Query         017421
Match_columns 372
No_of_seqs    455 out of 3540
Neff          10.5
Searched_HMMs 13730
Date          Mon Mar 25 14:09:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017421.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017421hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0   1E-34 7.4E-39  256.6  32.8  230  100-353    34-279 (311)
  2 d1tbga_ b.69.4.1 (A:) beta1-su 100.0   1E-31 7.6E-36  238.2  30.0  248   70-340    35-340 (340)
  3 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 2.3E-30 1.7E-34  230.9  34.8  235   92-351    58-304 (337)
  4 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 6.2E-31 4.5E-35  233.1  30.9  227  118-354    49-312 (340)
  5 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 1.5E-31 1.1E-35  241.9  27.2  209  124-354     7-243 (371)
  6 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 4.9E-31 3.6E-35  238.5  28.6  225  100-345    25-275 (371)
  7 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0   1E-29 7.5E-34  224.2  30.3  224   93-342    66-311 (311)
  8 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 1.7E-29 1.2E-33  220.9  28.5  219  118-346     6-258 (299)
  9 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 2.6E-29 1.9E-33  224.0  30.2  222   92-341   104-335 (337)
 10 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 6.3E-29 4.6E-33  224.9  31.3  236   92-354    69-350 (388)
 11 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 3.7E-28 2.7E-32  212.2  31.4  245   84-354    11-289 (317)
 12 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 1.2E-27   9E-32  208.8  30.4  213  116-354     9-247 (317)
 13 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 1.3E-27 9.4E-32  211.9  27.0  214  119-354    57-293 (325)
 14 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 2.9E-27 2.1E-31  213.9  28.7  223  100-342   139-386 (388)
 15 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 1.4E-27   1E-31  208.4  25.2  236   83-342     5-298 (299)
 16 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 1.4E-26   1E-30  210.6  27.0  226  119-354     9-331 (393)
 17 d1nexb2 b.69.4.1 (B:370-744) C  99.9 6.8E-26 4.9E-30  201.0  26.3  237  100-348    29-317 (355)
 18 d2ovrb2 b.69.4.1 (B:2365-2706)  99.9   3E-25 2.2E-29  195.7  29.0  221  112-351     4-297 (342)
 19 d1pgua1 b.69.4.1 (A:2-326) Act  99.9   1E-25 7.4E-30  199.6  25.4  219  100-341    83-325 (325)
 20 d1pgua2 b.69.4.1 (A:327-613) A  99.9   1E-26 7.6E-31  201.8  18.3  202  118-341     7-286 (287)
 21 d1yfqa_ b.69.4.2 (A:) Cell cyc  99.9 1.4E-25 9.8E-30  197.6  24.9  228  119-352     6-291 (342)
 22 d1sq9a_ b.69.4.1 (A:) Antivira  99.9 3.6E-25 2.6E-29  201.2  23.6  211  102-324    87-353 (393)
 23 d1p22a2 b.69.4.1 (A:253-545) F  99.9   2E-24 1.5E-28  186.2  25.7  202  119-340    10-293 (293)
 24 d2ovrb2 b.69.4.1 (B:2365-2706)  99.9   4E-24 2.9E-28  188.4  25.8  237   80-343     6-340 (342)
 25 d1nexb2 b.69.4.1 (B:370-744) C  99.9 1.6E-23 1.2E-27  185.5  27.7  213  118-347     6-276 (355)
 26 d1k32a3 b.69.9.1 (A:320-679) T  99.9 5.8E-24 4.2E-28  189.6  20.4  172  104-299    24-207 (360)
 27 d1k32a3 b.69.9.1 (A:320-679) T  99.9 1.9E-22 1.4E-26  179.6  21.5  186  129-344     7-210 (360)
 28 d1hzua2 b.70.2.1 (A:118-543) C  99.9 4.2E-22 3.1E-26  182.7  23.2  252  100-354    38-408 (426)
 29 d1yfqa_ b.69.4.2 (A:) Cell cyc  99.9 1.2E-20 8.9E-25  165.4  20.8  220  100-341    29-321 (342)
 30 d1pgua2 b.69.4.1 (A:327-613) A  99.9 2.5E-20 1.8E-24  161.0  22.1  152  129-299   123-286 (287)
 31 d1qksa2 b.70.2.1 (A:136-567) C  99.8 9.3E-19 6.8E-23  160.4  27.5  192  100-299    38-236 (432)
 32 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.8 7.1E-18 5.2E-22  145.8  28.3  238  102-351    10-283 (301)
 33 d1p22a2 b.69.4.1 (A:253-545) F  99.8 7.6E-19 5.5E-23  150.6  19.8  190  100-298    31-293 (293)
 34 d1pbyb_ b.69.2.2 (B:) Quinohem  99.8 5.6E-18   4E-22  148.7  25.6  223  102-352     9-319 (337)
 35 d1qksa2 b.70.2.1 (A:136-567) C  99.8 5.3E-18 3.9E-22  155.3  24.4  193  137-350    33-245 (432)
 36 d1jmxb_ b.69.2.2 (B:) Quinohem  99.8 4.3E-18 3.2E-22  149.9  20.4  210  130-352     2-331 (346)
 37 d1hzua2 b.70.2.1 (A:118-543) C  99.7 5.3E-17 3.9E-21  148.3  20.0  193  138-351    34-246 (426)
 38 d1pbyb_ b.69.2.2 (B:) Quinohem  99.7 1.5E-15 1.1E-19  132.8  23.7  148  137-300     2-162 (337)
 39 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.7 1.5E-14 1.1E-18  124.4  27.5  206  139-353     5-243 (301)
 40 d1ri6a_ b.69.11.1 (A:) Putativ  99.7 7.4E-15 5.4E-19  128.4  25.0  232  101-352    11-270 (333)
 41 d2madh_ b.69.2.1 (H:) Methylam  99.7 1.4E-14 9.9E-19  129.1  26.0  223  121-353    17-360 (373)
 42 d2bbkh_ b.69.2.1 (H:) Methylam  99.6 4.1E-15   3E-19  131.4  18.0  221  127-353    49-342 (355)
 43 d1jmxb_ b.69.2.2 (B:) Quinohem  99.6 1.1E-14 8.1E-19  127.7  20.3  201  100-303    14-324 (346)
 44 d1ri6a_ b.69.11.1 (A:) Putativ  99.5 3.4E-13 2.5E-17  117.6  20.8  172  138-324     6-194 (333)
 45 d2bbkh_ b.69.2.1 (H:) Methylam  99.4 1.3E-11 9.3E-16  108.5  22.2  209  130-353     7-299 (355)
 46 d1mdah_ b.69.2.1 (H:) Methylam  99.4 4.3E-12 3.1E-16  112.8  17.9  216  129-352    69-355 (368)
 47 d2madh_ b.69.2.1 (H:) Methylam  99.4 1.1E-10 7.9E-15  103.3  24.1  186  129-316    70-371 (373)
 48 d2bgra1 b.70.3.1 (A:39-508) Di  99.3 7.3E-11 5.3E-15  108.2  21.8   98  103-205    35-146 (470)
 49 d2bgra1 b.70.3.1 (A:39-508) Di  99.3 4.6E-11 3.4E-15  109.6  19.4  142  129-291    21-191 (470)
 50 d1qnia2 b.69.3.1 (A:10-450) Ni  99.1   3E-09 2.2E-13   94.9  20.5  195  121-342    68-341 (441)
 51 d1qnia2 b.69.3.1 (A:10-450) Ni  99.1 4.1E-09   3E-13   94.0  18.8  184  139-344    14-290 (441)
 52 d2hqsa1 b.68.4.1 (A:163-431) T  99.1   4E-07 2.9E-11   75.9  30.7  210  113-348    27-252 (269)
 53 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.1 1.6E-08 1.2E-12   86.7  21.2  225   93-325    35-272 (302)
 54 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.0 8.9E-08 6.5E-12   81.9  24.8  188  126-333    29-235 (302)
 55 d1mdah_ b.69.2.1 (H:) Methylam  99.0 2.8E-09 2.1E-13   94.1  14.9  183  124-324    19-229 (368)
 56 d1jofa_ b.69.10.1 (A:) 3-carbo  98.9 2.8E-07   2E-11   81.0  24.6  158  171-345   146-343 (365)
 57 d1jofa_ b.69.10.1 (A:) 3-carbo  98.9 1.9E-07 1.4E-11   82.1  23.4  177  124-300   144-340 (365)
 58 d1q7fa_ b.68.9.1 (A:) Brain tu  98.9 4.8E-07 3.5E-11   76.3  24.8  111  226-345   155-275 (279)
 59 d1rwia_ b.68.9.1 (A:) Serine/t  98.9 2.5E-07 1.8E-11   77.2  22.5  179  125-324    57-241 (260)
 60 d1rwia_ b.68.9.1 (A:) Serine/t  98.8 5.3E-07 3.8E-11   75.1  21.8  180  124-324    13-199 (260)
 61 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.8 5.3E-06 3.9E-10   71.1  26.7  199  125-349    40-263 (319)
 62 d1xfda1 b.70.3.1 (A:127-591) D  98.7 1.6E-07 1.1E-11   85.4  16.8  200  131-349    23-295 (465)
 63 d1pjxa_ b.68.6.1 (A:) Diisopro  98.7 3.2E-06 2.3E-10   72.3  23.6  180  126-324    72-285 (314)
 64 d1k32a2 b.68.7.1 (A:39-319) Tr  98.7 2.6E-06 1.9E-10   71.1  22.7  101  131-246     5-113 (281)
 65 d2hqsa1 b.68.4.1 (A:163-431) T  98.7 8.7E-06 6.3E-10   67.4  24.4  180  113-316    71-267 (269)
 66 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.6 3.1E-05 2.3E-09   66.1  27.1  200  107-325    62-293 (319)
 67 d2ghsa1 b.68.6.1 (A:20-314) Re  98.6   5E-05 3.6E-09   64.0  26.4  198  107-324    41-258 (295)
 68 d1q7fa_ b.68.9.1 (A:) Brain tu  98.5   2E-05 1.4E-09   66.0  23.5  160  123-302   112-274 (279)
 69 d1xfda1 b.70.3.1 (A:127-591) D  98.5 2.7E-06   2E-10   77.0  17.8  192  126-322    62-321 (465)
 70 d1pjxa_ b.68.6.1 (A:) Diisopro  98.5 8.7E-06 6.3E-10   69.5  19.2  159  127-300   119-298 (314)
 71 d2ghsa1 b.68.6.1 (A:20-314) Re  98.3 0.00021 1.6E-08   60.0  24.9  185  128-333    21-226 (295)
 72 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.7  0.0025 1.8E-07   55.1  19.4  189  129-344    89-360 (459)
 73 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.6  0.0053 3.9E-07   53.0  19.4  182  139-342    16-305 (459)
 74 d1k32a2 b.68.7.1 (A:39-319) Tr  97.4 0.00072 5.3E-08   55.5  11.2   87  235-324     6-112 (281)
 75 d1k3ia3 b.69.1.1 (A:151-537) G  96.8  0.0078 5.7E-07   51.7  13.1  159  127-300    22-211 (387)
 76 d1npea_ b.68.5.1 (A:) Nidogen   96.6    0.12 8.6E-06   41.7  27.4  199  124-349    35-244 (263)
 77 d1npea_ b.68.5.1 (A:) Nidogen   96.6    0.13 9.2E-06   41.5  21.8  171  137-324     2-184 (263)
 78 d1qfma1 b.69.7.1 (A:1-430) Pro  96.4    0.25 1.8E-05   42.8  26.5  107  123-245   123-250 (430)
 79 d1ijqa1 b.68.5.1 (A:377-642) L  96.0    0.29 2.1E-05   39.3  28.9  160  123-300    28-194 (266)
 80 d1v04a_ b.68.6.2 (A:) Serum pa  95.9    0.38 2.8E-05   40.2  22.6  185  127-324    37-269 (340)
 81 d1kv9a2 b.70.1.1 (A:1-560) Qui  95.8    0.19 1.4E-05   45.3  16.9   52  238-290   468-521 (560)
 82 d1v04a_ b.68.6.2 (A:) Serum pa  95.5    0.57 4.1E-05   39.1  17.9  155  174-344    39-238 (340)
 83 d2ad6a1 b.70.1.1 (A:1-571) Met  95.5    0.85 6.2E-05   41.0  19.9  192  129-324   239-525 (571)
 84 d2ad6a1 b.70.1.1 (A:1-571) Met  95.4    0.39 2.9E-05   43.3  17.3   50  238-288   474-525 (571)
 85 d1kb0a2 b.70.1.1 (A:1-573) Qui  95.4    0.54 3.9E-05   42.4  18.2   69  137-206   129-205 (573)
 86 d1kb0a2 b.70.1.1 (A:1-573) Qui  95.2    0.36 2.6E-05   43.6  16.5   51  238-289   487-539 (573)
 87 d1crua_ b.68.2.1 (A:) Soluble   95.1     0.8 5.8E-05   39.8  18.0   57  124-180    26-87  (450)
 88 d1flga_ b.70.1.1 (A:) Ethanol   94.8     1.3 9.5E-05   39.8  19.7   74  249-324   466-547 (582)
 89 d1k3ia3 b.69.1.1 (A:151-537) G  94.8    0.18 1.3E-05   42.7  12.6  115  172-300    22-155 (387)
 90 d1utca2 b.69.6.1 (A:4-330) Cla  94.6    0.88 6.4E-05   36.8  23.6  198  129-351    67-294 (327)
 91 d1qfma1 b.69.7.1 (A:1-430) Pro  94.2    0.39 2.9E-05   41.5  13.5  103  168-288   123-250 (430)
 92 d1h6la_ b.68.3.1 (A:) Thermost  94.1     1.3 9.5E-05   36.9  22.0  196  134-351    38-272 (353)
 93 d1flga_ b.70.1.1 (A:) Ethanol   94.0     1.9 0.00014   38.6  18.2   51  237-288   495-547 (582)
 94 d1crua_ b.68.2.1 (A:) Soluble   93.9     1.7 0.00012   37.6  17.2   60  171-238    28-87  (450)
 95 d1kv9a2 b.70.1.1 (A:1-560) Qui  93.8     1.4  0.0001   39.4  16.8   74  249-324   438-519 (560)
 96 d1ijqa1 b.68.5.1 (A:377-642) L  93.7     1.3 9.5E-05   35.2  24.4  170  138-324     3-181 (266)
 97 d1xipa_ b.69.14.1 (A:) Nucleop  92.9     1.4  0.0001   37.0  14.3  142  125-287    87-229 (381)
 98 d1w6sa_ b.70.1.1 (A:) Methanol  91.6     4.5 0.00032   36.2  18.0   50  238-288   483-534 (596)
 99 d1utca2 b.69.6.1 (A:4-330) Cla  91.5     2.9 0.00021   33.7  22.3  163  125-296   148-323 (327)
100 d1xipa_ b.69.14.1 (A:) Nucleop  91.3     3.5 0.00026   34.5  22.1  173  125-325    37-231 (381)
101 d1w6sa_ b.70.1.1 (A:) Methanol  90.8     5.4 0.00039   35.7  22.5  113  145-264   181-348 (596)
102 d1h6la_ b.68.3.1 (A:) Thermost  84.3     9.7  0.0007   31.3  15.9  131  126-265   129-271 (353)
103 d2hu7a1 b.69.7.2 (A:9-321) Acy  74.4      15  0.0011   27.7  20.3   38  171-209   105-142 (313)
104 d1tl2a_ b.67.1.1 (A:) Tachylec  62.5      26  0.0019   25.8  14.0  148  125-288    40-198 (235)
105 d1zgka1 b.68.11.1 (A:322-609)   58.3      35  0.0026   25.9  10.3   57  147-206    20-85  (288)
106 d1zgka1 b.68.11.1 (A:322-609)   55.6      39  0.0029   25.6   9.8   60  239-300   196-266 (288)
107 d1wp5a_ b.68.10.1 (A:) Topoiso  48.0      62  0.0045   25.7  19.9  185  127-321    95-300 (323)
108 d1olza2 b.69.12.1 (A:3-480) Se  35.3 1.2E+02  0.0089   25.4  11.8   72  124-195   394-475 (478)
109 d1wp5a_ b.68.10.1 (A:) Topoiso  32.7 1.1E+02  0.0079   24.1  24.4  166  126-300    40-224 (323)
110 d1c8ua2 d.38.1.3 (A:116-286) T  31.7      24  0.0018   25.1   4.2   27  229-255   145-171 (171)
111 d1dlpa1 b.78.1.1 (A:1-115) Fet  31.4      29  0.0021   22.9   4.2   47  271-322    56-102 (115)
112 d1tl2a_ b.67.1.1 (A:) Tachylec  31.4      91  0.0067   22.8  13.9  139  170-324    40-198 (235)
113 d2hu7a1 b.69.7.2 (A:9-321) Acy  29.4 1.1E+02  0.0078   23.0  22.4  144  125-300   104-267 (313)
114 d2nt0a1 b.71.1.2 (A:1-77,A:432  28.6      84  0.0061   21.5   7.6   49  228-278    88-141 (143)
115 d1q47a_ b.69.12.1 (A:) Semapho  27.5      78  0.0057   26.9   7.5   59  137-195   422-487 (495)
116 d1c8ua2 d.38.1.3 (A:116-286) T  22.6      23  0.0016   25.2   2.5   25  127-151   146-170 (171)

No 1  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=1e-34  Score=256.62  Aligned_cols=230  Identities=15%  Similarity=0.136  Sum_probs=197.8

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP  179 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~  179 (372)
                      ...+..+.+|..........+.+|...|++++|+|+|++||+|+.||+|+|||+.++...... ....|..+|.+++|+|
T Consensus        34 ~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~v~~s~  112 (311)
T d1nr0a1          34 YCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT-TIPVFSGPVKDISWDS  112 (311)
T ss_dssp             EEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE-EEECSSSCEEEEEECT
T ss_pred             EEeCCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccc-ccccccCccccccccc
Confidence            344556778888777777788999999999999999999999999999999999887543322 2456778999999999


Q ss_pred             CCCEEEEEeC--CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCE-EEEEeCCCeEEEEEC
Q 017421          180 DQRHLVYASM--SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE-LVAGSSDDCIYVYDL  256 (372)
Q Consensus       180 ~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~-l~s~s~dg~i~iwd~  256 (372)
                      ++++|++++.  +..+++|++++++......                +|...|++++|+|++++ |++|+.|+.|++||+
T Consensus       113 d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~----------------~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~  176 (311)
T d1nr0a1         113 ESKRIAAVGEGRERFGHVFLFDTGTSNGNLT----------------GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG  176 (311)
T ss_dssp             TSCEEEEEECCSSCSEEEEETTTCCBCBCCC----------------CCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred             ccccccccccccccccccccccccccccccc----------------ccccccccccccccceeeecccccccccccccc
Confidence            9999999886  4569999999876543322                57779999999999875 788999999999999


Q ss_pred             CCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-------------ccCCCCCeeEEEeccCCCeEEE
Q 017421          257 EANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-------------LTRSINPCNKYLFNPCNKYLII  323 (372)
Q Consensus       257 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-------------~~~~~~~v~~~~~s~~g~~l~~  323 (372)
                      ++++....+..|...|+++.|+ |++++|++++.|+.|++||++.             ..+|...|++++|+|++++|++
T Consensus       177 ~~~~~~~~~~~~~~~i~~v~~~-p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t  255 (311)
T d1nr0a1         177 PPFKFKSTFGEHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS  255 (311)
T ss_dssp             TTBEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccC-ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEE
Confidence            9999999999999999999999 8999999999999999999862             1257889999999999999998


Q ss_pred             EeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421          324 YLILVISIYSPNILLDNYFLLRTFYSFMVH  353 (372)
Q Consensus       324 ~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h  353 (372)
                      ++      .|+.|++||+.+++.++.+..|
T Consensus       256 gs------~Dg~v~iwd~~t~~~~~~l~~~  279 (311)
T d1nr0a1         256 AS------ADKTIKIWNVATLKVEKTIPVG  279 (311)
T ss_dssp             EE------TTSEEEEEETTTTEEEEEEECC
T ss_pred             Ee------CCCeEEEEECCCCcEEEEEECC
Confidence            86      6899999999999999888765


No 2  
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1e-31  Score=238.20  Aligned_cols=248  Identities=18%  Similarity=0.230  Sum_probs=202.7

Q ss_pred             cccCCCCCccccceeeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEE
Q 017421           70 KEVPGKRHLPVSTVKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVA  141 (372)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  141 (372)
                      ...+...+......+.|.||...     |++.+.+   .+.|..+++|+.........+..|...|.+++|+|+++++++
T Consensus        35 ~~~~~~~~~~~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~  114 (340)
T d1tbga_          35 NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC  114 (340)
T ss_dssp             TTSCCCCCCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEE
T ss_pred             hccCcccccceeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeee
Confidence            34444555667788899999884     5666643   556778999998888777888999999999999999999999


Q ss_pred             EeCCCcEEEEeCCCCeEE----EE--------------------------------------eeecccCCcceEEEEECC
Q 017421          142 GFQASQIRIYDVERGWKI----QK--------------------------------------DILAKSLRWTVTDTSLSP  179 (372)
Q Consensus       142 ~~~dg~i~vwd~~~~~~~----~~--------------------------------------~~~~~~~~~~v~~~~~~~  179 (372)
                      |+.|+.+.+|+.......    ..                                      ......+...+....+.+
T Consensus       115 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (340)
T d1tbga_         115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP  194 (340)
T ss_dssp             EETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred             ecccceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccc
Confidence            999999999997643110    00                                      000112333577888899


Q ss_pred             CCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 017421          180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN  259 (372)
Q Consensus       180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~  259 (372)
                      .+.++++++.|+.|++||+++++......                +|...|++++|+|++++|++|+.|+.|++||++..
T Consensus       195 ~~~~~~~~~~d~~v~i~d~~~~~~~~~~~----------------~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~  258 (340)
T d1tbga_         195 DTRLFVSGACDASAKLWDVREGMCRQTFT----------------GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD  258 (340)
T ss_dssp             TSSEEEEEETTTEEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             ccceeEEeecCceEEEEECCCCcEEEEEe----------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc
Confidence            99999999999999999999887654432                46779999999999999999999999999999998


Q ss_pred             eEEEEee--cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEE
Q 017421          260 KLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISI  331 (372)
Q Consensus       260 ~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~  331 (372)
                      .....+.  .+...|.+++|+ +++++|++|+.||.|++||+.+      +.+|..+|++++|+|++++|++++      
T Consensus       259 ~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s------  331 (340)
T d1tbga_         259 QELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS------  331 (340)
T ss_dssp             EEEEEECCTTCCSCEEEEEEC-SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE------
T ss_pred             ccccccccccccCceEEEEEC-CCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEc------
Confidence            8776654  466789999999 9999999999999999999873      457999999999999999999886      


Q ss_pred             eeceEEEee
Q 017421          332 YSPNILLDN  340 (372)
Q Consensus       332 ~d~~i~lw~  340 (372)
                      .|++|++||
T Consensus       332 ~Dg~v~iWd  340 (340)
T d1tbga_         332 WDSFLKIWN  340 (340)
T ss_dssp             TTSCEEEEC
T ss_pred             cCCEEEEeC
Confidence            689999997


No 3  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-30  Score=230.87  Aligned_cols=235  Identities=15%  Similarity=0.127  Sum_probs=196.2

Q ss_pred             ccCCCCcc--ccCCceeEeeeeeCCCCCc-----cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 017421           92 NYSGRGRF--SAADCCHMLSRYLPVNGPW-----PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL  164 (372)
Q Consensus        92 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  164 (372)
                      .|++.+.+  +++++.+++|++.......     ...+|.+.|.+++|+|++++|++|+.||.|++||+........ ..
T Consensus        58 ~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~-~~  136 (337)
T d1gxra_          58 TISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK-AE  136 (337)
T ss_dssp             EECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEE-EE
T ss_pred             EECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccc-cc
Confidence            45666654  5557788899876544332     2357899999999999999999999999999999876533222 22


Q ss_pred             cccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE
Q 017421          165 AKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA  244 (372)
Q Consensus       165 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s  244 (372)
                      ...|...+..+.|+|++..+++++.++.|++|++.+++......                +|...|.+++|++++..+++
T Consensus       137 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~----------------~~~~~v~~l~~s~~~~~~~~  200 (337)
T d1gxra_         137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----------------GHTDGASCIDISNDGTKLWT  200 (337)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc----------------cccccccccccccccccccc
Confidence            45677789999999999999999999999999999887543332                46679999999999999999


Q ss_pred             EeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc-----cCCCCCeeEEEeccCCC
Q 017421          245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL-----TRSINPCNKYLFNPCNK  319 (372)
Q Consensus       245 ~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~v~~~~~s~~g~  319 (372)
                      ++.|+.|++||+++++.+..+. |...|.+++|+ |++++|++++.|+.|++||++..     ..|...|++++|+|+|+
T Consensus       201 ~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~  278 (337)
T d1gxra_         201 GGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK  278 (337)
T ss_dssp             EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSS
T ss_pred             ccccccccccccccceeecccc-cccceEEEEEc-ccccccceeccccccccccccccccccccccccccceEEECCCCC
Confidence            9999999999999999877765 88999999999 99999999999999999999743     37888999999999999


Q ss_pred             eEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421          320 YLIIYLILVISIYSPNILLDNYFLLRTFYSFM  351 (372)
Q Consensus       320 ~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~  351 (372)
                      +|++++      .|+.|++||+.+++.+..+.
T Consensus       279 ~l~s~s------~Dg~i~iwd~~~~~~~~~~~  304 (337)
T d1gxra_         279 WFVSTG------KDNLLNAWRTPYGASIFQSK  304 (337)
T ss_dssp             EEEEEE------TTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEEe------CCCeEEEEECCCCCEEEEcc
Confidence            999886      68999999999999887654


No 4  
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=6.2e-31  Score=233.15  Aligned_cols=227  Identities=18%  Similarity=0.222  Sum_probs=188.5

Q ss_pred             ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421          118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD  197 (372)
Q Consensus       118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd  197 (372)
                      ..+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..+..   ...|..+|.+++|+|+++++++++.|+.+.+|+
T Consensus        49 ~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~---~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE---EECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             EEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEE---EecccccEEeeEeeccceeeeeecccceeeccc
Confidence            45789999999999999999999999999999999999977665   456778999999999999999999999999999


Q ss_pred             CCCCceeeecce-eecccccc-----------eeccC-----------------CCCccccEEEEEEcCCCCEEEEEeCC
Q 017421          198 VGSGTMESLANV-TEIHDGLD-----------FSAAD-----------------DGGYSFGIFSLKFSTDGRELVAGSSD  248 (372)
Q Consensus       198 ~~~~~~~~~~~~-~~~~~~~~-----------~~~~~-----------------~~~h~~~i~~~~~sp~~~~l~s~s~d  248 (372)
                      ............ ...+....           .....                 ...+...+....+.+.+.++++++.|
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  205 (340)
T d1tbga_         126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD  205 (340)
T ss_dssp             SSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecC
Confidence            765543211110 00010000           00000                 02355678889999999999999999


Q ss_pred             CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc--------cCCCCCeeEEEeccCCCe
Q 017421          249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL--------TRSINPCNKYLFNPCNKY  320 (372)
Q Consensus       249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~v~~~~~s~~g~~  320 (372)
                      +.|++||+++++++..+.+|...|++++|+ |++++|++|+.|+.|++||++..        ..+...|.+++|+|++++
T Consensus       206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~-p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  284 (340)
T d1tbga_         206 ASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL  284 (340)
T ss_dssp             TEEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCE
T ss_pred             ceEEEEECCCCcEEEEEeCCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCE
Confidence            999999999999999999999999999999 99999999999999999999732        256678999999999999


Q ss_pred             EEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421          321 LIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       321 l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~  354 (372)
                      |++++      .|++|++||+.+++.+..+.+|.
T Consensus       285 l~~g~------~dg~i~iwd~~~~~~~~~~~~H~  312 (340)
T d1tbga_         285 LLAGY------DDFNCNVWDALKADRAGVLAGHD  312 (340)
T ss_dssp             EEEEE------TTSCEEEEETTTCCEEEEECCCS
T ss_pred             EEEEE------CCCEEEEEECCCCcEEEEEcCCC
Confidence            99886      68999999999999999999884


No 5  
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.5e-31  Score=241.94  Aligned_cols=209  Identities=12%  Similarity=0.098  Sum_probs=176.8

Q ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 017421          124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM  203 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  203 (372)
                      ..+|+|++|+|||++||+|+.||.|+||++.+++... ...+.+|..+|.+++|+|++++|++++.|+.|++||+.++..
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~-~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ-VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEE-EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEE-EEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            4679999999999999999999999999998775332 334568999999999999999999999999999999987765


Q ss_pred             eeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE----EEEeecCCCCeEEEEEeC
Q 017421          204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL----SLRILAHTSDVNTVCFGD  279 (372)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~sp  279 (372)
                      .......              +|...|.+++|+|+++.|++++.|+.|++|++.....    ......|...|.+++|+ 
T Consensus        86 ~~~~~~~--------------~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~-  150 (371)
T d1k8kc_          86 KPTLVIL--------------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH-  150 (371)
T ss_dssp             EEEEECC--------------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC-
T ss_pred             ccccccc--------------cccccccccccccccccceeecccCcceeeeeeccccccccccccccccccccccccc-
Confidence            4333221              3666899999999999999999999999999876542    23345688999999999 


Q ss_pred             CCCCEEEEEeCCCeEEEEeccc------------------------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeece
Q 017421          280 ESGHLIYSGSDDNLCKVNSVLL------------------------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPN  335 (372)
Q Consensus       280 ~~~~~l~s~~~dg~i~vwd~~~------------------------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~  335 (372)
                      |++++|++|+.|+.|++||+..                        ...|...|.+++|+|+|++|++++      .|+.
T Consensus       151 p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~------~d~~  224 (371)
T d1k8kc_         151 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS------HDST  224 (371)
T ss_dssp             TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE------TTTE
T ss_pred             ccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccc------cCCc
Confidence            8999999999999999999751                        125677899999999999999886      6899


Q ss_pred             EEEeecccceEEEEEeeeE
Q 017421          336 ILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       336 i~lw~~~~~~~~~~~~~h~  354 (372)
                      |++||+.+++.+..+.+|.
T Consensus       225 i~iwd~~~~~~~~~~~~~~  243 (371)
T d1k8kc_         225 VCLADADKKMAVATLASET  243 (371)
T ss_dssp             EEEEEGGGTTEEEEEECSS
T ss_pred             ceEEeeecccceeeeeccc
Confidence            9999999999998887773


No 6  
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=4.9e-31  Score=238.51  Aligned_cols=225  Identities=12%  Similarity=0.057  Sum_probs=182.4

Q ss_pred             ccCCceeEeeeeeCCC--CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421          100 SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL  177 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  177 (372)
                      .+.+..+.+|+.....  ....+.+|.++|.+++|+|++++|++|+.|++|+|||+.++..... ....+|...|+++.|
T Consensus        25 ~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~-~~~~~~~~~v~~i~~  103 (371)
T d1k8kc_          25 CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT-LVILRINRAARCVRW  103 (371)
T ss_dssp             ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE-EECCCCSSCEEEEEE
T ss_pred             EeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccc-ccccccccccccccc
Confidence            4455678888876543  3455789999999999999999999999999999999987754433 334567778999999


Q ss_pred             CCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 017421          178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE  257 (372)
Q Consensus       178 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~  257 (372)
                      +|+++.|++++.|+.|++|++.............            .+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus       104 ~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~------------~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~  171 (371)
T d1k8kc_         104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIK------------KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY  171 (371)
T ss_dssp             CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC------------TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred             ccccccceeecccCcceeeeeecccccccccccc------------cccccccccccccccccceeccccCcEEEEEeec
Confidence            9999999999999999999987765432221111            1467799999999999999999999999999975


Q ss_pred             CC------------------eEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEE
Q 017421          258 AN------------------KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYL  313 (372)
Q Consensus       258 ~~------------------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~  313 (372)
                      ..                  +.+.....|...|.+++|+ |++++|++++.|+.|++||+..      +..|..+|.+++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~  250 (371)
T d1k8kc_         172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVT  250 (371)
T ss_dssp             CTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEE
T ss_pred             cCccccccccccccccccceeeeeeccCccCcEEEEEee-cccccccccccCCcceEEeeecccceeeeecccccceeee
Confidence            42                  3455667889999999999 8999999999999999999873      447888999999


Q ss_pred             eccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421          314 FNPCNKYLIIYLILVISIYSPNILLDNYFLLR  345 (372)
Q Consensus       314 ~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~  345 (372)
                      |+|++++|+++       +|+.+++|.+....
T Consensus       251 fs~d~~~la~g-------~d~~~~~~~~~~~~  275 (371)
T d1k8kc_         251 FITESSLVAAG-------HDCFPVLFTYDSAA  275 (371)
T ss_dssp             EEETTEEEEEE-------TTSSCEEEEEETTT
T ss_pred             ecCCCCEEEEE-------cCCceEEEEeeCCC
Confidence            99999999988       46666666554443


No 7  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.97  E-value=1e-29  Score=224.21  Aligned_cols=224  Identities=13%  Similarity=0.054  Sum_probs=179.3

Q ss_pred             cCCCCcc---ccCCceeEeeeeeCCCCC--ccccCCCCceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCeEEEEeeec
Q 017421           93 YSGRGRF---SAADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILA  165 (372)
Q Consensus        93 ~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~  165 (372)
                      +++++.+   .+.|..+.+|+.......  ..+..|..+|.+++|+|++++|++++.  +..++||++++++....   .
T Consensus        66 ~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~---l  142 (311)
T d1nr0a1          66 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN---L  142 (311)
T ss_dssp             ECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBC---C
T ss_pred             EeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccccccccccccccc---c
Confidence            5666654   556778889988776654  346789999999999999999999875  45699999998765544   5


