidence 45889999887644332221110 011 1122 35666777765 2 358999998765322
Q ss_pred -EeecCCCCeEEEEEeCCCCCEEEEEeCCC-----eEEEEeccc
Q 017421 264 -RILAHTSDVNTVCFGDESGHLIYSGSDDN-----LCKVNSVLL 301 (372)
Q Consensus 264 -~~~~~~~~v~~~~~sp~~~~~l~s~~~dg-----~i~vwd~~~ 301 (372)
.+.. ...-.+++. -++++++.|+.++ .+.+||+.+
T Consensus 181 ~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 181 APMQT-ARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CCCSS-CCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCCCC-chhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC
Confidence 1111 111123333 3567888887654 477888763
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.69 E-value=1 Score=39.74 Aligned_cols=192 Identities=8% Similarity=-0.021 Sum_probs=95.1
Q ss_pred CCceEEEEECCC---CCEEEEEeC----C----CcEEEEeCCCC--eE--EEEee--ecccCCcceEEEEECCCCCEEEE
Q 017421 124 TSRAYVSQFSAD---GSLFVAGFQ----A----SQIRIYDVERG--WK--IQKDI--LAKSLRWTVTDTSLSPDQRHLVY 186 (372)
Q Consensus 124 ~~~v~~~~~s~~---~~~l~~~~~----d----g~i~vwd~~~~--~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~ 186 (372)
......|+++|+ +..|.++.. + ..|..|+.... .. ..... ...........+.|.|||.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356889999997 444444332 2 56777776643 11 11111 11111113567999999987666
Q ss_pred EeCC-------------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcC-CCCEEEEEeCCC---
Q 017421 187 ASMS-------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDD--- 249 (372)
Q Consensus 187 ~~~d-------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~l~s~s~dg--- 249 (372)
.+.. |.|..++.... . ..-+... ..-.+. .|+. ....++|+| +++++++-....
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~-~-p~~npf~--~~~i~a----~G~r-np~Gla~d~~~g~l~v~d~g~~~~d 222 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGR-P-PADNPFP--NSPIWS----YGHR-NPQGIDWHRASGVMVATEHGPVGHD 222 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSC-C-CTTSSST--TCCEEE----ECCS-CCCEEEECTTTCCEEEEECCSSSCC
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCC-C-CCCCCCC--CCcEEE----EccC-CcceEEEeCCCCCEEEEecCCCCCc
Confidence 4321 34554544321 0 0000000 000000 0122 345799999 677655543222
Q ss_pred eEEEEECCC--------C--------eEEEEeecCCCCeEEEEEeC------CCCCEEEEEeCCCeEEEEecccc-----
Q 017421 250 CIYVYDLEA--------N--------KLSLRILAHTSDVNTVCFGD------ESGHLIYSGSDDNLCKVNSVLLL----- 302 (372)
Q Consensus 250 ~i~iwd~~~--------~--------~~~~~~~~~~~~v~~~~~sp------~~~~~l~s~~~dg~i~vwd~~~~----- 302 (372)
.|.+..-.. + .++..+......+..++|.. .+|.++++.-..+.|...++...
T Consensus 223 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~ 302 (354)
T 3a9g_A 223 EVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRK 302 (354)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEE
T ss_pred EEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccc
Confidence 233322110 0 12223311224567788831 45666666656677877776521
Q ss_pred -----cCCCCCeeEEEeccCCCeEEEE
Q 017421 303 -----TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 303 -----~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
......+..+++.|||.+.++.
T Consensus 303 ~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 303 ISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred eeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 1123467899999999655554
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.68 E-value=1 Score=39.61 Aligned_cols=142 Identities=13% Similarity=0.096 Sum_probs=80.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC---CCEEEEE--
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAG-- 245 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~---~~~l~s~-- 245 (372)
..+.++|.|+++++++--..|.|++++...+............ . ........|+++|+ +..|...
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~-----~-----~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVS-----P-----SGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC-----C-----BTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCcee-----e-----cCCCCceeeEeccccccCCEEEEEEe
Confidence 4789999999987766554899999987665542221111000 0 12246889999995 3444332
Q ss_pred -eCCCeEEEEECCCC----------eEEE-Eeec-CCCCeEEEEEeCCCCCEEEEEeC-------------CCeEEEEec
Q 017421 246 -SSDDCIYVYDLEAN----------KLSL-RILA-HTSDVNTVCFGDESGHLIYSGSD-------------DNLCKVNSV 299 (372)
Q Consensus 246 -s~dg~i~iwd~~~~----------~~~~-~~~~-~~~~v~~~~~sp~~~~~l~s~~~-------------dg~i~vwd~ 299 (372)
..+..|.-|.+..+ +.+. .+.. .......|.|. ++|.+.++.+. .|.|.-.+.
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 23456666766541 1221 2221 11234569999 89988777542 245544454
Q ss_pred ccc-c-------------CCCCCeeEEEeccCCCeEEEE
Q 017421 300 LLL-T-------------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 300 ~~~-~-------------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
.-. . ++ .....++|+|+|.+.++=
T Consensus 182 dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEE
T ss_pred CCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEe
Confidence 311 0 11 234778999987765543
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.50 E-value=0.92 Score=38.80 Aligned_cols=144 Identities=10% Similarity=0.008 Sum_probs=75.0
Q ss_pred CEEEEEeC--CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC----CeEEEEECCCCceeeeccee
Q 017421 137 SLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVHIVDVGSGTMESLANVT 210 (372)
Q Consensus 137 ~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~ 210 (372)
.+++.|+. ...+.+||..+..-... ............+.+ ++..++.|+.+ ..+.+||+.+.+-.......
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDI-RCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEEC-CCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecC-CCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34556654 35789999987742221 111111222222332 56677777654 67889999887654332221
Q ss_pred ecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeEEEEeec-CCCCeEEEEEeCCCCC
Q 017421 211 EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------DCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGH 283 (372)
Q Consensus 211 ~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~sp~~~~ 283 (372)
... .+| ..+.+ ++++++.|+.+ ..+.+||..+.+-...-.. ....-.+++. .+++
T Consensus 90 ~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~ 151 (306)
T 3ii7_A 90 TPR----------DSL----AACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGL 151 (306)
T ss_dssp SCC----------BSC----EEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE
T ss_pred ccc----------cce----eEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCE
Confidence 111 011 12222 56677777654 4589999988753222111 1111122333 2567
Q ss_pred EEEEEeC---------CCeEEEEeccc
Q 017421 284 LIYSGSD---------DNLCKVNSVLL 301 (372)
Q Consensus 284 ~l~s~~~---------dg~i~vwd~~~ 301 (372)
+++.|+. -..+.+||+.+
T Consensus 152 iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 152 IYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EEEECCEESCTTTCEECCCEEEEETTT
T ss_pred EEEECCCCCCCCcccccceEEEeCCCC
Confidence 7777653 34578888763
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.47 E-value=0.61 Score=40.08 Aligned_cols=145 Identities=14% Similarity=0.063 Sum_probs=77.0
Q ss_pred CCCEEEEEeC----C-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCC
Q 017421 135 DGSLFVAGFQ----A-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGS 200 (372)
Q Consensus 135 ~~~~l~~~~~----d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~ 200 (372)
++.+++.|+. + ..+.+||+.+..-... ............+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPC-APMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEEC-CCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeEC-CCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 5667777765 2 4688999887642221 111111222223333 56677776543 4688899988
Q ss_pred CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEE--eecCCCCeE
Q 017421 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLR--ILAHTSDVN 273 (372)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~ 273 (372)
.+-.......... .+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-... +... ..-.
T Consensus 147 ~~W~~~~~~p~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~ 209 (308)
T 1zgk_A 147 DEWHLVAPMLTRR----------IGV----GVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI-RSGA 209 (308)
T ss_dssp TEEEECCCCSSCC----------BSC----EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-CBSC
T ss_pred CeEeECCCCCccc----------cce----EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-cccc
Confidence 7654333221111 012 12222 56677777654 4589999987753221 1111 1112
Q ss_pred EEEEeCCCCCEEEEEeCC-----CeEEEEeccc
Q 017421 274 TVCFGDESGHLIYSGSDD-----NLCKVNSVLL 301 (372)
Q Consensus 274 ~~~~sp~~~~~l~s~~~d-----g~i~vwd~~~ 301 (372)
+++.. ++++++.|+.+ ..+.+||+.+
T Consensus 210 ~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 210 GVCVL--HNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred eEEEE--CCEEEEEeCCCCCCccceEEEEeCCC
Confidence 33332 56777777654 4588899863
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.38 E-value=0.4 Score=41.01 Aligned_cols=145 Identities=11% Similarity=0.040 Sum_probs=74.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 017421 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (372)
Q Consensus 135 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 204 (372)
+++.++.|+.+ ..+.+||+.+..-... ............+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSML-GDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEE-EECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEEC-CCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 57777777653 3688999887643221 111111112222223 56777777654 46889999887654
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecC-CCCeEEEEEe
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLRILAH-TSDVNTVCFG 278 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s 278 (372)
......... .....+.+ ++++++.|+.+ ..+.+||+.+.+-...-... ...-.+++.
T Consensus 189 ~~~~~p~~r--------------~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 251 (301)
T 2vpj_A 189 NVTPMATKR--------------SGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV- 251 (301)
T ss_dssp EECCCSSCC--------------BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred eCCCCCccc--------------ccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-
Confidence 432221110 01122222 56677777654 46899999877643221111 111112222
Q ss_pred CCCCCEEEEEeCCC-----eEEEEecc
Q 017421 279 DESGHLIYSGSDDN-----LCKVNSVL 300 (372)
Q Consensus 279 p~~~~~l~s~~~dg-----~i~vwd~~ 300 (372)
.++++++.|+.++ .+.+||+.
T Consensus 252 -~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 252 -LRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp -ETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred -ECCEEEEEcCcCCCcccccEEEEcCC
Confidence 2566777776542 34555554
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.27 E-value=3.3 Score=42.84 Aligned_cols=122 Identities=11% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCEEEEEe----------CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCe
Q 017421 181 QRHLVYAS----------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (372)
Q Consensus 181 ~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~ 250 (372)
..++++|+ ..|.|.+|++..++...+.. .. ..+++++++-- +| +|++|- ...
