Query 017423
Match_columns 372
No_of_seqs 167 out of 1798
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 08:26:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017423.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017423hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 3.4E-36 7.5E-41 283.6 37.7 292 39-331 49-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 2.3E-36 5.1E-41 280.6 32.6 293 40-334 3-298 (302)
3 KOG1444 Nucleotide-sugar trans 100.0 2E-36 4.4E-41 268.1 25.9 290 42-335 15-306 (314)
4 KOG1441 Glucose-6-phosphate/ph 100.0 1.5E-34 3.2E-39 262.4 12.4 290 39-335 17-313 (316)
5 PLN00411 nodulin MtN21 family 100.0 4.5E-29 9.6E-34 234.5 31.3 281 39-331 13-330 (358)
6 KOG1443 Predicted integral mem 100.0 5.6E-29 1.2E-33 217.6 22.6 295 34-329 11-315 (349)
7 COG5070 VRG4 Nucleotide-sugar 100.0 1.4E-29 3.1E-34 211.4 15.5 284 43-335 10-302 (309)
8 PF08449 UAA: UAA transporter 100.0 3.3E-27 7.1E-32 219.0 33.1 272 55-334 16-302 (303)
9 KOG1442 GDP-fucose transporter 100.0 2.4E-30 5.1E-35 222.4 2.8 290 39-333 28-331 (347)
10 PRK11689 aromatic amino acid e 100.0 1.3E-25 2.9E-30 207.5 31.6 255 54-331 19-289 (295)
11 PRK11272 putative DMT superfam 100.0 4E-25 8.7E-30 204.1 34.4 260 54-331 23-287 (292)
12 PRK10532 threonine and homoser 100.0 7.2E-25 1.6E-29 202.5 33.2 256 54-334 27-286 (293)
13 PRK11453 O-acetylserine/cystei 100.0 1.1E-24 2.4E-29 201.9 34.1 263 54-331 19-289 (299)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 2.2E-24 4.8E-29 196.0 30.5 254 54-325 4-260 (260)
15 PRK15430 putative chlorampheni 99.9 6.9E-23 1.5E-27 189.5 31.4 259 54-329 23-285 (296)
16 PF06027 DUF914: Eukaryotic pr 99.9 9.1E-22 2E-26 181.3 30.0 277 42-331 18-307 (334)
17 KOG1581 UDP-galactose transpor 99.9 1.5E-20 3.2E-25 165.1 24.2 262 64-333 47-317 (327)
18 KOG1580 UDP-galactose transpor 99.9 5.2E-22 1.1E-26 167.5 13.7 258 64-329 49-313 (337)
19 TIGR03340 phn_DUF6 phosphonate 99.9 3E-20 6.6E-25 170.7 25.7 257 54-326 16-280 (281)
20 COG0697 RhaT Permeases of the 99.9 9.4E-18 2E-22 154.5 34.7 261 54-330 22-288 (292)
21 TIGR00688 rarD rarD protein. T 99.8 3.2E-18 6.9E-23 155.2 28.4 229 54-304 17-255 (256)
22 KOG1582 UDP-galactose transpor 99.8 5.4E-19 1.2E-23 152.4 20.4 271 53-331 57-334 (367)
23 COG5006 rhtA Threonine/homoser 99.8 1.2E-17 2.5E-22 143.1 27.2 250 57-331 30-284 (292)
24 KOG1583 UDP-N-acetylglucosamin 99.8 3.1E-18 6.7E-23 148.2 11.9 279 42-331 9-316 (330)
25 TIGR00776 RhaT RhaT L-rhamnose 99.7 3E-15 6.4E-20 137.9 28.0 249 55-330 17-289 (290)
26 KOG4510 Permease of the drug/m 99.7 6.5E-19 1.4E-23 151.7 3.0 273 42-333 42-329 (346)
27 PF03151 TPT: Triose-phosphate 99.7 3.1E-16 6.7E-21 130.8 16.7 146 184-329 1-153 (153)
28 KOG2234 Predicted UDP-galactos 99.7 1.5E-14 3.3E-19 131.0 28.2 271 53-332 29-325 (345)
29 PF04142 Nuc_sug_transp: Nucle 99.7 4.6E-15 1E-19 132.4 21.5 214 98-319 13-243 (244)
30 KOG3912 Predicted integral mem 99.7 9.9E-15 2.1E-19 126.8 22.1 278 47-330 11-335 (372)
31 COG2962 RarD Predicted permeas 99.6 8.1E-13 1.7E-17 116.6 27.7 268 42-331 11-285 (293)
32 KOG2765 Predicted membrane pro 99.6 1.3E-13 2.9E-18 124.8 17.4 212 113-332 170-393 (416)
33 KOG2766 Predicted membrane pro 99.4 3.3E-13 7.2E-18 116.0 3.4 265 45-331 26-301 (336)
34 TIGR00803 nst UDP-galactose tr 99.3 3E-11 6.4E-16 107.1 12.9 191 126-327 2-222 (222)
35 COG2510 Predicted membrane pro 99.2 2.5E-10 5.4E-15 88.2 9.6 136 184-329 4-139 (140)
36 PF00892 EamA: EamA-like trans 99.1 4E-10 8.7E-15 90.0 10.8 117 54-173 6-124 (126)
37 PF00892 EamA: EamA-like trans 99.1 1.2E-09 2.6E-14 87.2 10.1 124 193-328 1-125 (126)
38 COG2510 Predicted membrane pro 99.0 1.2E-08 2.5E-13 79.0 11.2 121 53-175 17-139 (140)
39 PF06800 Sugar_transport: Suga 98.9 3.9E-07 8.5E-12 81.4 20.8 214 95-326 36-268 (269)
40 PF13536 EmrE: Multidrug resis 98.9 1.6E-08 3.6E-13 79.5 10.4 105 73-179 2-110 (113)
41 PRK15430 putative chlorampheni 98.9 1.3E-07 2.9E-12 87.5 17.6 140 180-328 5-144 (296)
42 TIGR00688 rarD rarD protein. T 98.8 2.3E-07 5.1E-12 84.0 17.3 140 183-328 2-141 (256)
43 KOG4314 Predicted carbohydrate 98.8 2.9E-07 6.3E-12 76.7 13.6 218 103-331 54-278 (290)
44 TIGR03340 phn_DUF6 phosphonate 98.8 2.5E-07 5.5E-12 85.0 15.0 132 185-329 3-135 (281)
45 PRK02971 4-amino-4-deoxy-L-ara 98.6 2.4E-06 5.2E-11 68.4 15.0 120 183-331 2-124 (129)
46 TIGR00950 2A78 Carboxylate/Ami 98.5 6E-06 1.3E-10 74.8 17.0 115 54-170 143-259 (260)
47 PLN00411 nodulin MtN21 family 98.5 7.3E-06 1.6E-10 77.6 16.8 137 183-329 13-156 (358)
48 PF05653 Mg_trans_NIPA: Magnes 98.3 1.1E-05 2.4E-10 74.4 13.5 64 111-175 59-122 (300)
49 PF13536 EmrE: Multidrug resis 98.3 2.5E-05 5.5E-10 61.3 13.0 71 260-331 37-108 (113)
50 PRK11272 putative DMT superfam 98.2 0.00012 2.5E-09 67.7 16.6 129 186-329 11-141 (292)
51 COG2962 RarD Predicted permeas 98.2 0.00012 2.6E-09 65.4 15.5 141 181-331 5-146 (293)
52 PRK15051 4-amino-4-deoxy-L-ara 98.1 0.00013 2.9E-09 56.9 14.0 56 274-329 54-109 (111)
53 PRK10532 threonine and homoser 98.1 0.00018 3.9E-09 66.5 17.1 117 54-174 163-280 (293)
54 PTZ00343 triose or hexose phos 98.1 0.00018 3.8E-09 68.3 17.3 133 186-329 52-186 (350)
55 PRK11689 aromatic amino acid e 98.1 0.00014 3.1E-09 67.2 15.8 117 54-175 171-287 (295)
56 PRK15051 4-amino-4-deoxy-L-ara 98.1 0.00014 3.1E-09 56.7 12.9 62 112-174 47-108 (111)
57 PRK13499 rhamnose-proton sympo 98.0 0.013 2.9E-07 54.8 26.2 231 98-330 69-342 (345)
58 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.0002 4.2E-09 66.1 13.7 132 184-331 2-138 (290)
59 PRK11453 O-acetylserine/cystei 97.9 0.00035 7.5E-09 64.8 15.3 124 186-329 7-132 (299)
60 KOG2922 Uncharacterized conser 97.9 7.7E-05 1.7E-09 67.4 10.3 214 111-333 73-310 (335)
61 TIGR00817 tpt Tpt phosphate/ph 97.8 0.00088 1.9E-08 62.2 16.2 123 195-328 14-136 (302)
62 PF03151 TPT: Triose-phosphate 97.8 0.0024 5.2E-08 52.7 15.8 121 53-174 14-152 (153)
63 PF08449 UAA: UAA transporter 97.7 0.0016 3.6E-08 60.4 15.3 129 194-334 11-141 (303)
64 PRK10452 multidrug efflux syst 97.5 0.00085 1.8E-08 52.8 9.1 66 266-331 38-105 (120)
65 COG0697 RhaT Permeases of the 97.5 0.0074 1.6E-07 55.1 16.6 140 182-332 6-146 (292)
66 PRK09541 emrE multidrug efflux 97.4 0.0016 3.5E-08 50.5 9.3 67 265-331 37-105 (110)
67 PF04657 DUF606: Protein of un 97.4 0.013 2.7E-07 47.7 14.8 131 185-326 3-138 (138)
68 PF04142 Nuc_sug_transp: Nucle 97.4 0.001 2.3E-08 59.5 9.2 74 259-332 19-92 (244)
69 PF06027 DUF914: Eukaryotic pr 97.3 0.0072 1.6E-07 56.5 14.5 70 262-331 84-153 (334)
70 PRK13499 rhamnose-proton sympo 97.2 0.011 2.3E-07 55.4 14.2 139 182-331 6-155 (345)