Q ss_pred             ccCCcceEEEEECCCCCE-EEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE
Q 017421          166 KSLRWTVTDTSLSPDQRH-LVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA  244 (372)
Q Consensus       166 ~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s  244 (372)
                      .+|...|.+++|+|++++ |++|+.|+.|++||+++++......                +|..+|+++.|+|++++|++
T Consensus       143 ~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~----------------~~~~~i~~v~~~p~~~~l~~  206 (311)
T d1nr0a1         143 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----------------EHTKFVHSVRYNPDGSLFAS  206 (311)
T ss_dssp             CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC----------------CCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccceeeecccccccccccccccccccccccc----------------cccccccccccCcccccccc
Confidence            678888999999999885 7889999999999999877544332                46779999999999999999


Q ss_pred             EeCCCeEEEEECCCCeEEEEee-------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc------CCC-CCee
Q 017421          245 GSSDDCIYVYDLEANKLSLRIL-------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT------RSI-NPCN  310 (372)
Q Consensus       245 ~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~------~~~-~~v~  310 (372)
                      ++.|+.|++||+.++.....+.       +|...|++++|+ |++++|++|+.||.|+|||+++.+      .+. ....
T Consensus       207 ~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s-~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~  285 (311)
T d1nr0a1         207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ  285 (311)
T ss_dssp             EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccce
Confidence            9999999999999988777654       578899999999 999999999999999999987432      222 1223


Q ss_pred             EEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421          311 KYLFNPCNKYLIIYLILVISIYSPNILLDNYF  342 (372)
Q Consensus       311 ~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~  342 (372)
                      .+.+.++++.|++++      .|+.|++||.+
T Consensus       286 ~~~~~~~~~~l~s~s------~dG~i~~wd~d  311 (311)
T d1nr0a1         286 QLGIIWTKQALVSIS------ANGFINFVNPE  311 (311)
T ss_dssp             EEEEEECSSCEEEEE------TTCCEEEEETT
T ss_pred             EEEEEecCCEEEEEE------CCCEEEEEeCC
Confidence            344555566777665      58999999863


No 8  
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.97  E-value=1.7e-29  Score=220.88  Aligned_cols=219  Identities=17%  Similarity=0.175  Sum_probs=171.8

Q ss_pred             ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421          118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD  197 (372)
Q Consensus       118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd  197 (372)
                      ..+.||.+.|++++|+|++++|++|+.||.|++||+.++..+..  ....|...|++++|+|++++ ++++.|+.+++|+
T Consensus         6 ~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~--~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~   82 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV--FPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVP   82 (299)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC--SSCSCSSCEEEEEECTTSCE-EEEETTTEEEEEC
T ss_pred             eEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE--EcCCCCCcEEEEEeecccee-ecccceeeEEEec
Confidence            45789999999999999999999999999999999998866654  23467888999999999874 5567799999999


Q ss_pred             CCCCceeeecceeec----ccccceeccCC--------------------CCccccEEEEEEcCCCCEEEEEeCCCeEEE
Q 017421          198 VGSGTMESLANVTEI----HDGLDFSAADD--------------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYV  253 (372)
Q Consensus       198 ~~~~~~~~~~~~~~~----~~~~~~~~~~~--------------------~~h~~~i~~~~~sp~~~~l~s~s~dg~i~i  253 (372)
                      ...............    ...+.+.++..                    ......+.+++|+|++++|++|+.|+.|++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~  162 (299)
T d1nr0a2          83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHV  162 (299)
T ss_dssp             SSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            865432211111111    11122222211                    012346788999999999999999999999


Q ss_pred             EECCCCeEEE-EeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc---------ccCCCCCeeEEEeccCCCeEEE
Q 017421          254 YDLEANKLSL-RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL---------LTRSINPCNKYLFNPCNKYLII  323 (372)
Q Consensus       254 wd~~~~~~~~-~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~v~~~~~s~~g~~l~~  323 (372)
                      ||+++++... ....|...|++++|+ |++++|++++.|+.|++||+..         +..|..+|++++|+|++++|++
T Consensus       163 ~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s  241 (299)
T d1nr0a2         163 YKLSGASVSEVKTIVHPAEITSVAFS-NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT  241 (299)
T ss_dssp             EEEETTEEEEEEEEECSSCEEEEEEC-TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccceEE
Confidence            9998877543 344689999999999 8999999999999999999862         3467889999999999999998


Q ss_pred             EeeeeEEEeeceEEEeecccceE
Q 017421          324 YLILVISIYSPNILLDNYFLLRT  346 (372)
Q Consensus       324 ~~~~~~~~~d~~i~lw~~~~~~~  346 (372)
                      ++      .|+.|++||+.+++.
T Consensus       242 gs------~dg~i~iwd~~~~~~  258 (299)
T d1nr0a2         242 GS------LDNSVIVWNMNKPSD  258 (299)
T ss_dssp             EE------TTSCEEEEETTCTTS
T ss_pred             Ec------CCCEEEEEECCCCCc
Confidence            86      689999999887643


No 9  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.6e-29  Score=224.00  Aligned_cols=222  Identities=14%  Similarity=0.135  Sum_probs=187.2

Q ss_pred             ccCCCCcc---ccCCceeEeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc
Q 017421           92 NYSGRGRF---SAADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK  166 (372)
Q Consensus        92 ~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  166 (372)
                      .+++++.+   .+.+..+.+|+......  ...+..|...+.+++|+|++.++++++.|+.|++|++.++.....   ..
T Consensus       104 ~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~---~~  180 (337)
T d1gxra_         104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ---FQ  180 (337)
T ss_dssp             EECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---EC
T ss_pred             EEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc
Confidence            34555543   44567788888654432  345678999999999999999999999999999999998866554   45


Q ss_pred             cCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe
Q 017421          167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS  246 (372)
Q Consensus       167 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s  246 (372)
                      .|...|.+++|++++..+++++.|+.+++||+++++......                 |...|.+++|+|++++|++++
T Consensus       181 ~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-----------------~~~~i~~l~~~~~~~~l~~~~  243 (337)
T d1gxra_         181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-----------------FTSQIFSLGYCPTGEWLAVGM  243 (337)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccceeecccc-----------------cccceEEEEEcccccccceec
Confidence            677789999999999999999999999999999887643322                 445899999999999999999


Q ss_pred             CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeE
Q 017421          247 SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYL  321 (372)
Q Consensus       247 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l  321 (372)
                      .|+.|++||+++++.. ....|...|++++|+ |++++|++++.||.|++||+....     .|...|.+++|+|++++|
T Consensus       244 ~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s-~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l  321 (337)
T d1gxra_         244 ESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA-YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYI  321 (337)
T ss_dssp             TTSCEEEEETTSSCEE-EECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEE
T ss_pred             cccccccccccccccc-cccccccccceEEEC-CCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEE
Confidence            9999999999988765 456799999999999 999999999999999999987433     578899999999999999


Q ss_pred             EEEeeeeEEEeeceEEEeec
Q 017421          322 IIYLILVISIYSPNILLDNY  341 (372)
Q Consensus       322 ~~~~~~~~~~~d~~i~lw~~  341 (372)
                      ++++      .|++|++||+
T Consensus       322 ~t~s------~D~~I~vWdl  335 (337)
T d1gxra_         322 VTGS------GDKKATVYEV  335 (337)
T ss_dssp             EEEE------TTSCEEEEEE
T ss_pred             EEEe------CCCeEEEEEE
Confidence            9886      6899999986


No 10 
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=6.3e-29  Score=224.95  Aligned_cols=236  Identities=20%  Similarity=0.210  Sum_probs=191.2

Q ss_pred             ccCCCCcc--ccCCceeEeeeeeCCCCCc------------------cccCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Q 017421           92 NYSGRGRF--SAADCCHMLSRYLPVNGPW------------------PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIY  151 (372)
Q Consensus        92 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw  151 (372)
                      .|++++.+  .+.|+.+++|+........                  ....|...|++++|+|++++|++|+.||.|++|
T Consensus        69 ~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~  148 (388)
T d1erja_          69 KFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW  148 (388)
T ss_dssp             EECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             EECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecccccccccc
Confidence            35666654  4557788888875543222                  224577889999999999999999999999999


Q ss_pred             eCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEE
Q 017421          152 DVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIF  231 (372)
Q Consensus       152 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~  231 (372)
                      +...++.+..   ..+|...|.++.|++++..+++++.++.+++||..+........                 +.....
T Consensus       149 ~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----------------~~~~~~  208 (388)
T d1erja_         149 DIENRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-----------------IEDGVT  208 (388)
T ss_dssp             ETTTTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEE
T ss_pred             cccccccccc---cccccccccccccccccccccccccceeeeeeeccccccccccc-----------------cccccc
Confidence            9998876655   56788899999999999999999999999999999876543332                 112344


Q ss_pred             EEEEc-CCCCEEEEEeCCCeEEEEECCCCeEEEEee-------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc-
Q 017421          232 SLKFS-TDGRELVAGSSDDCIYVYDLEANKLSLRIL-------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL-  302 (372)
Q Consensus       232 ~~~~s-p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~-  302 (372)
                      ++.++ +++++|++++.|+.|++||++++.....+.       +|...|++++|+ |++++|++++.|+.|++||++.. 
T Consensus       209 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s-~~~~~l~s~~~d~~i~iwd~~~~~  287 (388)
T d1erja_         209 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNAN  287 (388)
T ss_dssp             EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEEC----
T ss_pred             cccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEEC-CCCCEEEEEECCCcEEEEeccCCc
Confidence            45554 578999999999999999999987766543       578899999999 99999999999999999998622 


Q ss_pred             -----------------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421          303 -----------------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       303 -----------------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~  354 (372)
                                       ..|...|.+++|+|+|++|++++      .|+.|++||+.+++.+..+.+|.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~------~dg~i~vwd~~~~~~~~~l~~H~  350 (388)
T d1erja_         288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS------KDRGVLFWDKKSGNPLLMLQGHR  350 (388)
T ss_dssp             -----------CEEEEEECCSSCEEEEEECGGGCEEEEEE------TTSEEEEEETTTCCEEEEEECCS
T ss_pred             cccccccccccceeeecccccceEEEEEECCCCCEEEEEe------CCCEEEEEECCCCcEEEEEeCCC
Confidence                             25678899999999999999886      68999999999999999998883


No 11 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97  E-value=3.7e-28  Score=212.16  Aligned_cols=245  Identities=18%  Similarity=0.206  Sum_probs=211.6

Q ss_pred             eeeecccCc-----cCCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 017421           84 KMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER  155 (372)
Q Consensus        84 ~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~  155 (372)
                      ..|.||...     |++.+.+   .+.|..+++|+.........+.+|...|.+++|+|++.+++++..++.+.+|+...
T Consensus        11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (317)
T d1vyhc1          11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG   90 (317)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccc
Confidence            456777663     4555543   45677899999988888888999999999999999999999999999999999887


Q ss_pred             CeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE
Q 017421          156 GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF  235 (372)
Q Consensus       156 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~  235 (372)
                      ......   ...|...+.++.|+|+++.+++++.|+.+++||++++.......                +|...+.+++|
T Consensus        91 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~  151 (317)
T d1vyhc1          91 FECIRT---MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT----------------GHREWVRMVRP  151 (317)
T ss_dssp             SCEEEC---CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----------------CCSSCEEEEEE
T ss_pred             cccccc---cccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEc----------------cCCCcceeeec
Confidence            755443   55677789999999999999999999999999999887644332                46668999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCC--------------------CCEEEEEeCCCeEE
Q 017421          236 STDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES--------------------GHLIYSGSDDNLCK  295 (372)
Q Consensus       236 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~--------------------~~~l~s~~~dg~i~  295 (372)
                      +|++++|++++.|+.|++|++.+++....+..|...+.+++|+ ++                    +.++++++.|+.|+
T Consensus       152 ~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  230 (317)
T d1vyhc1         152 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA-PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK  230 (317)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-CSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred             ccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEe-eccccceeeccccceeeeeccCCceeEeccCCCEEE
Confidence            9999999999999999999999999999999999999999998 43                    35789999999999


Q ss_pred             EEeccc------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421          296 VNSVLL------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       296 vwd~~~------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~  354 (372)
                      +||+++      +..|...|.+++|+|++++|++++      .|+.|++||+.+++.+..+.+|.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~h~  289 (317)
T d1vyhc1         231 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA------DDKTLRVWDYKNKRCMKTLNAHE  289 (317)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE------TTTEEEEECCTTSCCCEEEECCS
T ss_pred             EEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEE------CCCeEEEEECCCCcEEEEEcCCC
Confidence            999874      447889999999999999999886      68999999999999999999884


No 12 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96  E-value=1.2e-27  Score=208.81  Aligned_cols=213  Identities=18%  Similarity=0.166  Sum_probs=186.4

Q ss_pred             CCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421          116 GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI  195 (372)
Q Consensus       116 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  195 (372)
                      ....+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++.+..   ...|...|.++.|+|++.+++++..++.+.+
T Consensus         9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~---~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~   85 (317)
T d1vyhc1           9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLASCSADMTIKL   85 (317)
T ss_dssp             CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE---ECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred             ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEE---EeCCCCcEEEEeeeccccccccccccccccc
Confidence            3467899999999999999999999999999999999998876654   5578889999999999999999999999999


Q ss_pred             EECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEE
Q 017421          196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV  275 (372)
Q Consensus       196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~  275 (372)
                      |+...........                +|...+.++.|+|+++.+++++.|+.+++||+++++....+.+|...+.++
T Consensus        86 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (317)
T d1vyhc1          86 WDFQGFECIRTMH----------------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV  149 (317)
T ss_dssp             EETTSSCEEECCC----------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred             ccccccccccccc----------------cccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceee
Confidence            9988776533332                466789999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEeccCCC--------------------eEEEEeeeeE
Q 017421          276 CFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFNPCNK--------------------YLIIYLILVI  329 (372)
Q Consensus       276 ~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s~~g~--------------------~l~~~~~~~~  329 (372)
                      +|+ +++.+|++++.|+.|++|+++.      +..+...+..+.|+|++.                    ++++++    
T Consensus       150 ~~~-~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  224 (317)
T d1vyhc1         150 RPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----  224 (317)
T ss_dssp             EEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE----
T ss_pred             ecc-cCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEecc----
Confidence            999 9999999999999999999873      347788899999988753                    344443    


Q ss_pred             EEeeceEEEeecccceEEEEEeeeE
Q 017421          330 SIYSPNILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       330 ~~~d~~i~lw~~~~~~~~~~~~~h~  354 (372)
                        .|+.|++|+..+++.+..+.+|.
T Consensus       225 --~d~~i~~~~~~~~~~~~~~~~~~  247 (317)
T d1vyhc1         225 --RDKTIKMWDVSTGMCLMTLVGHD  247 (317)
T ss_dssp             --TTSEEEEEETTTTEEEEEEECCS
T ss_pred             --CCCEEEEEECCCCcEEEEEeCCC
Confidence              58999999999999999988873


No 13 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96  E-value=1.3e-27  Score=211.92  Aligned_cols=214  Identities=13%  Similarity=0.082  Sum_probs=171.2

Q ss_pred             cccCC-CCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeEEE-----EeeecccCCcceEEEEECCCCCEEEEEeC-
Q 017421          119 PVDQT-TSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQ-----KDILAKSLRWTVTDTSLSPDQRHLVYASM-  189 (372)
Q Consensus       119 ~~~~~-~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  189 (372)
                      .+.+| ...|++++|+|  ++++|++|+.||+|+|||+..+....     .......|..+|.+++|+++++++++++. 
T Consensus        57 ~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~  136 (325)
T d1pgua1          57 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG  136 (325)
T ss_dssp             EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred             EEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeecc
Confidence            45666 56799999998  57899999999999999986542111     11123456778999999999999988765 


Q ss_pred             -CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCeEEEEee-
Q 017421          190 -SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE-LVAGSSDDCIYVYDLEANKLSLRIL-  266 (372)
Q Consensus       190 -dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~-  266 (372)
                       ++.+.+|+.++++......                +|...|.+++|+|++.+ +++++.|+.|++||+.+.+....+. 
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  200 (325)
T d1pgua1         137 RDNFGVFISWDSGNSLGEVS----------------GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT  200 (325)
T ss_dssp             SSCSEEEEETTTCCEEEECC----------------SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS
T ss_pred             ccceEEEEeecccccceeee----------------ecccccccccccccccceEEEeecccccccccccccccceeccc
Confidence             6789999999887644433                57779999999999865 6789999999999999887666654 


Q ss_pred             --cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEEec---cCCCeEEEEeeeeEEEeece
Q 017421          267 --AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYLFN---PCNKYLIIYLILVISIYSPN  335 (372)
Q Consensus       267 --~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~~s---~~g~~l~~~~~~~~~~~d~~  335 (372)
                        .|...|++++|+|..+.+|++++.|+.|++||+++      +..|..++..+.|+   |+|++|++++      .|+.
T Consensus       201 ~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s------~D~~  274 (325)
T d1pgua1         201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG------ADAT  274 (325)
T ss_dssp             SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE------TTSE
T ss_pred             ccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEe------CCCe
Confidence              56778999999944689999999999999999873      34667777666665   7888988876      7999


Q ss_pred             EEEeecccceEEEEEeeeE
Q 017421          336 ILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       336 i~lw~~~~~~~~~~~~~h~  354 (372)
                      |+|||+.+++.++.+.+|.
T Consensus       275 i~iwd~~~~~~~~~~~~~~  293 (325)
T d1pgua1         275 IRVWDVTTSKCVQKWTLDK  293 (325)
T ss_dssp             EEEEETTTTEEEEEEECCT
T ss_pred             EEEEECCCCCEEEEEEecC
Confidence            9999999999999887764


No 14 
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96  E-value=2.9e-27  Score=213.90  Aligned_cols=223  Identities=18%  Similarity=0.180  Sum_probs=177.9

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEEC-
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS-  178 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-  178 (372)
                      .+.+..+++|+.........+.+|...|.+++|++++..+++++.++.+++||..+......   ...+.. ...+.+. 
T Consensus       139 ~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~-~~~~~~~~  214 (388)
T d1erja_         139 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT---LSIEDG-VTTVAVSP  214 (388)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECSSC-EEEEEECS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccc---cccccc-cccccccC
Confidence            45566788888877777777889999999999999999999999999999999998865544   223333 4445555 


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 017421          179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA  258 (372)
Q Consensus       179 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~  258 (372)
                      +++++|++++.|+.|++||..++...........         ...+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus       215 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---------~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~  285 (388)
T d1erja_         215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE---------SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN  285 (388)
T ss_dssp             TTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             CCCCeEEEEcCCCeEEEeecccCccceeeccccc---------cccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccC
Confidence            4889999999999999999998876443322111         1125778999999999999999999999999999976


Q ss_pred             Ce------------EEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------ccCCCCCeeEEE------e
Q 017421          259 NK------------LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------LTRSINPCNKYL------F  314 (372)
Q Consensus       259 ~~------------~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~v~~~~------~  314 (372)
                      +.            .......|...|.+++|+ +++++|++|+.||.|++||+++      +++|...|.+++      |
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~  364 (388)
T d1erja_         286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT-QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSL  364 (388)
T ss_dssp             -------------CEEEEEECCSSCEEEEEEC-GGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTT
T ss_pred             CccccccccccccceeeecccccceEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCccc
Confidence            53            234455788999999999 9999999999999999999873      457899999887      4


Q ss_pred             ccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421          315 NPCNKYLIIYLILVISIYSPNILLDNYF  342 (372)
Q Consensus       315 s~~g~~l~~~~~~~~~~~d~~i~lw~~~  342 (372)
                      +|++++|++++      .|++|++|++.
T Consensus       365 spd~~~l~s~s------~Dg~I~iW~~~  386 (388)
T d1erja_         365 GPEYNVFATGS------GDCKARIWKYK  386 (388)
T ss_dssp             CTTCEEEEEEE------TTSEEEEEEEE
T ss_pred             CCCCCEEEEEe------CCCEEEEEeee
Confidence            67899999886      68999999975


No 15 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.96  E-value=1.4e-27  Score=208.45  Aligned_cols=236  Identities=15%  Similarity=0.100  Sum_probs=175.2

Q ss_pred             eeeeecccC-----ccCCCCcc---ccCCceeEeeeeeCCCCCccc-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Q 017421           83 VKMLAGREG-----NYSGRGRF---SAADCCHMLSRYLPVNGPWPV-DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDV  153 (372)
Q Consensus        83 ~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~  153 (372)
                      .+++.||..     .+++++.+   .+.|..+++|+.........+ ..|...|.+++|+|++++ ++++.|+.+++|+.
T Consensus         5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~   83 (299)
T d1nr0a2           5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPA   83 (299)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECS
T ss_pred             ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecccceeeEEEecc
Confidence            456677765     34666544   456678889987666555555 479999999999999985 45667899999997


Q ss_pred             CCCeE-------------EEEee------------------------ecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421          154 ERGWK-------------IQKDI------------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV  196 (372)
Q Consensus       154 ~~~~~-------------~~~~~------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw  196 (372)
                      .....             .....                        ........+.+++|+|++++|++++.||.|++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~  163 (299)
T d1nr0a2          84 GGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVY  163 (299)
T ss_dssp             SSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred             CCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            53210             00000                        000122357788999999999999999999999


Q ss_pred             ECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE---EEeecCCCCeE
Q 017421          197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS---LRILAHTSDVN  273 (372)
Q Consensus       197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~v~  273 (372)
                      |++++........               .|...|++++|+|++++|++++.|+.|++||+.++...   ..+..|...|+
T Consensus       164 d~~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~  228 (299)
T d1nr0a2         164 KLSGASVSEVKTI---------------VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA  228 (299)
T ss_dssp             EEETTEEEEEEEE---------------ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred             ccccccccccccc---------------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9987765332221               25568999999999999999999999999999877543   34557889999


Q ss_pred             EEEEeCCCCCEEEEEeCCCeEEEEeccccc---------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421          274 TVCFGDESGHLIYSGSDDNLCKVNSVLLLT---------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYF  342 (372)
Q Consensus       274 ~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~---------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~  342 (372)
                      +++|+ |++++|++|+.||.|++||+++..         .+...+..+.| +++++|++++      .|++|++||+.
T Consensus       229 ~l~~s-~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s------~D~~i~iWdl~  298 (299)
T d1nr0a2         229 CVSWS-PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAG------QDSNIKFWNVP  298 (299)
T ss_dssp             EEEEC-TTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEE------TTSCEEEEECC
T ss_pred             ccccc-ccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEe------CCCEEEEEecc
Confidence            99999 999999999999999999987432         23445666655 5567777775      69999999974


No 16 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95  E-value=1.4e-26  Score=210.56  Aligned_cols=226  Identities=11%  Similarity=0.036  Sum_probs=163.5

Q ss_pred             cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE-------EE------------------------Eeeec--
Q 017421          119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-------IQ------------------------KDILA--  165 (372)
Q Consensus       119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------~~------------------------~~~~~--  165 (372)
                      ..++|.+.|+++++++  +++++++.|++|+|||..+...       ..                        .....  
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~   86 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS   86 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence            3468999999999864  6899999999999998643210       00                        00000  


Q ss_pred             -----------------------------ccCCcceEEEEECCC-----CCEEEEEeCCCeEEEEECCCCceeeeccee-
Q 017421          166 -----------------------------KSLRWTVTDTSLSPD-----QRHLVYASMSPIVHIVDVGSGTMESLANVT-  210 (372)
Q Consensus       166 -----------------------------~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-  210 (372)
                                                   ..+...+..++|.++     +.++++++.||.+++|++............ 
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~  166 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  166 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence                                         011123445666654     457888999999999998543211110000 


Q ss_pred             -ecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe------ecCCCCeEEEEEeCCCCC
Q 017421          211 -EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI------LAHTSDVNTVCFGDESGH  283 (372)
Q Consensus       211 -~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~------~~~~~~v~~~~~sp~~~~  283 (372)
                       ...............+...+.+++|+|++ +|++|+.|++|++||+.+++++..+      .+|..+|.+++|+ |+|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s-pdg~  244 (393)
T d1sq9a_         167 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS-PQGS  244 (393)
T ss_dssp             CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC-SSTT
T ss_pred             eccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccc-cccc
Confidence             00000011111122355578999999997 8899999999999999999876654      3688999999999 9999


Q ss_pred             EEEEEeCCC---eEEEEeccc-------------------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeec
Q 017421          284 LIYSGSDDN---LCKVNSVLL-------------------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNY  341 (372)
Q Consensus       284 ~l~s~~~dg---~i~vwd~~~-------------------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~  341 (372)
                      +|++|+.|+   .|++||+++                   +.+|...|++++|+|+|++|++++      .|++|++||+
T Consensus       245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s------~D~~v~vWd~  318 (393)
T d1sq9a_         245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG------WDGKLRFWDV  318 (393)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE------TTSEEEEEET
T ss_pred             eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEEC------CCCEEEEEEC
Confidence            999999887   499999863                   236899999999999999999887      7999999999


Q ss_pred             ccceEEEEEeeeE
Q 017421          342 FLLRTFYSFMVHI  354 (372)
Q Consensus       342 ~~~~~~~~~~~h~  354 (372)
                      .+++.+..|.+|.
T Consensus       319 ~~g~~~~~l~gH~  331 (393)
T d1sq9a_         319 KTKERITTLNMHC  331 (393)
T ss_dssp             TTTEEEEEEECCG
T ss_pred             CCCCEEEEECCcC
Confidence            9999999999984


No 17 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95  E-value=6.8e-26  Score=201.03  Aligned_cols=237  Identities=13%  Similarity=0.124  Sum_probs=180.6

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP  179 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~  179 (372)
                      .+.|..+++|+....+....+.+|.+.|++++|+|+ .+|++|+.|+.|++|+........... ...+........+.+
T Consensus        29 gs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~  106 (355)
T d1nexb2          29 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYK  106 (355)
T ss_dssp             EETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEEC-CCSSCEEEEEEEEET
T ss_pred             EeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccc-ccccccccccccccc
Confidence            456678999998877777888999999999999985 579999999999999999886655433 333344566778889


Q ss_pred             CCCEEEEEeCCCeEEEEECCCCceeeecceee--------------------c----------ccccceeccC-------
Q 017421          180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTE--------------------I----------HDGLDFSAAD-------  222 (372)
Q Consensus       180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------------~----------~~~~~~~~~~-------  222 (372)
                      ++..+++++.|+.|++||+.+...........                    .          ..........       
T Consensus       107 ~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~  186 (355)
T d1nexb2         107 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVW  186 (355)
T ss_dssp             TEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred             ccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeee
Confidence            99999999999999999997654321110000                    0          0000000000       


Q ss_pred             ----------CCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC
Q 017421          223 ----------DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN  292 (372)
Q Consensus       223 ----------~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg  292 (372)
                                ..++...+.++.|+|++.++++++.|+.|++||++++..+..+.+|...|.+++++   +++|++++.||
T Consensus       187 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~---~~~l~~~~~dg  263 (355)
T d1nexb2         187 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADG  263 (355)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC---SSEEEEECTTS
T ss_pred             ecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc---cceeeeeeccc
Confidence                      12466788899999999999999999999999999999999999999999999986   46999999999


Q ss_pred             eEEEEeccccc----CCCCCeeEE-EeccCCCeEEEEeeeeEEEeeceEEEeecccceEEE
Q 017421          293 LCKVNSVLLLT----RSINPCNKY-LFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFY  348 (372)
Q Consensus       293 ~i~vwd~~~~~----~~~~~v~~~-~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~  348 (372)
                      .|++||++...    .|...+..+ .+++++++++++       .|+.|++||+.+++.++
T Consensus       264 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-------~d~~i~vwd~~tg~~~~  317 (355)
T d1nexb2         264 SIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG-------SENQFNIYNLRSGKLVH  317 (355)
T ss_dssp             EEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEE-------ETTEEEEEETTTCCBCC
T ss_pred             ccccccccccceecccccCCceEEEEEcCCCCEEEEE-------eCCEEEEEECCCCCEEE
Confidence            99999997432    455555554 567888888777       48899999999998775


No 18 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=3e-25  Score=195.72  Aligned_cols=221  Identities=15%  Similarity=0.182  Sum_probs=165.7

Q ss_pred             eCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC
Q 017421          112 LPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP  191 (372)
Q Consensus       112 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  191 (372)
                      -+.+....+++|.+.|.+ +++++|++||+|+.||+|+|||+.+++.+..   ..+|...|.+++|+|+  +|++++.|+
T Consensus         4 ~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~---~~~h~~~V~~v~~~~~--~l~s~s~D~   77 (342)
T d2ovrb2           4 GELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT---LVGHTGGVWSSQMRDN--IIISGSTDR   77 (342)
T ss_dssp             SCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEE---CCCCSSCEEEEEEETT--EEEEEETTS
T ss_pred             CCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEE---EeCCCCCEEEEEeCCC--ccccceecc
Confidence            344556778999999865 4677899999999999999999999877665   5688889999999874  899999999


Q ss_pred             eEEEEECCCCceeeecceeecc--------------------------cc---------------------cceeccCC-
Q 017421          192 IVHIVDVGSGTMESLANVTEIH--------------------------DG---------------------LDFSAADD-  223 (372)
Q Consensus       192 ~i~vwd~~~~~~~~~~~~~~~~--------------------------~~---------------------~~~~~~~~-  223 (372)
                      .+++|+................                          .+                     .......+ 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  157 (342)
T d2ovrb2          78 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF  157 (342)
T ss_dssp             CEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTS
T ss_pred             cccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCC
Confidence            9999998665432211100000                          00                     00000000 


Q ss_pred             ----------------CCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEE
Q 017421          224 ----------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYS  287 (372)
Q Consensus       224 ----------------~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s  287 (372)
                                      .+|...+.  .+++++.++++++.||.|++||++.++++..+..|...+.+++++   +++|++
T Consensus       158 ~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s  232 (342)
T d2ovrb2         158 MVKVWDPETETCLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVS  232 (342)
T ss_dssp             CEEEEEGGGTEEEEEECCCSSCEE--EEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEE
T ss_pred             eEEEeecccceeeEEEcCcccccc--cccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC---CCEEEE
Confidence                            23444444  445578899999999999999999999999999999999998886   369999


Q ss_pred             EeCCCeEEEEeccccc---------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421          288 GSDDNLCKVNSVLLLT---------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM  351 (372)
Q Consensus       288 ~~~dg~i~vwd~~~~~---------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~  351 (372)
                      ++.|+.|++||+....         .|...+.++.++  ++++++++      .|++|++||+.+++.++.+.
T Consensus       233 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s------~Dg~i~iwd~~tg~~i~~~~  297 (342)
T d2ovrb2         233 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSS------DDGTVKLWDLKTGEFIRNLV  297 (342)
T ss_dssp             EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEE------TTSEEEEEETTTCCEEEEEE
T ss_pred             EcCCCEEEEEecccccccccccccceeeeceeecccC--CCeeEEEc------CCCEEEEEECCCCCEEEEEe
Confidence            9999999999986322         345566666554  56787775      69999999999999988775


No 19 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94  E-value=1e-25  Score=199.58  Aligned_cols=219  Identities=9%  Similarity=-0.021  Sum_probs=167.3

Q ss_pred             ccCCceeEeeeeeCCCCCcc--------ccCCCCceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCeEEEEeeecccCC
Q 017421          100 SAADCCHMLSRYLPVNGPWP--------VDQTTSRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLR  169 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~  169 (372)
                      .+.|..+++|+.........        +..|.++|.+++|++++++|++++.  ++.+.+|+.+++..+..   ..+|.
T Consensus        83 gs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~  159 (325)
T d1pgua1          83 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGE---VSGHS  159 (325)
T ss_dssp             EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEE---CCSCS
T ss_pred             EeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeeccccccee---eeecc
Confidence            45667888998865543322        3568899999999999999987754  67899999998876665   56788


Q ss_pred             cceEEEEECCCCCE-EEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC-CCEEEEEeC
Q 017421          170 WTVTDTSLSPDQRH-LVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSS  247 (372)
Q Consensus       170 ~~v~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~-~~~l~s~s~  247 (372)
                      ..|.+++|+|++.+ +++++.|+.+++||....+........             .+|...|.+++|+|+ +.+|++++.
T Consensus       160 ~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-------------~~~~~~v~~v~~~pd~~~~l~s~~~  226 (325)
T d1pgua1         160 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-------------HKQGSFVRDVEFSPDSGEFVITVGS  226 (325)
T ss_dssp             SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-------------SCTTCCEEEEEECSTTCCEEEEEET
T ss_pred             cccccccccccccceEEEeecccccccccccccccceecccc-------------cCCCCccEEeeeccccceecccccc
Confidence            89999999998875 678899999999999876643332211             146678999999997 688999999


Q ss_pred             CCeEEEEECCCCeEEEEeecCCCCeEEEEEeC--CCCCEEEEEeCCCeEEEEeccccc--------CCCCCeeEE--Eec
Q 017421          248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGD--ESGHLIYSGSDDNLCKVNSVLLLT--------RSINPCNKY--LFN  315 (372)
Q Consensus       248 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp--~~~~~l~s~~~dg~i~vwd~~~~~--------~~~~~v~~~--~~s  315 (372)
                      |+.|++||+++++.+..+.+|..++.++.|++  +++++|++++.|+.|+|||+++.+        .+...+..+  .|.
T Consensus       227 d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (325)
T d1pgua1         227 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT  306 (325)
T ss_dssp             TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred             ccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEEC
Confidence            99999999999999999998887765544432  588999999999999999987322        233334444  444