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~--~~-------------v~g~v~al~~~-~g-~Lla~i-g~~ 905 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAE--KE-------------VKGAVYSMVEF-NG-KLLASI-NST 905 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEE--EE-------------ESSCEEEEEEE-TT-EEEEEE-TTE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEE--EE-------------cCCcCEEEeee-CC-EEEEEc-CCE
Confidence 46788876 35789999987544322222 11 12378887633 35 455544 588
Q ss_pred EEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc---------cCCCCCeeEEEeccCCCeE
Q 017421 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL---------TRSINPCNKYLFNPCNKYL 321 (372)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~---------~~~~~~v~~~~~s~~g~~l 321 (372)
|++|++...+.+..-..+-..|..+... ..+++++.|..-..|.++..+.. .....+++++.|-.++.++
T Consensus 906 l~vy~l~~~~~L~~~~~~~~~i~~~~l~-~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l 984 (1158)
T 3ei3_A 906 VRLYEWTTEKELRTECNHYNNIMALYLK-TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFL 984 (1158)
T ss_dssp EEEEEECTTSCEEEEEEECCCSCEEEEE-EETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEE
T ss_pred EEEEECCCCceEEEEeeccccEEEEEEe-ccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEE
Confidence 9999998765433111111223333443 34789999988777777654421 1345677888886665433
No 326
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.15 E-value=0.81 Score=39.42 Aligned_cols=159 Identities=9% Similarity=-0.023 Sum_probs=90.7
Q ss_pred EEECCCCCEEEEEeCC--------------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----CCC
Q 017421 130 SQFSADGSLFVAGFQA--------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----MSP 191 (372)
Q Consensus 130 ~~~s~~~~~l~~~~~d--------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg 191 (372)
--++++|++|...... ..|+..++....... +.. -.+..|++++++|+... ...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~----l~~----~~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV----LDP----DPCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE----EEC----SCEEEEEEETTEEEEEEESSSSCE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE----eec----CCccEEEEeCCEEEEEeecCCCCc
Confidence 3568889988766542 357777777653211 111 11236777899988776 244
Q ss_pred eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeEEEEeecCCC
Q 017421 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILAHTS 270 (372)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~ 270 (372)
.|...++.......+.. + .+ ..|+|+++.|+-.+. ...|.+-++..+.....+. +
T Consensus 130 ~Iy~~~~dGs~~~~lt~-----------------~--~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~ 185 (302)
T 3s25_A 130 SLYRIRIDGEEKKKIKN-----------------H--YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---C 185 (302)
T ss_dssp EEEEEETTSCCCEEEES-----------------S--CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---S
T ss_pred eEEEEECCCCCeEEEeC-----------------C--Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---C
Confidence 56666776544322222 1 12 346778888875554 5778888888766543332 2
Q ss_pred CeEEEEEeCCCCCEEEEEeCC--CeEEEEeccccc---CCCCCeeEEEeccCCCeEEEE
Q 017421 271 DVNTVCFGDESGHLIYSGSDD--NLCKVNSVLLLT---RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~d--g~i~vwd~~~~~---~~~~~v~~~~~s~~g~~l~~~ 324 (372)
... ..+. |++.+|+-.... ..|..-++.... -....+ ..|+|++++|.-+
T Consensus 186 ~~~-~~~~-P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 186 NCY-KPVV-LDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp CEE-EEEE-EETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--EEEEEETTEEEEE
T ss_pred Ccc-ceee-ecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--ceEEECCCEEEEE
Confidence 232 3466 777777766543 345554543111 011222 4478888888755
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.15 E-value=1.5 Score=38.16 Aligned_cols=203 Identities=11% Similarity=0.078 Sum_probs=115.3
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421 130 SQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (372)
Q Consensus 130 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (372)
.-.+|..+.+|.-. ..++.|||+++..++...... .+|.-..|-.+. .|+..+ +..|+.|++..... . .+.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~----e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~-P-~kv 142 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT----DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ-P-VKM 142 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS----SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCC-C-EEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC----CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCC-C-cee
Confidence 34689888887765 578999999999777654432 368888887544 455444 46799999975321 1 111
Q ss_pred eecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEe--CC
Q 017421 210 TEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFG--DE 280 (372)
Q Consensus 210 ~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s--p~ 280 (372)
.+-+..+ ....|..-..+++.++++..+ -.|.+.+|..+.+.. +.+.+|...-..+... +.
T Consensus 143 FdR~~~L---------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~ 212 (365)
T 2xzh_A 143 FDRHSSL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAE 212 (365)
T ss_dssp EECCGGG---------TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEEEEEECCTTCSS
T ss_pred eecchhc---------ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeeeeEEEecCCCCC
Confidence 1111111 113677777888999876432 136788999886643 5667775433222221 11
Q ss_pred CCCEEEEEeC---CCeEEEEeccccc----CCCCCeeEEEeccC--CCeEEEE----eeeeEEE--eeceEEEeecccce
Q 017421 281 SGHLIYSGSD---DNLCKVNSVLLLT----RSINPCNKYLFNPC--NKYLIIY----LILVISI--YSPNILLDNYFLLR 345 (372)
Q Consensus 281 ~~~~l~s~~~---dg~i~vwd~~~~~----~~~~~v~~~~~s~~--g~~l~~~----~~~~~~~--~d~~i~lw~~~~~~ 345 (372)
...+|+.+.. .+++++-++.... ........+-|.|+ +.+=++- .-+.+.+ --|-+.++|+.++.
T Consensus 213 ~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 213 ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp CEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 1223443332 2588998885331 22223344445553 2221111 0111222 13778999999999
Q ss_pred EEEEEe
Q 017421 346 TFYSFM 351 (372)
Q Consensus 346 ~~~~~~ 351 (372)
.++.-.
T Consensus 293 ~i~~nr 298 (365)
T 2xzh_A 293 CIYMNR 298 (365)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887543
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.12 E-value=0.55 Score=40.14 Aligned_cols=146 Identities=15% Similarity=0.141 Sum_probs=76.2
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-------CeEEEEECCCCc
Q 017421 135 DGSLFVAGFQAS-----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------PIVHIVDVGSGT 202 (372)
Q Consensus 135 ~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~ 202 (372)
+++.++.|+.++ .+.+||+.+..-... ............+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-CCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 567777777553 578899887643221 111111212222222 56666666542 458899998876
Q ss_pred eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEeec-CCCCeEEEE
Q 017421 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLRILA-HTSDVNTVC 276 (372)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~-~~~~v~~~~ 276 (372)
-.......... .+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-...-.. ....-.+++
T Consensus 185 W~~~~~~p~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 185 WTYIAEMSTRR----------SGA----GVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp EEEECCCSSCC----------BSC----EEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred EEECCCCcccc----------ccc----cEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 54432221110 011 22222 56777777654 3689999987753222111 111112233
Q ss_pred EeCCCCCEEEEEeCCC-----eEEEEeccc
Q 017421 277 FGDESGHLIYSGSDDN-----LCKVNSVLL 301 (372)
Q Consensus 277 ~sp~~~~~l~s~~~dg-----~i~vwd~~~ 301 (372)
. .++++++.|+.++ .+.+||+.+
T Consensus 249 ~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 249 A--VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp E--ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred E--ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 3 3567777777553 377777753
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.01 E-value=1.6 Score=42.46 Aligned_cols=153 Identities=14% Similarity=0.169 Sum_probs=81.4
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC--eEEEEECCCCceeee
Q 017421 135 DGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGTMESL 206 (372)
Q Consensus 135 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~ 206 (372)
+++.++.|+.+ ..+.+||+.+..-... ........ -.+++...+++.++.|+.++ .+.+||+.+..-...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~-~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMI-KSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEEC-CCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEEC-CCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 77778887654 3578999887632221 11111111 12333323788888887654 699999988765333
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeC--C-----CeEEEEECCCCe------E--EEEeecCCC
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSS--D-----DCIYVYDLEANK------L--SLRILAHTS 270 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~--d-----g~i~iwd~~~~~------~--~~~~~~~~~ 270 (372)
...... +....+| ..+.+..+ ++.++.|+. + ..+.+||+.+.+ - +........
T Consensus 529 ~~~g~~-------p~~r~~~----~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R 597 (695)
T 2zwa_A 529 TPKDEF-------FQNSLVS----AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR 597 (695)
T ss_dssp CCSSGG-------GGSCCBS----CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC
T ss_pred cCCCCC-------CCcccce----eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc
Confidence 221000 0001112 23444554 666777765 2 458999998766 1 111111111
Q ss_pred CeEEEEEeCCCCCEEEEEeC--------CCeEEEEeccc
Q 017421 271 DVNTVCFGDESGHLIYSGSD--------DNLCKVNSVLL 301 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~--------dg~i~vwd~~~ 301 (372)
.-.+++.. .++.+++.|+. ...+.+||+.+
T Consensus 598 ~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 598 YGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp BSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 11233333 34778888874 34588999874
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.70 E-value=1.8 Score=37.09 Aligned_cols=141 Identities=12% Similarity=-0.026 Sum_probs=72.6
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC-----C------CeEEEEECCCCceeee
Q 017421 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-----S------PIVHIVDVGSGTMESL 206 (372)
Q Consensus 138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------g~i~vwd~~~~~~~~~ 206 (372)
+++.|+ ..+.+||..+++-... ................+++.++.|+. . ..+.+||..+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCA--SLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEE--ECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEcC--CceEEECCCCCeEecC--CCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 344555 5799999988753221 11111112222233347788888873 1 1277889888765433
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCeEEE--EeecCCCCeEEEE
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD--------DCIYVYDLEANKLSL--RILAHTSDVNTVC 276 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d--------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~ 276 (372)
........ +| ..+.+ +++.++.|+.+ ..+.+||..+.+-.. .+... ..-.+++
T Consensus 83 ~~~p~~r~----------~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~ 145 (315)
T 4asc_A 83 PPLPSPRC----------LF----GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTVL 145 (315)
T ss_dssp CCBSSCEE----------SC----EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEE
T ss_pred CCCCcchh----------ce----eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeEE
Confidence 22211110 11 11222 45666666632 358999998765321 11111 1112233
Q ss_pred EeCCCCCEEEEEeC-C-----CeEEEEeccc
Q 017421 277 FGDESGHLIYSGSD-D-----NLCKVNSVLL 301 (372)
Q Consensus 277 ~sp~~~~~l~s~~~-d-----g~i~vwd~~~ 301 (372)
. .++++++.|+. + ..+.+||+.+
T Consensus 146 ~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 146 S--HMDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp E--ETTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred E--ECCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 3 35667777765 2 4588888763
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.70 E-value=1.6 Score=42.55 Aligned_cols=153 Identities=15% Similarity=0.116 Sum_probs=84.0
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCeEEEEeee-----cccCCcceEEEEECCCCCEEEEEeCC------CeEEEEEC
Q 017421 134 ADGSLFVAGFQA----SQIRIYDVERGWKIQKDIL-----AKSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDV 198 (372)
Q Consensus 134 ~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~ 198 (372)
.++..++.|+.+ ..+.+||..++.-...... .......-..+.+..+++.++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567777888753 4688999887643222101 11111222333333267777777653 35888998
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCeEEEEe-----ecCCCC
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD--CIYVYDLEANKLSLRI-----LAHTSD 271 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg--~i~iwd~~~~~~~~~~-----~~~~~~ 271 (372)
.+.+-.......... .+| +++...++++++.|+.++ .+.+||..+.+-...- ......
T Consensus 476 ~t~~W~~~~~~p~~R----------~~h-----~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 476 KTREWSMIKSLSHTR----------FRH-----SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp TTTEEEECCCCSBCC----------BSC-----EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred CCCcEEECCCCCCCc----------ccc-----eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccc
Confidence 887654332221111 011 222223788888887654 6999999887532221 111222
Q ss_pred eEEEEEeCCC-CCEEEEEeC--C-----CeEEEEecccc
Q 017421 272 VNTVCFGDES-GHLIYSGSD--D-----NLCKVNSVLLL 302 (372)
Q Consensus 272 v~~~~~sp~~-~~~l~s~~~--d-----g~i~vwd~~~~ 302 (372)
..++.+. .+ +++++.|+. + ..+.+||+.+.