71 PRK02971 4-amino-4-deoxy-L-ara 97.2 0.0035 7.5E-08 50.2 9.5 66 111-177 57-124 (129)
72 PRK10650 multidrug efflux syst 97.1 0.014 3.1E-07 45.1 11.6 64 109-173 42-106 (109)
73 PRK10452 multidrug efflux syst 97.0 0.0051 1.1E-07 48.4 8.7 69 106-175 34-103 (120)
74 COG2076 EmrE Membrane transpor 97.0 0.0073 1.6E-07 46.0 9.0 64 268-331 40-105 (106)
75 COG4975 GlcU Putative glucose 97.0 0.00028 6.1E-09 61.3 1.1 218 95-330 52-286 (288)
76 PRK11431 multidrug efflux syst 97.0 0.017 3.7E-07 44.3 10.8 65 109-174 36-101 (105)
77 PRK10650 multidrug efflux syst 96.9 0.0099 2.1E-07 46.0 9.0 62 267-328 44-107 (109)
78 COG2076 EmrE Membrane transpor 96.9 0.017 3.6E-07 44.1 9.8 64 110-174 38-102 (106)
79 PRK11431 multidrug efflux syst 96.8 0.012 2.6E-07 45.2 9.0 64 267-330 38-103 (105)
80 PF06800 Sugar_transport: Suga 96.8 0.013 2.7E-07 52.8 10.5 113 209-333 8-126 (269)
81 PF07857 DUF1632: CEO family ( 96.8 0.0029 6.2E-08 56.6 6.2 130 184-333 1-138 (254)
82 PF05653 Mg_trans_NIPA: Magnes 96.8 0.013 2.7E-07 54.3 10.6 118 181-329 5-122 (300)
83 PRK09541 emrE multidrug efflux 96.8 0.025 5.4E-07 43.9 10.5 65 110-175 38-103 (110)
84 COG5006 rhtA Threonine/homoser 96.7 0.059 1.3E-06 47.5 13.3 118 54-174 163-281 (292)
85 KOG4510 Permease of the drug/m 96.5 0.0011 2.4E-08 58.4 1.2 70 262-331 102-171 (346)
86 KOG2234 Predicted UDP-galactos 96.2 0.32 6.8E-06 45.2 15.7 72 260-331 95-166 (345)
87 PF00893 Multi_Drug_Res: Small 96.1 0.024 5.2E-07 42.6 6.8 54 267-320 38-93 (93)
88 COG3238 Uncharacterized protei 95.5 0.83 1.8E-05 37.3 13.6 138 183-330 5-147 (150)
89 PF00893 Multi_Drug_Res: Small 95.5 0.073 1.6E-06 40.0 7.0 55 111-166 38-93 (93)
90 PF10639 UPF0546: Uncharacteri 95.3 0.087 1.9E-06 40.9 6.9 71 101-173 41-112 (113)
91 PF04657 DUF606: Protein of un 94.7 1.8 4E-05 35.0 14.1 115 56-172 18-138 (138)
92 COG4975 GlcU Putative glucose 94.7 0.02 4.3E-07 50.2 2.2 131 184-331 3-138 (288)
93 KOG2765 Predicted membrane pro 94.4 0.13 2.7E-06 48.0 6.7 72 262-333 164-235 (416)
94 TIGR00803 nst UDP-galactose tr 94.3 0.66 1.4E-05 40.8 11.2 59 113-172 163-221 (222)
95 PF06379 RhaT: L-rhamnose-prot 92.6 2.7 5.9E-05 39.1 12.3 143 182-335 6-159 (344)
96 KOG1581 UDP-galactose transpor 92.5 3.8 8.3E-05 37.4 12.8 130 42-172 175-310 (327)
97 PF10639 UPF0546: Uncharacteri 91.8 0.42 9.1E-06 37.1 5.1 53 274-326 58-111 (113)
98 KOG1444 Nucleotide-sugar trans 91.5 4.7 0.0001 37.1 12.3 139 183-331 12-151 (314)
99 KOG4314 Predicted carbohydrate 91.1 0.31 6.7E-06 41.3 4.1 62 270-331 66-127 (290)
100 KOG1580 UDP-galactose transpor 91.0 0.63 1.4E-05 40.7 5.9 71 264-334 91-162 (337)
101 KOG2922 Uncharacterized conser 89.5 0.27 5.8E-06 45.0 2.6 119 180-329 18-136 (335)
102 PF05297 Herpes_LMP1: Herpesvi 89.4 0.11 2.3E-06 46.4 0.0 89 132-221 53-144 (381)
103 KOG1441 Glucose-6-phosphate/ph 86.3 2.5 5.5E-05 39.2 6.9 120 53-175 177-307 (316)
104 COG5070 VRG4 Nucleotide-sugar 85.7 7.3 0.00016 34.0 8.8 122 45-168 161-289 (309)
105 COG3238 Uncharacterized protei 82.4 26 0.00056 28.7 12.7 117 55-174 21-145 (150)
106 PRK02237 hypothetical protein; 81.2 5.2 0.00011 30.5 5.5 47 285-331 61-107 (109)
107 COG3169 Uncharacterized protei 80.6 17 0.00036 27.2 7.8 63 265-327 42-113 (116)
108 PF02694 UPF0060: Uncharacteri 79.1 5.7 0.00012 30.3 5.1 46 286-331 60-105 (107)
109 PF08507 COPI_assoc: COPI asso 74.3 3.1 6.7E-05 33.6 2.9 33 294-327 71-103 (136)
110 PF04342 DUF486: Protein of un 73.9 4.7 0.0001 30.6 3.4 29 298-326 77-105 (108)
111 KOG3912 Predicted integral mem 73.9 8.3 0.00018 34.9 5.5 57 274-330 103-159 (372)
112 COG2271 UhpC Sugar phosphate p 72.7 51 0.0011 32.1 10.9 48 286-334 162-210 (448)
113 PF05297 Herpes_LMP1: Herpesvi 71.1 0.95 2E-05 40.6 -0.9 55 274-328 125-183 (381)
114 PF07168 Ureide_permease: Urei 68.9 0.3 6.4E-06 44.4 -4.5 67 257-328 72-145 (336)
115 COG1742 Uncharacterized conser 67.7 19 0.0004 27.3 5.4 43 289-331 64-106 (109)
116 PF01102 Glycophorin_A: Glycop 67.2 3.9 8.5E-05 32.2 1.9 7 316-322 76-82 (122)
117 KOG4831 Unnamed protein [Funct 65.8 12 0.00026 28.4 4.1 69 103-173 54-123 (125)
118 PRK06638 NADH:ubiquinone oxido 62.6 85 0.0018 27.1 9.5 24 299-322 134-157 (198)
119 KOG2766 Predicted membrane pro 60.8 2.6 5.7E-05 37.5 -0.1 66 265-330 86-151 (336)
120 KOG1582 UDP-galactose transpor 55.3 88 0.0019 28.4 8.3 78 99-177 257-334 (367)
121 PF06379 RhaT: L-rhamnose-prot 55.0 1.9E+02 0.0041 27.3 23.0 227 100-329 71-340 (344)
122 PF05961 Chordopox_A13L: Chord 51.9 9.6 0.00021 26.3 1.4 22 312-333 5-26 (68)
123 PF10754 DUF2569: Protein of u 48.7 1.5E+02 0.0031 24.2 8.3 68 139-206 67-144 (149)
124 PRK13108 prolipoprotein diacyl 45.9 93 0.002 30.7 7.8 22 309-330 254-275 (460)
125 COG4736 CcoQ Cbb3-type cytochr 44.1 22 0.00047 24.2 2.2 22 314-335 15-36 (60)
126 TIGR02865 spore_II_E stage II 43.8 4.3E+02 0.0092 28.1 15.5 43 130-173 12-54 (764)
127 PF07444 Ycf66_N: Ycf66 protei 41.1 24 0.00052 25.8 2.2 27 307-333 3-29 (84)
128 TIGR01167 LPXTG_anchor LPXTG-m 37.8 44 0.00096 19.3 2.7 21 308-328 9-29 (34)
129 KOG2322 N-methyl-D-aspartate r 36.8 3E+02 0.0066 24.4 12.5 15 213-227 193-207 (237)
130 COG3329 Predicted permease [Ge 35.2 2.8E+02 0.006 25.7 8.4 22 350-371 188-209 (372)
131 PF14150 YesK: YesK-like prote 34.4 1.8E+02 0.0039 21.1 9.5 39 199-238 16-54 (81)
132 PHA03049 IMV membrane protein; 34.3 38 0.00082 23.3 2.1 22 312-333 5-26 (68)
133 COG3086 RseC Positive regulato 34.1 61 0.0013 26.3 3.6 27 278-304 69-95 (150)
134 PF00909 Ammonium_transp: Ammo 33.9 4.4E+02 0.0096 25.4 14.5 24 262-285 356-379 (399)
135 PF02694 UPF0060: Uncharacteri 33.6 86 0.0019 24.0 4.2 37 139-176 68-104 (107)
136 PRK02237 hypothetical protein; 33.1 89 0.0019 24.0 4.2 36 139-175 70-105 (109)
137 TIGR00939 2a57 Equilibrative N 32.9 4.8E+02 0.01 25.5 10.8 16 313-328 178-193 (437)
138 KOG1443 Predicted integral mem 32.9 1.4E+02 0.0031 27.6 6.2 58 274-331 101-158 (349)
139 PF15102 TMEM154: TMEM154 prot 32.4 25 0.00055 28.5 1.3 24 314-337 66-89 (146)
140 COG3169 Uncharacterized protei 31.2 1.9E+02 0.0041 21.8 5.5 30 143-173 84-113 (116)
141 PF01306 LacY_symp: LacY proto 30.9 4.5E+02 0.0097 25.6 9.8 40 280-319 137-176 (412)
142 PF10225 DUF2215: Uncharacteri 30.0 4.1E+02 0.0089 23.8 10.6 43 276-318 114-156 (249)
143 COG1971 Predicted membrane pro 29.0 85 0.0018 26.8 3.9 43 283-325 40-83 (190)
144 PRK15432 autoinducer 2 ABC tra 28.4 1.2E+02 0.0026 28.7 5.3 23 309-331 286-308 (344)
145 cd01324 cbb3_Oxidase_CcoQ Cyto 27.6 57 0.0012 21.0 2.1 22 313-334 15-36 (48)
146 COG5336 Uncharacterized protei 26.9 1.3E+02 0.0029 23.1 4.2 37 293-330 55-94 (116)
147 PF04246 RseC_MucC: Positive r 26.0 74 0.0016 25.4 3.1 49 279-327 63-113 (135)