Q ss_pred             cCCCeEEEEeeeeEEEeeceEEEeec
Q 017421          316 PCNKYLIIYLILVISIYSPNILLDNY  341 (372)
Q Consensus       316 ~~g~~l~~~~~~~~~~~d~~i~lw~~  341 (372)
                      +++ +|++++      .|+.|++||+
T Consensus       307 ~~~-~l~s~s------~dg~i~vwdl  325 (325)
T d1pgua1         307 GNG-RIISLS------LDGTLNFYEL  325 (325)
T ss_dssp             ETT-EEEEEE------TTSCEEEEET
T ss_pred             CCC-EEEEEE------CCCEEEEEEC
Confidence            444 455554      5889999985


No 20 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94  E-value=1e-26  Score=201.77  Aligned_cols=202  Identities=14%  Similarity=0.096  Sum_probs=148.0

Q ss_pred             ccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 017421          118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD  197 (372)
Q Consensus       118 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd  197 (372)
                      ..+.+|..+|++++|+|    |++|+.||+|++||+.++        ...|...|.++.++++. .+++++.|+.+++|+
T Consensus         7 ~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~--------~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~   73 (287)
T d1pgua2           7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM--------HQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNG   73 (287)
T ss_dssp             EEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE--------ECCCCSCEEEEECCSTT-CCEEEETTTEEEETT
T ss_pred             EEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC--------CCCCCCCEEEEEecCCC-eEEEEeecccccccc
Confidence            35678888888888887    888888888888887653        23566678888877654 467777777777776


Q ss_pred             CCCC----------------------------------ceeeecceeecccccceecc----------------------
Q 017421          198 VGSG----------------------------------TMESLANVTEIHDGLDFSAA----------------------  221 (372)
Q Consensus       198 ~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~----------------------  221 (372)
                      +...                                  .........  .....+.+.                      
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~  151 (287)
T d1pgua2          74 ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN--SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL  151 (287)
T ss_dssp             EEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred             ccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecccc--ceeeeeeccCcceeeeccccceeeeeecccc
Confidence            5322                                  111110000  000001100                      


Q ss_pred             -----CCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEEeC---------CCCCEEE
Q 017421          222 -----DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGD---------ESGHLIY  286 (372)
Q Consensus       222 -----~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp---------~~~~~l~  286 (372)
                           ....|...+++++|+|++.+|++|+.||.|++||+.+++... .+..|...|.+++|+|         .++.+|+
T Consensus       152 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~  231 (287)
T d1pgua2         152 EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA  231 (287)
T ss_dssp             EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEE
T ss_pred             ceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeE
Confidence                 013467889999999999999999999999999999988654 3568999999999984         3457899


Q ss_pred             EEeCCCeEEEEeccc-------ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeec
Q 017421          287 SGSDDNLCKVNSVLL-------LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNY  341 (372)
Q Consensus       287 s~~~dg~i~vwd~~~-------~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~  341 (372)
                      +|+.|++|++||++.       +.+|...|++++|+|++.++.++       .|+.|++|++
T Consensus       232 sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g-------~D~~v~iW~i  286 (287)
T d1pgua2         232 TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSG-------ADACIKRWNV  286 (287)
T ss_dssp             EEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEE-------TTSCEEEEEE
T ss_pred             eecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEE-------CCCeEEEEEE
Confidence            999999999999863       34789999999999998655444       6899999986


No 21 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94  E-value=1.4e-25  Score=197.63  Aligned_cols=228  Identities=12%  Similarity=0.035  Sum_probs=169.1

Q ss_pred             cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC-CCEEEEEeCCCeEEEEE
Q 017421          119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD-QRHLVYASMSPIVHIVD  197 (372)
Q Consensus       119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd  197 (372)
                      ..++|...|++|+|+|++++||+|+.||+|+|||+..+..........+|..+|.+++|+|+ +.+|++|+.||.|++|+
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence            45789999999999999999999999999999999776544444445578889999999986 45789999999999999


Q ss_pred             CCCCceeeecceeecccc----------cceecc-----------------------CCCCccccEEEEEEcCCCCEEEE
Q 017421          198 VGSGTMESLANVTEIHDG----------LDFSAA-----------------------DDGGYSFGIFSLKFSTDGRELVA  244 (372)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~----------~~~~~~-----------------------~~~~h~~~i~~~~~sp~~~~l~s  244 (372)
                      +..+..............          ......                       ...........+.+.+++..+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (342)
T d1yfqa_          86 LIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV  165 (342)
T ss_dssp             SSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceee
Confidence            987654332221111000          000000                       00111223345566778889999


Q ss_pred             EeCCCeEEEEECCCCeEE---EEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc--------------------
Q 017421          245 GSSDDCIYVYDLEANKLS---LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL--------------------  301 (372)
Q Consensus       245 ~s~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~--------------------  301 (372)
                      ++.|+.|++||+...+..   .....+...+.+..+.|.++..+++++.||.+.+|+...                    
T Consensus       166 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  245 (342)
T d1yfqa_         166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL  245 (342)
T ss_dssp             EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred             ecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeecc
Confidence            999999999999766432   223345556777777767889999999999999998751                    


Q ss_pred             -ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421          302 -LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMV  352 (372)
Q Consensus       302 -~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~  352 (372)
                       ...|...|++++|+|++++|++++      .|+.|++||+.+++.+..+..
T Consensus       246 ~~~~~~~~v~~l~~sp~~~~lasg~------~Dg~v~vWD~~~~~~l~~~~~  291 (342)
T d1yfqa_         246 KDTNLAYPVNSIEFSPRHKFLYTAG------SDGIISCWNLQTRKKIKNFAK  291 (342)
T ss_dssp             TCCSSCCCEEEEEECTTTCCEEEEE------TTSCEEEEETTTTEEEEECCC
T ss_pred             CCCcccccceeEEecCCccEEEEEC------CCCEEEEEECCCCcEEEEecC
Confidence             124566789999999999999886      699999999999998887743


No 22 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94  E-value=3.6e-25  Score=201.15  Aligned_cols=211  Identities=17%  Similarity=0.072  Sum_probs=159.2

Q ss_pred             CCceeEeeeeeCCCCCccc----------cCCCCceEEEEECCCC-----CEEEEEeCCCcEEEEeCCCC----------
Q 017421          102 ADCCHMLSRYLPVNGPWPV----------DQTTSRAYVSQFSADG-----SLFVAGFQASQIRIYDVERG----------  156 (372)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~s~~~-----~~l~~~~~dg~i~vwd~~~~----------  156 (372)
                      .+..+.+|..........+          ..+...++.++|.+++     .++++++.||.+++|++...          
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~  166 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  166 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence            3556677766544332221          2355678888887763     67899999999999997432          


Q ss_pred             -----eEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEE
Q 017421          157 -----WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIF  231 (372)
Q Consensus       157 -----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~  231 (372)
                           ...........+...+.+++|+|++ +|++|+.||.|++||+.+++..........          ..+|..+|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~----------l~~h~~~V~  235 (393)
T d1sq9a_         167 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS----------MINNSNSIR  235 (393)
T ss_dssp             CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------------CCCCCEE
T ss_pred             eccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccc----------cccccceEE
Confidence                 0111112223444568899999997 889999999999999998876443332211          125888999


Q ss_pred             EEEEcCCCCEEEEEeCCC---eEEEEECCCCeEEEEee-------------cCCCCeEEEEEeCCCCCEEEEEeCCCeEE
Q 017421          232 SLKFSTDGRELVAGSSDD---CIYVYDLEANKLSLRIL-------------AHTSDVNTVCFGDESGHLIYSGSDDNLCK  295 (372)
Q Consensus       232 ~~~~sp~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~  295 (372)
                      +++|+|+|++|++|+.|+   .|++||+++++++..+.             +|...|++++|+ |++++|++|+.|++|+
T Consensus       236 ~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fs-pd~~~l~S~s~D~~v~  314 (393)
T d1sq9a_         236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSGETLCSAGWDGKLR  314 (393)
T ss_dssp             EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC-SSSSEEEEEETTSEEE
T ss_pred             EcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccC-CCCCeeEEECCCCEEE
Confidence            999999999999999886   49999999998877764             799999999999 9999999999999999


Q ss_pred             EEeccc------ccCCCCCee----EEEeccCCCeEEEE
Q 017421          296 VNSVLL------LTRSINPCN----KYLFNPCNKYLIIY  324 (372)
Q Consensus       296 vwd~~~------~~~~~~~v~----~~~~s~~g~~l~~~  324 (372)
                      +||+++      +.+|...|.    .++|+|++..++++
T Consensus       315 vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         315 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             EEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence            999974      457777664    58899999887655


No 23 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=2e-24  Score=186.16  Aligned_cols=202  Identities=22%  Similarity=0.239  Sum_probs=148.2

Q ss_pred             cccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 017421          119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV  198 (372)
Q Consensus       119 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~  198 (372)
                      ....|...|+|++  +|+++||+|+.||+|+|||+.+++.+..   +.+|..+|++++|  ++++|++|+.|+.|++|++
T Consensus        10 ~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~---l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2          10 CRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRI---LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             CCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEE---ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred             ccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEE---EecCCCCEeeeec--ccceeeccccccccccccc
Confidence            3456788899865  5799999999999999999999877665   5688889999887  5789999999999999998


Q ss_pred             CCCceeeecceeeccc-------cc-----------c--------------eecc------------------CC-----
Q 017421          199 GSGTMESLANVTEIHD-------GL-----------D--------------FSAA------------------DD-----  223 (372)
Q Consensus       199 ~~~~~~~~~~~~~~~~-------~~-----------~--------------~~~~------------------~~-----  223 (372)
                      ..+.............       ..           .              +..+                  .+     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~  162 (293)
T d1p22a2          83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV  162 (293)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEE
T ss_pred             ccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceee
Confidence            7765432221100000       00           0              0000                  00     


Q ss_pred             ------------CCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCC
Q 017421          224 ------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD  291 (372)
Q Consensus       224 ------------~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d  291 (372)
                                  .++...+..+.++  +..+++++.|+.|++||+++.+.+..+.+|...+..  ++ +++.+|++++.|
T Consensus       163 ~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~-~~~~~l~sg~~d  237 (293)
T d1p22a2         163 WNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IR-FDNKRIVSGAYD  237 (293)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EE-CCSSEEEEEETT
T ss_pred             ecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeee--cc-ccceEEEEEcCC
Confidence                        1344455555554  568889999999999999988888888888777765  44 677899999999


Q ss_pred             CeEEEEecc---------------cccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEee
Q 017421          292 NLCKVNSVL---------------LLTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDN  340 (372)
Q Consensus       292 g~i~vwd~~---------------~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~  340 (372)
                      |.|++||++               ++.+|...|++++|+  +.+|++++      .|++|++||
T Consensus       238 g~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s------~Dg~i~iWD  293 (293)
T d1p22a2         238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSS------HDDTILIWD  293 (293)
T ss_dssp             SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECC------SSSEEEEEC
T ss_pred             CEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEe------cCCEEEEeC
Confidence            999999975               234688899999985  56777775      688888887


No 24 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=4e-24  Score=188.45  Aligned_cols=237  Identities=16%  Similarity=0.164  Sum_probs=170.5

Q ss_pred             ccceeeeecccCcc----CCCCcc---ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEe
Q 017421           80 VSTVKMLAGREGNY----SGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYD  152 (372)
Q Consensus        80 ~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd  152 (372)
                      ..+.++|+||....    +..+.+   .+.|..+++|+....+....+.+|...|.+++|+|+  +|++|+.|+.+++|+
T Consensus         6 ~~~~~~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~   83 (342)
T d2ovrb2           6 LKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWN   83 (342)
T ss_dssp             CCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEE
T ss_pred             CCcCEEECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccc
Confidence            34556677777532    222222   556678999998887777888999999999999874  899999999999999


Q ss_pred             CCCCeEEEEee---------------------------------------------------------------------
Q 017421          153 VERGWKIQKDI---------------------------------------------------------------------  163 (372)
Q Consensus       153 ~~~~~~~~~~~---------------------------------------------------------------------  163 (372)
                      ...........                                                                     
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d  163 (342)
T d2ovrb2          84 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD  163 (342)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEE
T ss_pred             cccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEee
Confidence            76542211100                                                                     


Q ss_pred             --------ecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE
Q 017421          164 --------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF  235 (372)
Q Consensus       164 --------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~  235 (372)
                              ...+|.  .....+.+++.++++++.||.|++||++.++......                +|...+.++++
T Consensus       164 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~----------------~~~~~v~~~~~  225 (342)
T d2ovrb2         164 PETETCLHTLQGHT--NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT----------------GHQSLTSGMEL  225 (342)
T ss_dssp             GGGTEEEEEECCCS--SCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEEC----------------CCCSCEEEEEE
T ss_pred             cccceeeEEEcCcc--cccccccCCCCEEEEEeCCCeEEEeecccceeeeEec----------------ccccceeEEec
Confidence                    000111  1233344567788888889999999988876543332                46668888877


Q ss_pred             cCCCCEEEEEeCCCeEEEEECCCCeEEEEeec---CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc---------
Q 017421          236 STDGRELVAGSSDDCIYVYDLEANKLSLRILA---HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT---------  303 (372)
Q Consensus       236 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~---------  303 (372)
                      ++  ++|++++.|+.|++||+...+....+..   |...+.++.++   ++++++|+.||.|++||+++.+         
T Consensus       226 ~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~  300 (342)
T d2ovrb2         226 KD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLE  300 (342)
T ss_dssp             ET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECT
T ss_pred             CC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC---CCeeEEEcCCCEEEEEECCCCCEEEEEeccc
Confidence            64  6999999999999999999888777764   45566666654   5799999999999999997432         


Q ss_pred             --CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeeccc
Q 017421          304 --RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFL  343 (372)
Q Consensus       304 --~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~  343 (372)
                        +|...|++++|+|++.+++++....  ..+..|++||+..
T Consensus       301 ~~~~~~~v~~v~~s~~~~~la~g~~dG--t~~~~l~~~Df~~  340 (342)
T d2ovrb2         301 SGGSGGVVWRIRASNTKLVCAVGSRNG--TEETKLLVLDFDV  340 (342)
T ss_dssp             TGGGTCEEEEEEECSSEEEEEEECSSS--SSCCEEEEEECCC
T ss_pred             CCCCCCCEEEEEECCCCCEEEEEeCCC--CCeeEEEEEeCCC
Confidence              4667899999999999999885210  0223589998753


No 25 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93  E-value=1.6e-23  Score=185.48  Aligned_cols=213  Identities=16%  Similarity=0.126  Sum_probs=162.1

Q ss_pred             ccccCCCCce-EEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421          118 WPVDQTTSRA-YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV  196 (372)
Q Consensus       118 ~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw  196 (372)
                      ..+++|...| .|++|  ++++|++|+.||+|+|||+.+++.+..   ..+|..+|.+++|+|+ .+|++++.|+.|++|
T Consensus         6 ~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~---l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw   79 (355)
T d1nexb2           6 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQ---LSGHDGGVWALKYAHG-GILVSGSTDRTVRVW   79 (355)
T ss_dssp             EEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEE---EECCSSCEEEEEEETT-TEEEEEETTCCEEEE
T ss_pred             EEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEE---EECCCCCEEEEEEcCC-CEEEEEecccccccc
Confidence            4578998876 55554  688999999999999999999977665   5688899999999985 589999999999999


Q ss_pred             ECCCCceeeecceeecc----------cc-cceeccCC----------------------------------------CC
Q 017421          197 DVGSGTMESLANVTEIH----------DG-LDFSAADD----------------------------------------GG  225 (372)
Q Consensus       197 d~~~~~~~~~~~~~~~~----------~~-~~~~~~~~----------------------------------------~~  225 (372)
                      ++...............          .+ .......+                                        ..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d1nexb2          80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  159 (355)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred             cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence            99877653222111100          00 00000000                                        01


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc----
Q 017421          226 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL----  301 (372)
Q Consensus       226 h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~----  301 (372)
                      |...+  ..+.+++++++++..|+.|++||+++++.+....++...+.++.|+ +++.++++++.|+.|++||+++    
T Consensus       160 ~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~i~d~~~~~~~  236 (355)
T d1nexb2         160 HMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWDLENGELM  236 (355)
T ss_dssp             CSSCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTTCCEE
T ss_pred             ccccc--cccccccceeeeecccceeeeeecccccceeeeecccccccccccc-ccceeeecccccceEEeeeccccccc
Confidence            12222  2345567888999999999999999998888888888999999999 9999999999999999999873    


Q ss_pred             --ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEE
Q 017421          302 --LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTF  347 (372)
Q Consensus       302 --~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~  347 (372)
                        +..|...|.+++|++  ++|++++      .|+.|++||+.++...
T Consensus       237 ~~~~~h~~~v~~~~~~~--~~l~~~~------~dg~i~iwd~~~~~~~  276 (355)
T d1nexb2         237 YTLQGHTALVGLLRLSD--KFLVSAA------ADGSIRGWDANDYSRK  276 (355)
T ss_dssp             EEECCCSSCCCEEEECS--SEEEEEC------TTSEEEEEETTTCCEE
T ss_pred             ccccccccccccccccc--ceeeeee------ccccccccccccccee
Confidence              457889999999875  6787776      6899999999887654


No 26 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.92  E-value=5.8e-24  Score=189.55  Aligned_cols=172  Identities=16%  Similarity=0.071  Sum_probs=136.3

Q ss_pred             ceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCC
Q 017421          104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ  181 (372)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  181 (372)
                      ..+.+|....  ......+|...|.+++|+|||++|++++.+.  .|++||+.++....    ...|...|.+++|+|++
T Consensus        24 g~v~v~d~~~--~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~----~~~~~~~v~~~~~spdg   97 (360)
T d1k32a3          24 GQAFIQDVSG--TYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK----FEENLGNVFAMGVDRNG   97 (360)
T ss_dssp             TEEEEECTTS--SBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE----CCCCCCSEEEEEECTTS
T ss_pred             CeEEEEECCC--CcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE----eeCCCceEEeeeecccc
Confidence            3455554432  2233347999999999999999998766543  79999999874432    55777889999999999


Q ss_pred             CEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe----------CCCeE
Q 017421          182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCI  251 (372)
Q Consensus       182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s----------~dg~i  251 (372)
                      ++|++++.++.+++|++.++.......                .|...+.+++|+|+|++|+.+.          .++.+
T Consensus        98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3          98 KFAVVANDRFEIMTVDLETGKPTVIER----------------SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEE----------------CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             cccceeccccccccccccccceeeeee----------------cccccccchhhccceeeeeeeccccccceeeccccce
Confidence            999999999999999999887654433                2445788999999999998654          34569


Q ss_pred             EEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEec
Q 017421          252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSV  299 (372)
Q Consensus       252 ~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~  299 (372)
                      ++||+.+++.. .+..+...+..++|+ |+|+.|++++.++.+++||.
T Consensus       162 ~v~d~~~~~~~-~~~~~~~~~~~~~~s-pdg~~l~~~s~~~~~~~~d~  207 (360)
T d1k32a3         162 HVYDMEGRKIF-AATTENSHDYAPAFD-ADSKNLYYLSYRSLDPSPDR  207 (360)
T ss_dssp             EEEETTTTEEE-ECSCSSSBEEEEEEC-TTSCEEEEEESCCCCCEECS
T ss_pred             eeeccccCcee-eeccccccccccccc-CCCCEEEEEeCCCceEcccc
Confidence            99999988764 444577788999999 99999999999999998874


No 27 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.90  E-value=1.9e-22  Score=179.55  Aligned_cols=186  Identities=17%  Similarity=0.136  Sum_probs=153.0

Q ss_pred             EEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCC--eEEEEECCCCceee
Q 017421          129 VSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGTMES  205 (372)
Q Consensus       129 ~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~  205 (372)
                      .-.||| ||+++|+++. |.|++||+.++....    . .|...|.+++|+|||++|++++.+.  .|++||.+++....
T Consensus         7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~~----~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~   80 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTYVLK----V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK   80 (360)
T ss_dssp             EEEEEECGGGCEEEEET-TEEEEECTTSSBEEE----C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred             cccccCCCCCEEEEEEC-CeEEEEECCCCcEEE----c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE
Confidence            467999 9999999875 799999998875543    2 5777899999999999998776553  79999999887654


Q ss_pred             ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEE
Q 017421          206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI  285 (372)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l  285 (372)
                      ..                 .|...+.+++|+|+|++|++++.++.+++|++.+++....+..|...+.+++|+ |+|++|
T Consensus        81 ~~-----------------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l  142 (360)
T d1k32a3          81 FE-----------------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS-DNSRFI  142 (360)
T ss_dssp             CC-----------------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC-TTSCEE
T ss_pred             ee-----------------CCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhc-cceeee
Confidence            33                 366689999999999999999999999999999999988888899999999999 999999


Q ss_pred             EEEe----------CCCeEEEEecccc-----cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421          286 YSGS----------DDNLCKVNSVLLL-----TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL  344 (372)
Q Consensus       286 ~s~~----------~dg~i~vwd~~~~-----~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~  344 (372)
                      +.+.          .++.+++||+...     ..+...+..++|+|+|++|+.++      .++.+.+|+....
T Consensus       143 a~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s------~~~~~~~~d~~~~  210 (360)
T d1k32a3         143 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS------YRSLDPSPDRVVL  210 (360)
T ss_dssp             EEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE------SCCCCCEECSSSS
T ss_pred             eeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEe------CCCceEccccccc
Confidence            8653          3456999999743     35667788999999999999775      3556666665444


No 28 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.89  E-value=4.2e-22  Score=182.71  Aligned_cols=252  Identities=10%  Similarity=-0.021  Sum_probs=174.8

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE--EeeecccCCcceEEEEE
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQ--KDILAKSLRWTVTDTSL  177 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~  177 (372)
                      ...+..+.+|+....+....+..| ..+..++|||||++|++++.|+.|++||+.+++...  ......+|...+.++.|
T Consensus        38 ~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~  116 (426)
T d1hzua2          38 LRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFK  116 (426)
T ss_dssp             ETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCST
T ss_pred             EcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeee
Confidence            345678889988877766777766 469999999999999999999999999998875332  22333455566778889


Q ss_pred             CCCCCEEEEE-eCCCeEEEEECCCCceeeecceee-cccccce-----------eccCC---------------------
Q 017421          178 SPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTE-IHDGLDF-----------SAADD---------------------  223 (372)
Q Consensus       178 ~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~---------------------  223 (372)
                      +|||++++++ ..++.+.+||..++.......... ......+           ++...                     
T Consensus       117 spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~  196 (426)
T d1hzua2         117 GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID  196 (426)
T ss_dssp             TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSS
T ss_pred             cCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEecccc
Confidence            9999987655 578999999999887644332111 0000001           00000                     


Q ss_pred             ------CCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCe------------------------------------
Q 017421          224 ------GGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANK------------------------------------  260 (372)
Q Consensus       224 ------~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~~~~------------------------------------  260 (372)
                            .++...+..+.|+|++++++++.. +..+.+++..+++                                    
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  276 (426)
T d1hzua2         197 NLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG  276 (426)
T ss_dssp             SCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTC
T ss_pred             ceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCc
Confidence                  123456678899999988776653 3446666555433                                    


Q ss_pred             ------------------EEEEeecCCCCeEEEEEeCCCCCEEEE-------EeCCCeEEEEeccccc------------
Q 017421          261 ------------------LSLRILAHTSDVNTVCFGDESGHLIYS-------GSDDNLCKVNSVLLLT------------  303 (372)
Q Consensus       261 ------------------~~~~~~~~~~~v~~~~~sp~~~~~l~s-------~~~dg~i~vwd~~~~~------------  303 (372)
                                        ....+.+|...+..++|+ |++++|++       ++.|++|+|||+.+++            
T Consensus       277 ~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~s-Pdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~  355 (426)
T d1hzua2         277 SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTH-PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA  355 (426)
T ss_dssp             EEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECC-TTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred             eEEEeeccccccccccceEeEEEecCCCceeEEEcC-CCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhc
Confidence                              333455677788999999 99999995       4567899999987432            


Q ss_pred             ---CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEeeeE
Q 017421          304 ---RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMVHI  354 (372)
Q Consensus       304 ---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h~  354 (372)
                         .+...|..++|||||++++++.-. ....++.|++||..+++......++.
T Consensus       356 ~~~~~~~rv~~~~fSpDGk~i~vs~~~-~~~~~~~i~v~D~~T~k~~~~i~~~~  408 (426)
T d1hzua2         356 DLGEGAKRVVQPEYNKRGDEVWFSVWN-GKNDSSALVVVDDKTLKLKAVVKDPR  408 (426)
T ss_dssp             CCCSSCCCEEEEEECSSSSEEEEEECC-CTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred             ccCCCCccEEEEEECCCCCEEEEEEec-CCCCCCeEEEEECCCCeEEEEECCCC
Confidence               345668999999999987654200 00136789999999999888776664


No 29 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86  E-value=1.2e-20  Score=165.44  Aligned_cols=220  Identities=10%  Similarity=0.012  Sum_probs=142.8

Q ss_pred             ccCCceeEeeeeeCCCCCccc---cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE
Q 017421          100 SAADCCHMLSRYLPVNGPWPV---DQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT  175 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~  175 (372)
                      .+.|..+++|++........+   .+|..+|.+++|+|++ .+|++|+.|+.|++|++..........  ..+.......
T Consensus        29 ~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~--~~~~~~~~~~  106 (342)
T d1yfqa_          29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT--NNEANLGICR  106 (342)
T ss_dssp             EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB--SCCCCSCEEE
T ss_pred             EECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccc--cccccccccc
Confidence            556788999998776543333   3699999999999864 578999999999999998754333211  1111122233


Q ss_pred             EECCCCCEEEEEeCCCeEEEE------------------------------------------------ECCCCceeeec
Q 017421          176 SLSPDQRHLVYASMSPIVHIV------------------------------------------------DVGSGTMESLA  207 (372)
Q Consensus       176 ~~~~~~~~l~~~~~dg~i~vw------------------------------------------------d~~~~~~~~~~  207 (372)
                      .+.++...+++++.++.+++|                                                |+.........
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  186 (342)
T d1yfqa_         107 ICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT  186 (342)
T ss_dssp             EEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCE
T ss_pred             ccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCccccee
Confidence            333344444555555555555                                                44433321111


Q ss_pred             ceeecccccceeccCCCCccccEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCeE---------EEE------eecCCCC
Q 017421          208 NVTEIHDGLDFSAADDGGYSFGIFSLKFS-TDGRELVAGSSDDCIYVYDLEANKL---------SLR------ILAHTSD  271 (372)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~s-p~~~~l~s~s~dg~i~iwd~~~~~~---------~~~------~~~~~~~  271 (372)
                      ...             ..+...+.+..+. +++..+++++.||.+.+|+......         ...      ...|...
T Consensus       187 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
T d1yfqa_         187 IEE-------------SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP  253 (342)
T ss_dssp             EEE-------------CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred             eee-------------cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCccccc
Confidence            110             0122345555554 4678899999999999999864321         111      1246678


Q ss_pred             eEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeec
Q 017421          272 VNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNY  341 (372)
Q Consensus       272 v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~  341 (372)
                      |++++|+ |++++|++|+.||.|++||+++.+     .....+..++|+|+|+++++++      -|..+++|..
T Consensus       254 v~~l~~s-p~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~------sdd~~~~~~~  321 (342)
T d1yfqa_         254 VNSIEFS-PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT------SDDTFKTNAA  321 (342)
T ss_dssp             EEEEEEC-TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEE------ECTHHHHCSS
T ss_pred             ceeEEec-CCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEE------cCCcEEEeee
Confidence            9999999 999999999999999999997432     2234566788999999998874      3555566654


No 30 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86  E-value=2.5e-20  Score=161.01  Aligned_cols=152  Identities=18%  Similarity=0.212  Sum_probs=122.9

Q ss_pred             EEEECCCCCEEEEEeCCC-cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeec
Q 017421          129 VSQFSADGSLFVAGFQAS-QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLA  207 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~  207 (372)
                      ..+++++++.+++++.++ .+++|++........  ....+..++++++|+|++.+|++++.||.|++||+.++......
T Consensus       123 ~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~  200 (287)
T d1pgua2         123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFD--LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR  200 (287)
T ss_dssp             EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEE--CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC
T ss_pred             eeeeeccCcceeeeccccceeeeeeccccceeee--eeeccCCceeEEEeccCccccccccccccccceeeccccccccc
Confidence            346777888888887765 799999876544332  23456678999999999999999999999999999887653221


Q ss_pred             ceeecccccceeccCCCCccccEEEEEEcCC----------CCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCeEEEE
Q 017421          208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----------GRELVAGSSDDCIYVYDLEA-NKLSLRILAHTSDVNTVC  276 (372)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~----------~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~  276 (372)
                      .               .+|...|.+++|+|+          +.+|++|+.|++|++||+++ .+.+..+.+|...|++++
T Consensus       201 ~---------------~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~  265 (287)
T d1pgua2         201 W---------------AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLL  265 (287)
T ss_dssp             S---------------CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEE
T ss_pred             c---------------cccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEE
Confidence            1               147779999999874          46899999999999999976 556677779999999999


Q ss_pred             EeCCCCCEEEEEeCCCeEEEEec
Q 017421          277 FGDESGHLIYSGSDDNLCKVNSV  299 (372)
Q Consensus       277 ~sp~~~~~l~s~~~dg~i~vwd~  299 (372)
                      |+ +++ .|++++.|+.|++|++
T Consensus       266 ~~-~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         266 WE-TPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EE-ETT-EEEEEETTSCEEEEEE
T ss_pred             EC-CCC-EEEEEECCCeEEEEEE
Confidence            99 665 5889999999999996


No 31 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.84  E-value=9.3e-19  Score=160.36  Aligned_cols=192  Identities=11%  Similarity=-0.013  Sum_probs=135.6

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE--EEEeeecccCCcceEEEEE
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--IQKDILAKSLRWTVTDTSL  177 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~  177 (372)
                      .+.+..+.+|+....+....+..+ ..+..++|||||+++++++.|+.|.+||+.+++.  ........+|...+.+..|
T Consensus        38 ~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~  116 (432)
T d1qksa2          38 LRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKME  116 (432)
T ss_dssp             ETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCST
T ss_pred             EcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEeccc
Confidence            344567788888777777777766 4699999999999999999999999999987642  2332333455556777788


Q ss_pred             CCCCCEE-EEEeCCCeEEEEECCCCceeeecceeec-ccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEE
Q 017421          178 SPDQRHL-VYASMSPIVHIVDVGSGTMESLANVTEI-HDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVY  254 (372)
Q Consensus       178 ~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iw  254 (372)
                      +|||++| +++..++.|++||..+++.......... .....+.      +......+.++|+|..+ ++...++.|.+|
T Consensus       117 SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~  190 (432)
T d1qksa2         117 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH------PEPRVAAILASHYRPEFIVNVKETGKILLV  190 (432)
T ss_dssp             TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE------SCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             CCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceecc------CCCceeEEEECCCCCEEEEEEccCCeEEEE
Confidence            9999986 6777899999999999987654432211 1111222      23467788999999876 456667999999


Q ss_pred             ECCCCeEEEEee-cCCCCeEEEEEeCCCCCEEEEEeC-CCeEEEEec
Q 017421          255 DLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSD-DNLCKVNSV  299 (372)
Q Consensus       255 d~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~  299 (372)
                      |..+.+...... .+...+..++|+ |+|+++++++. ++.+.++|.
T Consensus       191 d~~~~~~~~~~~i~~g~~~~~~~~s-pdg~~~~va~~~~~~v~v~d~  236 (432)
T d1qksa2         191 DYTDLNNLKTTEISAERFLHDGGLD-GSHRYFITAANARNKLVVIDT  236 (432)
T ss_dssp             ETTCSSEEEEEEEECCSSEEEEEEC-TTSCEEEEEEGGGTEEEEEET
T ss_pred             EccCCCcceEEEEcccCccccceEC-CCCCEEEEeccccceEEEeec
Confidence            998876443322 345567788888 88887766654 345666664


No 32 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.82  E-value=7.1e-18  Score=145.78  Aligned_cols=238  Identities=13%  Similarity=0.078  Sum_probs=163.5

Q ss_pred             CCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC
Q 017421          102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD  180 (372)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~  180 (372)
                      .+..+.+|+....+....+. ....+..++|+|||++| ++++.++.|.+||+.+++.+...   ..+. .+..+.|+++
T Consensus        10 ~~~~v~v~D~~t~~~~~~i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~---~~~~-~~~~~~~~~~   84 (301)
T d1l0qa2          10 ESDNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PAGS-SPQGVAVSPD   84 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECSS-SEEEEEECTT
T ss_pred             CCCEEEEEECCCCeEEEEEE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeee---eccc-cccccccccc
Confidence            44556676655544333333 34567899999999987 46677899999999998776653   2333 4789999999


Q ss_pred             CCEEEEE-eCCCeEEEEECCCCceeeecceeecccccceeccCC-------------------------CCccccEEEEE
Q 017421          181 QRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD-------------------------GGYSFGIFSLK  234 (372)
Q Consensus       181 ~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~h~~~i~~~~  234 (372)
                      +..++++ ..++.+.+|+..+++...............+.++..                         ..+...+..+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (301)
T d1l0qa2          85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIA  164 (301)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEE
T ss_pred             cccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEE
Confidence            9876654 557789999998887654433222212222222211                         01233467788


Q ss_pred             EcCCCCEEEEEeCC-CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe---CCCeEEEEeccccc-----CC
Q 017421          235 FSTDGRELVAGSSD-DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS---DDNLCKVNSVLLLT-----RS  305 (372)
Q Consensus       235 ~sp~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~---~dg~i~vwd~~~~~-----~~  305 (372)
                      ++|+++.++++..+ +.+.+|+....+....+. ....+..++|+ +++..+++++   .++.|.+||+.+.+     ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~  242 (301)
T d1l0qa2         165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVN-PEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV  242 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEEC-TTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred             eeccccceeeecccccccccccccceeeeeccc-ccCCcceeecc-ccccccccccccceeeeeeeeecCCCeEEEEEcC
Confidence            88888877766654 567777777776666655 34567789999 8888776654   34689999997543     34