T Consensus 541 ~~a~v~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 541 SAGLEFD-PVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp SCEEEEE-TTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred eeEEEEe-CCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3346666 44 777777765 2 35888887643
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.46 E-value=2.1 Score=36.75 Aligned_cols=150 Identities=12% Similarity=0.075 Sum_probs=76.8
Q ss_pred EECCCCCEEEEEeC----CC-------cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-------Ce
Q 017421 131 QFSADGSLFVAGFQ----AS-------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------PI 192 (372)
Q Consensus 131 ~~s~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~ 192 (372)
....++..++.|+. ++ .+.+||..+..-... ............+.+ +++.++.|+.+ ..
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL-PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-CCCCccccccceEEE--CCEEEEEcCccCCCCcccce
Confidence 34567888888873 12 177888877633221 111111111222223 56777777653 35
Q ss_pred EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEee
Q 017421 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRIL 266 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~ 266 (372)
+.+||+.+.+-.......... .+| ..+. .++++++.|+. -..+.+||+.+.+-...-.
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r----------~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 192 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKV----------YGH----NVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP 192 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCE----------ESC----EEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCCEeECCCCCCcc----------ccc----EEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC
Confidence 888998887654333221111 012 1122 35666676653 2358999998875322211
Q ss_pred c-CCCCeEEEEEeCCCCCEEEEEeCC-----CeEEEEeccc
Q 017421 267 A-HTSDVNTVCFGDESGHLIYSGSDD-----NLCKVNSVLL 301 (372)
Q Consensus 267 ~-~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~vwd~~~ 301 (372)
. ....-.+++.. ++++++.|+.+ ..+.+||+.+
T Consensus 193 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 193 MKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC
Confidence 1 11111233333 56777777643 3467788763
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.22 E-value=0.54 Score=41.32 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=28.5
Q ss_pred CCCEEEEEeC-C---------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC
Q 017421 135 DGSLFVAGFQ-A---------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS 190 (372)
Q Consensus 135 ~~~~l~~~~~-d---------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 190 (372)
++++++.|+. + ..+.+||+.+..-................+. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5677777765 2 4689999987642221111101111122222 467777888754
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.20 E-value=3.1 Score=37.66 Aligned_cols=198 Identities=10% Similarity=0.063 Sum_probs=115.2
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecc
Q 017421 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (372)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 208 (372)
+.-.+|..+.||.-. ..++.|||+++..++....... +|.-..|-.+ +.|+..+ +..|+.|++..... . .+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e----~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~-P-~k 140 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQ-P-VK 140 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS----CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCC-C-EE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC----CceEEEecCC-CeEEEEc-CCeeEEecccCCCC-c-hh
Confidence 344788888777655 5799999999987776544322 5777788644 4455444 46799999975321 1 11
Q ss_pred eeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEe--C
Q 017421 209 VTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFG--D 279 (372)
Q Consensus 209 ~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s--p 279 (372)
..+-+..+ ....|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+|...-..+... +
T Consensus 141 vFdR~~~L---------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 141 MFDRHSSL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp EEECCGGG---------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCS
T ss_pred heecchhc---------ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCC
Confidence 11111111 123677778889999886332 23678899988654 35667775444333332 0
Q ss_pred CCCCEEEEEeC---CCeEEEEeccccc----CCCCCe--------------eEEEeccCCCeEEEEeeeeEEEeeceEEE
Q 017421 280 ESGHLIYSGSD---DNLCKVNSVLLLT----RSINPC--------------NKYLFNPCNKYLIIYLILVISIYSPNILL 338 (372)
Q Consensus 280 ~~~~~l~s~~~---dg~i~vwd~~~~~----~~~~~v--------------~~~~~s~~g~~l~~~~~~~~~~~d~~i~l 338 (372)
....+++.+.. .+.++|.++.... ...... .++..++.-..+..-+ --|-+.+
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT------K~G~i~l 284 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT------KYGYIHL 284 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE------TTSEEEE
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe------cCceEEE
Confidence 11124444443 2789998885321 111222 3344444433333322 2377889
Q ss_pred eecccceEEEEEe
Q 017421 339 DNYFLLRTFYSFM 351 (372)
Q Consensus 339 w~~~~~~~~~~~~ 351 (372)
+|+.++..++.-.
T Consensus 285 yDleTgt~i~~nr 297 (494)
T 1bpo_A 285 YDLETGTCIYMNR 297 (494)
T ss_dssp EETTTCCEEEEEE
T ss_pred Eecccceeeeeec
Confidence 9999999887543
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.18 E-value=1.1 Score=38.66 Aligned_cols=135 Identities=10% Similarity=0.074 Sum_probs=75.5
Q ss_pred EECCCCCEEEEEe--CC--CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC-CCeEEEEECCCCceee
Q 017421 131 QFSADGSLFVAGF--QA--SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTMES 205 (372)
Q Consensus 131 ~~s~~~~~l~~~~--~d--g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~ 205 (372)
.|++++++|+-.. .+ ..|..-++.... ... +. .+. + ..|+|+++.|+..+. ...|.+.++..+....
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~-lt--~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKK-IK--NHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEE-EE--SSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEE-Ee--CCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 6788898888765 33 345555555332 222 11 221 2 346778888887665 6788888887765433
Q ss_pred ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC
Q 017421 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD--DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH 283 (372)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 283 (372)
+.. . ... ..++|++.+|+-.... ..|..-++..... ..+.. ..+ ..|+ |++.
T Consensus 182 l~~---~----------------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~--~~~--~~~~-~~g~ 235 (302)
T 3s25_A 182 FYD---C----------------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE--ANI--EHYN-VYGS 235 (302)
T ss_dssp EEC---S----------------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC--SCE--EEEE-EETT
T ss_pred EeC---C----------------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC--CCc--ceEE-ECCC
Confidence 321 0 111 2356999888766543 3566667765442 33432 233 3366 6777
Q ss_pred EEEEEeC--CCeEEEEec
Q 017421 284 LIYSGSD--DNLCKVNSV 299 (372)
Q Consensus 284 ~l~s~~~--dg~i~vwd~ 299 (372)
.|+.++. .+.|..-++
T Consensus 236 ~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 236 LIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEEEECSSSCEEEEEET
T ss_pred EEEEEECCCCcEEEEEEC
Confidence 7776533 234444443
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.86 E-value=0.89 Score=39.01 Aligned_cols=144 Identities=14% Similarity=0.134 Sum_probs=74.5
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 017421 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (372)
Q Consensus 135 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 204 (372)
+++.++.|+.+ ..+.+||+.+..-... ............+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV-APMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeEC-CCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 56777776643 3688999887642221 111111222223333 56677777654 45889999877654
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEE--eecCCCCeEEEEE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLR--ILAHTSDVNTVCF 277 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~ 277 (372)
........ ..+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-... +... ..-.+++.
T Consensus 198 ~~~~~p~~----------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~ 260 (308)
T 1zgk_A 198 MITAMNTI----------RSGA----GVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR-RSALGITV 260 (308)
T ss_dssp ECCCCSSC----------CBSC----EEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEE
T ss_pred eCCCCCCc----------cccc----eEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC-ccceEEEE
Confidence 33221111 0012 22222 56677777654 4599999987753221 1111 11123333
Q ss_pred eCCCCCEEEEEeCC-----CeEEEEecc
Q 017421 278 GDESGHLIYSGSDD-----NLCKVNSVL 300 (372)
Q Consensus 278 sp~~~~~l~s~~~d-----g~i~vwd~~ 300 (372)
. ++++++.|+.+ ..+.+||+.
T Consensus 261 ~--~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 261 H--QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred E--CCEEEEEcCcCCCcccceEEEEcCC
Confidence 2 56677777644 235566654
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.31 E-value=0.79 Score=42.77 Aligned_cols=114 Identities=12% Similarity=0.146 Sum_probs=66.2
Q ss_pred ceEEEEECCCCCEEEEEeC-CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC
Q 017421 171 TVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg 249 (372)
....+..+|||+++++++. +.++.++|++.-.......+......+.-.+ .-.-.....+|.++|....+-.-|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~----e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP----ELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC----BCCSCEEEEEECSSSEEEEEETTTT
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec----cCCCcccEEEECCCCceEeeeeecc
Confidence 4678899999999887765 8899999987421100000000000000000 0112577899999996556667899
Q ss_pred eEEEEECCCC----------eEEEEeecCCCCeEEEEEe-----CCCCCEEEEEe
Q 017421 250 CIYVYDLEAN----------KLSLRILAHTSDVNTVCFG-----DESGHLIYSGS 289 (372)
Q Consensus 250 ~i~iwd~~~~----------~~~~~~~~~~~~v~~~~~s-----p~~~~~l~s~~ 289 (372)
.|..|++... ..+..+.-|-.+- .+.-+ .++|++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEec
Confidence 9999998753 3555555443222 12111 26677777664
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.28 E-value=3.8 Score=35.61 Aligned_cols=167 Identities=11% Similarity=0.053 Sum_probs=97.6
Q ss_pred CCceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC--C-CCEEEEEeC---C
Q 017421 124 TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--D-QRHLVYASM---S 190 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---d 190 (372)
...|-.-..+++.++++..+ -.|.+.+|..+.+.. ....+|-.....+.+.- . .+.++.+.. .
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc----ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 35566667788899876543 236789999987622 22456654433333221 1 123444433 2
Q ss_pred CeEEEEECCCCc-eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC
Q 017421 191 PIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT 269 (372)
Q Consensus 191 g~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 269 (372)
+.+++.++.... -.. ........+.|.+. ....-.-++..++.-..+..-+.-|.|++||+.++.++..-.-..
T Consensus 227 ~kLhIiEi~~~~~~~~--~f~kk~vdi~fppe---a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQ--PFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp EEEEEEECSSCCTTCC--CCCCEEEEECCCTT---CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cEEEEEEcCCCCCCCC--CcccccceeeCCcc---ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 588999985431 110 11111111122221 122345578888877888888999999999999999988877666
Q ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 270 SDVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
..|..-+-+ ....=++.....|.|.-..++
T Consensus 302 d~iF~ta~~-~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 302 ETIFVTAPH-EATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp SCEEEEEEE-GGGTEEEEEETTCEEEEEEEC
T ss_pred CceEEeccc-CCCCcEEEEcCCCEEEEEEEC
Confidence 667655555 343344445577776655543
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.14 E-value=6.7 Score=35.57 Aligned_cols=168 Identities=11% Similarity=0.047 Sum_probs=101.5
Q ss_pred CCceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC---CCEEEEEeCC---
Q 017421 124 TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD---QRHLVYASMS--- 190 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d--- 190 (372)
...|..-..+++.++++..+ -.|.+.+|..+.+.. ....+|-.....+.+.-+ .+.++.+...