148 PF06946 Phage_holin_5: Phage 25.4 2.9E+02 0.0063 20.6 7.1 24 148-172 24-47 (93)
149 KOG1442 GDP-fucose transporter 24.0 9 0.00019 34.6 -2.8 55 274-328 119-173 (347)
150 TIGR02840 spore_YtaF putative 23.9 4.8E+02 0.01 22.6 8.1 46 281-326 31-78 (206)
151 PRK02463 OxaA-like protein pre 23.6 5.5E+02 0.012 23.9 8.6 38 288-326 209-246 (307)
152 KOG4831 Unnamed protein [Funct 22.9 84 0.0018 24.0 2.5 52 275-326 70-122 (125)
153 PF14851 FAM176: FAM176 family 22.6 52 0.0011 27.1 1.5 9 282-290 18-26 (153)
154 PRK10644 arginine:agmatin anti 22.6 6.8E+02 0.015 24.3 9.7 12 142-153 367-378 (445)
155 PF08693 SKG6: Transmembrane a 22.1 78 0.0017 19.6 1.8 17 315-331 21-37 (40)
156 PRK09765 PTS system 2-O-a-mann 21.1 9.4E+02 0.02 24.9 16.2 61 134-207 343-403 (631)
157 cd08764 Cyt_b561_CG1275_like N 21.1 5.7E+02 0.012 22.4 16.5 44 285-328 138-192 (214)
158 PF11022 DUF2611: Protein of u 21.1 87 0.0019 22.1 2.1 30 304-333 7-37 (71)
159 KOG1479 Nucleoside transporter 21.0 7.7E+02 0.017 23.9 12.8 18 312-329 185-202 (406)
160 PF06946 Phage_holin_5: Phage 20.6 3.7E+02 0.008 20.1 5.8 56 276-331 23-82 (93)
161 PF13038 DUF3899: Domain of un 20.5 82 0.0018 23.2 2.1 20 310-329 3-22 (92)
162 PF04342 DUF486: Protein of un 20.2 4.1E+02 0.0088 20.4 9.5 35 138-173 72-106 (108)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=3.4e-36 Score=283.62 Aligned_cols=292 Identities=20% Similarity=0.303 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc--hhhhHHHHHHHHHHHHHH
Q 017423 39 SVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE--LLTVWRFLPAAIIFYLSL 116 (372)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 116 (372)
+....++.++..|+..++.||++++.+|+|++++++|++++.+++.+.+..+.++.++++ +++++.+++.|+++....
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~ 128 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVH 128 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 666677777777788999999999999999999999999998776655554444444443 347889999999988777
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHH
Q 017423 117 FTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMT 196 (372)
Q Consensus 117 ~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a 196 (372)
...+.++++++++++++++++.|+++++++++++||| ++++++++++++++|+++++.++.++++.|++++++|+++++
T Consensus 129 ~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a 207 (350)
T PTZ00343 129 FGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSS 207 (350)
T ss_pred HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHH
Confidence 7778999999999999999999999999999999999 999999999999999999998888888899999999999999
Q ss_pred HHHHHHHHHhhccC-----CCchhHHHHHhHHHH-HHHHHHHHHhhh-HHHHHHh-hhcccccchhHHHHHHHHHHHHHH
Q 017423 197 IDFVYIKHVVMTIG-----LNTWGLVLYNNLEAL-LLFPLELLIMGE-LKKIKHE-MTTASDWYSFEVVLPVGLSCIFGL 268 (372)
Q Consensus 197 ~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 268 (372)
+|+++.|+.+++++ .++..+..|+.+.+. +++|.....++. ....+.. ......+.....+..++.+++..+
T Consensus 208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~ 287 (350)
T PTZ00343 208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY 287 (350)
T ss_pred HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence 99999999987643 455555555566664 445555433331 1111100 001111111223334566788888
Q ss_pred HHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 269 AISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 269 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..+.+.|.++++++|.+.++.+++||++++++|++++||++|+.+++|.+++++|+++|++.|
T Consensus 288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 888888899999999999999999999999999999999999999999999999999998753
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=2.3e-36 Score=280.57 Aligned_cols=293 Identities=18% Similarity=0.210 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423 40 VYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTN 119 (372)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (372)
..+.++.|+..|+.++++||++++.+++|.+++++|++++.+.+.+.+..+.+++++.++++++.+++.|+++.....++
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44667777788888999999999999999999999999988776655433334445677889999999999988889999
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHH
Q 017423 120 SELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDF 199 (372)
Q Consensus 120 ~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 199 (372)
|.+++|+++++++++++++|+++++++++++||| ++++++.+++++++|+++....+.+++..|+++++++++++++|.
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999998877677778889999999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHhHHHH-HHHHHHHHHhhhHHHHHHhhhcc-cccchhHHHHHHHHHHH-HHHHHHHHHHH
Q 017423 200 VYIKHVVMTIGLNTWGLVLYNNLEAL-LLFPLELLIMGELKKIKHEMTTA-SDWYSFEVVLPVGLSCI-FGLAISFFGFS 276 (372)
Q Consensus 200 i~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 276 (372)
++.||..++.+.++.++..|+...+. .++|..... ++........... ..+.....+...+..+. .....+..++.
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT-EGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987445788999999988775 444554333 3222111100000 00111112222333333 23334445678
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 277 CRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 277 ~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
+++++||++.+++++++|++++++|++++||++|+.+++|.+++++|+++|++.|.+|
T Consensus 241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK 298 (302)
T ss_pred HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999877443
No 3
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-36 Score=268.13 Aligned_cols=290 Identities=36% Similarity=0.573 Sum_probs=266.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHH--HHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAIMKFPYPGALTA--LQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTN 119 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~--~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (372)
...+.||.+|+.++++||++++.++||..+.. .|++++.+.+.++...+..+.++++++..|+++|..+++.++++++
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~ 94 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG 94 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence 66789999999999999999999999866655 9999999999999988999999999999999999999999999999
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHH
Q 017423 120 SELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDF 199 (372)
Q Consensus 120 ~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 199 (372)
..+++|+++++++++|+.+|+++++.+.+++|.+ +++..|.++..+.+|.......|.+++..|+.|++.++++.+.+.