Q ss_pred             CCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421          306 INPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM  351 (372)
Q Consensus       306 ~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~  351 (372)
                      ...+..++|+|||++|+++..     .|++|++||+.+++.+..+.
T Consensus       243 ~~~~~~va~spdg~~l~va~~-----~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         243 GPDPAGIAVTPDGKKVYVALS-----FCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             CSSEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEEEEE
T ss_pred             CCCEEEEEEeCCCCEEEEEEC-----CCCeEEEEECCCCeEEEEEe
Confidence            457899999999998764421     47899999999999888764


No 33 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81  E-value=7.6e-19  Score=150.61  Aligned_cols=190  Identities=19%  Similarity=0.189  Sum_probs=129.2

Q ss_pred             ccCCceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-----------------
Q 017421          100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD-----------------  162 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----------------  162 (372)
                      .+.|..+++|+....+....+.+|.+.|.+++|  ++++|++|+.|+.|++|++..+......                 
T Consensus        31 gs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (293)
T d1p22a2          31 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMM  108 (293)
T ss_dssp             EESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccce
Confidence            566778999999888878889999999999887  5789999999999999998765322211                 


Q ss_pred             -----------------------eecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeec-------
Q 017421          163 -----------------------ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI-------  212 (372)
Q Consensus       163 -----------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------  212 (372)
                                             .....|...+..+.+.  ...+++++.|+.|++||+++++..........       
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~  186 (293)
T d1p22a2         109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY  186 (293)
T ss_dssp             EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred             eecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEcccccccccccC
Confidence                                   0111223334444333  34566666777777777766654433221100       


Q ss_pred             ccccceeccC-----------------CCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CeEEEEee
Q 017421          213 HDGLDFSAAD-----------------DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---------NKLSLRIL  266 (372)
Q Consensus       213 ~~~~~~~~~~-----------------~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~  266 (372)
                      ..........                 ..+|...+..  +++++.+|++|+.||.|++||+..         ..++..+.
T Consensus       187 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  264 (293)
T d1p22a2         187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV  264 (293)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC
T ss_pred             CCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEec
Confidence            0000000000                 0235555654  456788999999999999999753         34678888


Q ss_pred             cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 017421          267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNS  298 (372)
Q Consensus       267 ~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd  298 (372)
                      +|.+.|++++|+   +.+|++++.||+|++||
T Consensus       265 ~H~~~V~~v~~d---~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         265 EHSGRVFRLQFD---EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CCSSCCCCEEEC---SSCEEECCSSSEEEEEC
T ss_pred             CCCCCEEEEEEc---CCEEEEEecCCEEEEeC
Confidence            999999999985   46899999999999998


No 34 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.81  E-value=5.6e-18  Score=148.68  Aligned_cols=223  Identities=11%  Similarity=-0.003  Sum_probs=159.5

Q ss_pred             CCceeEeeeeeCCCCCcccc--CCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeecc--cCCcceEEEE
Q 017421          102 ADCCHMLSRYLPVNGPWPVD--QTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTS  176 (372)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~  176 (372)
                      .+..+.+|+.........+.  .+...+.+++|+|||+++ ++++.++.|.+||+.+++.+.......  .+...+..++
T Consensus         9 ~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~   88 (337)
T d1pbyb_           9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA   88 (337)
T ss_dssp             TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred             CCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEE
Confidence            34566777666554444443  345668899999999987 566788999999999987766543221  1123456899


Q ss_pred             ECCCCCEEEEEeC------------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEE
Q 017421          177 LSPDQRHLVYASM------------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA  244 (372)
Q Consensus       177 ~~~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s  244 (372)
                      |+|++++++++..            +..+.+||..++........                 ...+..++|+|+|+++++
T Consensus        89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~  151 (337)
T d1pbyb_          89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----------------PRQITMLAWARDGSKLYG  151 (337)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----------------CSSCCCEEECTTSSCEEE
T ss_pred             EcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-----------------cCCceEEEEcCCCCEEEE
Confidence            9999999987763            57788999998876444331                 125677899999998888


Q ss_pred             EeCCCeEEEEECCCCeEEEEee----------------------------------------------------------
Q 017421          245 GSSDDCIYVYDLEANKLSLRIL----------------------------------------------------------  266 (372)
Q Consensus       245 ~s~dg~i~iwd~~~~~~~~~~~----------------------------------------------------------  266 (372)
                      ++.+  +.+||..+++....+.                                                          
T Consensus       152 ~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (337)
T d1pbyb_         152 LGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG  229 (337)
T ss_dssp             ESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred             EcCC--cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCC
Confidence            7644  5678777665443321                                                          


Q ss_pred             --------cCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEee
Q 017421          267 --------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYS  333 (372)
Q Consensus       267 --------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d  333 (372)
                              .+...+..+.++ +++.+++.+  ++.|++||+.+.+     .+...+.+++|+|||++|+++.      .|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~------~~  300 (337)
T d1pbyb_         230 EMAMREVRIMDVFYFSTAVN-PAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG------AL  300 (337)
T ss_dssp             CEEEEEEEECSSCEEEEEEC-TTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES------BS
T ss_pred             cEEEEEecCCCcceEEEEec-ccceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEe------CC
Confidence                    122334455666 677777655  5889999998543     4556789999999999999885      68


Q ss_pred             ceEEEeecccceEEEEEee
Q 017421          334 PNILLDNYFLLRTFYSFMV  352 (372)
Q Consensus       334 ~~i~lw~~~~~~~~~~~~~  352 (372)
                      ++|++||..+++.+..+..
T Consensus       301 ~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         301 GDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             SEEEEEETTTCCEEEEEEC
T ss_pred             CcEEEEECCCCcEEEEEEC
Confidence            9999999999999988754


No 35 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.80  E-value=5.3e-18  Score=155.25  Aligned_cols=193  Identities=10%  Similarity=-0.108  Sum_probs=145.1

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeeccccc
Q 017421          137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGL  216 (372)
Q Consensus       137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  216 (372)
                      -++++.+.+|+|.|||..+++.+..+.   .+. .+..++|+|||+++++++.|+.|.+||+.+++......+....   
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~---~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~---  105 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLD---TGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---  105 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEE---CSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEe---CCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCC---
Confidence            345788999999999999998877643   232 5899999999999999999999999999987754333322111   


Q ss_pred             ceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecC-----------CCCeEEEEEeCCCCCE
Q 017421          217 DFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAH-----------TSDVNTVCFGDESGHL  284 (372)
Q Consensus       217 ~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~sp~~~~~  284 (372)
                              +|...+.+..|+|||++| ++++.++.|++||..+++++..+..|           ......+.++ ++|..
T Consensus       106 --------~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s-~dg~~  176 (432)
T d1qksa2         106 --------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS-HYRPE  176 (432)
T ss_dssp             --------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-SSSSE
T ss_pred             --------CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEEC-CCCCE
Confidence                    244566777889999976 67888999999999999988776543           3456678899 77766


Q ss_pred             E-EEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEE
Q 017421          285 I-YSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSF  350 (372)
Q Consensus       285 l-~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~  350 (372)
                      + ++...++.|.+||....+       .+...+..++|+|+|++++++..     .+..+.+++..+++.+..+
T Consensus       177 ~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~-----~~~~v~v~d~~~~~~~~~~  245 (432)
T d1qksa2         177 FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAIE  245 (432)
T ss_dssp             EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEEE
T ss_pred             EEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEecc-----ccceEEEeecccceEEEEe
Confidence            5 556678999999976432       34567789999999999888742     3456677777766665444


No 36 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.79  E-value=4.3e-18  Score=149.95  Aligned_cols=210  Identities=13%  Similarity=0.078  Sum_probs=134.3

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEE-EeCCCeEEEEECCCCceeeecc
Q 017421          130 SQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLAN  208 (372)
Q Consensus       130 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~  208 (372)
                      ++|++++++|++++.+++|.|||+.+++.+.....  .+...+.+++|+|||+++++ +..++.|.+||+.+++......
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~--~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~   79 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   79 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEc--CCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence            57899999999999999999999999977665332  33345789999999998754 5578999999999987654332


Q ss_pred             eee-------cccccceeccCC-----------------------------CCc----------cccEEEEEEcCCCCEE
Q 017421          209 VTE-------IHDGLDFSAADD-----------------------------GGY----------SFGIFSLKFSTDGREL  242 (372)
Q Consensus       209 ~~~-------~~~~~~~~~~~~-----------------------------~~h----------~~~i~~~~~sp~~~~l  242 (372)
                      ...       ...++.++++..                             .+.          ...+..+.+++++..+
T Consensus        80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (346)
T d1jmxb_          80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLY  159 (346)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEE
T ss_pred             ccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEE
Confidence            211       112233333211                             000          0111223333333333


Q ss_pred             EEEeCCCeEEEEECCCCeEEEEe---------------------------------------------------------
Q 017421          243 VAGSSDDCIYVYDLEANKLSLRI---------------------------------------------------------  265 (372)
Q Consensus       243 ~s~s~dg~i~iwd~~~~~~~~~~---------------------------------------------------------  265 (372)
                      +++   +.+.+|++.+++.+..+                                                         
T Consensus       160 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
T d1jmxb_         160 VAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD  236 (346)
T ss_dssp             EES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred             EeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEE
Confidence            221   22344444443332221                                                         


Q ss_pred             -----------ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeE
Q 017421          266 -----------LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVI  329 (372)
Q Consensus       266 -----------~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~  329 (372)
                                 ..|...+..+.++ +++.+++... ++.|.+||+.+.+     .+...+.+++|+|||++|+++.    
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~----  310 (346)
T d1jmxb_         237 LKTGKTHTQEFADLTELYFTGLRS-PKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG----  310 (346)
T ss_dssp             TTTCCEEEEEEEECSSCEEEEEEC-SSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES----
T ss_pred             CCCCceEEEEeecccceeEEEEEe-CCCCEEEEec-CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEe----
Confidence                       1233445556666 4545555443 4679999987433     3446789999999999999886    


Q ss_pred             EEeeceEEEeecccceEEEEEee
Q 017421          330 SIYSPNILLDNYFLLRTFYSFMV  352 (372)
Q Consensus       330 ~~~d~~i~lw~~~~~~~~~~~~~  352 (372)
                        +|+.|++||..+++.+.....
T Consensus       311 --~d~~v~v~D~~t~~~i~~i~~  331 (346)
T d1jmxb_         311 --TFNDLAVFNPDTLEKVKNIKL  331 (346)
T ss_dssp             --BSSEEEEEETTTTEEEEEEEC
T ss_pred             --CCCcEEEEECccCCEEEEEEC
Confidence              789999999999999988763


No 37 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.74  E-value=5.3e-17  Score=148.27  Aligned_cols=193  Identities=10%  Similarity=-0.057  Sum_probs=138.9

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccc
Q 017421          138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLD  217 (372)
Q Consensus       138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  217 (372)
                      ++++.+.||+|+|||+.+++.+..+.   .+. .+..++|+|||+++++++.|+.|++||+.+++......+....    
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~---~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~----  105 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVID---TGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI----  105 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEE---CCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS----
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEe---CCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC----
Confidence            45778889999999999997776632   333 5899999999999999999999999999998764443322211    


Q ss_pred             eeccCCCCccccEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEEEEeecCCCCe-----------EEEEEeCCCCCEE
Q 017421          218 FSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEANKLSLRILAHTSDV-----------NTVCFGDESGHLI  285 (372)
Q Consensus       218 ~~~~~~~~h~~~i~~~~~sp~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~v-----------~~~~~sp~~~~~l  285 (372)
                             +|...+.+++|+|||+++++ +..++.+.+||..++.+...+..|...+           ..+.++ +++..+
T Consensus       106 -------~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s-~d~~~~  177 (426)
T d1hzua2         106 -------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS-HEHPEF  177 (426)
T ss_dssp             -------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC-SSSSEE
T ss_pred             -------CCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEEC-CCCCEE
Confidence                   35556778889999998754 4578999999999998887776554333           445555 555554


Q ss_pred             EEEe-CCCeEEEEecccc-------cCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEe
Q 017421          286 YSGS-DDNLCKVNSVLLL-------TRSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFM  351 (372)
Q Consensus       286 ~s~~-~dg~i~vwd~~~~-------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~  351 (372)
                      +... ..+.+.+++....       ..+...+..+.|+|++++++++..     .+..+.+++..+++.+....
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~-----~~~~~~~~~~~~~~~~~~~~  246 (426)
T d1hzua2         178 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN-----NSNKVAVIDSKDRRLSALVD  246 (426)
T ss_dssp             EEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEET-----TCSEEEEEETTTTEEEEEEE
T ss_pred             EEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeee-----cccceeeeecccccEEEEec
Confidence            4433 3345555554321       246677889999999999988742     24667788888887766553


No 38 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.71  E-value=1.5e-15  Score=132.78  Aligned_cols=148  Identities=15%  Similarity=0.133  Sum_probs=112.7

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCCCceeeecceeecccc
Q 017421          137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGTMESLANVTEIHDG  215 (372)
Q Consensus       137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  215 (372)
                      ++|++++.|++|.|||+.+++.+.... ...+...+.+++|+|||++++ +++.++.|.+||+.+++...........  
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~-~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~--   78 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE--   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT--
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEE-CCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc--
Confidence            579999999999999999987665532 333444578999999999875 5667999999999999875444322110  


Q ss_pred             cceeccCCCCccccEEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCC
Q 017421          216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGS------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH  283 (372)
Q Consensus       216 ~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~  283 (372)
                               .+...+..++|+|++++++++.            .+..+.+||..+++....+.. ...+..++|+ ++|+
T Consensus        79 ---------~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~  147 (337)
T d1pbyb_          79 ---------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDGS  147 (337)
T ss_dssp             ---------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTSS
T ss_pred             ---------ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEc-CCCC
Confidence                     1223456789999999988765            457899999999998888774 4568899999 9999


Q ss_pred             EEEEEeCCCeEEEEecc
Q 017421          284 LIYSGSDDNLCKVNSVL  300 (372)
Q Consensus       284 ~l~s~~~dg~i~vwd~~  300 (372)
                      ++++++.+  +.+||..
T Consensus       148 ~l~~~~~~--~~~~d~~  162 (337)
T d1pbyb_         148 KLYGLGRD--LHVMDPE  162 (337)
T ss_dssp             CEEEESSS--EEEEETT
T ss_pred             EEEEEcCC--cceeeee
Confidence            99988654  6677764


No 39 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.69  E-value=1.5e-14  Score=124.42  Aligned_cols=206  Identities=14%  Similarity=0.114  Sum_probs=146.5

Q ss_pred             EEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEE-EEeCCCeEEEEECCCCceeeecceeecccccc
Q 017421          139 FVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGTMESLANVTEIHDGLD  217 (372)
Q Consensus       139 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  217 (372)
                      +++++.|++|.|||+.+++.+.....    ...+..++|+|||++|+ ++..++.|.+||+.+++............++.
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~----g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~   80 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA   80 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEEC----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccc
Confidence            35677889999999999976654322    22478999999999875 56678999999999988755443322222233


Q ss_pred             eeccCC-------------------------CCccccEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEeecCCCC
Q 017421          218 FSAADD-------------------------GGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSD  271 (372)
Q Consensus       218 ~~~~~~-------------------------~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~  271 (372)
                      +.++..                         -.+...+.++.|+|+++.++ ++..++.+.+|+..+......+.. ...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  159 (301)
T d1l0qa2          81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-GRS  159 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-CSS
T ss_pred             cccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc-CCC
Confidence            332211                         01344667899999998775 555678899999999988887764 456


Q ss_pred             eEEEEEeCCCCCEEEEEeCC-CeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421          272 VNTVCFGDESGHLIYSGSDD-NLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR  345 (372)
Q Consensus       272 v~~~~~sp~~~~~l~s~~~d-g~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~  345 (372)
                      +..+.++ +++..+++++.+ +.+.+|+.....     .....+..++|++++..++++..+   -.++.|++||..+++
T Consensus       160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~v~v~D~~t~~  235 (301)
T d1l0qa2         160 PKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD---KYFNTVSMIDTGTNK  235 (301)
T ss_dssp             EEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEEC---SSCCEEEEEETTTTE
T ss_pred             ceEEEee-ccccceeeecccccccccccccceeeeecccccCCcceeecccccccccccccc---ceeeeeeeeecCCCe
Confidence            7899999 888877777655 667777765322     344567889999999988766311   135679999999998


Q ss_pred             EEEEEeee
Q 017421          346 TFYSFMVH  353 (372)
Q Consensus       346 ~~~~~~~h  353 (372)
                      .+..+..+
T Consensus       236 ~~~~~~~~  243 (301)
T d1l0qa2         236 ITARIPVG  243 (301)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEcCC
Confidence            88776543


No 40 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.68  E-value=7.4e-15  Score=128.42  Aligned_cols=232  Identities=11%  Similarity=0.004  Sum_probs=158.2

Q ss_pred             cCCceeEeeeeeCCCCCccc--cCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE
Q 017421          101 AADCCHMLSRYLPVNGPWPV--DQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL  177 (372)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  177 (372)
                      +.+..+.+|++........+  ..|.+.+..++|+|||++|++++ .|+.|.+|++..............+...+..++|
T Consensus        11 ~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~   90 (333)
T d1ri6a_          11 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIST   90 (333)
T ss_dssp             GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEE
T ss_pred             CCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEE
Confidence            45667888888765544433  37889999999999999986554 5899999999865433333223334445788999


Q ss_pred             CCCCCEEEEEeC-CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEE
Q 017421          178 SPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYD  255 (372)
Q Consensus       178 ~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd  255 (372)
                      +|||++|++++. ++.|.+|+.............              .+...+.++.++|+++++++++. +..|.+|+
T Consensus        91 spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~  156 (333)
T d1ri6a_          91 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV--------------EGLDGCHSANISPDNRTLWVPALKQDRICLFT  156 (333)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--------------CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             cCCCCEEeecccCCCceeeeccccccceeccccc--------------CCCccceEEEeeecceeeeccccccceeeEEE
Confidence            999999998875 678999998776543332221              13346778899999998887765 46799999


Q ss_pred             CCCCeEEEE------eecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccccc----------------CCCCCeeEE
Q 017421          256 LEANKLSLR------ILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLLT----------------RSINPCNKY  312 (372)
Q Consensus       256 ~~~~~~~~~------~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~----------------~~~~~v~~~  312 (372)
                      .........      .......+..++|+ +++..++... ..+...+|+.....                ........+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~g~~p~~i~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (333)
T d1ri6a_         157 VSDDGHLVAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI  235 (333)
T ss_dssp             ECTTSCEEEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred             eccCCcceeeeceeeeeecCCCccEEEEe-ccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeE
Confidence            876532221      12344567889999 7877776554 56678888764111                233456778


Q ss_pred             EeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421          313 LFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYSFMV  352 (372)
Q Consensus       313 ~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~  352 (372)
                      +++++++++++...     .++.+.+|++...........
T Consensus       236 ~~s~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  270 (333)
T d1ri6a_         236 HITPDGRHLYACDR-----TASLITVFSVSEDGSVLSKEG  270 (333)
T ss_dssp             EECTTSSEEEEEET-----TTTEEEEEEECTTSCCEEEEE
T ss_pred             EEecccCceeeecc-----cCCeEEEEEEcCCCCEEEEEE
Confidence            99999998876631     356777777766554444433


No 41 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.67  E-value=1.4e-14  Score=129.12  Aligned_cols=223  Identities=8%  Similarity=-0.101  Sum_probs=144.9

Q ss_pred             cCCCCceEEEEECCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC------
Q 017421          121 DQTTSRAYVSQFSADGSLFVAG-----FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM------  189 (372)
Q Consensus       121 ~~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------  189 (372)
                      ..+..++..++++|||+.+++.     +..+.|.+||..+++.+....   .+.  ...+.|+|||++|++++.      
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~---~~~--~~~~a~SpDG~~l~va~~~~~~~~   91 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN---GGF--LPNPVAAHSGSEFALASTSFSRIA   91 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEe---CCC--CccEEEcCCCCEEEEEeecCCccc
Confidence            3567889999999999998764     234679999999997766522   222  337999999999998753      


Q ss_pred             ----CCeEEEEECCCCceeeecceeec--------ccccceeccCC-----------------------CCccccEEEEE
Q 017421          190 ----SPIVHIVDVGSGTMESLANVTEI--------HDGLDFSAADD-----------------------GGYSFGIFSLK  234 (372)
Q Consensus       190 ----dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----------------------~~h~~~i~~~~  234 (372)
                          ++.|.+||..+++..........        ..++.+.++..                       ..+.....++.
T Consensus        92 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (373)
T d2madh_          92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYH  171 (373)
T ss_pred             ccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEE
Confidence                57899999999886544322111        11223333221                       11234456788


Q ss_pred             EcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecC--------------------------C------------------
Q 017421          235 FSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAH--------------------------T------------------  269 (372)
Q Consensus       235 ~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~--------------------------~------------------  269 (372)
                      ++|+++.+ ++.+.|+.+.+|+...+........+                          .                  
T Consensus       172 ~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  251 (373)
T d2madh_         172 IHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAP  251 (373)
T ss_pred             EecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEe
Confidence            99998655 67788999999998765443321100                          0                  


Q ss_pred             ---------------CCeEEEEEeCCCCCEE----------EEEeCCCeEEEEeccccc-----CCCCCeeEEEeccCCC
Q 017421          270 ---------------SDVNTVCFGDESGHLI----------YSGSDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNK  319 (372)
Q Consensus       270 ---------------~~v~~~~~sp~~~~~l----------~s~~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~  319 (372)
                                     .....++++ +++..+          ++...++.+.+||+.+.+     .+...+..++|+|||+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~  330 (373)
T d2madh_         252 IDALSGGRKADTWRPGGWQQVAYL-KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGG  330 (373)
T ss_pred             eccccCcEEeeeeccCcceeeEEe-cCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCC
Confidence                           011123344 333333          334455677888876443     4556789999999998


Q ss_pred             eEEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421          320 YLIIYLILVISIYSPNILLDNYFLLRTFYSFMVH  353 (372)
Q Consensus       320 ~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h  353 (372)
                      .++..+    .--|+.|++||+.+++.+.++..|
T Consensus       331 ~~l~vt----~~~d~~v~v~D~~tg~~~~~~~~~  360 (373)
T d2madh_         331 PDLYAL----SAGTEVLHIYDAGAGDQDQSTVEL  360 (373)
T ss_pred             EEEEEE----eCCCCeEEEEECCCCCEEEEECCC
Confidence            643221    114889999999999999988765


No 42 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.64  E-value=4.1e-15  Score=131.45  Aligned_cols=221  Identities=15%  Similarity=0.096  Sum_probs=147.6

Q ss_pred             eEEEEECCCCCEEEEE----------eCCCcEEEEeCCCCeEEEEeeecccCC----cceEEEEECCCCCEEEEEeC--C
Q 017421          127 AYVSQFSADGSLFVAG----------FQASQIRIYDVERGWKIQKDILAKSLR----WTVTDTSLSPDQRHLVYASM--S  190 (372)
Q Consensus       127 v~~~~~s~~~~~l~~~----------~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~--d  190 (372)
                      +..++|||||++|++.          ..++.|.+||+.+++.+........+.    .....+.|+|++++++.+..  +
T Consensus        49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~  128 (355)
T d2bbkh_          49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA  128 (355)
T ss_dssp             SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred             CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCC
Confidence            3478999999988764          347899999999987766543322221    23456899999999887754  5


Q ss_pred             CeEEEEECCCCceeeecceeec--------ccccceeccC---------------------CCCccccEEEEEEcCCCCE
Q 017421          191 PIVHIVDVGSGTMESLANVTEI--------HDGLDFSAAD---------------------DGGYSFGIFSLKFSTDGRE  241 (372)
Q Consensus       191 g~i~vwd~~~~~~~~~~~~~~~--------~~~~~~~~~~---------------------~~~h~~~i~~~~~sp~~~~  241 (372)
                      ..+.+|+..+++..........        ...+.+.++.                     ...+...+....+.+++..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (355)
T d2bbkh_         129 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR  208 (355)
T ss_dssp             CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred             ceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCe
Confidence            6899999998876543322110        0001111111                     0123334555677888888


Q ss_pred             EEEEeCCCeEEEEECCCCeEEE--EeecC----------CCCeEEEEEeCCCCCEEEEEeCC----------CeEEEEec
Q 017421          242 LVAGSSDDCIYVYDLEANKLSL--RILAH----------TSDVNTVCFGDESGHLIYSGSDD----------NLCKVNSV  299 (372)
Q Consensus       242 l~s~s~dg~i~iwd~~~~~~~~--~~~~~----------~~~v~~~~~sp~~~~~l~s~~~d----------g~i~vwd~  299 (372)
                      ++.++.++.+++|++..+....  ....+          ......++++ +++..++....+          ..|.+||+
T Consensus       209 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~  287 (355)
T d2bbkh_         209 LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH-RALDRIYLLVDQRDEWRHKTASRFVVVLDA  287 (355)
T ss_dssp             EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE-TTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             EEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEe-CCCCeEEEEeccCCceeecCCCCeEEEEeC
Confidence            9999999999999998775321  11111          1233458888 888887766543          36999998


Q ss_pred             cccc-----CCCCCeeEEEeccCCCe-EEEEeeeeEEEeeceEEEeecccceEEEEEeee
Q 017421          300 LLLT-----RSINPCNKYLFNPCNKY-LIIYLILVISIYSPNILLDNYFLLRTFYSFMVH  353 (372)
Q Consensus       300 ~~~~-----~~~~~v~~~~~s~~g~~-l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~h  353 (372)
                      .+.+     .....+.+++|+|||+. ++++.     -.|++|.+||..+++.++++.++
T Consensus       288 ~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~-----~~d~~i~v~D~~tg~~~~~i~~~  342 (355)
T d2bbkh_         288 KTGERLAKFEMGHEIDSINVSQDEKPLLYALS-----TGDKTLYIHDAESGEELRSVNQL  342 (355)
T ss_dssp             TTCCEEEEEEEEEEECEEEECCSSSCEEEEEE-----TTTTEEEEEETTTCCEEEEECCC
T ss_pred             CCCcEEEEecCCCCEEEEEEcCCCCeEEEEEE-----CCCCEEEEEECCCCCEEEEEeCc
Confidence            7543     23456789999999984 33331     15899999999999999888654


No 43 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.63  E-value=1.1e-14  Score=127.66  Aligned_cols=201  Identities=13%  Similarity=0.021  Sum_probs=135.9

Q ss_pred             ccCCceeEeeeeeCCCCCcccc-CCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEeeeccc---CCcceEE
Q 017421          100 SAADCCHMLSRYLPVNGPWPVD-QTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKS---LRWTVTD  174 (372)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~v~~  174 (372)
                      .+.+..+.+|+....+....+. .+...+.+++|+|||+++ +++..++.|.+||+.+++.+........   +...+..
T Consensus        14 ~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~   93 (346)
T d1jmxb_          14 TNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYS   93 (346)
T ss_dssp             EETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSC
T ss_pred             EcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEE
Confidence            4455677788776655444444 456678899999999987 5556789999999999977655432221   1224668


Q ss_pred             EEECCCCCEEEEEe------------CCCeEEEEECCCCceeeecceee-------------------------------
Q 017421          175 TSLSPDQRHLVYAS------------MSPIVHIVDVGSGTMESLANVTE-------------------------------  211 (372)
Q Consensus       175 ~~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~-------------------------------  211 (372)
                      ++|+|||+++++++            .++.+.+|+..+++.........                               
T Consensus        94 v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (346)
T d1jmxb_          94 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTG  173 (346)
T ss_dssp             EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTC
T ss_pred             EEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCC
Confidence            99999999987764            35667778766544321110000                               


Q ss_pred             ----------cccccceeccCC----------------------------------------------------CCcccc
Q 017421          212 ----------IHDGLDFSAADD----------------------------------------------------GGYSFG  229 (372)
Q Consensus       212 ----------~~~~~~~~~~~~----------------------------------------------------~~h~~~  229 (372)
                                ......+.+...                                                    ..|...
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (346)
T d1jmxb_         174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTEL  253 (346)
T ss_dssp             CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred             CEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccce
Confidence                      000011111100                                                    023445


Q ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc
Q 017421          230 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT  303 (372)
Q Consensus       230 i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~  303 (372)
                      +..+.+++++.+++... ++.|.+||..+++.+..+. +...+.+++|+ |||++|++++.|+.|++||+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s-~DG~~l~v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         254 YFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFD-KKGDKLYLGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             EEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEEC-SSSSCEEEESBSSEEEEEETTTTE
T ss_pred             eEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECccCC
Confidence            56677788777776665 4679999999999888776 45679999999 999999999999999999998653


No 44 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.54  E-value=3.4e-13  Score=117.59  Aligned_cols=172  Identities=12%  Similarity=0.095  Sum_probs=122.6

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC-CCeEEEEECCCCceeeecceeeccccc
Q 017421          138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGL  216 (372)
Q Consensus       138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~  216 (372)
                      .+++++.|++|+||++.....+.. .....+...+..++|+|||++|++++. |+.|.+|++..............    
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~-~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~----   80 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTL-TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA----   80 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEE-EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE----
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEE-EEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc----
Confidence            356778999999999976533322 122345567999999999999966554 89999999986653222211111    


Q ss_pred             ceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeEEEE--eecCCCCeEEEEEeCCCCCEEEEEe-CCC
Q 017421          217 DFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLR--ILAHTSDVNTVCFGDESGHLIYSGS-DDN  292 (372)
Q Consensus       217 ~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~sp~~~~~l~s~~-~dg  292 (372)
                               +...+..++|+|||++|++++. ++.|.+|+.........  ...+...+.++.++ ++++++++++ .+.
T Consensus        81 ---------~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s-~d~~~~~~~~~~~~  150 (333)
T d1ri6a_          81 ---------LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANIS-PDNRTLWVPALKQD  150 (333)
T ss_dssp             ---------CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEEC-TTSSEEEEEEGGGT
T ss_pred             ---------cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEee-ecceeeeccccccc
Confidence                     1235678999999999988875 67899999877654333  33566788899999 9999888776 456


Q ss_pred             eEEEEeccccc------------CCCCCeeEEEeccCCCeEEEE
Q 017421          293 LCKVNSVLLLT------------RSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       293 ~i~vwd~~~~~------------~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      .|.+|+.....            ........++|++++.+++..
T Consensus       151 ~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~  194 (333)
T d1ri6a_         151 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV  194 (333)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred             eeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEee
Confidence            79999875211            234456889999999988766


No 45 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.43  E-value=1.3e-11  Score=108.51  Aligned_cols=209  Identities=10%  Similarity=-0.019  Sum_probs=136.5

Q ss_pred             EEECCCCCEEEEEe-----CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------CCCeEE
Q 017421          130 SQFSADGSLFVAGF-----QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVH  194 (372)
Q Consensus       130 ~~~s~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~  194 (372)
                      .+.+||++.+++..     .+..|.+||..+++.+....   .+  ....++|+|||++|++++          .++.|.
T Consensus         7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~---~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMID---GG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEE---EC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             EeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEE---CC--CCCceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            35689999987653     35579999999997766532   22  234799999999888653          478999


Q ss_pred             EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCC---
Q 017421          195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHT---  269 (372)
Q Consensus       195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~---  269 (372)
                      +||+.+++.............         ........++|+|++++++.++  .+..+.+|+..+++.+..+..+.   
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRF---------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH  152 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCC---------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE
T ss_pred             EEECCCCCEEEEEecCCccee---------ecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcce
Confidence            999999887554432211110         0112334578999999887764  45679999999887655433211   


Q ss_pred             ------------------------------------------CCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc----
Q 017421          270 ------------------------------------------SDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT----  303 (372)
Q Consensus       270 ------------------------------------------~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~----  303 (372)
                                                                ..+....+. +++..++.++.++.+.+|++....    
T Consensus       153 ~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~  231 (355)
T d2bbkh_         153 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS-QKAGRLVWPTYTGKIHQIDLSSGDAKFL  231 (355)
T ss_dssp             EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE-TTTTEEEEEBTTSEEEEEECTTSSCEEC
T ss_pred             EeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeecccc-CCCCeEEEecCCCeEEEEecCCCcEEEE
Confidence                                                      112233455 556677777889999999876321    


Q ss_pred             ----C----------CCCCeeEEEeccCCCeEEEEeeee-E---EEeeceEEEeecccceEEEEEeee
Q 017421          304 ----R----------SINPCNKYLFNPCNKYLIIYLILV-I---SIYSPNILLDNYFLLRTFYSFMVH  353 (372)
Q Consensus       304 ----~----------~~~~v~~~~~s~~g~~l~~~~~~~-~---~~~d~~i~lw~~~~~~~~~~~~~h  353 (372)
                          .          .......+++++++..++...... .   ......+.+||..+++.+..+..+
T Consensus       232 ~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~  299 (355)
T d2bbkh_         232 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG  299 (355)
T ss_dssp             CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred             eccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC
Confidence                0          112335688999998887653211 0   011357899999999988776543


No 46 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.41  E-value=4.3e-12  Score=112.78  Aligned_cols=216  Identities=10%  Similarity=-0.029  Sum_probs=133.8