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE----EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc----chheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 45566667788999876432 246789999887622 224566554444443321 1245555443
Q ss_pred CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC
Q 017421 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS 270 (372)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 270 (372)
+.+++.++...... ..........+.|.+. .-..-.-++..++....+..-+.-|.|++||+.++.++..-.-...
T Consensus 226 ~kLhi~Ei~~~~~~-~~~f~kk~vdv~fppe---~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~ 301 (494)
T 1bpo_A 226 GKLHIIEVGTPPTG-NQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (494)
T ss_dssp CEEEEEECSCCCTT-CCCCCCEEEECCCCTT---STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cEEEEEEcCCCccC-CCCccceeeeeeCCcc---cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC
Confidence 78999998643100 0011111111222221 1223455788888888888889999999999999999888776666
Q ss_pred CeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 271 DVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
.|..-+-+ ....=++.....|.|.-..+.
T Consensus 302 ~iF~t~~~-~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 302 TIFVTAPH-EATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp CEEEEEEE-TTTTEEEEEETTCEEEEEEEC
T ss_pred ceEEeccc-CCCCcEEEEccCceEEEEEEc
Confidence 77666666 444445555577876655544
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.25 E-value=3.6 Score=37.73 Aligned_cols=114 Identities=13% Similarity=-0.007 Sum_probs=60.0
Q ss_pred CceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCe---EEEEee--ecc----cCCcceEEEEECCC----CCEEEEEeC-
Q 017421 125 SRAYVSQFSADGS-LFVAGFQASQIRIYDVERGW---KIQKDI--LAK----SLRWTVTDTSLSPD----QRHLVYASM- 189 (372)
Q Consensus 125 ~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~---~~~~~~--~~~----~~~~~v~~~~~~~~----~~~l~~~~~- 189 (372)
...+.|+|.|||. .|+++...|.|++++..... .+.... ... ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3567899999996 45556778999999754321 111100 011 11345789999996 333333332
Q ss_pred -C----------CeEEEEECCCCc--eee---ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC
Q 017421 190 -S----------PIVHIVDVGSGT--MES---LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (372)
Q Consensus 190 -d----------g~i~vwd~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~ 247 (372)
+ ..|.-|.+..+. ... ...+.. .. .....| ....|.|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~------~~-~~~~~H--~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLE------VA-ELHRKH--LGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEE------EE-ESSSSS--CEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEE------cC-CCCCcc--cCCcEeECCCCcEEEEeCC
Confidence 1 144446654321 000 000111 00 011134 4678999999987776554
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.00 E-value=6.8 Score=33.46 Aligned_cols=141 Identities=15% Similarity=0.111 Sum_probs=71.0
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC----CC-------eEEEEECCCCceeee
Q 017421 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM----SP-------IVHIVDVGSGTMESL 206 (372)
Q Consensus 138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~ 206 (372)
.++.|+. .+.+||..+++-..... ..... .........++..++.|+. ++ .+.+||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~-~~~~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTAL-AEQIP-RNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEE-CTTSC-SSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCCceecccC-CccCC-ccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3444543 48899998875333211 11111 1222233457778888873 11 277888887765433
Q ss_pred cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCeEEEEeecCCCCe--EEEEE
Q 017421 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-------DCIYVYDLEANKLSLRILAHTSDV--NTVCF 277 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~v--~~~~~ 277 (372)
....... ..| ..+.+ +++.++.|+.+ ..+.+||+.+.+-... .....+. .+++.
T Consensus 94 ~~~p~~r----------~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~ 156 (318)
T 2woz_A 94 PPLPSAR----------CLF----GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVIS 156 (318)
T ss_dssp SCBSSCB----------CSC----EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEE
T ss_pred CCCCccc----------ccc----ceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCCCCcccccEEEE
Confidence 2221111 012 11222 56677777653 2588999987653222 1111111 12223
Q ss_pred eCCCCCEEEEEeC------CCeEEEEeccc
Q 017421 278 GDESGHLIYSGSD------DNLCKVNSVLL 301 (372)
Q Consensus 278 sp~~~~~l~s~~~------dg~i~vwd~~~ 301 (372)
.++.+++.|+. -..+.+||+.+
T Consensus 157 --~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 157 --HNGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp --ETTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred --ECCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 35677777764 23588888863
No 342
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.20 E-value=19 Score=37.26 Aligned_cols=184 Identities=12% Similarity=0.126 Sum_probs=95.0
Q ss_pred CCCceEEEEECCC------CCEEEEEeC-CCcEEEEeCCCCeEEEEeeecc-cCCcceEEEEECCCCCEEEEEeCCCeEE
Q 017421 123 TTSRAYVSQFSAD------GSLFVAGFQ-ASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (372)
Q Consensus 123 ~~~~v~~~~~s~~------~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 194 (372)
....|.|+++.|. .+++++|.. |++|+|+++...+.+....... .....+.-+.+ ....+|..|-.||.+.
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALF 630 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEE
Confidence 3568999999863 378999997 9999999998765544322211 11112333333 2345788899999876
Q ss_pred EEECC--CCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe
Q 017421 195 IVDVG--SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV 272 (372)
Q Consensus 195 vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v 272 (372)
.+.+. ++.......... | ..++.-..+...+..-+.+..+....+|--+ ++.... .-....+
T Consensus 631 ~~~~d~~tg~l~d~r~~~L-------------G-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v 694 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTL-------------G-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEV 694 (1158)
T ss_dssp EEEECTTTCCEEEEEEEEC-------------C-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCC
T ss_pred EEEEcCCCCccccceeEEc-------------C-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHh
Confidence 66554 444322211111 0 1134333343334333333334444444433 222211 1111223
Q ss_pred -EEEEEeCCC-CCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEE
Q 017421 273 -NTVCFGDES-GHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 273 -~~~~~sp~~-~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~ 324 (372)
....|+... ..-++.. .++.++|..+..+. .....+..++++|..+.++++
T Consensus 695 ~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 695 NYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp CEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEE
T ss_pred ceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEE
Confidence 334554221 2344433 34558887764322 234567888999987765544
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.88 E-value=8.9 Score=40.31 Aligned_cols=201 Identities=11% Similarity=0.086 Sum_probs=108.3
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421 130 SQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (372)
Q Consensus 130 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (372)
.-.+|..+.+|.-. ..++.|||+++..++..... ..+|.-..|-.+. .|+..+ +..|+.|++..... +. ..
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~----~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~-P~-k~ 141 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM----TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ-PV-KM 141 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhccccc----CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCc-cH-HH
Confidence 34688888776654 67999999998766554322 3368788887544 444443 46799999965221 11 11
Q ss_pred eecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEe--CC
Q 017421 210 TEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFG--DE 280 (372)
Q Consensus 210 ~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s--p~ 280 (372)
..-+..+ -...|..-.-+++.++++..+ -.|.+.+|.++.+. .+.+.+|...-..+... ++
T Consensus 142 fdR~~~L---------~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~ 211 (1630)
T 1xi4_A 142 FDRHSSL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAE 211 (1630)
T ss_pred Hhcchhc---------ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCC
Confidence 1111110 023677777788888876332 34788899887653 34556665443333332 11
Q ss_pred CCCEEEEEeC---CCeEEEEecccc----cCCCCCeeEEEeccCC--CeEEE---E-eeeeEEE--eeceEEEeecccce
Q 017421 281 SGHLIYSGSD---DNLCKVNSVLLL----TRSINPCNKYLFNPCN--KYLII---Y-LILVISI--YSPNILLDNYFLLR 345 (372)
Q Consensus 281 ~~~~l~s~~~---dg~i~vwd~~~~----~~~~~~v~~~~~s~~g--~~l~~---~-~~~~~~~--~d~~i~lw~~~~~~ 345 (372)
...+++.+.. .+.++|-++... .........+-|.|+. .+=++ + .-+.+.+ --|-+.++|+.|+.
T Consensus 212 ~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 212 ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred CceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 2223333322 268888888543 1222233444454431 11110 0 0111111 23778899999988
Q ss_pred EEEE
Q 017421 346 TFYS 349 (372)
Q Consensus 346 ~~~~ 349 (372)
.++.
T Consensus 292 ~i~~ 295 (1630)
T 1xi4_A 292 CIYM 295 (1630)
T ss_pred hhhh
Confidence 7653
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.92 E-value=11 Score=34.37 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=61.6
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEECCCCce-eeecceeecccccceeccCCCCccccEEEEEEcCC----CCEEEE
Q 017421 171 TVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----GRELVA 244 (372)
Q Consensus 171 ~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~----~~~l~s 244 (372)
..+.|+|.|++. .|+++...|.|++++...... ..+..+... +......+.......|+|+|+ +.+.++
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~-----~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKL-----VQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTT-----BCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcce-----eccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 478999999996 566667889999997543211 011111000 000000012346789999996 443343
Q ss_pred EeC--C----------CeEEEEECCC----------CeEEEEee--cCCCCeEEEEEeCCCCCEEEEEeC
Q 017421 245 GSS--D----------DCIYVYDLEA----------NKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSD 290 (372)
Q Consensus 245 ~s~--d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~ 290 (372)
-+. + ..|.-|.+.. .+.+..+. ........|+|. |||.+.++.+.
T Consensus 90 yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fg-pDG~LYv~~Gd 158 (463)
T 2wg3_C 90 YTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFG-PDGFLYIILGD 158 (463)
T ss_dssp EEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEEC-TTSCEEEEECC
T ss_pred EeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeEC-CCCcEEEEeCC
Confidence 322 1 1455566542 22333333 112245789999 89988777654
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.47 E-value=14 Score=38.85 Aligned_cols=167 Identities=11% Similarity=0.067 Sum_probs=89.2
Q ss_pred CCceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC--C-CCCEEEEEeC---C
Q 017421 124 TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS--P-DQRHLVYASM---S 190 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~~~---d 190 (372)
...|..-..+++.++++..+ -.|.+.+|..+.+. .....+|-.....+... + ....++.+.. .
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 44566667788888876433 34788999987651 12244554444333332 1 1223333332 2
Q ss_pred CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC
Q 017421 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS 270 (372)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 270 (372)
+.++|.++...... ...+......+.|.+. .-..-...+..++....+...+.-|.|.+||+.++.++..-.-...