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017423 200 VYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRR 279 (372)
Q Consensus 200 i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 279 (372)
++.||..+..+.+.+++++|+++.+++.++...+++||+++.. .+.+.|....++..+..+|+++++++|+.++|.+
T Consensus 174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~---~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~ 250 (314)
T KOG1444|consen 174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS---LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR 250 (314)
T ss_pred HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH---hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888899999999999999988888888899988332 3345677777888999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423 280 AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335 (372)
Q Consensus 280 ~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~ 335 (372)
..|+++.++++..+...+.+.+.+++|++.++.+.+|..+.+.|.++|++.+.+++
T Consensus 251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k 306 (314)
T KOG1444|consen 251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK 306 (314)
T ss_pred hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence 99999999999777777777777778899999999999999999999999885443
No 4
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=262.37 Aligned_cols=290 Identities=21% Similarity=0.366 Sum_probs=248.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccch-hhhHHHHHHHHHHHHH
Q 017423 39 SVYGVAAGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALEL-LTVWRFLPAAIIFYLS 115 (372)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 115 (372)
.....+..++++++...+.||++++ +|++|.+++..|.+++.+...+.+..+..+.++.+. ..++.++|+++.+.++
T Consensus 17 ~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~ 96 (316)
T KOG1441|consen 17 RIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCIS 96 (316)
T ss_pred HHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHH
Confidence 4445566777778889999999999 899999999999999999999988888777666543 4788999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHH
Q 017423 116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSM 195 (372)
Q Consensus 116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 195 (372)
..++|.++.++++++++++|+++|++++++++++.+|+ .++..+++++....|+++++..|.++++.|...++++.++.
T Consensus 97 ~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~-~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~ 175 (316)
T KOG1441|consen 97 HVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKT-YSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAF 175 (316)
T ss_pred HHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCC-CcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh--ccCCCchhHHHHHhHHHHH-HH-HHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 017423 196 TIDFVYIKHVVM--TIGLNTWGLVLYNNLEALL-LF-PLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAIS 271 (372)
Q Consensus 196 a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (372)
++++++.|++++ +++.++.++++|+.+.+.. ++ |.....+++.. . . .....|. ...+..+..+ ++++.+|
T Consensus 176 al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~--~~~~~~~-~~~~~~~~~s-v~~f~~N 249 (316)
T KOG1441|consen 176 ALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-G--FLTAPWF-VTFLILLLNS-VLAFLLN 249 (316)
T ss_pred HHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-e--eeccccc-hhhHHHHHHH-HHHHHHH
Confidence 999999999984 5678999999999998743 34 44444444322 1 0 0111232 2233333334 9999999
Q ss_pred HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423 272 FFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335 (372)
Q Consensus 272 ~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~ 335 (372)
.+.|++++++||.|.++.+.+|.++.++.|+++|++++|+.+..|+++.++|+++|++.|.+++
T Consensus 250 ls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 250 LSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999885543
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=4.5e-29 Score=234.45 Aligned_cols=281 Identities=9% Similarity=0.070 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-cCCchHHHHHHHHHHHHHHHHHHhhc-Cc-ccccccchhhhHHHHHHHHHHHHH
Q 017423 39 SVYGVAAGYCISASLLSIINKWAIM-KFPYPGALTALQYFTSAAGVLLCGYF-KF-LEHDALELLTVWRFLPAAIIFYLS 115 (372)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~K~~l~-~~~~p~~l~~~r~~~~~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 115 (372)
+.+...+..-.+...+....|.+++ +.+ |..+.++|+.++.++++.+.+. ++ ++.++.+++++..+...+++....
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~ 91 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMY 91 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHH
Confidence 4444333333344457778888885 566 8889999999888766554432 21 222334566667777777766434
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH------cCCCCCCHhHHHHHHHHhhhhhheee-ccc----------
Q 017423 116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLF------LHQPWPSIKTWLSLATIFGGSVIYVL-TDY---------- 178 (372)
Q Consensus 116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~------l~~~~~~~~~~~~~~~~~~Gv~l~~~-~~~---------- 178 (372)
..+.+.+++|++++.++++.++.|++++++++++ +||| .+++++.+++++++|++++.. ++.
T Consensus 92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-ccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 4567889999999999999999999999999988 5898 999999999999999987542 111
Q ss_pred -------------ccc-hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHH-HHHHHHHHHHHhhh-HHHHH
Q 017423 179 -------------QFT-VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLE-ALLLFPLELLIMGE-LKKIK 242 (372)
Q Consensus 179 -------------~~~-~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~-~~~~~ 242 (372)
..+ ..|+.++++++++|++|++++|+..++++. .....+++... ++++.++..+.+++ ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~- 248 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW- 248 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHHHHHccCCcccc-
Confidence 112 349999999999999999999999877432 22334444333 34333333332221 1100
Q ss_pred HhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Q 017423 243 HEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICM 321 (372)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil 321 (372)
...+ +.. ...++|.++++. ..|. +++++++.+|.+++++.+++|++++++|++++||++++.+++|.++|+
T Consensus 249 -----~~~~-~~~-~~~i~y~~i~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl 320 (358)
T PLN00411 249 -----IIHF-DIT-LITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT 320 (358)
T ss_pred -----eecc-chH-HHHHHHHHHHHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 0112 222 234667777654 4554 788999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhcccc
Q 017423 322 LGGVMYQQST 331 (372)
Q Consensus 322 ~g~~l~~~~~ 331 (372)
+|+++..+.+
T Consensus 321 ~Gv~l~~~~~ 330 (358)
T PLN00411 321 LGFYAVMWGK 330 (358)
T ss_pred HHHHHHHhhh
Confidence 9999988755
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=5.6e-29 Score=217.56 Aligned_cols=295 Identities=17% Similarity=0.212 Sum_probs=244.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhc-Cccc---ccccchh-hhHHHHHH
Q 017423 34 LAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYF-KFLE---HDALELL-TVWRFLPA 108 (372)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~-~~~~---~~~~~~~-~~~~~~~~ 108 (372)
.+++....+++..|+++|+...+++|+.-.+|++|.+++..|+++-..+....... +... +..++|+ ..|+..|.
T Consensus 11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt 90 (349)
T KOG1443|consen 11 LMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT 90 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence 45555777888888888999999999999999999999999998887766554432 2211 2246775 57788899
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHH
Q 017423 109 AIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWA 188 (372)
Q Consensus 109 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~ 188 (372)
++...+.+.++|++++|++.+++++.|+.+++|+.+++..+-=|| .++.-.+.++++.+|+++.++.+.+++..|+.++
T Consensus 91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk-~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv 169 (349)
T KOG1443|consen 91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEK-FRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV 169 (349)
T ss_pred hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence 999999999999999999999999999999999999995543365 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccC---CCchhHHHHHhHH-HHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHH
Q 017423 189 LAYLVSMTIDFVYIKHVVMTIG---LNTWGLVLYNNLE-ALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLS 263 (372)
Q Consensus 189 l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 263 (372)
+.++++.+++..+.|.++++.+ .+|.+.+++..+. ++.++|..++++|......+...+..+.. .......+...
T Consensus 170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~ 249 (349)
T KOG1443|consen 170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG 249 (349)
T ss_pred HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence 9999999999999999998754 5788888877664 56777888888886544433222222221 22334456678
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
|..++...++.+..+.+++..+.++++.++.+.+.+++..+.+|.++..+|+|..++..|+.++..
T Consensus 250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 888899998899999999999999999999999999999999999999999999999999999944
No 7
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.97 E-value=1.4e-29 Score=211.39 Aligned_cols=284 Identities=21% Similarity=0.390 Sum_probs=242.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017423 43 VAAGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120 (372)
Q Consensus 43 ~~~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (372)
.++.||++++.|++.||++++ +|+..+.+.+.|..+..+.++++.+.+..+. +.++.+.|+|.+++...+++.+.
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~S 86 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSS 86 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcc
Confidence 457899999999999999996 5666788889999888877777766554433 35688999999999999999999
Q ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccccc-------chHHHHHHHHHHH
Q 017423 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF-------TVMAYSWALAYLV 193 (372)
Q Consensus 121 ~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~-------~~~G~~~~l~a~~ 193 (372)
.+++|++++.+++.|+++.+.++..+.+++|.| .+..+..+.++++.......++|.+- -..|++|+..+++
T Consensus 87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~-vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Ncl 165 (309)
T COG5070 87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGR-VTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCL 165 (309)
T ss_pred cceeeeeeeHHHHhccceeehhHhhHHHHhcCc-cchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhH
Confidence 999999999999999999999999999999999 89999999999999999999888632 1259999999999
Q ss_pred HHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 017423 194 SMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF 273 (372)
Q Consensus 194 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (372)
+.+++....|+..+-.+...++.++|+++++++++....+.++|+++- +...-.+......+..+|++.+.+.|+
T Consensus 166 ssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-----n~annl~~d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 166 SSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-----NLANNLSVDSLMAMFISGLCSVGISYC 240 (309)
T ss_pred hHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-----hhhcCCChHHHHHHHHHHHHHhhhhhc
Confidence 999999999998876678889999999999987776666666665432 001111233455688999999999999
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~ 335 (372)
.-||++.++.++.++++.+++....+.|.++||++.+...+..+.+-..+.++|...+.+|+
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988775433
No 8
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=3.3e-27 Score=218.99 Aligned_cols=272 Identities=22% Similarity=0.311 Sum_probs=222.3
Q ss_pred HHHHHHHH-ccC--CchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423 55 SIINKWAI-MKF--PYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF 131 (372)
Q Consensus 55 ~~~~K~~l-~~~--~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 131 (372)
.+.++.+. ... ++|.++++.|+....+.......... .++.++..++++++.++++.++..++|.+++|+|.|+.