Q ss_pred             EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeeccc----CCcceEEEEECCCCCEEEEEe-CCCeE
Q 017421          129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKS----LRWTVTDTSLSPDQRHLVYAS-MSPIV  193 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~-~dg~i  193 (372)
                      .++|+|||+.|++.+          .|+.|.+||..+++.+........    .......++|+|||++++++. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            589999999888754          367899999999877665432211    111244689999999998876 47899


Q ss_pred             EEEECCCCceeeecceeecc--------cccceeccC---------------------CCCccccEEEEEEcCCCCEEEE
Q 017421          194 HIVDVGSGTMESLANVTEIH--------DGLDFSAAD---------------------DGGYSFGIFSLKFSTDGRELVA  244 (372)
Q Consensus       194 ~vwd~~~~~~~~~~~~~~~~--------~~~~~~~~~---------------------~~~h~~~i~~~~~sp~~~~l~s  244 (372)
                      .+||+.+++...........        ..+.++++.                     ...+...+..+.+.+++..+.+
T Consensus       149 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (368)
T d1mdah_         149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA  228 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC
T ss_pred             EEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEe
Confidence            99999998765443221110        000111100                     0112233345566666654443


Q ss_pred             EeCCCeEEEEECCCCeEEEEee--cC----------CCCeEEEEEeCCCCCEEEEEeCC---------CeEEEEeccccc
Q 017421          245 GSSDDCIYVYDLEANKLSLRIL--AH----------TSDVNTVCFGDESGHLIYSGSDD---------NLCKVNSVLLLT  303 (372)
Q Consensus       245 ~s~dg~i~iwd~~~~~~~~~~~--~~----------~~~v~~~~~sp~~~~~l~s~~~d---------g~i~vwd~~~~~  303 (372)
                        ..+.+.++++..+.......  .+          ......++++ +++..++....+         ..|.+||..+.+
T Consensus       229 --~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~-~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~  305 (368)
T d1mdah_         229 --VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL-KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ  305 (368)
T ss_dssp             --BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE-TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC
T ss_pred             --cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEc-CCCCEEEEEecCCCceeecCCceEEEEECCCCc
Confidence              34556677766554332211  11          1123457888 777766554322         358899987554


Q ss_pred             -----CCCCCeeEEEeccCCCe-EEEEeeeeEEEeeceEEEeecccceEEEEEee
Q 017421          304 -----RSINPCNKYLFNPCNKY-LIIYLILVISIYSPNILLDNYFLLRTFYSFMV  352 (372)
Q Consensus       304 -----~~~~~v~~~~~s~~g~~-l~~~~~~~~~~~d~~i~lw~~~~~~~~~~~~~  352 (372)
                           .....+.+++|+|||+. ++++.     ..|+.|.+||..+++.+.++..
T Consensus       306 ~~~~~~~~~~~~~~a~spDG~~~ly~s~-----~~~~~v~v~D~~tgk~~~~i~~  355 (368)
T d1mdah_         306 TSGPISNGHDSDAIIAAQDGASDNYANS-----AGTEVLDIYDAASDQDQSSVEL  355 (368)
T ss_dssp             EEECCEEEEEECEEEECCSSSCEEEEEE-----TTTTEEEEEESSSCEEEEECCC
T ss_pred             EeEEecCCCceeEEEECCCCCEEEEEEe-----CCCCeEEEEECCCCCEEEEEEC
Confidence                 23356788999999974 44332     1478999999999999988754


No 47 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.36  E-value=1.1e-10  Score=103.26  Aligned_cols=186  Identities=10%  Similarity=0.013  Sum_probs=114.5

Q ss_pred             EEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeeecc--------------------------------
Q 017421          129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAK--------------------------------  166 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~--------------------------------  166 (372)
                      .++|+|||++|+++.          .++.|.|||+.+++.+.......                                
T Consensus        70 ~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  149 (373)
T d2madh_          70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCc
Confidence            689999999998864          35789999999875443211000                                


Q ss_pred             ------------cCCcceEEEEECCCCCEE-EEEeCCCeEEEEECCCCceeeecceeecc--------------cc-cce
Q 017421          167 ------------SLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGTMESLANVTEIH--------------DG-LDF  218 (372)
Q Consensus       167 ------------~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--------------~~-~~~  218 (372)
                                  .+...+.++.++|+++.+ ++.+.|+.+.+|+...+............              .+ ..+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (373)
T d2madh_         150 VGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVW  229 (373)
T ss_pred             eEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEE
Confidence                        001123456677877654 56777899999998776654322110000              00 000


Q ss_pred             eccCC------------------CCc----------cccEEEEEEcCCCCEEE----------EEeCCCeEEEEECCCCe
Q 017421          219 SAADD------------------GGY----------SFGIFSLKFSTDGRELV----------AGSSDDCIYVYDLEANK  260 (372)
Q Consensus       219 ~~~~~------------------~~h----------~~~i~~~~~sp~~~~l~----------s~s~dg~i~iwd~~~~~  260 (372)
                      .....                  ..+          ......++++|++..++          +...++.+.+||..+++
T Consensus       230 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~  309 (373)
T d2madh_         230 PVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ  309 (373)
T ss_pred             ecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCc
Confidence            00000                  000          11223456666665443          44556789999999999


Q ss_pred             EEEEeecCCCCeEEEEEeCCCCCE--EEEEeCCCeEEEEeccccc------CCCCCeeEEEecc
Q 017421          261 LSLRILAHTSDVNTVCFGDESGHL--IYSGSDDNLCKVNSVLLLT------RSINPCNKYLFNP  316 (372)
Q Consensus       261 ~~~~~~~~~~~v~~~~~sp~~~~~--l~s~~~dg~i~vwd~~~~~------~~~~~v~~~~~s~  316 (372)
                      .+..+. +...+.+++|+ |||+.  +++++.|+.|++||+.+.+      .+....+.+++.+
T Consensus       310 ~~~~~~-~~~~~~~~a~s-pDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~  371 (373)
T d2madh_         310 TSSQIS-LGHDVDAISVA-QDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMN  371 (373)
T ss_pred             EEEEec-CCCCeeEEEEC-CCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEec
Confidence            888775 66788999999 89884  4678899999999998543      3444455555433


No 48 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.34  E-value=7.3e-11  Score=108.21  Aligned_cols=98  Identities=13%  Similarity=0.080  Sum_probs=73.5

Q ss_pred             CceeEeeeeeCCCCC-----ccccCCCCceEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEeeecccC
Q 017421          103 DCCHMLSRYLPVNGP-----WPVDQTTSRAYVSQFSADGSLFVAGFQ---------ASQIRIYDVERGWKIQKDILAKSL  168 (372)
Q Consensus       103 ~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~~~  168 (372)
                      +..+.+++.......     ..+..|...|.++.|||||++|+.++.         ++.+.|||+.++...    ....+
T Consensus        35 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~----~l~~~  110 (470)
T d2bgra1          35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI----TEERI  110 (470)
T ss_dssp             SSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC----CSSCC
T ss_pred             CCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccc----ccccC
Confidence            344556665555432     345566788999999999999998743         567899999988432    25566


Q ss_pred             CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee
Q 017421          169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES  205 (372)
Q Consensus       169 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  205 (372)
                      ...+..+.|+|||+.||... ++.+++|+..++....
T Consensus       111 ~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1         111 PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             CccccccccccCcceeeEee-cccceEEECCCCceee
Confidence            77899999999999999864 6789999988776543


No 49 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.32  E-value=4.6e-11  Score=109.56  Aligned_cols=142  Identities=14%  Similarity=0.116  Sum_probs=106.0

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEe--eecccCCcceEEEEECCCCCEEEEEeC---------CCeEEEEE
Q 017421          129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD--ILAKSLRWTVTDTSLSPDQRHLVYASM---------SPIVHIVD  197 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~vwd  197 (372)
                      .+.|.+++.++..  .++.+.+||+.+++.....  ..+..+...|.++.|+||+++|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4679999987653  5788999999998654321  123445567999999999999998753         46789999


Q ss_pred             CCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecC---------
Q 017421          198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH---------  268 (372)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---------  268 (372)
                      +.+++...+.                 .+...+..+.|||||+.||... ++.+.+|+..+++..+....+         
T Consensus        99 ~~~~~~~~l~-----------------~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~  160 (470)
T d2bgra1          99 LNKRQLITEE-----------------RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGI  160 (470)
T ss_dssp             TTTTEECCSS-----------------CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred             CCCCcccccc-----------------cCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccc
Confidence            9998754333                 2445789999999999999865 678999999988765443211         


Q ss_pred             ---------CCCeEEEEEeCCCCCEEEEEeCC
Q 017421          269 ---------TSDVNTVCFGDESGHLIYSGSDD  291 (372)
Q Consensus       269 ---------~~~v~~~~~sp~~~~~l~s~~~d  291 (372)
                               .+....+.|| |||+.|+....|
T Consensus       161 ~d~~~~~~~~~~~~~~~wS-PDGk~ia~~~~d  191 (470)
T d2bgra1         161 TDWVYEEEVFSAYSALWWS-PNGTFLAYAQFN  191 (470)
T ss_dssp             CCHHHHHHTSSSSBCEEEC-TTSSEEEEEEEE
T ss_pred             cceeeeeeecCCccccEEC-CCCCccceeEec
Confidence                     2234568899 999999987654


No 50 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.13  E-value=3e-09  Score=94.89  Aligned_cols=195  Identities=8%  Similarity=-0.026  Sum_probs=125.3

Q ss_pred             cCCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCE--EEEEeCCC------
Q 017421          121 DQTTSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRH--LVYASMSP------  191 (372)
Q Consensus       121 ~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~dg------  191 (372)
                      ..|.........+|||++|++. ..+..|.++|+.+.+.......  .+...+..+.|+|+++.  ++..+.+.      
T Consensus        68 d~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~i--P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~d  145 (441)
T d1qnia2          68 DCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHI--PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPND  145 (441)
T ss_dssp             CBCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEEC--TTCCCEEEEEECCSSBCCEEEEEECSCEESSCS
T ss_pred             cccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEec--CCCCCccceEEeccCCEEEEEeccCCcccccCc
Confidence            3455566667778999998655 5678999999999866554322  23346899999999985  44444332      


Q ss_pred             -----------eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC------------
Q 017421          192 -----------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------------  248 (372)
Q Consensus       192 -----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d------------  248 (372)
                                 .+..+|..+.+........                 .....+.|+|+|+++++++.+            
T Consensus       146 g~~~~~~~~~~~~~~iD~~t~~v~~qI~v~-----------------~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~  208 (441)
T d1qnia2         146 GTDFSLDNSYTMFTAIDAETMDVAWQVIVD-----------------GNLDNTDADYTGKYATSTCYNSERAVDLAGTMR  208 (441)
T ss_dssp             SSCCCGGGEEEEEEEEETTTCSEEEEEEES-----------------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTC
T ss_pred             ccccccccccceEEeecCccceeeEEEecC-----------------CCccceEECCCCCEEEEEecCCCceEEEeccCc
Confidence                       2344666665543322211                 135567788888877766533            


Q ss_pred             -----------------------------CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEE-EEeCCCeEEEEe
Q 017421          249 -----------------------------DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIY-SGSDDNLCKVNS  298 (372)
Q Consensus       249 -----------------------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~-s~~~dg~i~vwd  298 (372)
                                                   +.+.+++......+..+.... ....+.++ |||++++ ++..+++|.|||
T Consensus       209 ~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgk-sPhGv~vS-PDGkyl~~~~~~~~tvsv~d  286 (441)
T d1qnia2         209 NDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPK-NPHGLNTS-PDGKYFIANGKLSPTVSVIA  286 (441)
T ss_dssp             SSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBS-SCCCEEEC-TTSCEEEEECTTSSBEEEEE
T ss_pred             ceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCC-CccCceEC-CCCCEEEEeCCcCCcEEEEE
Confidence                                         344455555555566666544 35789999 9999775 456899999999


Q ss_pred             ccccc----CC-------------CCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421          299 VLLLT----RS-------------INPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYF  342 (372)
Q Consensus       299 ~~~~~----~~-------------~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~  342 (372)
                      +.++.    ..             .-.....+|+++|..+.+..      .|.+|..|++.
T Consensus       287 ~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~------~ds~v~kw~~~  341 (441)
T d1qnia2         287 IDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLF------IDSQVCKWNIA  341 (441)
T ss_dssp             GGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEET------TTTEEEEEEHH
T ss_pred             eehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEccc------ccceEEEeccc
Confidence            97533    11             11223457888886655543      57888999874


No 51 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.08  E-value=4.1e-09  Score=94.03  Aligned_cols=184  Identities=12%  Similarity=0.072  Sum_probs=123.1

Q ss_pred             EEEEeCCCcEEEEeCCCCeEEEEeeeccc---------------------------CCcceEEEEECCCCCEEEEEe-CC
Q 017421          139 FVAGFQASQIRIYDVERGWKIQKDILAKS---------------------------LRWTVTDTSLSPDQRHLVYAS-MS  190 (372)
Q Consensus       139 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------------------------~~~~v~~~~~~~~~~~l~~~~-~d  190 (372)
                      +++++.+|+|.||++.+++.+...-.+..                           |.-........|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            56788999999999999877665422210                           111233444578999987665 57


Q ss_pred             CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC--EEEEEeCCC-----------------eE
Q 017421          191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR--ELVAGSSDD-----------------CI  251 (372)
Q Consensus       191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~--~l~s~s~dg-----------------~i  251 (372)
                      ++|.++|+.+++........               +...+..++|+|+|+  +++..+.+.                 .+
T Consensus        94 ~rVavIDl~t~k~~~ii~iP---------------~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~  158 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIP---------------NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMF  158 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECT---------------TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecC---------------CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceE
Confidence            89999999999876554432               223788999999998  444444332                 24


Q ss_pred             EEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC---------------eEEEEe------------------
Q 017421          252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN---------------LCKVNS------------------  298 (372)
Q Consensus       252 ~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg---------------~i~vwd------------------  298 (372)
                      ..+|..+.+...++... ..+..+.++ |+|+++++.+.+.               .|.+.+                  
T Consensus       159 ~~iD~~t~~v~~qI~v~-~~p~~v~~s-pdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~  236 (441)
T d1qnia2         159 TAIDAETMDVAWQVIVD-GNLDNTDAD-YTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD  236 (441)
T ss_dssp             EEEETTTCSEEEEEEES-SCCCCEEEC-SSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred             EeecCccceeeEEEecC-CCccceEEC-CCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCC
Confidence            56888888777776643 457889999 9999998887542               122222                  


Q ss_pred             --------ccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421          299 --------VLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL  344 (372)
Q Consensus       299 --------~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~  344 (372)
                              .....     ........+.++|||++++++.     -.++++.+||+...
T Consensus       237 ~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~-----~~~~tvsv~d~~k~  290 (441)
T d1qnia2         237 SKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANG-----KLSPTVSVIAIDKL  290 (441)
T ss_dssp             CCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEEC-----TTSSBEEEEEGGGH
T ss_pred             CCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeC-----CcCCcEEEEEeehh
Confidence                    11100     1223457899999999998773     15788888887653


No 52 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.07  E-value=4e-07  Score=75.92  Aligned_cols=210  Identities=15%  Similarity=0.085  Sum_probs=129.5

Q ss_pred             CCCCCccccCCCCceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC
Q 017421          113 PVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM  189 (372)
Q Consensus       113 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  189 (372)
                      ....+..+..+...+...+|||||+.||......   .+.+.+...+....    ...+........|+|+++.++....
T Consensus        27 dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~spdg~~i~~~~~  102 (269)
T d2hqsa1          27 DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----VASFPRHNGAPAFSPDGSKLAFALS  102 (269)
T ss_dssp             TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----EECCSSCEEEEEECTTSSEEEEEEC
T ss_pred             CCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE----EeeeecccccceecCCCCeeeEeee
Confidence            4555666666778889999999999998765433   47777777664332    2234446788999999999887654


Q ss_pred             -CCe--EEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCC--eEEEEECCCCeEEE
Q 017421          190 -SPI--VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDD--CIYVYDLEANKLSL  263 (372)
Q Consensus       190 -dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg--~i~iwd~~~~~~~~  263 (372)
                       ++.  +..+............                 .........+++++..++..+ .++  .|.+.++..+.. .
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~  164 (269)
T d2hqsa1         103 KTGSLNLYVMDLASGQIRQVTD-----------------GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-Q  164 (269)
T ss_dssp             TTSSCEEEEEETTTCCEEECCC-----------------CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-E
T ss_pred             cCCccceeecccccccceeeee-----------------ccccccccccccccccceecccccCCceEeeeecccccc-e
Confidence             333  2233322222111111                 112344566777777665443 344  467777776644 3


Q ss_pred             EeecCCCCeEEEEEeCCCCCEEEEEeC-CCeEEEEec--cc----ccCCCCCeeEEEeccCCCeEEEEeeeeEEEeeceE
Q 017421          264 RILAHTSDVNTVCFGDESGHLIYSGSD-DNLCKVNSV--LL----LTRSINPCNKYLFNPCNKYLIIYLILVISIYSPNI  336 (372)
Q Consensus       264 ~~~~~~~~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~--~~----~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i  336 (372)
                      .+..+........|+ |+++.++..+. .+...+|..  ..    ............|+|||+.|+..+...   -...|
T Consensus       165 ~~~~~~~~~~~~~~s-pdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~---~~~~l  240 (269)
T d2hqsa1         165 RITWEGSQNQDADVS-SDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG---MGSVL  240 (269)
T ss_dssp             ECCCSSSEEEEEEEC-TTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET---TEEEE
T ss_pred             eeecccccccccccc-cccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCC---CCcEE
Confidence            344456677788999 88888877654 444444443  31    223445667889999999988653211   13467


Q ss_pred             EEeecccceEEE
Q 017421          337 LLDNYFLLRTFY  348 (372)
Q Consensus       337 ~lw~~~~~~~~~  348 (372)
                      .++++..+...+
T Consensus       241 ~~~~~dg~~~~~  252 (269)
T d2hqsa1         241 NLVSTDGRFKAR  252 (269)
T ss_dssp             EEEETTSCCEEE
T ss_pred             EEEECCCCCEEE
Confidence            888887765443


No 53 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.05  E-value=1.6e-08  Score=86.72  Aligned_cols=225  Identities=10%  Similarity=0.055  Sum_probs=145.1

Q ss_pred             cCCCCccccCC-ceeEeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcc
Q 017421           93 YSGRGRFSAAD-CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWT  171 (372)
Q Consensus        93 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  171 (372)
                      +.+++.+...+ ....++++.+......+......+.+++|++||+++++...++.+.+++...................
T Consensus        35 v~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (302)
T d2p4oa1          35 SAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIF  114 (302)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSC
T ss_pred             ECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccc
Confidence            34555553222 24456677776666666777889999999999999999888888888876543222222222223345


Q ss_pred             eEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeE
Q 017421          172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI  251 (372)
Q Consensus       172 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i  251 (372)
                      +..+.+.++++++++.+.++.+..++...+..............      ...........+.++. +.++++.+..+.|
T Consensus       115 ~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i  187 (302)
T d2p4oa1         115 LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS------NSESVFPAANGLKRFG-NFLYVSNTEKMLL  187 (302)
T ss_dssp             EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS------STTCCSCSEEEEEEET-TEEEEEETTTTEE
T ss_pred             cceeEEccCCCEEeeccccccceeeeccCCcceeEecCCcccee------eccCcccccccccccC-CceeeecCCCCeE
Confidence            78999999999988888899999999887653221111000000      0001223456677654 3455666778889


Q ss_pred             EEEECCCCeEEE--EeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc-------ccCCCCCeeEEEe---ccCCC
Q 017421          252 YVYDLEANKLSL--RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL-------LTRSINPCNKYLF---NPCNK  319 (372)
Q Consensus       252 ~iwd~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~v~~~~~---s~~g~  319 (372)
                      ..+++.......  ...........+++. ++|+++++...++.|..++..-       .......+++++|   ++|++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~pdgia~d-~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~  266 (302)
T d2p4oa1         188 LRIPVDSTDKPGEPEIFVEQTNIDDFAFD-VEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCT  266 (302)
T ss_dssp             EEEEBCTTSCBCCCEEEEESCCCSSEEEB-TTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred             EeccccccccccccccccCCCCCcceEEC-CCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCC
Confidence            999886543211  111233456789999 9999888888899999998651       1223356789999   77888


Q ss_pred             eEEEEe
Q 017421          320 YLIIYL  325 (372)
Q Consensus       320 ~l~~~~  325 (372)
                      .|++++
T Consensus       267 ~Lyvtt  272 (302)
T d2p4oa1         267 AIYVVT  272 (302)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            887664


No 54 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.02  E-value=8.9e-08  Score=81.90  Aligned_cols=188  Identities=11%  Similarity=0.036  Sum_probs=126.4

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee
Q 017421          126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES  205 (372)
Q Consensus       126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  205 (372)
                      .+..++++|||+++++...+++|..|+.......     .......+.+++|+++|+++++...++.+..|+........
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~-----~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~  103 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI-----HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  103 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE-----EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEE-----EEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce
Confidence            4778999999999999998999988886654222     12333468999999999999998888888888865433211


Q ss_pred             ecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec----------CCCCeEEE
Q 017421          206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA----------HTSDVNTV  275 (372)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----------~~~~v~~~  275 (372)
                      .. ....            ......+.+++.++++++++.+.++.+..+|...+........          .......+
T Consensus       104 ~~-~~~~------------~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi  170 (302)
T d2p4oa1         104 ET-LLTL------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL  170 (302)
T ss_dssp             EE-EEEC------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred             ee-cccc------------CCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccc
Confidence            11 1110            1123678899999999999888899999999887764332221          11234566


Q ss_pred             EEeCCCCCEEEEEeCCCeEEEEeccccc--------CCCCCeeEEEeccCCCeEEEEe-eeeEEEee
Q 017421          276 CFGDESGHLIYSGSDDNLCKVNSVLLLT--------RSINPCNKYLFNPCNKYLIIYL-ILVISIYS  333 (372)
Q Consensus       276 ~~sp~~~~~l~s~~~dg~i~vwd~~~~~--------~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~d  333 (372)
                      .+.  .+.++++.+..+.|..++.....        ........++|+++|++.++.. ++.+..++
T Consensus       171 ~~~--~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~  235 (302)
T d2p4oa1         171 KRF--GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA  235 (302)
T ss_dssp             EEE--TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred             ccc--CCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence            665  34556666778888888875221        1234457899999998666542 33344443


No 55 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.01  E-value=2.8e-09  Score=94.08  Aligned_cols=183  Identities=8%  Similarity=-0.085  Sum_probs=115.8

Q ss_pred             CCceEEEEECCCCCEEEE---EeCCC--cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe----------
Q 017421          124 TSRAYVSQFSADGSLFVA---GFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------  188 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~---~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------  188 (372)
                      .+....++..++++....   ...++  .|.+||..+++.+....   .+.  ...++|+|||+.|++++          
T Consensus        19 ~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~---~~~--~~~~a~spDg~~i~~~~~~~~~~~~g~   93 (368)
T d1mdah_          19 DGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL---GAF--LSLAVAGHSGSDFALASTSFARSAKGK   93 (368)
T ss_dssp             CCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE---ECT--TCEEEECTTSSCEEEEEEEETTTTSSS
T ss_pred             CCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEe---CCC--CCcceECCCCCEEEEEcccCccccccc
Confidence            444555567788875422   23344  47777998887666432   222  23589999999998765          


Q ss_pred             CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEeec
Q 017421          189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILA  267 (372)
Q Consensus       189 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~  267 (372)
                      .++.|.+||..+++............   +.      .......++|+|||++|+++. .++.+.+||+.+++....+..
T Consensus        94 ~d~~v~v~D~~t~~~~~~i~~p~~~~---~~------~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~  164 (368)
T d1mdah_          94 RTDYVEVFDPVTFLPIADIELPDAPR---FS------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKS  164 (368)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTSCS---CC------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEEC
T ss_pred             cCCeEEEEECCCCcEeeeecCCccce---ec------ccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeec
Confidence            36779999999988654433221100   00      011233589999999988775 578999999999998888876


Q ss_pred             CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------------ccCCCCCeeEEEeccCCCeEEEE
Q 017421          268 HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------------LTRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       268 ~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------------~~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      +....    +.|.....++..+.||.+.+|++..            ...+...+..+.+.+++..+...
T Consensus       165 ~~~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (368)
T d1mdah_         165 ASCFH----IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV  229 (368)
T ss_dssp             SSCCC----CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred             cCcce----EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec
Confidence            54432    1113344566666777777776541            12344455677788887766544


No 56 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.92  E-value=2.8e-07  Score=81.01  Aligned_cols=158  Identities=10%  Similarity=-0.010  Sum_probs=101.8

Q ss_pred             ceEEEEECCCCCEEEEEeC-CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe-CC
Q 017421          171 TVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD  248 (372)
Q Consensus       171 ~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s-~d  248 (372)
                      -+.++.|+|||++++++.. ...|.+|+................           ........++|+|+++++.+.. .+
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~-----------~~g~gPr~i~f~pdg~~~yv~~e~~  214 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP-----------DPGDHPRWVAMHPTGNYLYALMEAG  214 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS-----------STTCCEEEEEECTTSSEEEEEETTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeec-----------CCCCceEEEEECCCCceEEEeccCC
Confidence            3789999999998888765 457888876544322111111100           1224688999999999886554 57


Q ss_pred             CeEEEEECCCCeE--EEE---ee--------------cCCCCeEEEEEeCCCCCEEEEEeC------CCeEEEEeccccc
Q 017421          249 DCIYVYDLEANKL--SLR---IL--------------AHTSDVNTVCFGDESGHLIYSGSD------DNLCKVNSVLLLT  303 (372)
Q Consensus       249 g~i~iwd~~~~~~--~~~---~~--------------~~~~~v~~~~~sp~~~~~l~s~~~------dg~i~vwd~~~~~  303 (372)
                      ++|.+|++..+..  ...   ..              .+......+.++ |+|++|+++..      .+.|..|++....
T Consensus       215 ~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s-pdG~~lyvsnr~~~~~~~~~i~~~~~~~~g  293 (365)
T d1jofa_         215 NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALT-FSGKYMFASSRANKFELQGYIAGFKLRDCG  293 (365)
T ss_dssp             TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC-TTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred             CEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEEC-CCCCEEEEEcccCCCccceEEEEEEecCCC
Confidence            8999999876532  111   11              011234578999 99999887742      2237677654211


Q ss_pred             ------------CCCCCeeEEEecc-CCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421          304 ------------RSINPCNKYLFNP-CNKYLIIYLILVISIYSPNILLDNYFLLR  345 (372)
Q Consensus       304 ------------~~~~~v~~~~~s~-~g~~l~~~~~~~~~~~d~~i~lw~~~~~~  345 (372)
                                  ........++++| +|++|+++..     .++.|.+|++....
T Consensus       294 ~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~-----~s~~v~v~~~~~~~  343 (365)
T d1jofa_         294 SIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD-----QEGWLEIYRWKDEF  343 (365)
T ss_dssp             CEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS-----SSCEEEEEEEETTE
T ss_pred             ceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeC-----CCCeEEEEEEeCCc
Confidence                        2234567899998 8999988842     36888888775543


No 57 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.92  E-value=1.9e-07  Score=82.08  Aligned_cols=177  Identities=9%  Similarity=-0.010  Sum_probs=109.3

Q ss_pred             CCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCeEEE--EeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECC
Q 017421          124 TSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQ--KDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVG  199 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~  199 (372)
                      ...+.++.|+|||+++++++. ...|.+|+......+.  ..............+.|+|+++++.+.. .++.|.+|++.
T Consensus       144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            345789999999998887754 3478888765432221  1112222334688999999999886665 48899999998


Q ss_pred             CCceeeecceeecc---cccceeccCCCCccccEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEE------
Q 017421          200 SGTMESLANVTEIH---DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLR------  264 (372)
Q Consensus       200 ~~~~~~~~~~~~~~---~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~------  264 (372)
                      .+............   .+..-.......+......+.++|||++|+++..      .+.|..|++.....+..      
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~  303 (365)
T d1jofa_         224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP  303 (365)
T ss_dssp             TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE
T ss_pred             CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE
Confidence            76543222211110   0000000111123445678999999999877642      23477788764322111      


Q ss_pred             eecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEecc
Q 017421          265 ILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVL  300 (372)
Q Consensus       265 ~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~  300 (372)
                      .........+++++|.+|++|+++. .++.|.+|+++
T Consensus       304 ~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~  340 (365)
T d1jofa_         304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK  340 (365)
T ss_dssp             CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred             EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEe
Confidence            1123445678999954899887775 67899999875


No 58 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.91  E-value=4.8e-07  Score=76.28  Aligned_cols=111  Identities=10%  Similarity=0.076  Sum_probs=81.6

Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee--cCCCCeEEEEEeCCCCCEEEEEeC-CCeEEEEecc--
Q 017421          226 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSD-DNLCKVNSVL--  300 (372)
Q Consensus       226 h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~-dg~i~vwd~~--  300 (372)
                      +......+++.++++.+++....+.|++||.. ++.+.++.  +.......|++. ++|+++++-.. ++.|.+|+..  
T Consensus       155 ~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD-~~G~i~Vad~~~~~~v~~f~~~G~  232 (279)
T d1q7fa_         155 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGIN-SNGEILIADNHNNFNLTIFTQDGQ  232 (279)
T ss_dssp             TCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEEC-TTCCEEEEECSSSCEEEEECTTSC
T ss_pred             cccccceeeeccceeEEeeeccccceeeeecC-CceeeeecccccccCCcccccc-cCCeEEEEECCCCcEEEEECCCCC
Confidence            34567889999999988888888999999975 55666663  344567899999 89997776543 4579998864  


Q ss_pred             ---ccc--CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccce
Q 017421          301 ---LLT--RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLR  345 (372)
Q Consensus       301 ---~~~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~  345 (372)
                         ++.  ........+++.|+|+++++.       ++..|++|.+....
T Consensus       233 ~~~~~~~~~~~~~p~~vav~~dG~l~V~~-------~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         233 LISALESKVKHAQCFDVALMDDGSVVLAS-------KDYRLYIYRYVQLA  275 (279)
T ss_dssp             EEEEEEESSCCSCEEEEEEETTTEEEEEE-------TTTEEEEEECSCCC
T ss_pred             EEEEEeCCCCCCCEeEEEEeCCCcEEEEe-------CCCeEEEEEeeeec
Confidence               111  223357899999999866554       67889999887654


No 59 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.90  E-value=2.5e-07  Score=77.17  Aligned_cols=179  Identities=10%  Similarity=0.020  Sum_probs=121.8

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME  204 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  204 (372)
                      ....+++++++++++++....+.+++++..+...+..   . .....+.++++.++++++++-.....+..++.......
T Consensus        57 ~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~---~-~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~  132 (260)
T d1rwia_          57 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP---F-DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT  132 (260)
T ss_dssp             CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC---C-CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE
T ss_pred             cCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeee---e-eeeeecccccccccceeEeeccccccccccccccceee
Confidence            3467889999999888777766777666554433221   1 22235789999999998877666677777776554321


Q ss_pred             eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCE
Q 017421          205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL  284 (372)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~  284 (372)
                      .... .               .......++++|+++++++...++.|..+|...................+++. ++|++
T Consensus       133 ~~~~-~---------------~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d-~~g~l  195 (260)
T d1rwia_         133 VLPF-T---------------GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVD-EAGTV  195 (260)
T ss_dssp             ECCC-C---------------SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEEC-TTCCE
T ss_pred             eeee-c---------------ccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceee-eeeee
Confidence            1110 0               11245678999999988888888999999987654433323455677899998 88998


Q ss_pred             EEEEeCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEE
Q 017421          285 IYSGSDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       285 l~s~~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      +++....+.|..++....      ...-.....++++++|.++++-
T Consensus       196 ~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad  241 (260)
T d1rwia_         196 YVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVAD  241 (260)
T ss_dssp             EEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEE
T ss_pred             eeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEE
Confidence            888878888888876521      1222456899999998765543


No 60 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.83  E-value=5.3e-07  Score=75.15  Aligned_cols=180  Identities=9%  Similarity=-0.005  Sum_probs=116.6

Q ss_pred             CCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421          124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT  202 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  202 (372)
                      .....+++++++|+.+++. +..+.+..++.........  ...+ ......++++++++.+++....+.+++++-.+..
T Consensus        13 ~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~--~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~   89 (260)
T d1rwia_          13 RLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--PFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ   89 (260)
T ss_dssp             CCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEEC--CCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred             cCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEe--ccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccce
Confidence            3456899999999977665 4456777776654422221  1122 2246789999999877776666666665544433


Q ss_pred             eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCC
Q 017421          203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG  282 (372)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~  282 (372)
                      ..  ...               ........+++.++++++++-..+..+..++...................++++ +++
T Consensus        90 ~~--~~~---------------~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g  151 (260)
T d1rwia_          90 TV--LPF---------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD-NSG  151 (260)
T ss_dssp             EE--CCC---------------CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEEC-TTC
T ss_pred             ee--eee---------------eeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeec-CCC
Confidence            21  110               011357889999999988877777778888776544322222223456789998 889


Q ss_pred             CEEEEEeCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEE
Q 017421          283 HLIYSGSDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       283 ~~l~s~~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      +++++...++.|..+|....      .........+++.++|+++++.
T Consensus       152 ~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd  199 (260)
T d1rwia_         152 NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE  199 (260)
T ss_dssp             CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred             CEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeee
Confidence            98888888889999997621      1334556889999999876665


No 61 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.76  E-value=5.3e-06  Score=71.10  Aligned_cols=199  Identities=10%  Similarity=0.033  Sum_probs=123.0