T Consensus 226 ~kLhi~Ei~~~~~~-~~~f~kk~~~~~~~~~---~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~ 301 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTG-NQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (1630)
T ss_pred ceEEEEecCCCccC-CCCCccccccccCCcc---cccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCC
Confidence 68899888553100 0111111112222221 1112344677788777888888899999999999998766554444
Q ss_pred CeEEEEEeCCCCCEEEEEeCCCeEEEEec
Q 017421 271 DVNTVCFGDESGHLIYSGSDDNLCKVNSV 299 (372)
Q Consensus 271 ~v~~~~~sp~~~~~l~s~~~dg~i~vwd~ 299 (372)
.|...+-+++.+..+. ....|.|.-..+
T Consensus 302 ~iF~~~~~~~~~g~~~-vnr~G~vl~v~v 329 (1630)
T 1xi4_A 302 TIFVTAPHEATAGIIG-VNRKGQVLSVCV 329 (1630)
T ss_pred ceEEeccCCCCCceEE-EcCCceEEEEEE
Confidence 5544444423333333 335555444333
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.77 E-value=15 Score=31.84 Aligned_cols=70 Identities=14% Similarity=0.089 Sum_probs=37.1
Q ss_pred CCCEEEEEeCC-CcEEEEeCCC-CeEEEEeeecc-cCCcceEEEEECCCCCEEEEEeC-C---------CeEEEEECCCC
Q 017421 135 DGSLFVAGFQA-SQIRIYDVER-GWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASM-S---------PIVHIVDVGSG 201 (372)
Q Consensus 135 ~~~~l~~~~~d-g~i~vwd~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~vwd~~~~ 201 (372)
+++.++.|+.+ ..+.+||+.. ........... ........+.+ +++.++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666776543 4688999863 11222211111 11122222333 5667777665 2 46889999887
Q ss_pred ceeee
Q 017421 202 TMESL 206 (372)
Q Consensus 202 ~~~~~ 206 (372)
+-...
T Consensus 97 ~W~~~ 101 (357)
T 2uvk_A 97 SWVKL 101 (357)
T ss_dssp EEEEC
T ss_pred cEEEC
Confidence 65433
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.32 E-value=13 Score=32.34 Aligned_cols=61 Identities=10% Similarity=-0.048 Sum_probs=37.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeecC-CCCeEEEEEe--CCCCCEEEEE-eCCCeEEEEecc
Q 017421 240 RELVAGSSDDCIYVYDLEANKLSLRILAH-TSDVNTVCFG--DESGHLIYSG-SDDNLCKVNSVL 300 (372)
Q Consensus 240 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s--p~~~~~l~s~-~~dg~i~vwd~~ 300 (372)
..++.++.||.|.-+|..+|+...++... ..++....-. +.++..++.. ..||.|..++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC
Confidence 46888999999999999999998888754 1222221100 0122333332 467777777754
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.73 E-value=43 Score=33.79 Aligned_cols=73 Identities=18% Similarity=0.067 Sum_probs=47.8
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC-----CCCeEEEEEeCCCCCEEEEE---eCCCeEEEEec
Q 017421 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFGDESGHLIYSG---SDDNLCKVNSV 299 (372)
Q Consensus 228 ~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~~l~s~---~~dg~i~vwd~ 299 (372)
..+.+++..++..++++-+.|+++++|++.+++++.+..-. ..........|..+.++.+- ..+|..++|.+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~ 315 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKL 315 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEE
Confidence 46777888888899999999999999999999988875411 11111222333344444332 24566777765
Q ss_pred c
Q 017421 300 L 300 (372)
Q Consensus 300 ~ 300 (372)
.
T Consensus 316 ~ 316 (950)
T 4gq2_M 316 N 316 (950)
T ss_dssp E
T ss_pred e
Confidence 4
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.67 E-value=37 Score=33.02 Aligned_cols=185 Identities=14% Similarity=0.102 Sum_probs=104.7
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 203 (372)
...|.++....+|. |-+|+.+| +..||..+...... .......|.++.. .++ .|..++.+ -+..+|..+++.
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~~---~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQP---ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECCC---SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE
T ss_pred CceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEECc---ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE
Confidence 45688888777775 44555655 78999887632211 1111224666654 344 45556665 578899877654
Q ss_pred eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecC----CCCeEEEEEe
Q 017421 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAH----TSDVNTVCFG 278 (372)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~----~~~v~~~~~s 278 (372)
........ + -....|.++....+|.+.+ |+. +.+..+|..+++..... ... ...|.++...
T Consensus 134 ~~~~~~~~---~---------l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 199 (758)
T 3ott_A 134 TSFDTRRN---G---------LPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLED 199 (758)
T ss_dssp EEECHHHH---C---------CSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEE
T ss_pred EEeccCCC---C---------cCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEE
Confidence 32211000 0 0113688888888887665 444 45778898776542211 111 1247888887
Q ss_pred CCCCCEEEEEeCCCeEEEEeccccc------CCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421 279 DESGHLIYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNPCNKYLIIYLILVISIYS 333 (372)
Q Consensus 279 p~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d 333 (372)
.++..|..|+. +-|..+|..+.. .....|.++...++|.+.+.. ...+..++
T Consensus 200 -~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~Gl~~~~ 257 (758)
T 3ott_A 200 -TTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNGLYVYH 257 (758)
T ss_dssp -TTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTEEEEEC
T ss_pred -CCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCceeEEe
Confidence 66665545553 457777765321 112347777777777766544 34455554
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.70 E-value=5.2 Score=37.43 Aligned_cols=68 Identities=9% Similarity=-0.028 Sum_probs=48.7
Q ss_pred CCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccccc------------------CCCCCeeEEEeccCCCeEEEEeeeeEE
Q 017421 270 SDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLLT------------------RSINPCNKYLFNPCNKYLIIYLILVIS 330 (372)
Q Consensus 270 ~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~------------------~~~~~v~~~~~s~~g~~l~~~~~~~~~ 330 (372)
.....+.++ |||++++.++ .+.++.++|++.+. .........+|.++| ..++..
T Consensus 323 ksPHGv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtl----- 395 (638)
T 3sbq_A 323 KNPHGCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTL----- 395 (638)
T ss_dssp SSCCCEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEE-----
T ss_pred CCCcceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeee-----
Confidence 344578888 9999888766 68899999998432 123455778999999 444431
Q ss_pred EeeceEEEeecccc
Q 017421 331 IYSPNILLDNYFLL 344 (372)
Q Consensus 331 ~~d~~i~lw~~~~~ 344 (372)
.-|.+|--|++...
T Consensus 396 fidSqvvkWni~~a 409 (638)
T 3sbq_A 396 FIDSQVVKWNMEEA 409 (638)
T ss_dssp TTTTEEEEEEHHHH
T ss_pred eecceEEEEeccHH
Confidence 14899999998775
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=81.02 E-value=15 Score=35.53 Aligned_cols=38 Identities=18% Similarity=0.101 Sum_probs=31.0
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q 017421 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (372)
Q Consensus 228 ~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 267 (372)
..|.++.+ +..++++-+.|.++|+|++++++++.+..-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45666655 367999999999999999999998877653
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.55 E-value=21 Score=36.11 Aligned_cols=39 Identities=8% Similarity=0.054 Sum_probs=33.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD 162 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 162 (372)
...+.+++..++..++++-+.|++++||++.++.++...
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 345777888888999999999999999999999877654
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=74.85 E-value=64 Score=31.30 Aligned_cols=35 Identities=9% Similarity=-0.004 Sum_probs=24.7
Q ss_pred ceEEEE-ECCCCCEEEEE-eCC----CcEEEEeCCCCeEEE
Q 017421 126 RAYVSQ-FSADGSLFVAG-FQA----SQIRIYDVERGWKIQ 160 (372)
Q Consensus 126 ~v~~~~-~s~~~~~l~~~-~~d----g~i~vwd~~~~~~~~ 160 (372)
....+. ++|++++++.+ +.. ..++++|+.+++.+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 344555 89999988764 222 379999999986554
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=73.54 E-value=44 Score=28.82 Aligned_cols=169 Identities=11% Similarity=0.066 Sum_probs=94.1
Q ss_pred CceEEE-EECC--CCCEEEEEeCCCcEEEEeCCCCeEE----EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421 125 SRAYVS-QFSA--DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (372)
Q Consensus 125 ~~v~~~-~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 197 (372)
..|.++ .+.. +..+++..+.+|.++--.+..-... ......... ..+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 344444 4442 5788999999999998887542111 111112232 3455555555566788888999988887
Q ss_pred CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------eEEEEe--ecC
Q 017421 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-------KLSLRI--LAH 268 (372)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~--~~~ 268 (372)
....+.............+.+.. ...|..+...+++..++..+..|.++.-.+..- +-+..+ ..-
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~------~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~ 247 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNI------DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR 247 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCT------TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT
T ss_pred CcccccCcCCcCCCCeeeecCCC------CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC
Confidence 76211111111111111122211 125666666566678999999999998876432 111222 221
Q ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc
Q 017421 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL 301 (372)
Q Consensus 269 ~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~ 301 (372)
.+.+..+... .+...++..+.+|.+..++...
T Consensus 248 ~d~lv~~~~~-~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 248 RGRLVGALIV-DDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp TCSEEEEEEE-CTTCEEEEEEGGGCEEEEEGGG
T ss_pred CCeEEEEEEe-CCCccEEEEcCCCeEEEEehhh
Confidence 3445555554 4455666677888877777653
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.95 E-value=60 Score=28.47 Aligned_cols=166 Identities=8% Similarity=0.008 Sum_probs=73.6
Q ss_pred CCceEEEEECC--CCCEEEEEeCCC----cEEEEeCCCCeEEEEeeec---cc--------CCcceEEEEECC-C-CCEE
Q 017421 124 TSRAYVSQFSA--DGSLFVAGFQAS----QIRIYDVERGWKIQKDILA---KS--------LRWTVTDTSLSP-D-QRHL 184 (372)
Q Consensus 124 ~~~v~~~~~s~--~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~---~~--------~~~~v~~~~~~~-~-~~~l 184 (372)
...|.+|++.| .+.+++.+ ..| .|...+ +.+......... .. ....|.++.+.| + ...+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 45699999998 55555544 334 343332 233222221110 00 112477899987 2 4556
Q ss_pred EEEeCCCeEEEEECCCCceeeecceeecccccceeccC--CCCccccEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeE
Q 017421 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAAD--DGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKL 261 (372)
Q Consensus 185 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~i~~~~~sp~-~~~l~s~s~dg~i~iwd~~~~~~ 261 (372)
..++..+.|...+-....-..............+.+.. .......+.+|.++|. ...|..+..++.|...+ ..++.
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 66665565554432222211111100000000000000 0011236888999883 34455454445444332 11221
Q ss_pred EEEeec-----C--------CCCeEEEEEeCCCCCEEEEEeCCC
Q 017421 262 SLRILA-----H--------TSDVNTVCFGDESGHLIYSGSDDN 292 (372)
Q Consensus 262 ~~~~~~-----~--------~~~v~~~~~sp~~~~~l~s~~~dg 292 (372)
-..+.. + ...+.++.++|.+...|..+...+
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 111110 0 124889999854556777776555
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.76 E-value=16 Score=37.70 Aligned_cols=38 Identities=32% Similarity=0.210 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 017421 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (372)
Q Consensus 229 ~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 266 (372)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45556667888999999999999999999999988754
No 357
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=68.36 E-value=63 Score=28.54 Aligned_cols=196 Identities=11% Similarity=0.132 Sum_probs=110.0
Q ss_pred CCceEEEEECCCCCEEEE--EeC-------------CCcEEEEeCCCC--eEEEEeeeccc---CCcceEEEEEC---CC
Q 017421 124 TSRAYVSQFSADGSLFVA--GFQ-------------ASQIRIYDVERG--WKIQKDILAKS---LRWTVTDTSLS---PD 180 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~--~~~-------------dg~i~vwd~~~~--~~~~~~~~~~~---~~~~v~~~~~~---~~ 180 (372)
--.|..+...+.+++-+. |-- --.|.+||+.++ +.+........ ....+..+.+. |+
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 346777788777776553 210 125889999998 77766544221 23457777777 22
Q ss_pred ----CCEEEEEe-CCCeEEEEECCCCceeeecceeeccc-ccceeccCCCCc----cccEEEEEEcCC----CCEEEEEe
Q 017421 181 ----QRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHD-GLDFSAADDGGY----SFGIFSLKFSTD----GRELVAGS 246 (372)
Q Consensus 181 ----~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~h----~~~i~~~~~sp~----~~~l~s~s 246 (372)
+.++..+. ..+.|.|+|+.+++..+........+ ...+.-. |. ...+..|+++|+ ++.|.-..