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~ 93 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQ 93 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 34444455 333 35999999999888876655444322 12224456788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccc----c------chHHHHHHHHHHHHHHHHHHH
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQ----F------TVMAYSWALAYLVSMTIDFVY 201 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~~~i~ 201 (372)
+++|++.|+++++++++++||| ++++++.++++.++|+++...+|.+ . ...|+++++++.++++++.++
T Consensus 94 ~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 94 IVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 9999999999999999998765421 1 123999999999999999999
Q ss_pred HHHHhhccCCCchhHHHHHhHHHHHHHHHHHHH--hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017423 202 IKHVVMTIGLNTWGLVLYNNLEALLLFPLELLI--MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRR 279 (372)
Q Consensus 202 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 279 (372)
++|+.++++.+++++++|+++.++++..+.... .+|+.+..+... . .+..+..++..++.+...+...+.+++
T Consensus 173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~----~-~p~~~~~l~~~s~~~~~g~~~i~~~~~ 247 (303)
T PF08449_consen 173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS----A-HPSVLLYLLLFSLTGALGQFFIFYLIK 247 (303)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH----H-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987776666555 566665543321 1 222455566677777777777778899
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 280 AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 280 ~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
+.||.+.+++.++++++++++|+++|++++++.+|+|+++++.|..+|.+.|+|+
T Consensus 248 ~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 248 KFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred hcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999988443
No 9
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.4e-30 Score=222.44 Aligned_cols=290 Identities=19% Similarity=0.267 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc----CCchHHHHHHHHHHHHHHHHHHhhc-----Cccccc--ccchhhhHHHHH
Q 017423 39 SVYGVAAGYCISASLLSIINKWAIMK----FPYPGALTALQYFTSAAGVLLCGYF-----KFLEHD--ALELLTVWRFLP 107 (372)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~K~~l~~----~~~p~~l~~~r~~~~~i~~~~~~~~-----~~~~~~--~~~~~~~~~~~~ 107 (372)
.+-..+..||.+++.+.+.||++++. .+.|.+.++.|+++...++..+... ++...+ +++.+..+++.|
T Consensus 28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlp 107 (347)
T KOG1442|consen 28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLP 107 (347)
T ss_pred chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcc
Confidence 44455688999999999999999974 5669999999999888777665432 222222 356678899999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHH
Q 017423 108 AAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMA 184 (372)
Q Consensus 108 ~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G 184 (372)
+++++.+++.++|.+|+|.+++++.+-|+++.+|++++.++++|+| .+....++++++++|..+-...+ ...++.|
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G 186 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG 186 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheeccccccccCccchhh
Confidence 9999999999999999999999999999999999999999999999 89899999999999988877655 4578899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHH
Q 017423 185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSC 264 (372)
Q Consensus 185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (372)
.+++..++++.|+-.++.||.....+...|.+.+|+++.+++++.+.+.+.||++.+.. +++..+..+|..+..+|
T Consensus 187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~----~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG----FPHLPAIKFWILMTLSG 262 (347)
T ss_pred hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC----cccchHHHHHHHHHHHH
Confidence 99999999999999999999988878889999999999998887788888999988843 33444667899999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423 265 IFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
++++.++|...+-+|.+||.|..+-++.|...-+++++.+++|..+..=|-|-++++.|...|.+.|++
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~ 331 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH 331 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988743
No 10
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=207.52 Aligned_cols=255 Identities=13% Similarity=0.049 Sum_probs=183.7
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhh----ccchh
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLL----HANVD 129 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~~~~~ 129 (372)
.....|..++.+| |..+.++|+.++.+++..+. +. ++.++++++.....++.+.....+.+.+++ ++++.
T Consensus 19 ~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~ 92 (295)
T PRK11689 19 MVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GF---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAI 92 (295)
T ss_pred HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cc---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccch
Confidence 4788999999999 99999999998887665432 11 111212223333333333333444455553 56788
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc-----------ccchHHHHHHHHHHHHHHHH
Q 017423 130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY-----------QFTVMAYSWALAYLVSMTID 198 (372)
Q Consensus 130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~-----------~~~~~G~~~~l~a~~~~a~~ 198 (372)
.+.++.++.|+++.+++++++||| ++++++.++++++.|++++..++. +.+..|+++++++++|||+|
T Consensus 93 ~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~ 171 (295)
T PRK11689 93 EVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAY 171 (295)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHH
Confidence 889999999999999999999998 999999999999999998765432 12346999999999999999
Q ss_pred HHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHH
Q 017423 199 FVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSC 277 (372)
Q Consensus 199 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 277 (372)
+++.||..++ .++.... ....++.+.+.. ...++.. ..+ +...|..+.+.++ .+...|. ++++
T Consensus 172 ~v~~k~~~~~--~~~~~~~--~~~~~~~l~~~~-~~~~~~~---------~~~-~~~~~~~l~~~~~-~t~~~~~l~~~a 235 (295)
T PRK11689 172 CNVTRKYARG--KNGITLF--FILTALALWIKY-FLSPQPA---------MVF-SLPAIIKLLLAAA-AMGFGYAAWNVG 235 (295)
T ss_pred HHHHhhccCC--CCchhHH--HHHHHHHHHHHH-HHhcCcc---------ccC-CHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999998655 3444332 222222222222 2222110 112 2234555667675 4555665 7899
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 278 RRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 278 i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
+|+.+|.+.+.+.+++|++++++|++++||++++.+++|+++|+.|+++....+
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 999999999999999999999999999999999999999999999998776544
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=4e-25 Score=204.10 Aligned_cols=260 Identities=13% Similarity=0.109 Sum_probs=198.2
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHH-HHHHHHHHhh-hccchhHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFY-LSLFTNSELL-LHANVDTF 131 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al-~~~~~~~~ 131 (372)
.....|...++.+ |..++++|++++.++++.....+.++ ..++++++.....|.+.. ....+.+.+. ++++++.+
T Consensus 23 ~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a 99 (292)
T PRK11272 23 TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA 99 (292)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 5788899998888 99999999998887765544332222 224456666666666543 3355666777 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeec-ccccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLT-DYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG 210 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~ 210 (372)
+++.++.|+++++++.+ +||| ++++++.+++++++|+.+...+ +.+.+..|++++++++++||.|.++.||..++
T Consensus 100 ~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-- 175 (292)
T PRK11272 100 AVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-- 175 (292)
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--
Confidence 99999999999999975 6988 9999999999999999887543 33455679999999999999999999997533
Q ss_pred CCchhHHHHHhHHH-HHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHH
Q 017423 211 LNTWGLVLYNNLEA-LLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTV 288 (372)
Q Consensus 211 ~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~ 288 (372)
++.....++...+ ..+.+... ..++.. ....+...|..+++.+++++...+. +++++++.++.+.++
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 176 -VGMMAGAAEMLAAGVVLLIASL-LSGERL---------TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred -cchHHHHHHHHHHHHHHHHHHH-HcCCcc---------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 2233444555444 33333322 222100 0111234566788889998888886 778999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 289 LGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 289 ~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
+.+++|+++.++|++++||++++.+++|.++++.|+++.++.+
T Consensus 245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887654
No 12
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=7.2e-25 Score=202.47 Aligned_cols=256 Identities=10% Similarity=0.024 Sum_probs=191.9
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV 133 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i 133 (372)
.....|+.++.++ |..+.++|++++.++++.....+ .++.++++++.....|+.......+.+.+++|+|++.+++
T Consensus 27 ~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~ 102 (293)
T PRK10532 27 GASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA 102 (293)
T ss_pred hHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 4668999999888 99999999999987665543221 1233556777777777776666777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423 134 FRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG 210 (372)
Q Consensus 134 i~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~ 210 (372)
+..+.|+++++++ +|| +.+ ...+.+++.|+.++...+ .+.+..|++++++++++|++|.++.||..++
T Consensus 103 l~~t~Pi~~~ll~----~~~-~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~-- 173 (293)