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC----CCeEEEEECCC
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM----SPIVHIVDVGS  200 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~  200 (372)
                      ..+.+++|.++|+++++-...+.|..|+...+......   .........+++++||+++++...    .+.+...+..+
T Consensus        40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~---~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~  116 (319)
T d2dg1a1          40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  116 (319)
T ss_dssp             CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEE---eCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence            34568999999998888778899999998776443332   223335789999999998877543    23455555555


Q ss_pred             CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEeecCCCCeEE
Q 017421          201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRILAHTSDVNT  274 (372)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~v~~  274 (372)
                      ..........              .-....+.+++.|+|++.++...      .+.+..++..... +..+...-...+.
T Consensus       117 ~~~~~~~~~~--------------~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~~~~pnG  181 (319)
T d2dg1a1         117 DNLQDIIEDL--------------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANG  181 (319)
T ss_dssp             CSCEEEECSS--------------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEE
T ss_pred             ceeeeeccCC--------------CcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEeeccceeee
Confidence            4432221100              01125788999999997766432      1335555554333 2333323345678


Q ss_pred             EEEeCCCCCEEEEE-eCCCeEEEEeccccc--------------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEe
Q 017421          275 VCFGDESGHLIYSG-SDDNLCKVNSVLLLT--------------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLD  339 (372)
Q Consensus       275 ~~~sp~~~~~l~s~-~~dg~i~vwd~~~~~--------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw  339 (372)
                      ++|+ ++++.|+.+ +..+.|..||+..-.              ........+++.++|++.++..      ..+.|.++
T Consensus       182 ia~s-~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~------~~g~V~~~  254 (319)
T d2dg1a1         182 IALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY------GQGRVLVF  254 (319)
T ss_dssp             EEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE------TTTEEEEE
T ss_pred             eeec-cccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEc------CCCEEEEE
Confidence            9999 888866544 567899999875210              1112356799999998666542      24566666


Q ss_pred             ecccceEEEE
Q 017421          340 NYFLLRTFYS  349 (372)
Q Consensus       340 ~~~~~~~~~~  349 (372)
                      +- .|+.+..
T Consensus       255 ~p-~G~~l~~  263 (319)
T d2dg1a1         255 NK-RGYPIGQ  263 (319)
T ss_dssp             CT-TSCEEEE
T ss_pred             CC-CCcEEEE
Confidence            63 4555443


No 62 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74  E-value=1.6e-07  Score=85.36  Aligned_cols=200  Identities=11%  Similarity=0.028  Sum_probs=123.0

Q ss_pred             EECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC---------CCeEEEEECCCC
Q 017421          131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---------SPIVHIVDVGSG  201 (372)
Q Consensus       131 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~vwd~~~~  201 (372)
                      .|.+++.++.. ..+|.|.+|++.++..........-....+....|+||+++++....         .+.+.++|+.++
T Consensus        23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             EEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            47777775543 55688999999877442211111112235778899999999887643         578899999988


Q ss_pred             ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cCCCC---------
Q 017421          202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSD---------  271 (372)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~---------  271 (372)
                      ....+.....              ....+....|||||+.||... ++.|.+.+...+..++... +....         
T Consensus       102 ~~~~l~~~~~--------------~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~v  166 (465)
T d1xfda1         102 DPQSLDPPEV--------------SNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL  166 (465)
T ss_dssp             CCEECCCTTC--------------CSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred             ceeeccCccC--------------CccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchh
Confidence            7654432111              112455678999999998876 6788888887776544432 22111         


Q ss_pred             --------eEEEEEeCCCCCEEEEEeCC-Ce---------------------------------EEEEeccccc------
Q 017421          272 --------VNTVCFGDESGHLIYSGSDD-NL---------------------------------CKVNSVLLLT------  303 (372)
Q Consensus       272 --------v~~~~~sp~~~~~l~s~~~d-g~---------------------------------i~vwd~~~~~------  303 (372)
                              -.++.|| |||+.||....| ..                                 +.++|+....      
T Consensus       167 yeee~~~~~~a~~WS-PDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~  245 (465)
T d1xfda1         167 YEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM  245 (465)
T ss_dssp             HHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred             hhhhhccccceEEEC-CCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEe
Confidence                    2467899 999999876532 22                                 3334432111      


Q ss_pred             ------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421          304 ------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS  349 (372)
Q Consensus       304 ------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~  349 (372)
                            ....-+..+.|+|++++++......=.  ...+.++|..+++....
T Consensus       246 ~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~--~~~i~~~d~~tg~~~~~  295 (465)
T d1xfda1         246 PPDDPRMREYYITMVKWATSTKVAVTWLNRAQN--VSILTLCDATTGVCTKK  295 (465)
T ss_dssp             CCCCGGGSSEEEEEEEESSSSEEEEEEEETTSC--EEEEEEEETTTCCEEEE
T ss_pred             ccCcCccccceeeeeEEcCCCeEEEEEEccccc--cceEEEEcCCCCcEEEE
Confidence                  111135678999999876665321111  13466778887765443


No 63 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.71  E-value=3.2e-06  Score=72.34  Aligned_cols=180  Identities=11%  Similarity=0.058  Sum_probs=114.0

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCC-cceEEEEECCCCCEEEEEeC---------------
Q 017421          126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR-WTVTDTSLSPDQRHLVYASM---------------  189 (372)
Q Consensus       126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---------------  189 (372)
                      ....++|.++++.++++.....|..++..............+.. ..+..+.+.++|++.++-..               
T Consensus        72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~  151 (314)
T d1pjxa_          72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK  151 (314)
T ss_dssp             CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred             cceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccC
Confidence            46789999999988888777778889987653322111111111 13578999999988776421               


Q ss_pred             CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC-----EEEEEeCCCeEEEEECCCCeEE--
Q 017421          190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-----ELVAGSSDDCIYVYDLEANKLS--  262 (372)
Q Consensus       190 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~-----~l~s~s~dg~i~iwd~~~~~~~--  262 (372)
                      .|.|..++.. ++......                 .....+.++|+|++.     ++++-+..+.|..||+.....+  
T Consensus       152 ~G~v~~~~~d-g~~~~~~~-----------------~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~  213 (314)
T d1pjxa_         152 FGSIYCFTTD-GQMIQVDT-----------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN  213 (314)
T ss_dssp             CEEEEEECTT-SCEEEEEE-----------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred             CceEEEEeec-CceeEeeC-----------------CcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccce
Confidence            2334444432 22211111                 112457889998764     4455567788999987643221  


Q ss_pred             ----EEeec-CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc------cCCCCCeeEEEeccCCCeEEEE
Q 017421          263 ----LRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL------TRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       263 ----~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~------~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                          ..+.. +......+++. .+|++.++....+.|.+||.+..      ......+++++|.|+++.|.+.
T Consensus       214 ~~~~~~~~~~~~~~pdGiavD-~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt  285 (314)
T d1pjxa_         214 KKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT  285 (314)
T ss_dssp             EEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred             eeEEEEccccccccceeeEEe-cCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEE
Confidence                11221 22345689998 99998888888899999997622      2334678999999999866655


No 64 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.71  E-value=2.6e-06  Score=71.06  Aligned_cols=101  Identities=15%  Similarity=0.182  Sum_probs=67.7

Q ss_pred             EECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC-C-----CeEEEEECCCCc
Q 017421          131 QFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-S-----PIVHIVDVGSGT  202 (372)
Q Consensus       131 ~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~vwd~~~~~  202 (372)
                      ..+||  |+.+|..+. +.|.+.|+.+++.. .   +..+...+....|||||+.|+.... +     ..|.+++..++.
T Consensus         5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g~~~-~---Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~   79 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCC-DDLWEHDLKSGSTR-K---IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE   79 (281)
T ss_dssp             CEEEEEETTEEEEEET-TEEEEEETTTCCEE-E---EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred             ccCCCCCCCEEEEEeC-CcEEEEECCCCCEE-E---EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence            35788  999887654 67999999987543 2   3344456888999999999987643 1     248888888887


Q ss_pred             eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe
Q 017421          203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS  246 (372)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s  246 (372)
                      ...+........          ..........|+|+|+.|+...
T Consensus        80 ~~~lt~~~~~~~----------~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          80 IKRITYFSGKST----------GRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             EEECCCCCEEEE----------TTEECSEEEEECTTCCEEEEEC
T ss_pred             eEEeeecCCCcc----------CccccccccccCCCCCEEEEEE
Confidence            655443221110          1122456788999998887643


No 65 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.66  E-value=8.7e-06  Score=67.43  Aligned_cols=180  Identities=19%  Similarity=0.202  Sum_probs=110.3

Q ss_pred             CCCCCccccCCCCceEEEEECCCCCEEEEEeC-CCc--EEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-
Q 017421          113 PVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQ-ASQ--IRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-  188 (372)
Q Consensus       113 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  188 (372)
                      .......+..+........|+|+|+.++.... ++.  +..+.........    ............+++++..++..+ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  146 (269)
T d2hqsa1          71 ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ----VTDGRSNNTEPTWFPDSQNLAFTSD  146 (269)
T ss_dssp             TTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----CCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred             ccCceeEEeeeecccccceecCCCCeeeEeeecCCccceeeccccccccee----eeeccccccccccccccccceeccc
Confidence            33444566778888999999999999887554 222  3333333332222    222233455667788777665554 


Q ss_pred             CCC--eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeEEE
Q 017421          189 MSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD---CIYVYDLEANKLSL  263 (372)
Q Consensus       189 ~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg---~i~iwd~~~~~~~~  263 (372)
                      .+|  .|.+.++..+.......                 .........|+|+++.++..+.++   .+.+.+...+..  
T Consensus       147 ~~g~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--  207 (269)
T d2hqsa1         147 QAGRPQVYKVNINGGAPQRITW-----------------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--  207 (269)
T ss_dssp             TTSSCEEEEEETTSSCCEECCC-----------------SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--
T ss_pred             ccCCceEeeeecccccceeeec-----------------ccccccccccccccceeEEEeecCCceeeeEeecccccc--
Confidence            344  46666666654332221                 223567788999999988766544   355556555543  


Q ss_pred             EeecCCCCeEEEEEeCCCCCEEEEEeC---CCeEEEEeccc-----ccCCCCCeeEEEecc
Q 017421          264 RILAHTSDVNTVCFGDESGHLIYSGSD---DNLCKVNSVLL-----LTRSINPCNKYLFNP  316 (372)
Q Consensus       264 ~~~~~~~~v~~~~~sp~~~~~l~s~~~---dg~i~vwd~~~-----~~~~~~~v~~~~~s~  316 (372)
                      ....+........|+ |||+.|+..+.   ...|.++++..     +......+..++|+|
T Consensus       208 ~~~~~~~~~~~p~~S-PDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         208 QVLSSTFLDETPSLA-PNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EECCCSSSCEEEEEC-TTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECC
T ss_pred             eEeecCccccceEEC-CCCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCC
Confidence            333455667788999 99998875543   34578888762     234455677788888


No 66 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.61  E-value=3.1e-05  Score=66.13  Aligned_cols=200  Identities=15%  Similarity=0.083  Sum_probs=120.8

Q ss_pred             EeeeeeCCCC--CccccCCCCceEEEEECCCCCEEEEEeC----CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCC
Q 017421          107 MLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQ----ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD  180 (372)
Q Consensus       107 ~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~  180 (372)
                      ++.++.+...  ...+.........+++++||+++++...    .+.+...+......... .........+..+.+.++
T Consensus        62 ~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~nd~~~d~~  140 (319)
T d2dg1a1          62 NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI-IEDLSTAYCIDDMVFDSK  140 (319)
T ss_dssp             EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE-ECSSSSCCCEEEEEECTT
T ss_pred             EEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeee-ccCCCcccCCcceeEEec
Confidence            4444544332  2223445667889999999998877543    23355555544422221 111122235788999999


Q ss_pred             CCEEEEEeC------CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE-EEEeCCCeEEE
Q 017421          181 QRHLVYASM------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYV  253 (372)
Q Consensus       181 ~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l-~s~s~dg~i~i  253 (372)
                      |++.++...      .+.+..++...+.......                 .-...+.++|+|+++.| ++-+..+.|..
T Consensus       141 G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~-----------------~~~~pnGia~s~dg~~lyvad~~~~~I~~  203 (319)
T d2dg1a1         141 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-----------------NISVANGIALSTDEKVLWVTETTANRLHR  203 (319)
T ss_dssp             SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-----------------EESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred             cceeecccccccccCcceeEEEecccceeEEEee-----------------ccceeeeeeeccccceEEEecccCCceEE
Confidence            987665432      2335555554433222211                 01246789999999866 45566789999


Q ss_pred             EECCCC-eEEE-------EeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cc------cCCCCCeeEEEe
Q 017421          254 YDLEAN-KLSL-------RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LL------TRSINPCNKYLF  314 (372)
Q Consensus       254 wd~~~~-~~~~-------~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~------~~~~~~v~~~~~  314 (372)
                      ||+... ....       ...........+++. .+|++.++....+.|.+||..     .+      ..+...+++++|
T Consensus       204 ~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD-~~G~l~Va~~~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~~~~~  282 (319)
T d2dg1a1         204 IALEDDGVTIQPFGATIPYYFTGHEGPDSCCID-SDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQF  282 (319)
T ss_dssp             EEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB-TTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEE
T ss_pred             EEEcCCCceeccccceeeeccCCccceeeeeEc-CCCCEEEEEcCCCEEEEECCCCcEEEEEeCCCcCCCcCceeeeEEE
Confidence            998642 1111       111122345689998 999988888889999999965     11      133446789999


Q ss_pred             ccCCCeEEEEe
Q 017421          315 NPCNKYLIIYL  325 (372)
Q Consensus       315 s~~g~~l~~~~  325 (372)
                      .+++..+++.+
T Consensus       283 ~~~~~~~~~t~  293 (319)
T d2dg1a1         283 IPGTNQLIICS  293 (319)
T ss_dssp             CTTSCEEEEEE
T ss_pred             eCCCCEEEEEc
Confidence            99887776553


No 67 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.55  E-value=5e-05  Score=64.04  Aligned_cols=198  Identities=14%  Similarity=0.046  Sum_probs=126.2

Q ss_pred             EeeeeeCCCCCccccCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecc-cCCcceEEEEECCCCCEEE
Q 017421          107 MLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLV  185 (372)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~  185 (372)
                      .++++.+.............+.++++.++|+++++ +.+ .|.++|..+++...-..... .....+..+.+.|+|++.+
T Consensus        41 ~I~r~d~~~g~~~~~~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~  118 (295)
T d2ghsa1          41 ELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWI  118 (295)
T ss_dssp             EEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred             EEEEEECCCCeEEEEECCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEE
Confidence            44555554444444445677899999999887765 454 58899998875432211111 1223588999999999777


Q ss_pred             EEeC----CCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEEECCCC-
Q 017421          186 YASM----SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEAN-  259 (372)
Q Consensus       186 ~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~~~~-  259 (372)
                      +...    .+.-.+|.+..++......-                 ....+.++|+++++.++ +-+..+.|..|++... 
T Consensus       119 ~~~~~~~~~~~g~l~~~~~g~~~~~~~~-----------------~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~  181 (295)
T d2ghsa1         119 GTMGRKAETGAGSIYHVAKGKVTKLFAD-----------------ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDART  181 (295)
T ss_dssp             EEEETTCCTTCEEEEEEETTEEEEEEEE-----------------ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred             EeccccccccceeEeeecCCcEEEEeec-----------------cCCcceeeecCCCceEEEeecccceeeEeeecccc
Confidence            6532    23445666666654322211                 12467899999998665 5556788999987521 


Q ss_pred             -----e--EEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc-----cccCCCCCeeEEEec-cCCCeEEEE
Q 017421          260 -----K--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL-----LLTRSINPCNKYLFN-PCNKYLIIY  324 (372)
Q Consensus       260 -----~--~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~~v~~~~~s-~~g~~l~~~  324 (372)
                           +  ......+..+....+++. .+|++.++.-..+.|..||..     .+.-....+++++|- |+.+.|++.
T Consensus       182 ~~~~~~~~~~~~~~~~~g~pdG~~vD-~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         182 GLPTGKAEVFIDSTGIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             CCBSSCCEEEEECTTSSSEEEEEEEC-TTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             cccccceEEEeccCcccccccceEEc-CCCCEEeeeeCCCceEEecCCCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence                 1  112223344567889998 899988877778899999975     122233568999995 777766654


No 68 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.55  E-value=2e-05  Score=65.98  Aligned_cols=160  Identities=11%  Similarity=0.129  Sum_probs=114.1

Q ss_pred             CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 017421          123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT  202 (372)
Q Consensus       123 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  202 (372)
                      .......+++.++|+++++....+.+.+++.... .+...- ...+......+++.++++.+++....+.|++||.....
T Consensus       112 ~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~-~~~~~g-~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~  189 (279)
T d1q7fa_         112 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKFG-CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY  189 (279)
T ss_dssp             TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEEE-CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE
T ss_pred             cccccceeccccCCcEEEEeeccceeeEeccCCc-eeeccc-ccccccccceeeeccceeEEeeeccccceeeeecCCce
Confidence            3456788999999998888887788888886543 333322 23344567889999999988888888999999976432


Q ss_pred             eeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeEEEEeecC--CCCeEEEEEeC
Q 017421          203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILAH--TSDVNTVCFGD  279 (372)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~sp  279 (372)
                      . ....  .            .+.......|++.|+|+.+++-.. ++.|.+|+. +++.+.++...  ......|++. 
T Consensus       190 ~-~~~g--~------------~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~-  252 (279)
T d1q7fa_         190 L-RQIG--G------------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM-  252 (279)
T ss_dssp             E-EEES--C------------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE-
T ss_pred             e-eeec--c------------cccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEe-
Confidence            2 1110  0            123346788999999997776543 457999985 57776666432  3467899999 


Q ss_pred             CCCCEEEEEeCCCeEEEEecccc
Q 017421          280 ESGHLIYSGSDDNLCKVNSVLLL  302 (372)
Q Consensus       280 ~~~~~l~s~~~dg~i~vwd~~~~  302 (372)
                      ++|.+++ ++.++.|++|....+
T Consensus       253 ~dG~l~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         253 DDGSVVL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             TTTEEEE-EETTTEEEEEECSCC
T ss_pred             CCCcEEE-EeCCCeEEEEEeeee
Confidence            8887554 568899999998755


No 69 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50  E-value=2.7e-06  Score=76.99  Aligned_cols=192  Identities=11%  Similarity=0.071  Sum_probs=109.7

Q ss_pred             ceEEEEECCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 017421          126 RAYVSQFSADGSLFVAGF---------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV  196 (372)
Q Consensus       126 ~v~~~~~s~~~~~l~~~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw  196 (372)
                      .+....||||+++++...         ..+.+.++|+.++.... +.........+....|||||+.||... ++.|.+.
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~-l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~  139 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS-LDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC  139 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE-CCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceee-ccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence            566778999999988764         35678999998874322 212222333566789999999999875 6789898


Q ss_pred             ECCCCceeeecceeecccccceeccCCCCc----cccEEEEEEcCCCCEEEEEeCC-Ce---------------------
Q 017421          197 DVGSGTMESLANVTEIHDGLDFSAADDGGY----SFGIFSLKFSTDGRELVAGSSD-DC---------------------  250 (372)
Q Consensus       197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~i~~~~~sp~~~~l~s~s~d-g~---------------------  250 (372)
                      +..++....+..  ....+..+.+..+-.+    ...-..+-|||||++||....| ..                     
T Consensus       140 ~~~~~~~~~lt~--~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~  217 (465)
T d1xfda1         140 AHVGKQAIRVVS--TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH  217 (465)
T ss_dssp             SSSSSCCEEEEC--CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred             ecCCCceEEEec--ccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee
Confidence            887776544332  1111212221111000    0112567899999999876422 22                     


Q ss_pred             ------------EEEEECCCCeEEEEee------cCCCCeEEEEEeCCCCCEEEEEe-CC---CeEEEEeccccc-----
Q 017421          251 ------------IYVYDLEANKLSLRIL------AHTSDVNTVCFGDESGHLIYSGS-DD---NLCKVNSVLLLT-----  303 (372)
Q Consensus       251 ------------i~iwd~~~~~~~~~~~------~~~~~v~~~~~sp~~~~~l~s~~-~d---g~i~vwd~~~~~-----  303 (372)
                                  +.++|+.++.......      .....+..+.|+ +++++++... .+   ..|.++|..+..     
T Consensus       218 Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~-~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~  296 (465)
T d1xfda1         218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH  296 (465)
T ss_dssp             CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred             ccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEc-CCCeEEEEEEccccccceEEEEcCCCCcEEEEE
Confidence                        3344444332211111      111235678898 7887666543 22   246677776332     


Q ss_pred             --CCCCCe----eEEEeccCCCeEE
Q 017421          304 --RSINPC----NKYLFNPCNKYLI  322 (372)
Q Consensus       304 --~~~~~v----~~~~~s~~g~~l~  322 (372)
                        ....+|    ....|+|+|+.++
T Consensus       297 ~e~~~~wv~~~~~~p~~~~dg~~~~  321 (465)
T d1xfda1         297 EDESEAWLHRQNEEPVFSKDGRKFF  321 (465)
T ss_dssp             EEECSSCCCCCCCCCEECTTSCSEE
T ss_pred             EEcCCceEeccCCceeEccCCCeeE
Confidence              112222    3468899988543


No 70 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.46  E-value=8.7e-06  Score=69.54  Aligned_cols=159  Identities=14%  Similarity=0.101  Sum_probs=103.0

Q ss_pred             eEEEEECCCCCEEEEEeC---------------CCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCC-----EEEE
Q 017421          127 AYVSQFSADGSLFVAGFQ---------------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR-----HLVY  186 (372)
Q Consensus       127 v~~~~~s~~~~~l~~~~~---------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~  186 (372)
                      .+.+++.++|++.++-..               .|.|..++.+.. .... .   ..-.....++|+|++.     ++++
T Consensus       119 pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~-~~~~-~---~~~~~pNGi~~~~d~d~~~~~lyv~  193 (314)
T d1pjxa_         119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQV-D---TAFQFPNGIAVRHMNDGRPYQLIVA  193 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEE-E---EEESSEEEEEEEECTTSCEEEEEEE
T ss_pred             CcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCc-eeEe-e---CCcceeeeeEECCCCCcceeEEEEE
Confidence            578999999998877432               234544554322 2211 1   1111356889988764     4445


Q ss_pred             EeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 017421          187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL  266 (372)
Q Consensus       187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~  266 (372)
                      -+..+.|..||+................+         ........+++.++|++.++....+.|.+||.+.++....+.
T Consensus       194 d~~~~~i~~~d~~~~g~~~~~~~~~~~~~---------~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~  264 (314)
T d1pjxa_         194 ETPTKKLWSYDIKGPAKIENKKVWGHIPG---------THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR  264 (314)
T ss_dssp             ETTTTEEEEEEEEETTEEEEEEEEEECCC---------CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred             eecccceEEeeccCccccceeeEEEEccc---------cccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEE
Confidence            56688899998764433221111110000         112245679999999988888888999999998887777776


Q ss_pred             cCCCCeEEEEEeCCCCC-EEEEEeCCCeEEEEecc
Q 017421          267 AHTSDVNTVCFGDESGH-LIYSGSDDNLCKVNSVL  300 (372)
Q Consensus       267 ~~~~~v~~~~~sp~~~~-~l~s~~~dg~i~vwd~~  300 (372)
                      .....+++++|. ++++ ++++.+.++.|...++.
T Consensus       265 ~p~~~~t~~afg-~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         265 CPFEKPSNLHFK-PQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             CSSSCEEEEEEC-TTSSEEEEEETTTTEEEEEECS
T ss_pred             CCCCCEEEEEEe-CCCCEEEEEECCCCcEEEEECC
Confidence            666788999998 7886 55666677888888765


No 71 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.34  E-value=0.00021  Score=59.97  Aligned_cols=185  Identities=12%  Similarity=0.078  Sum_probs=118.2

Q ss_pred             EEEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 017421          128 YVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL  206 (372)
Q Consensus       128 ~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~  206 (372)
                      -+..|++.. .++.+--..+.|..||..++.....     .....+.++.+.++++++++ +.+ .+.++|..+++....
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~-----~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l   93 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKTVH-----ALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLH   93 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-----ECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEE
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEEEE-----ECCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEE
Confidence            456788754 4444544678899999988844321     12235788999988876665 444 588999998876443


Q ss_pred             cceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCC
Q 017421          207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG  282 (372)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~  282 (372)
                      ......            .....++.+.+.|+|++.++...+    +.-.+|.+..++....... -.....++|+ +++
T Consensus        94 ~~~~~~------------~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s-~d~  159 (295)
T d2ghsa1          94 AELESD------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFS-PDG  159 (295)
T ss_dssp             ECSSTT------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEEC-TTS
T ss_pred             eeeecC------------CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeec-CCC
Confidence            322111            122468899999999977765432    3456677777765444433 3456789999 777


Q ss_pred             CEEE-EEeCCCeEEEEecccc--------------cCCCCCeeEEEeccCCCeEEEE-eeeeEEEee
Q 017421          283 HLIY-SGSDDNLCKVNSVLLL--------------TRSINPCNKYLFNPCNKYLIIY-LILVISIYS  333 (372)
Q Consensus       283 ~~l~-s~~~dg~i~vwd~~~~--------------~~~~~~v~~~~~s~~g~~l~~~-~~~~~~~~d  333 (372)
                      +.++ +-+..+.|..|++..-              .........+++..+|++.++. ..+.|..||
T Consensus       160 ~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d  226 (295)
T d2ghsa1         160 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD  226 (295)
T ss_dssp             CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred             ceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec
Confidence            7554 5556788998887411              1223456788999999866654 333444445


No 72 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.72  E-value=0.0025  Score=55.09  Aligned_cols=189  Identities=8%  Similarity=-0.052  Sum_probs=113.9

Q ss_pred             EEEECC---CCCEEEEEe-CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC--CCCEEEEEeCC------------
Q 017421          129 VSQFSA---DGSLFVAGF-QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASMS------------  190 (372)
Q Consensus       129 ~~~~s~---~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d------------  190 (372)
                      .+.+..   ||++|++.. .+..|-+.|+.+.+..... .. .....+..+...+  +..+++.++..            
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi-~i-Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~  166 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAIL-EI-PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME  166 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE-EC-SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEE-ec-CCCCCCceeecccCCCeEEEEccCccccccCCCCcccc
Confidence            345543   788887665 5788999999988654422 22 2233467766654  55567766653            


Q ss_pred             ------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC---------------
Q 017421          191 ------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD---------------  249 (372)
Q Consensus       191 ------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg---------------  249 (372)
                            +.+.+.|..+.+........                 .....++++|+|+++++.+.+.               
T Consensus       167 d~~~y~~~~t~ID~~tm~V~~QV~V~-----------------g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D  229 (459)
T d1fwxa2         167 DVANYVNVFTAVDADKWEVAWQVLVS-----------------GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD  229 (459)
T ss_dssp             CGG-EEEEEEEEETTTTEEEEEEEES-----------------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE
T ss_pred             chhhcceEEEEEecCCceEEEEeeeC-----------------CChhccccCCCCCEEEEEeccccCCcchhhcccccce
Confidence                  23567788776654333321                 1345688999999988776431               


Q ss_pred             eEEEE-----------------------ECCCC---eEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEecccc
Q 017421          250 CIYVY-----------------------DLEAN---KLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLL  302 (372)
Q Consensus       250 ~i~iw-----------------------d~~~~---~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~  302 (372)
                      .+.++                       |.++.   ..+..+... .....+.++ |||+++++++ .+.++.|+|++.+
T Consensus       230 ~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVp-KsPHGV~vS-PDGKyi~VaGKLs~tVSViD~~Ki  307 (459)
T d1fwxa2         230 HIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRF  307 (459)
T ss_dssp             EEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEE-SSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGH
T ss_pred             EEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecC-CCCCceEEC-CCCCEEEEeCCcCCcEEEEEehhh
Confidence            13333                       33321   111222211 234678899 9999888766 6899999999743


Q ss_pred             c-----------------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421          303 T-----------------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL  344 (372)
Q Consensus       303 ~-----------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~  344 (372)
                      .                 ...-....-+|+..|. ..++     -.-|.+|.-|++...
T Consensus       308 ~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~-ayts-----lfids~v~kw~~~~~  360 (459)
T d1fwxa2         308 DAVFYENADPRSAVVAEPELGLGPLHTAFDGRGN-AYTS-----LFLDSQVVKWNIEDA  360 (459)
T ss_dssp             HHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSE-EEEE-----ETTTTEEEEEEHHHH
T ss_pred             hhhhcccCCccccEEeecccCcCccccccCCCce-EEEE-----eeccceEEEEecchh
Confidence            2                 1222345567777774 3333     114899999998544


No 73 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.57  E-value=0.0053  Score=52.96  Aligned_cols=182  Identities=14%  Similarity=0.152  Sum_probs=113.9

Q ss_pred             EEEEeCCCcEEEEeCCCCeEEEEeeecccC------------------------------------Ccce--EEEEECC-
Q 017421          139 FVAGFQASQIRIYDVERGWKIQKDILAKSL------------------------------------RWTV--TDTSLSP-  179 (372)
Q Consensus       139 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------------------------------------~~~v--~~~~~~~-  179 (372)
                      |.+|+..|+|+|+-+.+++.+...-.+...                                    .+..  ..+++.. 
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG   95 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   95 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence            557788888888888887665543211100                                    0011  1344443 


Q ss_pred             --CCCEEEEEe-CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEc--CCCCEEEEEeCC------
Q 017421          180 --DQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS--TDGRELVAGSSD------  248 (372)
Q Consensus       180 --~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s--p~~~~l~s~s~d------  248 (372)
                        ||+++++.. .+++|.+-|+++.++..+...+..               ..+..+...  |...|++.++.+      
T Consensus        96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~---------------~~~HG~r~~~~p~T~YV~~~~e~~vP~pn  160 (459)
T d1fwxa2          96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA---------------KGIHGLRPQKWPRSNYVFCNGEDETPLVN  160 (459)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC---------------CSEEEEEECCSSBCSEEEEEECSCEESSC
T ss_pred             ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCC---------------CCCceeecccCCCeEEEEccCccccccCC
Confidence              788887776 478999999999887665544322               144555544  344577666553      


Q ss_pred             ------------CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC---------------eEEEEecc-
Q 017421          249 ------------DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN---------------LCKVNSVL-  300 (372)
Q Consensus       249 ------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg---------------~i~vwd~~-  300 (372)
                                  +.+.++|..+.+....+.- .+....+.++ ++|+++++.+.+.               .+.++++. 
T Consensus       161 dg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s-~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~r  238 (459)
T d1fwxa2         161 DGTNMEDVANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDAD-YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE  238 (459)
T ss_dssp             SSSSTTCGG-EEEEEEEEETTTTEEEEEEEE-SSCCCCEEEC-SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred             CCccccchhhcceEEEEEecCCceEEEEeee-CCChhccccC-CCCCEEEEEeccccCCcchhhcccccceEEEEechHH
Confidence                        2367889998887766653 3456788999 9999998877531               24445542 


Q ss_pred             ----------------------ccc--------CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecc
Q 017421          301 ----------------------LLT--------RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYF  342 (372)
Q Consensus       301 ----------------------~~~--------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~  342 (372)
                                            ...        ........+..+|||++++++..     .++++.+.|+.
T Consensus       239 ie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGK-----Ls~tVSViD~~  305 (459)
T d1fwxa2         239 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK-----LSPTVTVLDVT  305 (459)
T ss_dssp             HHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECT-----TSSBEEEEEGG
T ss_pred             hHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCC-----cCCcEEEEEeh
Confidence                                  100        11234578899999999998841     35666666654


No 74 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.36  E-value=0.00072  Score=55.47  Aligned_cols=87  Identities=15%  Similarity=0.076  Sum_probs=61.5

Q ss_pred             EcCC--CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeC-CC-----eEEEEeccccc---
Q 017421          235 FSTD--GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-DN-----LCKVNSVLLLT---  303 (372)
Q Consensus       235 ~sp~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-dg-----~i~vwd~~~~~---  303 (372)
                      .+||  |+.++..+ ++.|.+.|+..++. ..+..+...+...+|| |||+.||.... ++     .|.+++.....   
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~S-PDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFF-PDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEEC-TTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEEC-CCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            4688  99888765 57799999998876 4566677788999999 99998886532 22     35555554221   


Q ss_pred             ---------CCCCCeeEEEeccCCCeEEEE
Q 017421          304 ---------RSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       304 ---------~~~~~v~~~~~s~~g~~l~~~  324 (372)
                               ........+.|+|+|+.|+..
T Consensus        83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          83 ITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             eeecCCCccCccccccccccCCCCCEEEEE
Confidence                     112345678999999998865


No 75 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=96.83  E-value=0.0078  Score=51.71  Aligned_cols=159  Identities=15%  Similarity=0.106  Sum_probs=93.7

Q ss_pred             eEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-CeEE
Q 017421          127 AYVSQFSADGSLFVAGFQAS-----------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-PIVH  194 (372)
Q Consensus       127 v~~~~~s~~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~  194 (372)
                      +.......+|+.++.|+.+.           .+.+||..++.-.........+........+.++++.++.|+.+ ..+.
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~  101 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  101 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCccee
Confidence            34445566888888887531           37799998874322211222232234567888999999988664 5799


Q ss_pred             EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeEEEEeec-
Q 017421          195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------DCIYVYDLEANKLSLRILA-  267 (372)
Q Consensus       195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~-  267 (372)
                      +||..+.............               .-..++..+||++++.|+.+      ..+.+||..+.+-...-.. 
T Consensus       102 ~yd~~~~~w~~~~~~~~~r---------------~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~  166 (387)
T d1k3ia3         102 LYDSSSDSWIPGPDMQVAR---------------GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK  166 (387)
T ss_dssp             EEEGGGTEEEECCCCSSCC---------------SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC
T ss_pred             EecCccCcccccccccccc---------------cccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCc
Confidence            9999887654332221111               22345667899998888643      3589999988763221100 