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~---G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYG---GKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEET---TEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEEC---CEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 33443333 36789999999998765543111110 0011110 11 247999999998 77777666
Q ss_pred CCCeEEEEECC-----CC---eEEEEeecCC---CCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc--cc----------
Q 017421 247 SDDCIYVYDLE-----AN---KLSLRILAHT---SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL--LT---------- 303 (372)
Q Consensus 247 ~dg~i~iwd~~-----~~---~~~~~~~~~~---~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~--~~---------- 303 (372)
..+. ++|.+. .. ..+..+ +.. ..-..++..+.+|.++++--..+.|..|+... +.
T Consensus 243 lss~-~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d 320 (381)
T 3q6k_A 243 GSAI-KVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS 320 (381)
T ss_dssp SSCS-EEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC
T ss_pred CCCC-cEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC
Confidence 5442 344432 11 112222 222 23345566546787777777889999999864 10
Q ss_pred CCCCCeeEEEeccCCCeEEEE
Q 017421 304 RSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 304 ~~~~~v~~~~~s~~g~~l~~~ 324 (372)
..-..+..+.+.++|.+.+.+
T Consensus 321 ~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 321 SRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TTCCSEEEEEECTTSCEEEEE
T ss_pred CCccccCeEEECCCCeEEEEE
Confidence 112245666666666544433
No 358
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=68.01 E-value=58 Score=27.98 Aligned_cols=156 Identities=8% Similarity=-0.007 Sum_probs=82.1
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEE-EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC---CCceeeecce
Q 017421 134 ADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG---SGTMESLANV 209 (372)
Q Consensus 134 ~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~ 209 (372)
|+...+++.+.+|.|+--.+..-... .......... .+..+........|+..+..|.++-.... .......-.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D-~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~- 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTD-RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ- 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTC-CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE-
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCC-EEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc-
Confidence 56677888899999887755421000 0001122222 34444444455667777788876655432 111000000
Q ss_pred eecccccceeccCCCCccccEEEE-EEcC--CCCEEEEEeCCCeEEEEECCC--------CeEEEEeecCCCCeEEEEEe
Q 017421 210 TEIHDGLDFSAADDGGYSFGIFSL-KFST--DGRELVAGSSDDCIYVYDLEA--------NKLSLRILAHTSDVNTVCFG 278 (372)
Q Consensus 210 ~~~~~~~~~~~~~~~~h~~~i~~~-~~sp--~~~~l~s~s~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~s 278 (372)
.....+.+.+. ..|..+ ...+ ++.+++..+.+|.++...+.. +.....+.. ...+..+...
T Consensus 81 -~i~~~i~L~~~------e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~ 152 (323)
T 1wp5_A 81 -HIANIIPIDRD------EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLT 152 (323)
T ss_dssp -EGGGTSCCCTT------CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEE
T ss_pred -ChhhccCCCCC------CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEe
Confidence 00001111111 235444 3332 256888999999999988742 222222332 2556566565
Q ss_pred CCCCCEEEEEeCCCeEEEEecc
Q 017421 279 DESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 279 p~~~~~l~s~~~dg~i~vwd~~ 300 (372)
.....++..+.+|.+..+...
T Consensus 153 -~~~~~i~l~T~~G~~irf~~~ 173 (323)
T 1wp5_A 153 -DGMNELFLVTHNGYALWFDES 173 (323)
T ss_dssp -CSCSEEEEEETTSEEEEEEGG
T ss_pred -CCCCEEEEEeCCCcEEEEEHH
Confidence 455677788899998888775
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.74 E-value=66 Score=28.16 Aligned_cols=101 Identities=10% Similarity=-0.005 Sum_probs=49.7
Q ss_pred cEEEEEEcCC--CCEEEEEeCCCeEEEEECC--CCeEEEEeec----------------CCCCeEEEEEeCCCCCEEEEE
Q 017421 229 GIFSLKFSTD--GRELVAGSSDDCIYVYDLE--ANKLSLRILA----------------HTSDVNTVCFGDESGHLIYSG 288 (372)
Q Consensus 229 ~i~~~~~sp~--~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~----------------~~~~v~~~~~sp~~~~~l~s~ 288 (372)
.|.++++.|. ...|.+++..+.|...+-. +.+.+..... ....+.+|.++|.+...|+.+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 5788999872 3455555555655544321 2222211100 123578899984344445545
Q ss_pred eCCCeEEEEecc--ccc----C-C-----------CCCeeEEEeccC-CCeEEEEeeeeE
Q 017421 289 SDDNLCKVNSVL--LLT----R-S-----------INPCNKYLFNPC-NKYLIIYLILVI 329 (372)
Q Consensus 289 ~~dg~i~vwd~~--~~~----~-~-----------~~~v~~~~~s~~-g~~l~~~~~~~~ 329 (372)
..++.|...+-. +.. . . ...+..+.++|. ...|.++....+
T Consensus 196 ~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl 255 (394)
T 3b7f_A 196 MSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGI 255 (394)
T ss_dssp EETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEE
T ss_pred ECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeE
Confidence 444444333211 111 0 0 124788999986 345555544333
No 360
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=65.96 E-value=1e+02 Score=29.93 Aligned_cols=177 Identities=15% Similarity=0.125 Sum_probs=100.4
Q ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeccc--CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 017421 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS--LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (372)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 201 (372)
...|.++....+|.+.+ |+..| |..++..++........... ....|.++...+++..|-.|+. +-+..+|..++
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 34688888888888665 44444 77888776643221111000 1224788888777765555554 45888998776
Q ss_pred ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-------cCCCCeEE
Q 017421 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-------AHTSDVNT 274 (372)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~ 274 (372)
+........ ...|.++...++|.+.+ |+. +-+.+++..+++...... -....|.+
T Consensus 222 ~~~~~~~l~----------------~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 283 (758)
T 3ott_A 222 QIKQTEAFH----------------NNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWN 283 (758)
T ss_dssp EEEEEEEEE----------------EEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEE
T ss_pred eEEeccCCC----------------CCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEE
Confidence 543221111 12588888888887655 444 458889887664322211 11235888
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeccc-c----------cCCCCCeeEEEeccCCCeEEEE
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVLL-L----------TRSINPCNKYLFNPCNKYLIIY 324 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~~-~----------~~~~~~v~~~~~s~~g~~l~~~ 324 (372)
+... .+|.+-+ |+..| +.++.... . ......|.++.-..+|.+-+..
T Consensus 284 i~~D-~~g~lWi-GT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 284 IFAD-QEHNIWL-GTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp EEEC-TTCCEEE-EESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EEEc-CCCCEEE-EeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 8876 6666444 44456 44433210 0 0123457777777777655543
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.97 E-value=32 Score=32.52 Aligned_cols=59 Identities=15% Similarity=0.287 Sum_probs=40.4
Q ss_pred cEEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCeEEEEeecC-CCCeEEEEEeCCCCCEEEEE
Q 017421 229 GIFSLKFSTDGRELVAGSSD------------DCIYVYDLEANKLSLRILAH-TSDVNTVCFGDESGHLIYSG 288 (372)
Q Consensus 229 ~i~~~~~sp~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~s~ 288 (372)
..--|+|+|.|++++.-..+ ..+.+.+..+++..+-+..+ ...++.++|+ ||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fs-pDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS-PDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC-TTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeEC-CCCCEEEEE
Confidence 45678999999977765432 24566666777665555443 4578889998 888777665
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.85 E-value=32 Score=35.49 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=30.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (372)
Q Consensus 172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (372)
+.++...++..++++-+.|+.+++|++.++++.....+
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 44556667888999999999999999999988665544
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.77 E-value=56 Score=30.72 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=41.7
Q ss_pred cccEEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCeEEEEeecC-CCCeEEEEEeCCCCCEEEEE
Q 017421 227 SFGIFSLKFSTDGRELVAGSS------------DDCIYVYDLEANKLSLRILAH-TSDVNTVCFGDESGHLIYSG 288 (372)
Q Consensus 227 ~~~i~~~~~sp~~~~l~s~s~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~s~ 288 (372)
-.....|.|+++|.+.++... ...|..++..+++....+... ...++.++|+ ||++.|++.
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS-PD~ktLfV~ 548 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS-PDQKTLFVG 548 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC-TTSSEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC-CCCCEEEEE
Confidence 356788999999987774332 125667777777765555432 3567889999 888877765
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.87 E-value=50 Score=31.07 Aligned_cols=62 Identities=13% Similarity=0.196 Sum_probs=40.6
Q ss_pred ceEEEEECCCCCEEEEEeC------------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC
Q 017421 171 TVTDTSLSPDQRHLVYASM------------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD 238 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 238 (372)
..-.|.|.++|.+.+.... ...+..++..+++........ ....++.++|+||
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---------------~~aEpnGiafSPD 541 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------------IGCEVTGISFSPD 541 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------------TTCEEEEEEECTT
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------------CCccccCCEECCC
Confidence 4668999999987774322 125667777677654433211 1136899999999
Q ss_pred CCEEEEEeC
Q 017421 239 GRELVAGSS 247 (372)
Q Consensus 239 ~~~l~s~s~ 247 (372)
++.|.+.-+
T Consensus 542 ~ktLfV~vQ 550 (592)
T 4a9v_A 542 QKTLFVGIQ 550 (592)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEe
Confidence 998876643
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.10 E-value=37 Score=32.08 Aligned_cols=60 Identities=23% Similarity=0.231 Sum_probs=40.1
Q ss_pred ceEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE
Q 017421 126 RAYVSQFSADGSLFVAGFQA------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 187 (372)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+- . .......++.+.|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf-~-~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF-M-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEE-E-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEE-E-eCCCCccCcCeeECCCCCEEEEE
Confidence 45678999999977664322 2355666666644332 2 22345689999999999887765
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.77 E-value=1e+02 Score=25.62 Aligned_cols=143 Identities=7% Similarity=-0.125 Sum_probs=72.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (372)
.|..++.... +.+.-. ||.|..|-......+.. .......|..++-...-. ++. . ||.|+.|-........