T PRK10532 103 LEFTGPLAVALFS----SRR-PVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE-- 173 (293)
T ss_pred HHHHHHHHHHHHh----cCC-hHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 9999999999776 354 433 445677789988765322 2345679999999999999999999998765
Q ss_pred CCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHH
Q 017423 211 LNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVL 289 (372)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~ 289 (372)
.++....++....++++.|... ..+. . ..+ +...|..+++.|++++.++|. +++++++.++.+.+++
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~-~~~~--~--------~~~-~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~ 241 (293)
T PRK10532 174 HGPATVAIGSLIAALIFVPIGA-LQAG--E--------ALW-HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL 241 (293)
T ss_pred CCchHHHHHHHHHHHHHHHHHH-HccC--c--------ccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence 4455444333333333333332 2111 0 011 223455567899999999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 290 GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 290 ~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
.+++|++++++|++++||++++.+++|.++++.|++.+.+..+++
T Consensus 242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~ 286 (293)
T PRK10532 242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE 286 (293)
T ss_pred HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999987665443
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=1.1e-24 Score=201.91 Aligned_cols=263 Identities=11% Similarity=0.117 Sum_probs=190.7
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHH-HHHHHHHhhhc-cchhHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYL-SLFTNSELLLH-ANVDTF 131 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~-~~~~~~ 131 (372)
.....|..+++++ |..+.++|+.++.+.++.... + + +.+ ++.....++.... ...+.+.+++| .+++.+
T Consensus 19 ~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~-~-~---~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a 89 (299)
T PRK11453 19 NFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA-R-P---KVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLA 89 (299)
T ss_pred hHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc-C-C---CCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 4678899998888 999999999887654433221 1 1 112 2233334443322 23345667777 688999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMT 208 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 208 (372)
.++.++.|+++.+++++++||| ++++++++++++++|+.++..++ .+.+..|+++++.++++|++|.+++||..++
T Consensus 90 ~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~ 168 (299)
T PRK11453 90 SLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSH 168 (299)
T ss_pred HHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998 99999999999999999876542 2234579999999999999999999998654
Q ss_pred cC-CCchhHHHHHhHHHH-HHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhH
Q 017423 209 IG-LNTWGLVLYNNLEAL-LLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATG 285 (372)
Q Consensus 209 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~ 285 (372)
.+ ........++...+. ++.......+++.. ... +...+ +...|..+++.+++++..+|. +++++++.++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~ 243 (299)
T PRK11453 169 STRPAVMSLVVWSALIPIIPFFVASLILDGSAT-MIH---SLVTI-DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR 243 (299)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHhcCchh-hhh---hhccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 32 112222333333322 12222222222211 100 00112 334577889999999999997 678899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.+.+.+++|++++++|++++||++++.+++|.++++.|+++..+.+
T Consensus 244 ~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999999999999999999999876655
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=2.2e-24 Score=196.01 Aligned_cols=254 Identities=12% Similarity=0.059 Sum_probs=195.6
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHH-HHHHHHHHHHhhhccchhHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAII-FYLSLFTNSELLLHANVDTFI 132 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~ 132 (372)
..+..|+.+++...|..+.++|++++.+++......+ .++++++.....+.+ ......+.+.+++|++++.++
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 3577899987655488999999988877665544332 133455555555554 445577788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017423 133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGL 211 (372)
Q Consensus 133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~ 211 (372)
++.++.|+++++++.+++||| ++++++.++++++.|+.++...+ .+.+..|+.++++++++|+.+.++.|+..++.+.
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~-~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~ 156 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKER-PRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence 999999999999999999998 99999999999999998875443 4456689999999999999999999999876444
Q ss_pred CchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHH
Q 017423 212 NTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLG 290 (372)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~ 290 (372)
++.....+....+.++..+..+..++. ..+ +...|..+.+.+++++..++. +++++++.++.+.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~ 225 (260)
T TIGR00950 157 ELLQFTGWVLLLGALLLLPFAWFLGPN----------PQA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA 225 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC----------CCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 444444344545433333332222221 011 223455677888888877776 77899999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhh
Q 017423 291 IVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGV 325 (372)
Q Consensus 291 ~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~ 325 (372)
+++|+++++++++++||+++..+++|.++++.|+.
T Consensus 226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999863
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=6.9e-23 Score=189.53 Aligned_cols=259 Identities=8% Similarity=-0.025 Sum_probs=174.9
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCccccc---cc-chhhhHHHHHHHHHHHHHHHHHHHhhhccchh
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHD---AL-ELLTVWRFLPAAIIFYLSLFTNSELLLHANVD 129 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 129 (372)
.....|.. .+++ |..+.++|++++.+.++.....+.+... .. +++++......++.......+.+.+++++|++
T Consensus 23 ~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 100 (296)
T PRK15430 23 APAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHML 100 (296)
T ss_pred HHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 45666875 5677 9999999999988755544332211110 01 22222222233334445578889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017423 130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTI 209 (372)
Q Consensus 130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~ 209 (372)
.++++.++.|+++++++++++||| ++++++.++++++.|++++...+.+. ..++++++++|++|.++.||..++.
T Consensus 101 ~a~~l~~~~Pi~v~l~~~~~l~E~-~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~ 175 (296)
T PRK15430 101 EASLGYFINPLVNIVLGMIFLGER-FRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEA 175 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999 99999999999999999875432222 2467889999999999999864321
Q ss_pred CCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 017423 210 GLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVL 289 (372)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~ 289 (372)
..+......++.+.+.+.. ........ .. ........+..+.+.++.+.+..+++++++++.+|.+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~-~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~ 245 (296)
T PRK15430 176 QTGMLIETMWLLPVAAIYL--FAIADSST-------SH-MGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFF 245 (296)
T ss_pred chhHHHHHHHHHHHHHHHH--HHHccCCc-------cc-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 1112222223332222110 00000000 00 01111112333444565544444457889999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 290 GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 290 ~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
.+++|++++++|++++||++++.+++|+++++.|+.+...
T Consensus 246 ~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 246 QYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888776543
No 16
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.91 E-value=9.1e-22 Score=181.34 Aligned_cols=277 Identities=16% Similarity=0.166 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-ccCCchHHHHHHHHHHHHHHHHHHhhcCcc--cccccchhhhHHHHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAI-MKFPYPGALTALQYFTSAAGVLLCGYFKFL--EHDALELLTVWRFLPAAIIFYLSLFT 118 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l-~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (372)
+-++..+.++. ...+...- .+.+.|.+-++..++.-.+........+.. +..+..++++++.+.++++-+.+.++
T Consensus 18 gQ~lsl~~~~t--~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~ 95 (334)
T PF06027_consen 18 GQVLSLCITGT--GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYL 95 (334)
T ss_pred HHHHHHHHHhH--HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHH
Confidence 33444444442 33334333 467778877777765443332222222211 11222346777888889888888999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------ccchHHHHHHH
Q 017423 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY---------QFTVMAYSWAL 189 (372)
Q Consensus 119 ~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l 189 (372)
.+.|++|++++.++++..++.+++++++++++|+| +++.++.|++++++|++++...|. +....|+++++
T Consensus 96 ~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r-y~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l 174 (334)
T PF06027_consen 96 VVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR-YSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLAL 174 (334)
T ss_pred HHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHH
Confidence 99999999999999999999999999999999999 999999999999999998876652 23468999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 017423 190 AYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLA 269 (372)
Q Consensus 190 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (372)
+++++||+++++++++.++ .+..+......+.+.++..+...+ -|..++.+ .+|... .+..++ ...+...