Q ss_pred             --------CC----CCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421          268 --------HT----SDVNTVCFGDESGHLIYSGSDDNLCKVNSVL  300 (372)
Q Consensus       268 --------~~----~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~  300 (372)
                              +.    ..-....+..++|+.++.++..+.+.+++..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~  211 (387)
T d1k3ia3         167 VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG  211 (387)
T ss_dssp             SGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred             ccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcc
Confidence                    00    0011122322577777777777766666654


No 76 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.64  E-value=0.12  Score=41.67  Aligned_cols=199  Identities=7%  Similarity=-0.061  Sum_probs=114.6

Q ss_pred             CCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCC
Q 017421          124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSG  201 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~  201 (372)
                      ...+.+++|++..+.|... ..++.|+..++........   .......+.++++..-++.|..+ ...+.|.+.++...
T Consensus        35 ~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v---~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~  111 (263)
T d1npea_          35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI---IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (263)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE---ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEE---EEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence            3457789999877776655 4567788888876533221   11122357889998766666654 45678999998866


Q ss_pred             ceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeEEEEeecCCCCeEEEEEe
Q 017421          202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANKLSLRILAHTSDVNTVCFG  278 (372)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s  278 (372)
                      ....+...                ....+..++++|...++.-...   ...|..-++............-.....+++.
T Consensus       112 ~~~~l~~~----------------~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD  175 (263)
T d1npea_         112 QRRVLFDT----------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD  175 (263)
T ss_dssp             SCEEEECS----------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEE
T ss_pred             eEEEEecc----------------cccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEe
Confidence            54322210                1135788999998777764432   2335555665443333333333567899998


Q ss_pred             CCCCCEEEEE-eCCCeEEEEeccccc-----CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccceEEEE
Q 017421          279 DESGHLIYSG-SDDNLCKVNSVLLLT-----RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLLRTFYS  349 (372)
Q Consensus       279 p~~~~~l~s~-~~dg~i~vwd~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~~~~~~  349 (372)
                       +.++.|+.+ ...+.|...++.-..     .......++++.  +..|..+..     ....|..-|..+++.+..
T Consensus       176 -~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~--~~~lYwtd~-----~~~~I~~~~~~~g~~~~~  244 (263)
T d1npea_         176 -AFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDW-----KTNSVIAMDLAISKEMDT  244 (263)
T ss_dssp             -TTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEET-----TTTEEEEEETTTTEEEEE
T ss_pred             -ecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE--CCEEEEEEC-----CCCEEEEEECCCCccceE
Confidence             556666555 466788888875211     111223455554  334443310     125555556666665533


No 77 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.60  E-value=0.13  Score=41.48  Aligned_cols=171  Identities=10%  Similarity=0.074  Sum_probs=98.2

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEE--EEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeecceeecc
Q 017421          137 SLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIH  213 (372)
Q Consensus       137 ~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~  213 (372)
                      .+|+.+.. +.|+-.+++.....  ........+...+.+++|.+..+.|..+. .++.|+..++..+....+...    
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~----   76 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ----   76 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT----
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEe----
Confidence            34444433 56777777543211  00011112223577899998877777664 467888888876654332210    


Q ss_pred             cccceeccCCCCccccEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCC
Q 017421          214 DGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN  292 (372)
Q Consensus       214 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg  292 (372)
                                  ....+..+++..-+..|. +-...+.|.+.++........+......+..+++.|..|.++.+-...+
T Consensus        77 ------------~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~  144 (263)
T d1npea_          77 ------------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD  144 (263)
T ss_dssp             ------------TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSS
T ss_pred             ------------ccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCC
Confidence                        112578889887666665 4455678999999865543333334467899999944554444433323


Q ss_pred             eEEEE--eccc------ccCCCCCeeEEEeccCCCeEEEE
Q 017421          293 LCKVN--SVLL------LTRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       293 ~i~vw--d~~~------~~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      ..+|+  ++.-      ....-.....+++.+.++.|..+
T Consensus       145 ~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~  184 (263)
T d1npea_         145 NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWV  184 (263)
T ss_dssp             SCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred             CcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEE
Confidence            33444  3321      11223455788888887777655


No 78 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.42  E-value=0.25  Score=42.81  Aligned_cols=107  Identities=16%  Similarity=0.162  Sum_probs=66.7

Q ss_pred             CCCceEEEEECCCCCEEEEE-eCC----CcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCC-------
Q 017421          123 TTSRAYVSQFSADGSLFVAG-FQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------  190 (372)
Q Consensus       123 ~~~~v~~~~~s~~~~~l~~~-~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------  190 (372)
                      +.-.+..+++|||++++|.+ +.+    ..|+++|+.+++.+...+...    ....+.|.+|++.|+....+       
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~----~~~~~~W~~D~~~~~Y~~~~~~~~~~~  198 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV----KFSCMAWTHDGKGMFYNAYPQQDGKSD  198 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE----CSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccc----cccceEEcCCCCEEEEEEeccccCccc
Confidence            33345567899999998854 223    379999999997665433211    13568999999988765433       


Q ss_pred             ---------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEE
Q 017421          191 ---------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG  245 (372)
Q Consensus       191 ---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~  245 (372)
                               ..|..+.+.+............            .....+..+..++++++++..
T Consensus       199 ~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~------------d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFP------------DEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             SSCCCCCCCCEEEEEETTSCGGGCEEEECCT------------TCTTCEEEEEECTTSCEEEEE
T ss_pred             ccccccCCcceEEEEECCCCccccccccccc------------cCCceEEeeeccCCcceeeEE
Confidence                     2577777766543221111110            112246677889999988643


No 79 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.97  E-value=0.29  Score=39.31  Aligned_cols=160  Identities=8%  Similarity=-0.082  Sum_probs=95.9

Q ss_pred             CCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeE--EEEeeecccCCcceEEEEECCCCCEEEEE-eCCCeEEEEEC
Q 017421          123 TTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWK--IQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDV  198 (372)
Q Consensus       123 ~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~  198 (372)
                      ....+.+++|++.++.|.-.. ..+.|.-.++.....  ..... .......+.++++.+.++.|..+ ...+.|.+.++
T Consensus        28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~-~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~  106 (266)
T d1ijqa1          28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (266)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEE-EeCCCCCcceEEEeeccceEEEEecCCCEEEeEec
Confidence            345677899999887776554 456677666653211  11111 11222347788988866666655 44678999999


Q ss_pred             CCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCCCCeEEEE
Q 017421          199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVC  276 (372)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  276 (372)
                      ..........                ........++.+|...+|.-..  ..+.|...++............-..+..++
T Consensus       107 ~g~~~~~~~~----------------~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~  170 (266)
T d1ijqa1         107 KGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT  170 (266)
T ss_dssp             TSSSEEEEEE----------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEE
T ss_pred             CCceEEEEEc----------------CCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEE
Confidence            8665432221                1123578899998665665443  345677777765444333333445678999


Q ss_pred             EeCCCCCEEEEE-eCCCeEEEEecc
Q 017421          277 FGDESGHLIYSG-SDDNLCKVNSVL  300 (372)
Q Consensus       277 ~sp~~~~~l~s~-~~dg~i~vwd~~  300 (372)
                      +. +.++.|+.+ ...+.|...++.
T Consensus       171 iD-~~~~~lYw~d~~~~~I~~~~~d  194 (266)
T d1ijqa1         171 LD-LLSGRLYWVDSKLHSISSIDVN  194 (266)
T ss_dssp             EE-TTTTEEEEEETTTTEEEEEETT
T ss_pred             ee-ccccEEEEecCCcCEEEEEECC
Confidence            99 666666555 456788888875


No 80 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=95.91  E-value=0.38  Score=40.20  Aligned_cols=185  Identities=9%  Similarity=0.019  Sum_probs=100.1

Q ss_pred             eEEEEECCCCCEEEEEeC------------CCcEEEEeCCCCeEEEEeeecccC-----CcceEEEEE--CCCCCE-EEE
Q 017421          127 AYVSQFSADGSLFVAGFQ------------ASQIRIYDVERGWKIQKDILAKSL-----RWTVTDTSL--SPDQRH-LVY  186 (372)
Q Consensus       127 v~~~~~s~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~~~-----~~~v~~~~~--~~~~~~-l~~  186 (372)
                      .-.+...|+|..+++++.            .|.|.++|+.+...........+.     .-....+.+  .++++. |++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            345777888877665532            388999998765332222111111     112344444  445553 444


Q ss_pred             Ee---CCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeC---------------C
Q 017421          187 AS---MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---------------D  248 (372)
Q Consensus       187 ~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~---------------d  248 (372)
                      ..   ...+|.++++........  .......         ......+.+++..++.+++|-..               -
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~--~~~~v~~---------~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~  185 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLL--HLKTIRH---------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL  185 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEE--EEEEECC---------TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTC
T ss_pred             EeccCCCceeEEEEEeCCCCeEE--EEeecCC---------ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcC
Confidence            32   345688887754432111  1111100         12235788888888888887321               1


Q ss_pred             CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeEEEEeccccc--------CCCCCeeEEEecc-CC
Q 017421          249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVNSVLLLT--------RSINPCNKYLFNP-CN  318 (372)
Q Consensus       249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~vwd~~~~~--------~~~~~v~~~~~s~-~g  318 (372)
                      +...+|..+.++..... ..-...+.++++ +++++|+++. ..+.|++|++..-.        .....+-.+.+.+ +|
T Consensus       186 ~~g~v~~~~~~~~~~~~-~~l~~pNGI~~s-~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g  263 (340)
T d1v04a_         186 AWSFVTYYSPNDVRVVA-EGFDFANGINIS-PDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTG  263 (340)
T ss_dssp             CCEEEEEECSSCEEEEE-EEESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTC
T ss_pred             CceeEEEEcCCceEEEc-CCCCccceeEEC-CCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCC
Confidence            23344444444332222 233567899999 8888776654 67889999886211        2234456677765 45


Q ss_pred             CeEEEE
Q 017421          319 KYLIIY  324 (372)
Q Consensus       319 ~~l~~~  324 (372)
                      .+.+++
T Consensus       264 ~lwva~  269 (340)
T d1v04a_         264 DLWVGC  269 (340)
T ss_dssp             CEEEEE
T ss_pred             EEEEEE
Confidence            555554


No 81 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=95.83  E-value=0.19  Score=45.33  Aligned_cols=52  Identities=12%  Similarity=0.203  Sum_probs=35.4

Q ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEEeCCCCC-EEEEEeC
Q 017421          238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGH-LIYSGSD  290 (372)
Q Consensus       238 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~~-~l~s~~~  290 (372)
                      .+.++++|+.||.++.+|.++|+.+.++..... .-.-+.|. .+|+ +|++...
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~-~dGkqyv~v~aG  521 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFE-LAGRQYVAIMAG  521 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEEEEEC
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEE-ECCEEEEEEEeC
Confidence            356788899999999999999999988774221 11124555 5665 5554443


No 82 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=95.47  E-value=0.57  Score=39.06  Aligned_cols=155  Identities=14%  Similarity=0.131  Sum_probs=82.3

Q ss_pred             EEEECCCCCEEEEEe------------CCCeEEEEECCCCceeeecce-e-ecccccceeccCCCCccccEEEEEE--cC
Q 017421          174 DTSLSPDQRHLVYAS------------MSPIVHIVDVGSGTMESLANV-T-EIHDGLDFSAADDGGYSFGIFSLKF--ST  237 (372)
Q Consensus       174 ~~~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~h~~~i~~~~~--sp  237 (372)
                      .+...|+|..+++++            ..|.|.++|+.+......... . .......|.|          ..+..  .+
T Consensus        39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~P----------hGi~l~~~~  108 (340)
T d1v04a_          39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNP----------HGISTFIDD  108 (340)
T ss_dssp             EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCE----------EEEEEEECT
T ss_pred             eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceec----------cceeEEEcC
Confidence            455556655554443            148899999876543222111 1 1111122222          23332  45


Q ss_pred             CCCE-EEEEe---CCCeEEEEECCCCe--EE--EEee-cCCCCeEEEEEeCCCCCEEEEEe-----------------CC
Q 017421          238 DGRE-LVAGS---SDDCIYVYDLEANK--LS--LRIL-AHTSDVNTVCFGDESGHLIYSGS-----------------DD  291 (372)
Q Consensus       238 ~~~~-l~s~s---~dg~i~iwd~~~~~--~~--~~~~-~~~~~v~~~~~sp~~~~~l~s~~-----------------~d  291 (372)
                      +|+. |++..   ...+|.+|++....  ..  .++. ......+.+++. .++.+++|-.                 .-
T Consensus       109 dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~-~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~  187 (340)
T d1v04a_         109 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV-GPEHFYATNDHYFIDPYLKSWEMHLGLAW  187 (340)
T ss_dssp             TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEE-ETTEEEEEESCSCCSHHHHHHHHHTTCCC
T ss_pred             CCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEe-cCCCEEEecCccCcChhhhhhhHhhcCCc
Confidence            6653 33332   35678888875432  21  2222 122457888888 7888888731                 11


Q ss_pred             CeEEEEeccccc---CCCCCeeEEEeccCCCeEEEEeeeeEEEeeceEEEeecccc
Q 017421          292 NLCKVNSVLLLT---RSINPCNKYLFNPCNKYLIIYLILVISIYSPNILLDNYFLL  344 (372)
Q Consensus       292 g~i~vwd~~~~~---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~d~~i~lw~~~~~  344 (372)
                      +.+..||.....   ..-...+.++++||+++|+++.     .....|+.|+....
T Consensus       188 g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~-----t~~~~i~~y~~~~~  238 (340)
T d1v04a_         188 SFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAE-----LLAHKIHVYEKHAN  238 (340)
T ss_dssp             EEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEE-----GGGTEEEEEEECTT
T ss_pred             eeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEe-----CCCCeEEEEEeCCC
Confidence            234444543221   2234568999999999988873     13456666665433


No 83 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=95.45  E-value=0.85  Score=40.99  Aligned_cols=192  Identities=15%  Similarity=0.075  Sum_probs=101.6

Q ss_pred             EEEECCCCCEEEEEeC----------------CCcEEEEeCCCCeEEEEeeecccCC------cceEEEEECCCCC---E
Q 017421          129 VSQFSADGSLFVAGFQ----------------ASQIRIYDVERGWKIQKDILAKSLR------WTVTDTSLSPDQR---H  183 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~~----------------dg~i~vwd~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~---~  183 (372)
                      ..++.++...+..+..                ...+.-.|.++++.........+..      .......+..+++   .
T Consensus       239 ~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~  318 (571)
T d2ad6a1         239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL  318 (571)
T ss_dssp             CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred             ccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccc
Confidence            3466777776665533                2457778888887665433221110      1111222222443   4


Q ss_pred             EEEEeCCCeEEEEECCCCceeeecceeecc-------------------------cccceeccCCCCccccEEEEEEcCC
Q 017421          184 LVYASMSPIVHIVDVGSGTMESLANVTEIH-------------------------DGLDFSAADDGGYSFGIFSLKFSTD  238 (372)
Q Consensus       184 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~h~~~i~~~~~sp~  238 (372)
                      ++.++.+|.+++.|..+++.+.........                         .+....+...+++.-.  ..+++|+
T Consensus       319 v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~--~~a~dP~  396 (571)
T d2ad6a1         319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQG--VDSYDPE  396 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSC--BCEEETT
T ss_pred             eeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccc--cceECCC
Confidence            567788999999999999875322111000                         0001111111222211  2456676


Q ss_pred             CCEEEEEeCC-------------------------------------CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCC
Q 017421          239 GRELVAGSSD-------------------------------------DCIYVYDLEANKLSLRILAHTSDVNTVCFGDES  281 (372)
Q Consensus       239 ~~~l~s~s~d-------------------------------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~  281 (372)
                      ...++....+                                     |.|.-+|+.+++.+.+...- .+..+-..+ ..
T Consensus       397 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~-~~~~~g~l~-Ta  474 (571)
T d2ad6a1         397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY-TK  474 (571)
T ss_dssp             TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE-ET
T ss_pred             CceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCC-CCCCcceeE-ec
Confidence            6655543322                                     46777888888877665422 222211122 34


Q ss_pred             CCEEEEEeCCCeEEEEecccccC-----CCCCe--eEEEeccCCC-eEEEE
Q 017421          282 GHLIYSGSDDNLCKVNSVLLLTR-----SINPC--NKYLFNPCNK-YLIIY  324 (372)
Q Consensus       282 ~~~l~s~~~dg~i~vwd~~~~~~-----~~~~v--~~~~~s~~g~-~l~~~  324 (372)
                      +.++++|+.||.++-+|.++.+.     ....+  .-+.|..||+ |+++.
T Consensus       475 gglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v~  525 (571)
T d2ad6a1         475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM  525 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEEE
Confidence            66888899999999999986541     11111  2255666776 45444


No 84 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=95.40  E-value=0.39  Score=43.28  Aligned_cols=50  Identities=14%  Similarity=0.054  Sum_probs=34.5

Q ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEEeCCCCC-EEEEE
Q 017421          238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGH-LIYSG  288 (372)
Q Consensus       238 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~~-~l~s~  288 (372)
                      .+.++++|+.|+.++.+|.++|+.+.++..... .-.-+.|. .+|+ ++++.
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~-~dGkqYi~v~  525 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYS-FKGKQYIGSM  525 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEE-ECCEEEEEEE
Confidence            356788899999999999999999988763221 11225565 5665 55443


No 85 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=95.37  E-value=0.54  Score=42.37  Aligned_cols=69  Identities=10%  Similarity=0.086  Sum_probs=39.4

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECC--CCCEEEEEeC------CCeEEEEECCCCceeee
Q 017421          137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASM------SPIVHIVDVGSGTMESL  206 (372)
Q Consensus       137 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~------dg~i~vwd~~~~~~~~~  206 (372)
                      ..++.++.|+.+.-.|..+++.+............+. +.-.|  -+..+++++.      .|.|..+|.++|+.+-.
T Consensus       129 ~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~  205 (573)
T d1kb0a2         129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR  205 (573)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             CcEEEEecccceeeeccccccceecccCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceee
Confidence            3567778889898889998877654332211111111 11111  1234444432      46799999999887544


No 86 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=95.21  E-value=0.36  Score=43.56  Aligned_cols=51  Identities=14%  Similarity=0.195  Sum_probs=34.8

Q ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe-EEEEEeCCCCC-EEEEEe
Q 017421          238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV-NTVCFGDESGH-LIYSGS  289 (372)
Q Consensus       238 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~sp~~~~-~l~s~~  289 (372)
                      .+.++++|+.||.++.+|.++|+.+.++....... .-+.|. .+|+ +++..+
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~-~~GkQYv~v~~  539 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYM-VDGRQYVSVAV  539 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEE-ECCEEEEEEEe
Confidence            46788889999999999999999998876422211 114555 5665 444433


No 87 
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=95.14  E-value=0.8  Score=39.77  Aligned_cols=57  Identities=11%  Similarity=0.091  Sum_probs=39.0

Q ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeec-----ccCCcceEEEEECCC
Q 017421          124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-----KSLRWTVTDTSLSPD  180 (372)
Q Consensus       124 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~  180 (372)
                      -...++|+|.||+++|++--..|.|++++..++.........     ...+.....++|+|+
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            356789999999998887655799999988776433221111     122345788999995


No 88 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.85  E-value=1.3  Score=39.80  Aligned_cols=74  Identities=15%  Similarity=0.141  Sum_probs=47.9

Q ss_pred             CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccccc-------CCCCCeeEEEeccCCC-e
Q 017421          249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLT-------RSINPCNKYLFNPCNK-Y  320 (372)
Q Consensus       249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~v~~~~~s~~g~-~  320 (372)
                      |.|.-+|+.+++.+.+...+ .++..-..+ ..+.++++|+.||.++-+|.++.+       .....-.=+.|..+|+ +
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~ls-tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qY  543 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeE-EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence            57888999999888777643 233322233 456788889999999999998654       1111112256677885 5


Q ss_pred             EEEE
Q 017421          321 LIIY  324 (372)
Q Consensus       321 l~~~  324 (372)
                      +++.
T Consensus       544 v~i~  547 (582)
T d1flga_         544 LGVT  547 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5554


No 89 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=94.83  E-value=0.18  Score=42.69  Aligned_cols=115  Identities=13%  Similarity=0.101  Sum_probs=70.8

Q ss_pred             eEEEEECCCCCEEEEEeCCC-----------eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCC
Q 017421          172 VTDTSLSPDQRHLVYASMSP-----------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR  240 (372)
Q Consensus       172 v~~~~~~~~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~  240 (372)
                      +.......+++.++.|+.+.           .+.+||..+++..........             +.......++.++|+
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~-------------~~~~~~~~~~~~~g~   88 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK-------------HDMFCPGISMDGNGQ   88 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS-------------CCCSSCEEEECTTSC
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCC-------------cccceeEEEEecCCc
Confidence            33444555778777777421           367899998875333222111             111233456789999


Q ss_pred             EEEEEeCC-CeEEEEECCCCeEEEEeec-CCCCeEEEEEeCCCCCEEEEEeCC------CeEEEEecc
Q 017421          241 ELVAGSSD-DCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGHLIYSGSDD------NLCKVNSVL  300 (372)
Q Consensus       241 ~l~s~s~d-g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~s~~~d------g~i~vwd~~  300 (372)
                      +++.|+.+ ..+.+||..+..-...-.. ....-.+++.. ++|++++.|+.+      ..+.+||+.
T Consensus        89 i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~-~dG~v~v~GG~~~~~~~~~~v~~yd~~  155 (387)
T d1k3ia3          89 IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPS  155 (387)
T ss_dssp             EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred             EEEeecCCCcceeEecCccCcccccccccccccccceeee-cCCceeeeccccccccccceeeeecCC
Confidence            99988765 5799999988764321111 11222345555 799999988753      358899986


No 90 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.63  E-value=0.88  Score=36.84  Aligned_cols=198  Identities=11%  Similarity=0.095  Sum_probs=114.9

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecc
Q 017421          129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN  208 (372)
Q Consensus       129 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  208 (372)
                      +.-.+|..+.||.-+ ..++.|||+++..++.......    +|.-..|-.+ +.|+..+ +..|+-|+++.... +. +
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e----~VvfWkWis~-~~L~lVT-~taVYHW~~~g~s~-P~-k  137 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQ-PV-K  137 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS----CCCEEEESSS-SEEEEEC-SSEEEEEESSSSCC-CE-E
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC----CcEEEEecCC-CEEEEEc-CCceEEEcccCCCC-ch-h
Confidence            344689898887766 4689999999997776544333    6888888754 4555544 46799999964331 11 1


Q ss_pred             eeecccccceeccCCCCccccEEEEEEcCCCCEEEEEe---C----CCeEEEEECCCCeEEEEeecCCCCeEEEEEe--C
Q 017421          209 VTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS---S----DDCIYVYDLEANKLSLRILAHTSDVNTVCFG--D  279 (372)
Q Consensus       209 ~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s---~----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s--p  279 (372)
                      ..+-+..+         ....|-.-..+++.++++..+   .    .|.+.+|..+.+. .+.+.+|...-..+.+.  +
T Consensus       138 ~fdR~~~L---------~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~  207 (327)
T d1utca2         138 MFDRHSSL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNA  207 (327)
T ss_dssp             EEECCGGG---------TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCS
T ss_pred             hhhhcccc---------cCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEEEEcCCCC
Confidence            11111111         123677777788898876432   2    2568899988664 36677775443333332  0


Q ss_pred             CCCCEEEEEe---CCCeEEEEeccccc----CCCCCeeEEEecc--------------CCCeEEEEeeeeEEEeeceEEE
Q 017421          280 ESGHLIYSGS---DDNLCKVNSVLLLT----RSINPCNKYLFNP--------------CNKYLIIYLILVISIYSPNILL  338 (372)
Q Consensus       280 ~~~~~l~s~~---~dg~i~vwd~~~~~----~~~~~v~~~~~s~--------------~g~~l~~~~~~~~~~~d~~i~l  338 (372)
                      ....+++.+.   ..+++++.++....    ........+-|.|              .-..+..-+      --|-+.+
T Consensus       208 ~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviT------K~G~i~l  281 (327)
T d1utca2         208 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT------KYGYIHL  281 (327)
T ss_dssp             SCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEE------TTSEEEE
T ss_pred             CCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEe------cCcEEEE
Confidence            1112333332   33678888886422    1112223333444              333333222      2377899


Q ss_pred             eecccceEEEEEe
Q 017421          339 DNYFLLRTFYSFM  351 (372)
Q Consensus       339 w~~~~~~~~~~~~  351 (372)
                      +|+.++..++.-.
T Consensus       282 yDleTgt~i~~nR  294 (327)
T d1utca2         282 YDLETGTCIYMNR  294 (327)
T ss_dssp             EETTTCCEEEEEE
T ss_pred             EEcccccEEEEee
Confidence            9999999887553


No 91 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=94.18  E-value=0.39  Score=41.48  Aligned_cols=103  Identities=11%  Similarity=0.107  Sum_probs=64.9

Q ss_pred             CCcceEEEEECCCCCEEEEEeC-C----CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEE
Q 017421          168 LRWTVTDTSLSPDQRHLVYASM-S----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL  242 (372)
Q Consensus       168 ~~~~v~~~~~~~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l  242 (372)
                      +...+..+.++|++++++.+-. .    -.|+++|+.+++...... ..                .....++|.+|++.|
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~----------------~~~~~~~W~~D~~~~  185 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ER----------------VKFSCMAWTHDGKGM  185 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EE----------------ECSCCEEECTTSSEE
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-cc----------------ccccceEEcCCCCEE
Confidence            3334566788999999886532 3    369999999998643221 11                022468899999988


Q ss_pred             EEEeCC----------------CeEEEEECCCCeE--EEEeecC--CCCeEEEEEeCCCCCEEEEE
Q 017421          243 VAGSSD----------------DCIYVYDLEANKL--SLRILAH--TSDVNTVCFGDESGHLIYSG  288 (372)
Q Consensus       243 ~s~s~d----------------g~i~iwd~~~~~~--~~~~~~~--~~~v~~~~~sp~~~~~l~s~  288 (372)
                      +....+                ..|..+.+.+...  ...+...  ...+..+..+ .++++++..
T Consensus       186 ~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s-~d~~~l~i~  250 (430)
T d1qfma1         186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS-DDGRYVLLS  250 (430)
T ss_dssp             EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC-TTSCEEEEE
T ss_pred             EEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeecc-CCcceeeEE
Confidence            654422                2588888877532  2233322  2345667777 888887643


No 92 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=94.15  E-value=1.3  Score=36.87  Aligned_cols=196  Identities=11%  Similarity=0.074  Sum_probs=105.1

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEE------CCCCCEEEEEeC-C---CeEEEEECCCCc-
Q 017421          134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL------SPDQRHLVYASM-S---PIVHIVDVGSGT-  202 (372)
Q Consensus       134 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~-d---g~i~vwd~~~~~-  202 (372)
                      |+..+++.....+-|.+||++ |+.+....  .   +.+..+..      .....-+++++. +   ..|.+|.+.... 
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~---Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~  111 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH--T---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG  111 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECC--S---SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTT
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEecc--c---CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccc
Confidence            345667766777679999996 54554421  1   13443332      222333555553 2   367788775322 


Q ss_pred             eeeecceeecccccceeccCCCCccccEEEEEE--cCC-CC-EEEEEeCCCeEEEEECC---CC----eEEEEeecCCCC
Q 017421          203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STD-GR-ELVAGSSDDCIYVYDLE---AN----KLSLRILAHTSD  271 (372)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--sp~-~~-~l~s~s~dg~i~iwd~~---~~----~~~~~~~~~~~~  271 (372)
                      ...........    ...     -...+..+|+  +|. |. ++++...+|.+..|.+.   .+    +.++.+. -...
T Consensus       112 ~l~~~~~~~~p----~~~-----~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q  181 (353)
T d1h6la_         112 TLQSITDPNRP----IAS-----AIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQ  181 (353)
T ss_dssp             EEEECSCSSSC----EEC-----SSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSC
T ss_pred             ccccccccccc----ccc-----ccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCc
Confidence            11111000000    000     0113556666  664 44 45566678888888763   23    2444554 3457


Q ss_pred             eEEEEEeCCCCCEEEEEeCCCeEEEEeccc-------------ccCCCCCeeEEEecc--CCC-eEEEEeeeeEEEeece
Q 017421          272 VNTVCFGDESGHLIYSGSDDNLCKVNSVLL-------------LTRSINPCNKYLFNP--CNK-YLIIYLILVISIYSPN  335 (372)
Q Consensus       272 v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~-------------~~~~~~~v~~~~~s~--~g~-~l~~~~~~~~~~~d~~  335 (372)
                      +..+.+. +....|+.+-++.-|..++...             .......+..++.-.  ++. +|++++.+     +++
T Consensus       182 ~EGCVvD-de~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG-----~n~  255 (353)
T d1h6la_         182 TEGMAAD-DEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQG-----NSS  255 (353)
T ss_dssp             EEEEEEE-TTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGG-----GTE
T ss_pred             cceEEEe-CCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCC-----CCe
Confidence            8889998 7777888887777665555431             012345667776543  333 66665422     567


Q ss_pred             EEEeecccc-eEEEEEe
Q 017421          336 ILLDNYFLL-RTFYSFM  351 (372)
Q Consensus       336 i~lw~~~~~-~~~~~~~  351 (372)
                      ..++|..+. +-+.+|.
T Consensus       256 f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         256 YAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEEEESSTTCCEEEEEE
T ss_pred             EEEEecCCCccccceEE
Confidence            777777653 4454554


No 93 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=93.97  E-value=1.9  Score=38.57  Aligned_cols=51  Identities=14%  Similarity=0.253  Sum_probs=35.8

Q ss_pred             CCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC-eEEEEEeCCCCC-EEEEE
Q 017421          237 TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD-VNTVCFGDESGH-LIYSG  288 (372)
Q Consensus       237 p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~sp~~~~-~l~s~  288 (372)
                      ..+.++++|+.||.++.+|.++|+.+..+...... -.-+.|. .+|+ +++..
T Consensus       495 tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~-~~G~qYv~i~  547 (582)
T d1flga_         495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWE-QDGEQYLGVT  547 (582)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEEEE
T ss_pred             EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEE-ECCEEEEEEE
Confidence            34678888999999999999999999888742221 1125666 6775 55443


No 94 
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=93.93  E-value=1.7  Score=37.59  Aligned_cols=60  Identities=18%  Similarity=0.277  Sum_probs=40.5

Q ss_pred             ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCC
Q 017421          171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD  238 (372)
Q Consensus       171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~  238 (372)
                      ..++|+|.||++++++--..|.|++++..++....+........    .    ..-......|+|+|+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~----~----~~ge~GLLgia~~Pd   87 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVN----D----ADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCC----C----TTSSCSEEEEEECTT
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCcccc----c----cCCCCceeeEEeCCC
Confidence            47899999999988776457999999988877544433221110    0    012246889999995


No 95 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=93.82  E-value=1.4  Score=39.40  Aligned_cols=74  Identities=14%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             CeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccccC-----CCCCe--eEEEeccCCC-e
Q 017421          249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLTR-----SINPC--NKYLFNPCNK-Y  320 (372)
Q Consensus       249 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~-----~~~~v--~~~~~s~~g~-~  320 (372)
                      |.|.-||+.+++.+.+... ..+...-.+. ..+.++++|+.||.++-+|.++.+.     ....+  .=+.+..+|+ +
T Consensus       438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~-TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqy  515 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLS-TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQY  515 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEE-SSSCCCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cceEEEeCCCCeEeeeccC-CCCCCCceeE-ECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence            5688899999998877652 2222222333 4567888999999999999986541     11111  1245566775 5


Q ss_pred             EEEE
Q 017421          321 LIIY  324 (372)
Q Consensus       321 l~~~  324 (372)
                      |++.
T Consensus       516 v~v~  519 (560)
T d1kv9a2         516 VAIM  519 (560)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544


No 96 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.67  E-value=1.3  Score=35.20  Aligned_cols=170  Identities=10%  Similarity=-0.020  Sum_probs=97.0

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeecceeeccccc
Q 017421          138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGL  216 (372)
Q Consensus       138 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~  216 (372)
                      +|+.+.. ..|+-.++.+.....-   . .....+.+++|++..+.|.-+. ..+.|...++..............    
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~~~---~-~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~----   73 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYTSL---I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----   73 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEE---E-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----
T ss_pred             EEEEECC-CeEEEEECCCCcceee---e-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEe----
Confidence            3444443 4588888876532221   1 2233578899999888777664 456677666653221111110000    


Q ss_pred             ceeccCCCCccccEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEeecCCCCeEEEEEeCCCCCEEEEEe-CCCeE
Q 017421          217 DFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLC  294 (372)
Q Consensus       217 ~~~~~~~~~h~~~i~~~~~sp~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i  294 (372)
                              .....+..+++.+.+..|... ...+.|.+.++........+.........++++|..|.++.+-. ..+.|
T Consensus        74 --------~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I  145 (266)
T d1ijqa1          74 --------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI  145 (266)
T ss_dssp             --------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred             --------CCCCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcce
Confidence                    011245678888766655544 45678999999876655555555667899999944555554432 33456


Q ss_pred             EEEecc-----cc-cCCCCCeeEEEeccCCCeEEEE
Q 017421          295 KVNSVL-----LL-TRSINPCNKYLFNPCNKYLIIY  324 (372)
Q Consensus       295 ~vwd~~-----~~-~~~~~~v~~~~~s~~g~~l~~~  324 (372)
                      .-.++.     .+ ...-....++++.+.++.|..+
T Consensus       146 ~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~  181 (266)
T d1ijqa1         146 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV  181 (266)
T ss_dssp             EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             eEeccCCCceecccccccceeeEEEeeccccEEEEe
Confidence            555554     11 1223456788888887777655