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~---p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTM---PAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSC---CGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCC---CccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC
Confidence 4555555432 333335 88999997654322111 111122466666654332 233 4 8999999865433211
Q ss_pred ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEE
Q 017421 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (372)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 285 (372)
. +.. -...|..++...+ +.+.-+ +|.|..|-....-.+..-......|..++.. ....+
T Consensus 96 ~---P~~-------------~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--~~~~~ 154 (282)
T 3qhy_B 96 V---PAE-------------ARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VYTAL 154 (282)
T ss_dssp C---CGG-------------GSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEE
T ss_pred C---Ccc-------------cCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--cCEEE
Confidence 1 000 0125777766543 334445 8999999765421111111123456666553 23333
Q ss_pred EEEeCCCeEEEEecc
Q 017421 286 YSGSDDNLCKVNSVL 300 (372)
Q Consensus 286 ~s~~~dg~i~vwd~~ 300 (372)
+. . ||.|..|-..
T Consensus 155 ~l-~-~G~v~~wG~n 167 (282)
T 3qhy_B 155 AV-K-NGGVIAWGDN 167 (282)
T ss_dssp EE-E-TTEEEEEECC
T ss_pred EE-E-CCEEEEecCC
Confidence 33 3 7888888654
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.50 E-value=1.1e+02 Score=29.57 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=28.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (372)
Q Consensus 171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (372)
.|.++.+ +..++++-+.|..+|+|+++++++......
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555555 467999999999999999999987655544
No 368
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=46.40 E-value=72 Score=22.24 Aligned_cols=78 Identities=9% Similarity=0.030 Sum_probs=40.5
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccccCCCCCee
Q 017421 231 FSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLTRSINPCN 310 (372)
Q Consensus 231 ~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~~~~~v~ 310 (372)
..+.+..||++++... ++ +|...+.. ...-..+.+. .+|++++.. .++...+|...+.........
T Consensus 22 ~~L~~q~dGnLvl~~~-~~---vW~snt~~--------~~~~~~l~l~-~dGNLVl~~-~~~~~~vW~S~t~~~~~~~~~ 87 (111)
T 3mez_A 22 AAFVMQGDCNLVLYNE-AG---GFQSNTHG--------RGVDCTLRLN-NRGQLEIHS-ANSNTPVWVYPRSVNTVRGNY 87 (111)
T ss_dssp EEEEECTTSCEEEECS-SC---CEECCCTT--------SCSSCEEEEC-TTSCEEEEC-SSCSSCSEEESSSCCCCSSCC
T ss_pred EEEEEccCCeEEEECC-CC---EEECCccc--------CCcCEEEEEc-CCCcEEEEe-CCCCEEEEEeccccCCCCcCE
Confidence 4556666776655422 22 66654321 1112356676 788877764 334445776543222222345
Q ss_pred EEEeccCCCeEE
Q 017421 311 KYLFNPCNKYLI 322 (372)
Q Consensus 311 ~~~~s~~g~~l~ 322 (372)
.+.+.+||.+++
T Consensus 88 ~l~Lq~dGNlvl 99 (111)
T 3mez_A 88 AATLGPDQHVTI 99 (111)
T ss_dssp EEEECTTSCEEE
T ss_pred EEEECCCCeEEE
Confidence 566666766554
No 369
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=40.11 E-value=1.3e+02 Score=28.90 Aligned_cols=70 Identities=16% Similarity=0.100 Sum_probs=44.4
Q ss_pred ceEEEEEC----CCCC---EEEEEeCCCcEE-EEeCCCCeEEEEeeecccCCcceEEEEECCCC--CEEEEEeCCCeEEE
Q 017421 126 RAYVSQFS----ADGS---LFVAGFQASQIR-IYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ--RHLVYASMSPIVHI 195 (372)
Q Consensus 126 ~v~~~~~s----~~~~---~l~~~~~dg~i~-vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~v 195 (372)
..+.|+.. .+++ .+..|..+|.|. +........+...........+|..+.++++. .+|++++.++.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 45666652 4443 577889999874 43444443333333333445688999999987 88988888775554
No 370
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=39.63 E-value=2.4e+02 Score=26.40 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=51.1
Q ss_pred CeEEEEECCCCeEEEEe--ecCC-----------CCeEEEEEeCCCCC-EEEEEe----CCCeEEEEecccccCCCCCee
Q 017421 249 DCIYVYDLEANKLSLRI--LAHT-----------SDVNTVCFGDESGH-LIYSGS----DDNLCKVNSVLLLTRSINPCN 310 (372)
Q Consensus 249 g~i~iwd~~~~~~~~~~--~~~~-----------~~v~~~~~sp~~~~-~l~s~~----~dg~i~vwd~~~~~~~~~~v~ 310 (372)
..|..||.+.++....+ .... ..+.-..+. .||+ -|+.|+ .||++ +|.... +|...+.
T Consensus 292 ~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVD-gDG~dEIv~Gs~~iD~dG~~-L~st~~--gHGDa~h 367 (591)
T 2zux_A 292 TMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVD-GDGKDEIIFGSMAVDHDGKG-MYSTGL--GHGDALH 367 (591)
T ss_dssp CEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCS-SSSSCEEEETTEEECTTSCE-EEECSC--CCCSCEE
T ss_pred eEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCC-CCCCceEEEeeeEECCCCCE-eeeCCC--CCCCeeE
Confidence 35888888877654433 2110 123333343 4443 344332 56655 676643 7777777
Q ss_pred EEEeccC--CCeEEEEeeeeEEEee-ceEEEeecccceEEEEEe
Q 017421 311 KYLFNPC--NKYLIIYLILVISIYS-PNILLDNYFLLRTFYSFM 351 (372)
Q Consensus 311 ~~~~s~~--g~~l~~~~~~~~~~~d-~~i~lw~~~~~~~~~~~~ 351 (372)
-..|.|+ |.-++.+.... .+ .-..+.|+.+|+.++...
T Consensus 368 v~dldP~r~GlEv~~~~E~~---~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 368 TGDLDPGRPGLEVFQVHEDK---NAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp EECCCTTSSSCEEEEECCCT---TSSCSEEEEETTTCCEEEEEC
T ss_pred EeecCCCCCCcEEEEEecCC---CCCCccEEEECCCCcEEEEcC
Confidence 7788887 34455443210 01 133456777777776653
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=32.15 E-value=2.2e+02 Score=23.62 Aligned_cols=181 Identities=8% Similarity=-0.039 Sum_probs=100.7
Q ss_pred CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCe----EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 017421 124 TSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGW----KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (372)
Q Consensus 124 ~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 198 (372)
...|..+-... +...++..+.+|.++-..+..-. -. ....+.. ...+..+........++..+..|.+..+..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~-~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGM-PIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTE-ECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCe-EEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 45565554321 56789999999999999875431 01 1111222 234555555556667888889999888775
Q ss_pred CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC-------CeEEEEeecCCCC
Q 017421 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-------NKLSLRILAHTSD 271 (372)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~ 271 (372)
..-.. ..........+.+.. ...|..+...+++..++..+..|.++...+.. ++-+..+ ...+.
T Consensus 145 ~eip~--~gR~a~Gv~~i~L~~------~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~ 215 (276)
T 3no0_A 145 REVPP--STPGARGVQGIKLEK------NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDT 215 (276)
T ss_dssp GGSCB--CCTTCCCEECCCCCT------TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSC
T ss_pred hhCCC--cCCCCCCEEEEccCC------CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCc
Confidence 32111 000001111111111 12566655555667888889999999888643 2222233 23345
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEE--Eeccccc---CCCCCeeEEEecc
Q 017421 272 VNTVCFGDESGHLIYSGSDDNLCKV--NSVLLLT---RSINPCNKYLFNP 316 (372)
Q Consensus 272 v~~~~~sp~~~~~l~s~~~dg~i~v--wd~~~~~---~~~~~v~~~~~s~ 316 (372)
+..+... .+...++..+.+|.+.. ++...+. .....|.-+...+
T Consensus 216 lv~~~~~-~~~~~i~~~t~~G~~ir~~~~~~~i~~~~R~~~Gv~~i~l~~ 264 (276)
T 3no0_A 216 LVDLIPI-KEEVELLITTKNGKAFYDKINQKDIPLSTKKSIPRTRWKLED 264 (276)
T ss_dssp EEEEEEE-SSEEEEEEEETTSCEEEEEEEGGGSCBCCTTSCCC-CCCCTT
T ss_pred EEEEEEe-CCCCEEEEEcCCCeEEEeeeCHHHCCCcCCCCCCEEeEEcCC
Confidence 5555444 34456777778888887 8776433 2334555555555
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=31.13 E-value=2.7e+02 Score=24.35 Aligned_cols=164 Identities=10% Similarity=0.076 Sum_probs=85.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCC---C------CeEEEEeeecccCCcceEEEE-ECC--CCCEEEEEeCCCe
Q 017421 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVE---R------GWKIQKDILAKSLRWTVTDTS-LSP--DQRHLVYASMSPI 192 (372)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~---~------~~~~~~~~~~~~~~~~v~~~~-~~~--~~~~l~~~~~dg~ 192 (372)
..+..+........|+..+..|.+.-+... . |..+...+.+.. ...|.++. ... ++.+|+.++..|.
T Consensus 46 D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 124 (370)
T 3l6v_A 46 DFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLES-GERVQAVLPVREYADNRYVFMATRNGT 124 (370)
T ss_dssp CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCT-TCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCe
Confidence 344444444455666666777776555432 1 212122111222 23454443 332 4568999999999
Q ss_pred EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CeEEE
Q 017421 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---------NKLSL 263 (372)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~---------~~~~~ 263 (372)
++...+..-..... .....+.+.. ...+-.+........++..+.+|.+..++... |....
T Consensus 125 vKrt~l~e~~~~~~----~G~~ai~L~~------~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i 194 (370)
T 3l6v_A 125 VKKTPLSEFAFRLA----RGKIAINLDE------GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGI 194 (370)
T ss_dssp EEEEEGGGGCSCCT----TCEESSCCCT------TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECC
T ss_pred EEEeEHHHhhcccC----CceEEEEeCC------CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeE
Confidence 99888643221100 0000011110 11344444444456777788889888887542 11111
Q ss_pred EeecCCCCeEEEEEeCC----------------------------------CCCEEEEEeCCCeEEEEecc
Q 017421 264 RILAHTSDVNTVCFGDE----------------------------------SGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 264 ~~~~~~~~v~~~~~sp~----------------------------------~~~~l~s~~~dg~i~vwd~~ 300 (372)
.+. ....|.++...+. .+..+++.+..|..+...+.
T Consensus 195 ~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 195 RLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp CCC-TTCCEEEEEEECCC-----------------------------------CEEEEEETTSEEEEEEGG
T ss_pred EeC-CCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHH
Confidence 222 2345555555421 45688899999999988876
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=30.65 E-value=2.5e+02 Score=23.77 Aligned_cols=156 Identities=8% Similarity=0.002 Sum_probs=83.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEE------EeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC---Ccee
Q 017421 134 ADGSLFVAGFQASQIRIYDVERGWKIQ------KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS---GTME 204 (372)
Q Consensus 134 ~~~~~l~~~~~dg~i~vwd~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~ 204 (372)
++...+++.+.+|.|+--.+..-.... ......... .+..+........++..+..|.++-..... ....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D-~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGD-EIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTC-CEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCC-EEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 567778889999999988765331110 001112222 344444444556777778888876665421 1100
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEcC---CCCEEEEEeCCCeEEEEECCC-------CeEEEEeecCCCCeEE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFST---DGRELVAGSSDDCIYVYDLEA-------NKLSLRILAHTSDVNT 274 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp---~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~ 274 (372)
..-. .....+.+.+. ..|..+..-+ +..+++..+..|.++...+.. |.....+.. ...+..