T Consensus 175 ~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~i-le~~~i~~-----~~w~~~-~~~~~v-~~~~~lf 244 (334)
T PF06027_consen 175 LGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAI-LERSGIES-----IHWTSQ-VIGLLV-GYALCLF 244 (334)
T ss_pred HHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHh-eehhhhhc-----cCCChh-hHHHHH-HHHHHHH
Confidence 9999999999999999877 445555555555554433333222 23333321 234332 222211 1222223
Q ss_pred HHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 270 ISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 270 ~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..|+ .-..++..||+..++-.....+.++++++++||+++++..++|.++|+.|.++|...+
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 3333 3456899999999988888899999999999999999999999999999999999766
No 17
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.5e-20 Score=165.13 Aligned_cols=262 Identities=15% Similarity=0.102 Sum_probs=213.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 017423 64 KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA 143 (372)
Q Consensus 64 ~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~ 143 (372)
.|.+|.++.+.|-+.+.+........ .+.+....+.+++....++....+-.+++.||+|++.++..+.|++.-+.|+
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKW--WKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhc--ccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 36679999999998888766333222 2222233456778888888888889999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCch
Q 017423 144 IGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY---------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTW 214 (372)
Q Consensus 144 ~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~ 214 (372)
+++.++.|+| ++.++++...++.+|+.+....+. ..+..|+.++..+.+..++-+..|+++.++++.+.+
T Consensus 125 lmg~Lvy~~k-y~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~ 203 (327)
T KOG1581|consen 125 LMGTLVYGRK-YSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSL 203 (327)
T ss_pred HHHHHHhcCc-cCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHh
Confidence 9999999998 999999999999999998765421 245789999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 017423 215 GLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNK 294 (372)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~ 294 (372)
++++|.++.+.+......+..|.+.+..+.. .. ++..+.-+...++++.+.+.+.|..+++.|+.+...++..++
T Consensus 204 ~mM~~vNLf~~i~~~~~li~qg~~~~av~F~----~~-hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk 278 (327)
T KOG1581|consen 204 HMMFGVNLFSAILNGTYLILQGHLLPAVSFI----KE-HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRK 278 (327)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCchHHHHH----Hc-ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHH
Confidence 9999999988777777766556544443221 11 122344455556677777777788899999999999999999
Q ss_pred HHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423 295 LLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 295 v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
++++.++.+.|++++++.||+|..++++|+.+-...+.+
T Consensus 279 ~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 279 MVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999887766533
No 18
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=5.2e-22 Score=167.54 Aligned_cols=258 Identities=14% Similarity=0.144 Sum_probs=213.7
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 017423 64 KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA 143 (372)
Q Consensus 64 ~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~ 143 (372)
.|.+...+++.|+.+..+..-++... ++..+.|..+.+.....++.+.+.+..+|.|++|+|.++..+-+++.|+.++
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM 126 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM 126 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence 36678889999999888766444432 2333455555677788888999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhH
Q 017423 144 IGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY-------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGL 216 (372)
Q Consensus 144 ~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~ 216 (372)
++++++.|++ ++|+++..+++++.||++.-+.+. .....|-++.+++.-..++-...++|+.+.+..+...+
T Consensus 127 ilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~M 205 (337)
T KOG1580|consen 127 ILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSM 205 (337)
T ss_pred eeehhhhccc-ccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhh
Confidence 9999988888 999999999999999999876532 22346889999999999999999999987777788889
Q ss_pred HHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 017423 217 VLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLL 296 (372)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~ 296 (372)
++|.++-+.+.+...++++||..+....... .+..|.-+...++.+.+.+++.|..+...||.+-|++.+.++.+
T Consensus 206 M~~~NlwStL~Lg~g~lfTGElweF~yF~~R-----hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF 280 (337)
T KOG1580|consen 206 MFYTNLWSTLYLGAGLLFTGELWEFFYFVQR-----HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF 280 (337)
T ss_pred HHHHHHHHHHHhhhhheehhhHHHHHHHHHh-----ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence 9999998988888888899987776543221 22334455666777777788888889999999999999999999
Q ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 297 TVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 297 ~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+++.|+++|+++++..||+|.++++.|..+=..
T Consensus 281 Til~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 281 TILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 999999999999999999999999999876443
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.88 E-value=3e-20 Score=170.70 Aligned_cols=257 Identities=18% Similarity=0.173 Sum_probs=172.7
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcC--cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFK--FLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF 131 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 131 (372)
.....|...++-+ +. ++++...+.+++......+ ..+.++.+++.+......++.......+.+.++++.+++.+
T Consensus 16 ~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 92 (281)
T TIGR03340 16 WNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLV 92 (281)
T ss_pred HHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 5677786655423 32 3555544444443332221 11112222233333343444455557778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-cccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG 210 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~ 210 (372)
+.+.++.|+++++++++++||| ++++++.++++++.|+.++...+ .+.+..|+.++++++++|++|.++.|+..++.
T Consensus 93 ~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~- 170 (281)
T TIGR03340 93 YPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGV- 170 (281)
T ss_pred hhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccch-
Confidence 9999999999999999999999 99999999999999998776543 23455788999999999999999988764332
Q ss_pred CCch-hHHHHHhHHHHHH-HHHHHHH--hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhH
Q 017423 211 LNTW-GLVLYNNLEALLL-FPLELLI--MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATG 285 (372)
Q Consensus 211 ~~~~-~~~~~~~~~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~ 285 (372)
++. ....+.....+.. .|..... .++. . ....+. .+..+++.+.+.+.++|. +++++++.++.+
T Consensus 171 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 171 -PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-S--------MFPYAR-QILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred -hcccccHHHHHHHHHHHHHHHHHHHHHHhcc-c--------hhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 221 1122221111111 1222111 1110 0 001111 233445666666666665 778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423 286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l 326 (372)
.+.+.+++|++++++|++++||+++..+++|.++++.|+++
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999875
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=9.4e-18 Score=154.49 Aligned_cols=261 Identities=15% Similarity=0.125 Sum_probs=184.8
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV 133 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i 133 (372)
.....|........+....+.|...+.+........+..+..+..++.++..+..++.......+.+.++++++++.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (292)
T COG0697 22 SFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASL 101 (292)
T ss_pred HHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 45555666655332566666798888766332232221111111111123333344444555777888899999999999
Q ss_pred HHHHHHHHHHHHHH-HHcCCCCCCHhHHHHHHHHhhhhhheeecccccc---hHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017423 134 FRSAVPIFVAIGET-LFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT---VMAYSWALAYLVSMTIDFVYIKHVVMTI 209 (372)
Q Consensus 134 i~~~~pi~v~~~~~-l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~i~~k~~~~~~ 209 (372)
+.++.|+++.+++. +++||| .+++++.++++++.|+.++...+...+ ..|+.+++.++++++++.+..|+.. +
T Consensus 102 l~~~~p~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~- 178 (292)
T COG0697 102 IIGLLPLFTALLAVLLLLGER-LSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R- 178 (292)
T ss_pred HHHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-
Confidence 99999999999996 666998 999999999999999999988765433 5899999999999999999999987 3
Q ss_pred CCCchhHHH-HHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHH
Q 017423 210 GLNTWGLVL-YNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFT 287 (372)
Q Consensus 210 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s 287 (372)
.++..... +... .......... ..+. + .......+..+.+.++++..+.+. +++++++.++...+
T Consensus 179 -~~~~~~~~~~~~~-~~~~~~~~~~-~~~~--------~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 179 -LGPVTLALLLQLL-LALLLLLLFF-LSGF--------G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred -CChHHHHHHHHHH-HHHHHHHHHH-hccc--------c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 34444443 2322 1111111111 1110 0 011223455677788888865555 77899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423 288 VLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 288 ~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
.+.+++|+.++++++++++|+++..+++|.++++.|+++....
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999988765
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.84 E-value=3.2e-18 Score=155.20 Aligned_cols=229 Identities=11% Similarity=0.094 Sum_probs=155.1
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHh-hcCcccc--cc---cchhh-hHHHHHHHHHHHHHHHHHHHhhhcc
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCG-YFKFLEH--DA---LELLT-VWRFLPAAIIFYLSLFTNSELLLHA 126 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~-~~~~~~~--~~---~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~ 126 (372)
..+..|. +.+.+ |..++++|++++.++++... ..++++. ++ .++++ +......+++......+.+.+++++
T Consensus 17 ~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~ 94 (256)
T TIGR00688 17 MYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG 94 (256)
T ss_pred HHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4678897 56677 99999999998886654433 2222111 11 11222 2234445655666678889999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 017423 127 NVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVV 206 (372)
Q Consensus 127 ~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~ 206 (372)
+++.++++.++.|+++++++++++||| ++++++++++++++|++++..++.+.+ .+++++++||+.|.+..|+..
T Consensus 95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek-~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~ 169 (256)
T TIGR00688 95 SSLEVSLGYLINPLVMVALGRVFLKER-ISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALK 169 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999 999999999999999997654322111 357889999999999999874
Q ss_pred hccCCCchhHHHHHhHHHHHHHHHHHH--HhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccch
Q 017423 207 MTIGLNTWGLVLYNNLEALLLFPLELL--IMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISA 283 (372)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a 283 (372)
++ + ..+...+.. . ..|.... ...++.. ...+.....|..+.+.|+++. +.|. +++++|+.++
T Consensus 170 ~~-~--~~~~~~~~~-~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~g~~t~-i~~~l~~~a~~~~~a 234 (256)
T TIGR00688 170 NT-D--LAGFCLETL-S---LMPVAIYYLLQTDFAT-------VQQTNPFPIWLLLVLAGLITG-TPLLAFVIAANRLPL 234 (256)
T ss_pred CC-C--cchHHHHHH-H---HHHHHHHHHHHhccCc-------ccccCchhHHHHHHHHHHHHH-HHHHHHHHHHHcCCh
Confidence 32 2 222222111 1 1122211 1111100 001111123556667777744 4554 7889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 017423 284 TGFTVLGIVNKLLTVVINLVI 304 (372)
Q Consensus 284 ~~~s~~~~l~~v~~~~ls~~~ 304 (372)
.+.+++.|++|++++++|.++
T Consensus 235 ~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 235 NLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999764
No 22
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=5.4e-19 Score=152.40 Aligned_cols=271 Identities=13% Similarity=0.092 Sum_probs=210.0
Q ss_pred HHHHHHHHHHc--cCC-chHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchh
Q 017423 53 LLSIINKWAIM--KFP-YPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVD 129 (372)
Q Consensus 53 ~~~~~~K~~l~--~~~-~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 129 (372)
.+..+..++.+ +|+ +.|.+++.|+++-..+.++-...-..+++.. ++|....++.+..+.+.+++.++.|++.+
T Consensus 57 ~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~i---P~rtY~~la~~t~gtmGLsn~SlgYLNYP 133 (367)
T KOG1582|consen 57 VYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVI---PWRTYVILAFLTVGTMGLSNGSLGYLNYP 133 (367)
T ss_pred HHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceec---chhHhhhhHhhhhhccccCcCccccccCc
Confidence 34556666664 565 5799999998765433322111111111222 45666677777777899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc----cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 017423 130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD----YQFTVMAYSWALAYLVSMTIDFVYIKHV 205 (372)
Q Consensus 130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~----~~~~~~G~~~~l~a~~~~a~~~i~~k~~ 205 (372)
...+.|.+.-+.+++.+.++-|+| +++..+.+..++.+|.+..+..| +.|+..|+.+..++.++.|+-.-.|++.