No 97 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.94  E-value=1.4  Score=37.04  Aligned_cols=142  Identities=10%  Similarity=0.059  Sum_probs=77.0

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME  204 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  204 (372)
                      ..|..++|+.|  .|++.. ++.+..++...-.......   ....++..+.++|.  .++....++.+.++++..+...
T Consensus        87 p~v~~vafs~d--~l~v~~-~~~l~~~~~~~l~~~~~~~---~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~  158 (381)
T d1xipa_          87 PDVIFVCFHGD--QVLVST-RNALYSLDLEELSEFRTVT---SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK  158 (381)
T ss_dssp             TTEEEEEEETT--EEEEEE-SSEEEEEESSSTTCEEEEE---ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred             CCeEEEEeeCC--EEEEEe-CCCEEEEEeeccccccccc---cccccccceecCCc--eeEEEecCCCEEEEEeccCccc
Confidence            36888999744  455544 4668888876542222211   12235788888774  5666777899999999888653


Q ss_pred             eecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEE-EECCCCeEEEEeecCCCCeEEEEEeCCCCC
Q 017421          205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYV-YDLEANKLSLRILAHTSDVNTVCFGDESGH  283 (372)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~i-wd~~~~~~~~~~~~~~~~v~~~~~sp~~~~  283 (372)
                      ....   ...++..        ...+.+++|++.|..++++..++ ..+ -++.....+..-......|.+|.|- .+..
T Consensus       159 ~~~~---~v~~~~~--------~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL-~~~~  225 (381)
T d1xipa_         159 QLAQ---NVTSFDV--------TNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTIL-SPQD  225 (381)
T ss_dssp             EEEE---SEEEEEE--------CSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEES-SSSE
T ss_pred             cccC---CcceEEe--------cCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEe-cCce
Confidence            3321   0000111        12577888888777777764332 111 1111111000000123467788887 5555


Q ss_pred             EEEE
Q 017421          284 LIYS  287 (372)
Q Consensus       284 ~l~s  287 (372)
                      ++++
T Consensus       226 F~vv  229 (381)
T d1xipa_         226 FLAV  229 (381)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5543


No 98 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=91.60  E-value=4.5  Score=36.23  Aligned_cols=50  Identities=12%  Similarity=0.138  Sum_probs=34.4

Q ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEEeCCCCC-EEEEE
Q 017421          238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGH-LIYSG  288 (372)
Q Consensus       238 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~~-~l~s~  288 (372)
                      .|.+++.|+.||.++.+|.++|+.+.++..... .-.-+.|. .+|+ +++..
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~-~dGkQYvav~  534 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYT-HKGTQYVAIY  534 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEE-ECCEEEEEEE
Confidence            466788899999999999999999988863221 11124455 5665 45443


No 99 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.46  E-value=2.9  Score=33.74  Aligned_cols=163  Identities=11%  Similarity=0.060  Sum_probs=96.3

Q ss_pred             CceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEeeecccCCcceEEEEECCCC---CEEEEEeC---CC
Q 017421          125 SRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ---RHLVYASM---SP  191 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---dg  191 (372)
                      ..|-.-..++++++++..+       -.|.+.+|..+....    ....+|-.....+.+.-+.   +.++.+..   .+
T Consensus       148 ~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~s----Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~  223 (327)
T d1utca2         148 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG  223 (327)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred             ceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcC----ccccceeeeeEEEEcCCCCCCceEEEEEECCCCCc
Confidence            4566667788899876532       236789999987622    2245665444444333211   23333322   36


Q ss_pred             eEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC
Q 017421          192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD  271 (372)
Q Consensus       192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  271 (372)
                      .+++.++....... .........+.|.+..   ...-.-.+..++.-..+..-+.-|.|++||+.++.++..-.-....
T Consensus       224 kLhIiEig~~~~g~-~~f~kk~vdi~fppea---~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~  299 (327)
T d1utca2         224 KLHIIEVGTPPTGN-QPFPKKAVDVFFPPEA---QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET  299 (327)
T ss_dssp             EEEEEECSCCCTTC-CCCCCEEEECCCCTTC---TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred             EEEEEEcCCCccCC-CCCcceeEEEECCccc---cCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCc
Confidence            78888887632110 0111111112222221   1234557788888788888899999999999999998877766667


Q ss_pred             eEEEEEeCCCCCEEEEEeCCCeEEE
Q 017421          272 VNTVCFGDESGHLIYSGSDDNLCKV  296 (372)
Q Consensus       272 v~~~~~sp~~~~~l~s~~~dg~i~v  296 (372)
                      |...+-. .+..=++....+|.|.-
T Consensus       300 iF~~a~~-~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         300 IFVTAPH-EATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             EEEEEEE-TTTTEEEEEETTSEEEE
T ss_pred             eEEeccC-CCCceEEEECCCCeEEE
Confidence            7655555 44444555557777643


No 100
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.31  E-value=3.5  Score=34.51  Aligned_cols=173  Identities=13%  Similarity=0.061  Sum_probs=104.1

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEE
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVER----------GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH  194 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  194 (372)
                      ....-+++++...++++|+.++ +.|..+..          +.........    ..|..++|+.+  .++.. .++.+.
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~i----p~v~~vafs~d--~l~v~-~~~~l~  108 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEI----PDVIFVCFHGD--QVLVS-TRNALY  108 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEEC----TTEEEEEEETT--EEEEE-ESSEEE
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCC----CCeEEEEeeCC--EEEEE-eCCCEE
Confidence            3466789999888888888775 66776421          1111110111    14888999754  45554 456677


Q ss_pred             EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-----cCC
Q 017421          195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-----AHT  269 (372)
Q Consensus       195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~  269 (372)
                      .++...-........                -..++..+.++|.  .++....++.+.++++..++......     .-.
T Consensus       109 ~~~~~~l~~~~~~~~----------------~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~  170 (381)
T d1xipa_         109 SLDLEELSEFRTVTS----------------FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVT  170 (381)
T ss_dssp             EEESSSTTCEEEEEE----------------CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEEC
T ss_pred             EEEeecccccccccc----------------ccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEec
Confidence            787765332111111                1126788888775  46666678999999998875432211     123


Q ss_pred             CCeEEEEEeCCCCCEEEEEeCCCeEEEE-eccc---c---cCCCCCeeEEEeccCCCeEEEEe
Q 017421          270 SDVNTVCFGDESGHLIYSGSDDNLCKVN-SVLL---L---TRSINPCNKYLFNPCNKYLIIYL  325 (372)
Q Consensus       270 ~~v~~~~~sp~~~~~l~s~~~dg~i~vw-d~~~---~---~~~~~~v~~~~~s~~g~~l~~~~  325 (372)
                      +.+.+++|+ +.|..++++..+. ..+- ++..   +   ......|.++.|-.+..++++.+
T Consensus       171 ~~~~~v~ws-~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~  231 (381)
T d1xipa_         171 NSQLAVLLK-DRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  231 (381)
T ss_dssp             SSEEEEEET-TSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CCceEEEEe-CCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEEC
Confidence            668899998 8888888874432 2221 2221   1   12345788999998878777663


No 101
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=90.76  E-value=5.4  Score=35.66  Aligned_cols=113  Identities=15%  Similarity=0.160  Sum_probs=64.0

Q ss_pred             CCcEEEEeCCCCeEEEEeeeccc-----------------------------------CCcceEEEEECCCCCEEEEEeC
Q 017421          145 ASQIRIYDVERGWKIQKDILAKS-----------------------------------LRWTVTDTSLSPDQRHLVYASM  189 (372)
Q Consensus       145 dg~i~vwd~~~~~~~~~~~~~~~-----------------------------------~~~~v~~~~~~~~~~~l~~~~~  189 (372)
                      .|.|.-+|+.+++.+-+......                                   ....-..+++.+...++..+..
T Consensus       181 ~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg  260 (596)
T d1w6sa_         181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG  260 (596)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred             cCceEEEECCCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccc
Confidence            48899999999988766432210                                   0001224566666666666543


Q ss_pred             C----------------CeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEE-cCCC---CEEEEEeCCC
Q 017421          190 S----------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF-STDG---RELVAGSSDD  249 (372)
Q Consensus       190 d----------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~-sp~~---~~l~s~s~dg  249 (372)
                      +                ..|...|+++++..-..... .+....+...      ..+..+.. ..+|   +.++....+|
T Consensus       261 ~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~-~~D~Wd~d~~------~~~~l~d~~~~~G~~~~~v~~~~k~G  333 (596)
T d1w6sa_         261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT-PHDEWDYAGV------NVMMLSEQKDKDGKARKLLTHPDRNG  333 (596)
T ss_dssp             CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS-TTCSSCCCCC------CCCEEEEEECTTSCEEEEEEEECTTS
T ss_pred             cccccccccccccccccccccccccccccccccccce-eccccCCccc------cceeeeeccccccccccceecccccc
Confidence            2                34777888888865433211 1111111111      12222221 2344   3567788889


Q ss_pred             eEEEEECCCCeEEEE
Q 017421          250 CIYVYDLEANKLSLR  264 (372)
Q Consensus       250 ~i~iwd~~~~~~~~~  264 (372)
                      .+.++|-.+++.+..
T Consensus       334 ~~~vlDr~tG~~i~~  348 (596)
T d1w6sa_         334 IVYTLDRTDGALVSA  348 (596)
T ss_dssp             EEEEEETTTCCEEEE
T ss_pred             ceeeecCCCCceeee
Confidence            999999999987654


No 102
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=84.34  E-value=9.7  Score=31.31  Aligned_cols=131  Identities=15%  Similarity=0.186  Sum_probs=74.7

Q ss_pred             ceEEEEE--CCC-CC-EEEEEeCCCcEEEEeCC---CCeEEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 017421          126 RAYVSQF--SAD-GS-LFVAGFQASQIRIYDVE---RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV  198 (372)
Q Consensus       126 ~v~~~~~--s~~-~~-~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~  198 (372)
                      .++++|+  ++. |. ++++...+|.+..|.+.   .+...............+-.|.+.+....|+.+-.+.-|+.++.
T Consensus       129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a  208 (353)
T d1h6la_         129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYIAEEDEAIWKFSA  208 (353)
T ss_dssp             SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred             cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEEecCccceEEEEe
Confidence            4777777  664 54 45666778998888763   23222222212223346889999999899999988877776766


Q ss_pred             CCCceeeecceeecccccceeccCCCCccccEEEEEEcC--CCC-EEEEE-eCCCeEEEEECCCC-eEEEEe
Q 017421          199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGR-ELVAG-SSDDCIYVYDLEAN-KLSLRI  265 (372)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp--~~~-~l~s~-s~dg~i~iwd~~~~-~~~~~~  265 (372)
                      ............. ..+        ......+-.|+.-.  ++. +|+++ -.+.+..+||.... +.+..+
T Consensus       209 ~~~~~~~~~~i~~-~~g--------~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F  271 (353)
T d1h6la_         209 EPDGGSNGTVIDR-ADG--------RHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADF  271 (353)
T ss_dssp             STTSCSCCEEEEE-CSS--------SSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             ccCCCccceeeec-ccC--------ccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceE
Confidence            4322111111000 000        01234677777543  333 55544 45788999998764 444444


No 103
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=74.39  E-value=15  Score=27.74  Aligned_cols=38  Identities=11%  Similarity=0.164  Sum_probs=28.0

Q ss_pred             ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecce
Q 017421          171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV  209 (372)
Q Consensus       171 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  209 (372)
                      .|.++++. +.+..++|+......+|-++.|+...+..+
T Consensus       105 RI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~v  142 (313)
T d2hu7a1         105 RILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARL  142 (313)
T ss_dssp             EEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEE
T ss_pred             EEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccC
Confidence            56677665 456677788888899999999987665543


No 104
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=62.53  E-value=26  Score=25.85  Aligned_cols=148  Identities=11%  Similarity=-0.022  Sum_probs=77.9

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeE--E--EEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--I--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS  200 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~  200 (372)
                      ..+.-++|||+|++.++-.  +.+++=...+...  .  .......+.=.....+.|+|.|-+.++.  ++.++-=..-+
T Consensus        40 ~n~~~i~fsP~G~LyaVr~--~~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G~LyaVt--~~~LYr~~pPt  115 (235)
T d1tl2a_          40 SNFKFLFLSPGGELYGVLN--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS--KDKLYKASPPQ  115 (235)
T ss_dssp             TTCSEEEECTTSCEEEEET--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--TTEEEEESCCC
T ss_pred             cceeEEEECCCCcEEEEEC--CeEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCceEEEec--CcceecCCcCc
Confidence            4566789999999887643  3444444332100  0  0001111222356788999998766655  45444322222


Q ss_pred             CceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------EEEEee-cCCCCeE
Q 017421          201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK------LSLRIL-AHTSDVN  273 (372)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~------~~~~~~-~~~~~v~  273 (372)
                      ..+..-.......         ..+..+.+..+-|.|+|.+.++ ..+ .+..+....+.      .-.++. ++-....
T Consensus       116 n~~q~W~g~a~~v---------G~~gw~df~~lFFdP~G~LYaV-~~~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~~  184 (235)
T d1tl2a_         116 SDTDNWIARATEV---------GSGGWSGFKFLFFHPNGYLYAV-HGQ-QFYKALPPVSNQDNWLARATKIGQGGWDTFK  184 (235)
T ss_dssp             STTCCHHHHSEEE---------ECSSGGGEEEEEECTTSCEEEE-ETT-EEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred             ccchhhhhhhhhh---------ccCCcCceeEEEECCCceEEEE-ECC-cEEEcCCCCCCCchhhhhhhhhccCcccCce
Confidence            2211000000000         0123457888999999987776 333 46666644321      111222 4445567


Q ss_pred             EEEEeCCCCCEEEEE
Q 017421          274 TVCFGDESGHLIYSG  288 (372)
Q Consensus       274 ~~~~sp~~~~~l~s~  288 (372)
                      -+.|+ |+|++..+-
T Consensus       185 fi~Fs-~dG~L~~v~  198 (235)
T d1tl2a_         185 FLFFS-SVGTLFGVQ  198 (235)
T ss_dssp             EEEEC-TTSCEEEEE
T ss_pred             EEEEC-CCCcEEEEe
Confidence            88898 999877763


No 105
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.26  E-value=35  Score=25.94  Aligned_cols=57  Identities=7%  Similarity=-0.018  Sum_probs=29.4

Q ss_pred             cEEEEeCCCCeEEEEeeecccCCcceEEEEECCCCCEEEEEeC---------CCeEEEEECCCCceeee
Q 017421          147 QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---------SPIVHIVDVGSGTMESL  206 (372)
Q Consensus       147 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~  206 (372)
                      .+.+||+.+++-.. ..........-..+.+  +++.++.|+.         -..+.+||..+......
T Consensus        20 ~~~~yd~~t~~W~~-~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~   85 (288)
T d1zgka1          20 YLEAYNPSNGTWLR-LADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPC   85 (288)
T ss_dssp             CEEEEETTTTEEEE-CCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEEC
T ss_pred             eEEEEECCCCeEEE-CCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhccccccccccc
Confidence            57899998874222 1112221222222222  4556666542         23577888877765433


No 106
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.58  E-value=39  Score=25.65  Aligned_cols=60  Identities=15%  Similarity=0.175  Sum_probs=31.2

Q ss_pred             CCEEEEEeCC-----CeEEEEECCCCeEEEEeecCCC-CeEEEEEeCCCCCEEEEEeCCCe-----EEEEecc
Q 017421          239 GRELVAGSSD-----DCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGHLIYSGSDDNL-----CKVNSVL  300 (372)
Q Consensus       239 ~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~~~l~s~~~dg~-----i~vwd~~  300 (372)
                      +..++.|+.+     .....+|..+.+....-..... .-.+++..  ++++++.|+.++.     |.+||+.
T Consensus       196 ~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~  266 (288)
T d1zgka1         196 NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPD  266 (288)
T ss_dssp             TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred             eeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEE--CCEEEEEecCCCCeecceEEEEECC
Confidence            4555665443     3467888877654322111111 11233443  5777777765432     5666665


No 107
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.96  E-value=62  Score=25.70  Aligned_cols=185  Identities=10%  Similarity=0.049  Sum_probs=101.2

Q ss_pred             eEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeE-----EEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 017421          127 AYVSQFSA--DGSLFVAGFQASQIRIYDVERGWK-----IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG  199 (372)
Q Consensus       127 v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~  199 (372)
                      +..+...+  +..+|+..+..|.++..++..-..     -.....+. ....+..+....+...++.++..|.+..++..
T Consensus        95 i~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~-~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~  173 (323)
T d1wp5a_          95 IKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELFLVTHNGYALWFDES  173 (323)
T ss_dssp             EEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEEEEETTSEEEEEEGG
T ss_pred             EEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhcccc-ccccccceeccCCCeEEEEEEecceeeEeecc
Confidence            34444443  357888889999999998753211     01111222 23356677777777789999999999999875


Q ss_pred             CCceeeecceeecccccceeccCCCCccccEEEE-EEcCCCCEEEEEeCCCeEEEEECCCC-------eEEEEee---cC
Q 017421          200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL-KFSTDGRELVAGSSDDCIYVYDLEAN-------KLSLRIL---AH  268 (372)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~sp~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~---~~  268 (372)
                      .-..  .........++.+...      ..+-.. ...+++..|++.+..|..+.-.+..-       +-+..+.   ..
T Consensus       174 ~vr~--~gr~a~GV~~ikL~~~------D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~~~k~~k~~  245 (323)
T d1wp5a_         174 EVSI--VGVRAAGVKGMNLKEG------DYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKAN  245 (323)
T ss_dssp             GSCB--CCSSCCCEECCCCCTT------CCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSS
T ss_pred             cccc--cCcccccccccccccc------cccchhhhccccccceeeeeeeheeecccchhhccccccccccccccccccc
Confidence            4222  1111122222222222      244443 44556778888999998887665431       1112221   12


Q ss_pred             CCCeEEEEEeCCCCCEEEEEeCCCeEEEEecccc---cCCCCCeeEEEeccCCCeE
Q 017421          269 TSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLLL---TRSINPCNKYLFNPCNKYL  321 (372)
Q Consensus       269 ~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~v~~~~~s~~g~~l  321 (372)
                      ...|..+... .+...|+..+..|.+.-.++..+   ......+.-+...++++.+
T Consensus       246 ~~~v~~~~~~-~~~d~l~l~T~~g~~~r~~~~~i~~~gR~~~Gv~~~~l~~~d~vv  300 (323)
T d1wp5a_         246 PHRISGFVVA-QDSDTIYLQTEKSFIETIKVGDIRFSDRYSNGSFVLDEEENGRVI  300 (323)
T ss_dssp             CCCEEEEEEE-CTTCEEEEEETTSCEEEEEGGGSCBCCSSSCCEESSCHHHHCCEE
T ss_pred             cceeeeeEec-CCCCEEEEEeCCCEEEEEEhhhcCcCCCcCCCeEEEECCCCCEEE
Confidence            2345555555 55566666777787665555432   2233344444444444443


No 108
>d1olza2 b.69.12.1 (A:3-480) Semaphorin 4d {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.29  E-value=1.2e+02  Score=25.45  Aligned_cols=72  Identities=15%  Similarity=0.094  Sum_probs=45.9

Q ss_pred             CCceEEEEEC----CCC---CEEEEEeCCCcE-EEEeCCCCeEEEEeeecccCCcceEEEEECCC--CCEEEEEeCCCeE
Q 017421          124 TSRAYVSQFS----ADG---SLFVAGFQASQI-RIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIV  193 (372)
Q Consensus       124 ~~~v~~~~~s----~~~---~~l~~~~~dg~i-~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i  193 (372)
                      ....+.|+.+    .++   ..+..|..+|.| ++.-...+..+...........+|..+.++++  +.+|++++.++.+
T Consensus       394 ~~~~T~IaV~~v~~~~~~~~tV~flGT~~G~i~Kvv~~~~~~~~iee~~~~~~~~pV~~~~l~~~~~~~~LyV~t~~~V~  473 (478)
T d1olza2         394 DVNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVV  473 (478)
T ss_dssp             SCCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEE
T ss_pred             CCcEEEEEEEEEecCCCCEEEEEEEECCCceEEEEEEcCCCceEEEEEEecCCCCceeeEEeccCCCCcEEEEEcCCeEE
Confidence            3456666653    333   356778889976 44555555444443444456668999999875  4578888888776


Q ss_pred             EE
Q 017421          194 HI  195 (372)
Q Consensus       194 ~v  195 (372)
                      +|
T Consensus       474 kv  475 (478)
T d1olza2         474 QA  475 (478)
T ss_dssp             EE
T ss_pred             EE
Confidence            65


No 109
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.70  E-value=1.1e+02  Score=24.12  Aligned_cols=166  Identities=7%  Similarity=0.020  Sum_probs=88.0

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEe---CCC------CeEEEEeeecccCCcceEEEEECC--CCCEEEEEeCCCeEE
Q 017421          126 RAYVSQFSADGSLFVAGFQASQIRIYD---VER------GWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVH  194 (372)
Q Consensus       126 ~v~~~~~s~~~~~l~~~~~dg~i~vwd---~~~------~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~  194 (372)
                      .+..+-.......|+.-+..|.++...   +..      |..+............+..+...+  ...+|+..+..|.++
T Consensus        40 ~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iK  119 (323)
T d1wp5a_          40 RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVK  119 (323)
T ss_dssp             CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEE
T ss_pred             eEEEEEEEcCCCEEEEEecCCEEEEEeeccCcccccccccccceeeecccCCcceEEEeeccccccceeEEEEeehhhee
Confidence            344443333344455556667655443   332      223322222222222333444443  467888999999999


Q ss_pred             EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE-------EEEeec
Q 017421          195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-------SLRILA  267 (372)
Q Consensus       195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~~~  267 (372)
                      ...+..-.......   ....+...      -...+..+....+...++.++..|.+..|+...-..       +.-+.-
T Consensus       120 r~~l~~f~~~~~~~---g~~~i~L~------~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL  190 (323)
T d1wp5a_         120 KTELKHYKAQRYSK---PLTGINLK------NDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL  190 (323)
T ss_dssp             EEEGGGGCCSCCSS---CEECSCCC------TTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC
T ss_pred             eccHHHhhhhhccc---hhhhcccc------ccccccceeccCCCeEEEEEEecceeeEeecccccccCccccccccccc
Confidence            98875322100000   00000000      112566666666667888889999999998753211       111221


Q ss_pred             -CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421          268 -HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL  300 (372)
Q Consensus       268 -~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~  300 (372)
                       ....|.+....++++..|++.+..|..+.-.+.
T Consensus       191 ~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~  224 (323)
T d1wp5a_         191 KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT  224 (323)
T ss_dssp             CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             ccccccchhhhccccccceeeeeeeheeecccch
Confidence             234455544443677788888899998887665


No 110
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=31.74  E-value=24  Score=25.06  Aligned_cols=27  Identities=7%  Similarity=0.058  Sum_probs=21.8

Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEE
Q 017421          229 GIFSLKFSTDGRELVAGSSDDCIYVYD  255 (372)
Q Consensus       229 ~i~~~~~sp~~~~l~s~s~dg~i~iwd  255 (372)
                      -+..--|+.+|.++++.+++|-+++.|
T Consensus       145 l~~g~i~~~dG~LvAs~~QEgl~R~~~  171 (171)
T d1c8ua2         145 FVRGEFYTQDGVLVASTVQEGVMRNHN  171 (171)
T ss_dssp             EEEEEEEETTCCEEEEEEEEEEEEECC
T ss_pred             EEEEEEECCCCCEEEEEEEEEEEEecC
Confidence            455556899999999999999888743


No 111
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=31.44  E-value=29  Score=22.90  Aligned_cols=47  Identities=13%  Similarity=-0.034  Sum_probs=23.5

Q ss_pred             CeEEEEEeCCCCCEEEEEeCCCeEEEEecccccCCCCCeeEEEeccCCCeEE
Q 017421          271 DVNTVCFGDESGHLIYSGSDDNLCKVNSVLLLTRSINPCNKYLFNPCNKYLI  322 (372)
Q Consensus       271 ~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~~~~~~~~v~~~~~s~~g~~l~  322 (372)
                      ....+.+. ++|++++.-. ++. .+|...+.  ....-+.+.+.+||.+++
T Consensus        56 ~~~~l~l~-~dGNLvl~d~-~~~-~vWsS~t~--~~~g~y~l~Lq~DGNlvl  102 (115)
T d1dlpa1          56 TGCRAVLQ-SDGLLVILTA-QNT-IRWSSGTK--GSIGNYVLVLQPDRTVTI  102 (115)
T ss_dssp             SCCBCCBC-SSSCBCCBCT-TTC-CSCCCCCC--CCSSCCEEEECSSSCEEE
T ss_pred             CceEEEEe-ccCCEEEEcc-CCC-EEEEcCCC--CCCCCEEEEECCCCcEEE
Confidence            34456666 7777655432 332 35643322  222234456667776544


No 112
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=31.44  E-value=91  Score=22.84  Aligned_cols=139  Identities=10%  Similarity=0.000  Sum_probs=74.1

Q ss_pred             cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCCC
Q 017421          170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD  249 (372)
Q Consensus       170 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~dg  249 (372)
                      ..+.-+.|+|++.+.++-.  +.++.=.+.+.....-.......-         .+--+...-+-|+|.|-+.++.  ++
T Consensus        40 ~n~~~i~fsP~G~LyaVr~--~~lY~Gp~~s~~nq~wf~~atrIG---------~ggWn~FkflffdP~G~LyaVt--~~  106 (235)
T d1tl2a_          40 SNFKFLFLSPGGELYGVLN--DKIYKGTPPTHDNDNWMGRAKKIG---------NGGWNQFQFLFFDPNGYLYAVS--KD  106 (235)
T ss_dssp             TTCSEEEECTTSCEEEEET--TEEEEESCCCSTTCCHHHHCEEEE---------CSCGGGCSEEEECTTSCEEEEE--TT
T ss_pred             cceeEEEECCCCcEEEEEC--CeEEECCCCCcchHHHHHhhhhcc---------cCcccceEEEEECCCceEEEec--Cc
Confidence            4577899999999877653  345443333222111111000000         0122345568899999655555  35


Q ss_pred             eEEEEECCCCeE------EEEe-ecCCCCeEEEEEeCCCCCEEEEEeCCCeEEEEeccc------------c-cCCCCCe
Q 017421          250 CIYVYDLEANKL------SLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVLL------------L-TRSINPC  309 (372)
Q Consensus       250 ~i~iwd~~~~~~------~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~~------------~-~~~~~~v  309 (372)
                      .++-=...+.++      ...+ ...-+.+..+-|. |+|.+.++. .| .+.-+...+            + .++-...
T Consensus       107 ~LYr~~pPtn~~q~W~g~a~~vG~~gw~df~~lFFd-P~G~LYaV~-~~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~  183 (235)
T d1tl2a_         107 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH-GQ-QFYKALPPVSNQDNWLARATKIGQGGWDTF  183 (235)
T ss_dssp             EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE-TT-EEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred             ceecCCcCcccchhhhhhhhhhccCCcCceeEEEEC-CCceEEEEE-CC-cEEEcCCCCCCCchhhhhhhhhccCcccCc
Confidence            443322222211      0111 1122367778888 999887774 33 466665431            1 1344455


Q ss_pred             eEEEeccCCCeEEEE
Q 017421          310 NKYLFNPCNKYLIIY  324 (372)
Q Consensus       310 ~~~~~s~~g~~l~~~  324 (372)
                      .-+.|+|+|.+-.+.
T Consensus       184 ~fi~Fs~dG~L~~v~  198 (235)
T d1tl2a_         184 KFLFFSSVGTLFGVQ  198 (235)
T ss_dssp             EEEEECTTSCEEEEE
T ss_pred             eEEEECCCCcEEEEe
Confidence            788999999877764


No 113
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=29.42  E-value=1.1e+02  Score=22.98  Aligned_cols=144  Identities=13%  Similarity=0.154  Sum_probs=79.8

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEeeecccCCcceEEE--------EE-CCCCCEEEEEeC-CCeEE
Q 017421          125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT--------SL-SPDQRHLVYASM-SPIVH  194 (372)
Q Consensus       125 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~--------~~-~~~~~~l~~~~~-dg~i~  194 (372)
                      -+|.+++.. +.+..++|+......+|-++.+. +.++....+.. -|+.+        .+ .+..+-++++.. .|.++
T Consensus       104 vRI~S~~yd-dk~vvF~Gased~~~LYviegGk-lrkL~~vPpFs-FVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lr  180 (313)
T d2hu7a1         104 MRILSGVDT-GEAVVFTGATEDRVALYALDGGG-LRELARLPGFG-FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR  180 (313)
T ss_dssp             BEEEEEEEC-SSCEEEEEECSSCEEEEEEETTE-EEEEEEESSCE-EEEEEETTEEEEEEEEETTEEEEEEEETTTEEEE
T ss_pred             EEEEEeeec-CceEEEecccCCceEEEEEeCCc-eeeeccCCCcc-eEEeccCCeEEEEeeecCCcceEEEEecccCCEE
Confidence            445555553 45566788877788899988873 34433333322 23333        22 222222344443 55555


Q ss_pred             EEECCCCceeeecceeecccccceeccCCCCccccEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeEEEE-eec---
Q 017421          195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---DCIYVYDLEANKLSLR-ILA---  267 (372)
Q Consensus       195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~l~s~s~d---g~i~iwd~~~~~~~~~-~~~---  267 (372)
                      +++...|                           .++.....+..+. +++-..   ....-+|+++++.-.. +..   
T Consensus       181 i~tpkeG---------------------------S~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~  232 (313)
T d2hu7a1         181 VFDSGEG---------------------------SFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDF  232 (313)
T ss_dssp             EECCSSE---------------------------EEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHH
T ss_pred             EecCCCC---------------------------cccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccc
Confidence            5554433                           4566666776554 443321   2233558887653221 111   


Q ss_pred             ---CCCCeEEEEEeCCCCCEEEEEeCCCeEEEEecc
Q 017421          268 ---HTSDVNTVCFGDESGHLIYSGSDDNLCKVNSVL  300 (372)
Q Consensus       268 ---~~~~v~~~~~sp~~~~~l~s~~~dg~i~vwd~~  300 (372)
                         ....|+-+-+. |++++++.+-.||.-++++-.
T Consensus       233 ~sy~p~~I~~~~Y~-Pdd~L~iiakrdG~s~lF~nG  267 (313)
T d2hu7a1         233 SSYRPTAITWLGYL-PDGRLAVVARREGRSAVFIDG  267 (313)
T ss_dssp             HHHCCSEEEEEEEC-TTSCEEEEEEETTEEEEEETT
T ss_pred             eeecceEEEeeeeC-CCCcEEEEEecCCchheeecc
Confidence               12344556688 999998999999999998754


No 114
>d2nt0a1 b.71.1.2 (A:1-77,A:432-497) Glucosylceramidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.62  E-value=84  Score=21.50  Aligned_cols=49  Identities=12%  Similarity=0.059  Sum_probs=33.0

Q ss_pred             ccEEEEEE-cCCCCEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCeEEEEEe
Q 017421          228 FGIFSLKF-STDGRELVAGSSD----DCIYVYDLEANKLSLRILAHTSDVNTVCFG  278 (372)
Q Consensus       228 ~~i~~~~~-sp~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s  278 (372)
                      ..+..++| +|||..++....+    -.+.|++...+.....+.+|  .|..+.|.
T Consensus        88 ~~L~~vAF~nPDgs~vlVv~N~s~~~~~~~i~~~~~~~~~~~lpa~--Si~T~vw~  141 (143)
T d2nt0a1          88 NDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGY--SIHTYLWH  141 (143)
T ss_dssp             CSEEEEEEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECTT--EEEEEEEC
T ss_pred             CcceEEEEECCCCCEEEEEEeCCCCCeEEEEEeCCCCEEEEEeCCC--EEEEEEEe
Confidence            47888999 8999877665433    35778877766655566543  56666664


No 115
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.53  E-value=78  Score=26.88  Aligned_cols=59  Identities=14%  Similarity=0.213  Sum_probs=36.7

Q ss_pred             CEEEEEeCCCcEE-EEeCCCCe------EEEEeeecccCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 017421          137 SLFVAGFQASQIR-IYDVERGW------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI  195 (372)
Q Consensus       137 ~~l~~~~~dg~i~-vwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  195 (372)
                      ..+..|..+|.|+ +.-...+.      .+...........+|..+.+++++.+|++++.++.++|
T Consensus       422 tV~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~~Lyv~t~~~V~~v  487 (495)
T d1q47a_         422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL  487 (495)
T ss_dssp             EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred             EEEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCCEEEEEeCCeEEEE
Confidence            3466788888875 43322211      11111222345567999999999999999998876654


No 116
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=22.58  E-value=23  Score=25.23  Aligned_cols=25  Identities=20%  Similarity=0.234  Sum_probs=17.9

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEE
Q 017421          127 AYVSQFSADGSLFVAGFQASQIRIY  151 (372)
Q Consensus       127 v~~~~~s~~~~~l~~~~~dg~i~vw  151 (372)
                      +.+--|+.+|.++|++.++|.|++.
T Consensus       146 ~~g~i~~~dG~LvAs~~QEgl~R~~  170 (171)
T d1c8ua2         146 VRGEFYTQDGVLVASTVQEGVMRNH  170 (171)
T ss_dssp             EEEEEEETTCCEEEEEEEEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEEEEEEEEec
Confidence            4444577888888888888777764


Done!