T Consensus 85 ~~G~--~i~~~l~l~~~------e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~ 155 (312)
T 1suu_A 85 SKGQ--NISELINLGDQ------EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTS 155 (312)
T ss_dssp ---C--BGGGTSCCCTT------CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEE
T ss_pred CCCc--ChhhccCCCCC------CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEE
Confidence 0000 00001111111 1344443322 456788889999999888743 222222333 456666
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
+... .....++..+.+|.+..+...
T Consensus 156 ~~~~-~~~~~i~l~T~~G~~~r~~~~ 180 (312)
T 1suu_A 156 AEIV-FKDEKVICLSKKGSAFIFNSR 180 (312)
T ss_dssp EEEE-CTTCEEEEEETTSEEEEEEGG
T ss_pred EEEe-CCCCEEEEEeCCCcEEEEEHH
Confidence 6665 455678888899999888875
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=29.86 E-value=1.2e+02 Score=28.27 Aligned_cols=70 Identities=11% Similarity=0.015 Sum_probs=42.6
Q ss_pred ceEEEEECCCC--CEEEEEeCCCcEEEEeCCCCe---EEEEeeecccCCcceE-EEEECCCCCEEEEEeCCCeEEE
Q 017421 126 RAYVSQFSADG--SLFVAGFQASQIRIYDVERGW---KIQKDILAKSLRWTVT-DTSLSPDQRHLVYASMSPIVHI 195 (372)
Q Consensus 126 ~v~~~~~s~~~--~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~v 195 (372)
..+.|+....+ ..+..|..+|.|.-..+.... .+...........+|. .+.++++..+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45666655433 346678899987655443221 1222222223345785 8999999999999887765544
No 375
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.64 E-value=1.5e+02 Score=20.61 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=26.4
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEecccccCCCCCeeEEEeccCCCeEE
Q 017421 273 NTVCFGDESGHLIYSGSDDNLCKVNSVLLLTRSINPCNKYLFNPCNKYLI 322 (372)
Q Consensus 273 ~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~~~~~v~~~~~s~~g~~l~ 322 (372)
..+.+. .+|++++.. .++.+ +|...+... .....+.+.+||.+.+
T Consensus 59 ~~l~l~-~dGNLVl~d-~~~~~-iW~S~t~~~--~~~~~~~L~~dGnlvl 103 (113)
T 3mez_B 59 CFMRLG-HSGELDITD-DRLNT-VFVSNTVGQ--EGDYVLILQINGQAVV 103 (113)
T ss_dssp CEEEEC-TTSCEEEEC-TTSCE-EEECSCCCS--SSCCEEEECTTSCEEE
T ss_pred EEEEEe-CCCcEEEEC-CCCCE-EEECCCcCC--CCCEEEEEcCCceEEE
Confidence 456777 889887764 34544 787655321 1224556666666554
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.35 E-value=1.7e+02 Score=26.82 Aligned_cols=70 Identities=13% Similarity=0.128 Sum_probs=41.8
Q ss_pred ceEEEEECC----CCC--EEEEEeCCCcEEEEeCC-CCe------EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe
Q 017421 126 RAYVSQFSA----DGS--LFVAGFQASQIRIYDVE-RGW------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (372)
Q Consensus 126 ~v~~~~~s~----~~~--~l~~~~~dg~i~vwd~~-~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 192 (372)
..+.|+... +++ .+..|..+|.|+-.-+. .+. .+...+.......+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456665542 243 46678889987544332 211 11111122223468999999999999999998876
Q ss_pred EEE
Q 017421 193 VHI 195 (372)
Q Consensus 193 i~v 195 (372)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 377
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=26.80 E-value=2.9e+02 Score=23.29 Aligned_cols=156 Identities=10% Similarity=0.037 Sum_probs=79.3
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEE------eeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC---CCCcee
Q 017421 134 ADGSLFVAGFQASQIRIYDVERGWKIQK------DILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV---GSGTME 204 (372)
Q Consensus 134 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~---~~~~~~ 204 (372)
|+...+++.+.+|.|+--.+..-..... ........ .+..+........|+..+..|.++-... ......
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D-~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEED-FIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------C-CEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCC-EEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4566788889999998777654321110 00111222 3434444445566777777887655543 221110
Q ss_pred eecceeecccccceeccCCCCccccEEEEEEc---CCCCEEEEEeCCCeEEEEECCC-------CeEEEEeecCCCCeEE
Q 017421 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFS---TDGRELVAGSSDDCIYVYDLEA-------NKLSLRILAHTSDVNT 274 (372)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s---p~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~ 274 (372)
..-. .....+.+.+. ..|..+..- .++.+++..+..|.++...+.. +.....+..+ ..+..
T Consensus 80 a~G~--~i~~~l~l~~~------e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~ 150 (307)
T 1zi0_A 80 ARGR--PIVNLLPLEQD------ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIG 150 (307)
T ss_dssp SCCE--EGGGTSCCCTT------CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEE
T ss_pred CCCe--EhhhccCCCCC------CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEE
Confidence 0000 00000111111 245544332 3456788899999999987642 2222223333 55656
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 275 VCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 275 ~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
+... .....++..+.+|.+..+...
T Consensus 151 ~~~~-~~~~~i~l~T~~G~~irf~~~ 175 (307)
T 1zi0_A 151 VDLT-SGEDEVMLFSAEGKVVRFKES 175 (307)
T ss_dssp EEEE-CTTCEEEEEETTSEEEEEEGG
T ss_pred EEEe-CCCCEEEEECCCCcEEEEEHH
Confidence 5555 445567778889988888765
No 378
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=22.77 E-value=3.2e+02 Score=22.50 Aligned_cols=143 Identities=10% Similarity=-0.092 Sum_probs=74.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee
Q 017421 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (372)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (372)
.|..++...+-. ++. . ||.|..|-......+-. .......|..++...+ +.+.-. +|.|+.|-........
T Consensus 64 ~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~---P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg 134 (282)
T 3qhy_B 64 GVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTV---PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT 134 (282)
T ss_dssp CCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCC---CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS
T ss_pred CEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCC---CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC
Confidence 566666553322 333 4 89999997654322111 1111235766666543 444445 9999999865433211
Q ss_pred ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEE
Q 017421 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (372)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 285 (372)
... . ....|..++...+. .+.-. ||.|..|-....-.+..-..-...|..++-. ....+
T Consensus 135 ~~~---~-------------~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G--~~hs~ 193 (282)
T 3qhy_B 135 VPA---E-------------AQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGG--IFHSL 193 (282)
T ss_dssp CCG---G-------------GGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEE
T ss_pred CCc---c-------------CCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEec--CCEEE
Confidence 110 0 11257777654432 33334 7999999765422111101112456676654 34445
Q ss_pred EEEeCCCeEEEEecc
Q 017421 286 YSGSDDNLCKVNSVL 300 (372)
Q Consensus 286 ~s~~~dg~i~vwd~~ 300 (372)
+. .||.|..|-..
T Consensus 194 al--~~G~v~~wG~n 206 (282)
T 3qhy_B 194 AL--KDGKVIAWGDN 206 (282)
T ss_dssp EE--ETTEEEEEECC
T ss_pred EE--ECCeEEEEECC
Confidence 54 59999999765
No 379
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.71 E-value=2.4e+02 Score=26.98 Aligned_cols=70 Identities=14% Similarity=0.202 Sum_probs=42.1
Q ss_pred ceEEEEE----CCCCC--EEEEEeCCCcEE-EEeCCCCe------EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCe
Q 017421 126 RAYVSQF----SADGS--LFVAGFQASQIR-IYDVERGW------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (372)
Q Consensus 126 ~v~~~~~----s~~~~--~l~~~~~dg~i~-vwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 192 (372)
..+.|+. .++++ .+..|..+|.|. +....... .+...........+|..+.++++..+|++++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 3445544 33443 466788999874 43322211 12222223344567999999999999999998876
Q ss_pred EEE
Q 017421 193 VHI 195 (372)
Q Consensus 193 i~v 195 (372)
++|
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 380
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.59 E-value=5.7e+02 Score=24.90 Aligned_cols=64 Identities=13% Similarity=-0.075 Sum_probs=36.9
Q ss_pred CCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCeEEEEeeeccc----CCcceEEEEECCC-CCEEEEEe
Q 017421 124 TSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKIQKDILAKS----LRWTVTDTSLSPD-QRHLVYAS 188 (372)
Q Consensus 124 ~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~ 188 (372)
.+.|.+|+++|. ...+.++...+.|...+ +.+........... ....+.+++++|. .+.++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 468999999995 45566666666665544 33433333221111 1235899999984 34454444
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.28 E-value=4e+02 Score=22.66 Aligned_cols=161 Identities=9% Similarity=0.059 Sum_probs=87.0
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEe---CCC------CeEEEEeeecccCCcceEEE-EECC--CCCEEEEEeCCCeEE
Q 017421 127 AYVSQFSADGSLFVAGFQASQIRIYD---VER------GWKIQKDILAKSLRWTVTDT-SLSP--DQRHLVYASMSPIVH 194 (372)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~vwd---~~~------~~~~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~ 194 (372)
+..+........|+.-+..|.++-.. +.. |..+.....+.. ...|.++ ...+ +...++..+.+|.++
T Consensus 44 ~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 44 VAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 43343334445555556667655443 332 222111122222 2345444 4442 578899999999999
Q ss_pred EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC--C---------CeEEE
Q 017421 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE--A---------NKLSL 263 (372)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~--~---------~~~~~ 263 (372)
...+..-..... .....+.+.. ...+..+........|+..+..|.+..+... . |....
T Consensus 123 r~~l~~~~~~~r----~G~~~i~lke------~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i 192 (327)
T 3uc1_A 123 KSKLTDFDSNRS----GGIVAVNLRD------NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGM 192 (327)
T ss_dssp EEEGGGGCCCCS----SCEESCBCCT------TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESS
T ss_pred EeEHHHhhcccc----CceEEEEECC------CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeee
Confidence 888654221110 0001111111 1245445444455678888889998888766 2 11212
Q ss_pred EeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421 264 RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL 300 (372)
Q Consensus 264 ~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~ 300 (372)
.+. ....|.++... +.+..++..+..|.++.-.+.
T Consensus 193 ~L~-~~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 193 RFN-IDDRLLSLNVV-REGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CCC-TTCCEEEEEEC-CTTCEEEEEETTSEEEEEEGG
T ss_pred cCC-CCCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHH
Confidence 222 33457776665 556688888999999988875
Done!