T Consensus 134 tQviFKccKliPVmiggifIqGkR-Y~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~ 212 (367)
T KOG1582|consen 134 TQVIFKCCKLIPVMIGGIFIQGKR-YGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKA 212 (367)
T ss_pred HHHHHHhhhhhhhhheeeeecccc-ccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999999999999999998 99999999999999999888766 4678899999999999999999999999
Q ss_pred hhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 017423 206 VMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATG 285 (372)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~ 285 (372)
++..+.+..++.+|...++.+.+.+.+..+||+.+.+..... ++.........-...+++...+..-.++..||.+
T Consensus 213 m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcae----hp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~ 288 (367)
T KOG1582|consen 213 MKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAE----HPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALI 288 (367)
T ss_pred HhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHh----CcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhH
Confidence 988888888899998888877777777788987776544321 1111122222333334443333445689999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
+..+.+.++.+++++|.++|..|+|....-|..+++.|+++-.+.|
T Consensus 289 aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 289 AATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999999987776
No 23
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-17 Score=143.14 Aligned_cols=250 Identities=12% Similarity=0.051 Sum_probs=193.7
Q ss_pred HHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 017423 57 INKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRS 136 (372)
Q Consensus 57 ~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~ 136 (372)
..|....... |.-.+++|..++.++++.++...+ +++++++++.....|+....+..+.+.+++.+|.+.+..+.+
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 3466665555 889999999888877766654332 345678888999999988888888999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 017423 137 AVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNT 213 (372)
Q Consensus 137 ~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~ 213 (372)
+.|+.+.+++ .|| .+...-+.+.+.|+.+..... .+.|..|..+.+.+..||+.|.+..||.-+. .+.
T Consensus 106 ~GPL~vA~~~----sRr---~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g 176 (292)
T COG5006 106 TGPLAVALLS----SRR---LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHG 176 (292)
T ss_pred ccHHHHHHHh----ccc---hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCC
Confidence 9999888555 444 356666777888877665433 4578899999999999999999999998643 333
Q ss_pred hhHHHHHhH-HHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHHH
Q 017423 214 WGLVLYNNL-EALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLGI 291 (372)
Q Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~ 291 (372)
.+-..+... .+++.+|+.....+ +...++.....-+..+++++.+.|+ ...++++.++.++++...
T Consensus 177 ~~g~a~gm~vAaviv~Pig~~~ag------------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS 244 (292)
T COG5006 177 TAGVAVGMLVAALIVLPIGAAQAG------------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS 244 (292)
T ss_pred chHHHHHHHHHHHHHhhhhhhhcc------------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence 333333333 34555565543222 1233444555667789999999998 788999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 292 VNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 292 l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
++|.++.+.|++++||.+|+.||+|++.++.++.-.....
T Consensus 245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999999988666555
No 24
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.1e-18 Score=148.25 Aligned_cols=279 Identities=14% Similarity=0.155 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHh-hcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCG-YFKFLEHDALELLTVWRFLPAAIIFYLSLFTN 119 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (372)
..+..-|+++ .+.-..+.+..|- -..+|+.|+++-++--++.. -+...+ +++ ..|.++.....++....++
T Consensus 9 ~~vf~GCcsn---vv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k-~ki---plk~Y~i~V~mFF~vnv~N 81 (330)
T KOG1583|consen 9 SLVFGGCCSN---VVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVK-PKI---PLKDYAITVAMFFIVNVTN 81 (330)
T ss_pred HHHHHhhhch---HHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccC-CCC---chhhhheehheeeeeeeec
Confidence 3344444444 3344445554443 47889999864443222211 111111 223 3444555555666667789
Q ss_pred HHhhhc-cchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cc--------------cc
Q 017423 120 SELLLH-ANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQ--------------FT 181 (372)
Q Consensus 120 ~~al~~-~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~--------------~~ 181 (372)
|.++++ ++.+...++|+.+++..+++++++.|+| ++.+++.++++..+|+++.+..+ .+ +.
T Consensus 82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~-Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~ 160 (330)
T KOG1583|consen 82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKR-YSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF 160 (330)
T ss_pred cceeeecccceEEEEEecCcHHHHHHHHHHhccce-eehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence 999988 8999999999999999999999999998 99999999999999999886531 10 01
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhccc-------ccc
Q 017423 182 --VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTAS-------DWY 252 (372)
Q Consensus 182 --~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~ 252 (372)
..|+.+...+.+..|.-.++++...++++-++-+.++|+.++++ |..++...|+.+.+......+ ...
T Consensus 161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL---P~Flf~~~div~~~~~~~~se~~~~p~~g~~ 237 (330)
T KOG1583|consen 161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL---PLFLFMGDDIVSHWRLAFKSESYLIPLLGFK 237 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc---chHHHhcchHHHHHHHHhcCcceeccccCcc
Confidence 25999999999999999999999999999999999999998885 555444445443332211110 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 253 SFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
-+..|..++...+.-++.--..|.+-.++++.|++++-++++.++.++|.++|++++|+++|+|.++++.|.++|+...
T Consensus 238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1222333333332222222223444568999999999999999999999999999999999999999999999998655
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.74 E-value=3e-15 Score=137.85 Aligned_cols=249 Identities=11% Similarity=0.066 Sum_probs=172.3
Q ss_pred HHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc-hhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423 55 SIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE-LLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV 133 (372)
Q Consensus 55 ~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i 133 (372)
.+..|... +++.+.. . |+.++.+++....... ++ ++.+ ++.+..-+..|+....+..+.+.+.++++++.+..
T Consensus 17 g~~~k~~~-g~~~~~~-~--~~~~g~l~~~~~~~~~-~~-~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~ 90 (290)
T TIGR00776 17 VLINVKIG-GGPYSQT-L--GTTFGALILSIAIAIF-VL-PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMP 90 (290)
T ss_pred HHHHhccC-CCHHHHH-H--HHHHHHHHHHHHHHHH-hC-CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhH
Confidence 45556555 5553333 2 6766666554433221 11 1111 22222233334445555678889999999999988
Q ss_pred HHH-HHHHHHHHHHHHHcCCCCCCHhH----HHHHHHHhhhhhheeecccc-------cc-hHHHHHHHHHHHHHHHHHH
Q 017423 134 FRS-AVPIFVAIGETLFLHQPWPSIKT----WLSLATIFGGSVIYVLTDYQ-------FT-VMAYSWALAYLVSMTIDFV 200 (372)
Q Consensus 134 i~~-~~pi~v~~~~~l~l~~~~~~~~~----~~~~~~~~~Gv~l~~~~~~~-------~~-~~G~~~~l~a~~~~a~~~i 200 (372)
+.+ +.++++.+++.+++||+ .++++ ++++++.+.|+.+....+.+ .+ ..|+++++++.++|+.|.+
T Consensus 91 i~~~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~ 169 (290)
T TIGR00776 91 ISTGFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVV 169 (290)
T ss_pred HHHHHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 888 88889999999999999 78888 99999999999988664321 23 5799999999999999999
Q ss_pred HHHHHhhccCCCchhHHHHHhH----HHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HH
Q 017423 201 YIKHVVMTIGLNTWGLVLYNNL----EALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GF 275 (372)
Q Consensus 201 ~~k~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 275 (372)
..|+. +.++++..+.+.. .+.++.++. . + . ..+.....+..++ .|++. .+++. ++
T Consensus 170 ~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-----~-----~~~~~~~~~~~~~-~Gi~~-~ia~~~y~ 229 (290)
T TIGR00776 170 VAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-I---L-----A-----KPLKKYAILLNIL-PGLMW-GIGNFFYL 229 (290)
T ss_pred HHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-h---c-----c-----cchHHHHHHHHHH-HHHHH-HHHHHHHH
Confidence 99975 2566666444432 222222221 0 0 0 0111222333344 78884 55555 55
Q ss_pred HHhc-ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhccc
Q 017423 276 SCRR-AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQS 330 (372)
Q Consensus 276 ~~i~-~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~ 330 (372)
...+ +.++.+.++..+++|+.+++++++++||+.+..++ +|.++++.|+.+....
T Consensus 230 ~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 230 FSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 7788 99999999999999999999999999999999999 9999999999876543
No 26
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.74 E-value=6.5e-19 Score=151.69 Aligned_cols=273 Identities=11% Similarity=0.070 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccch-hhhHHHHHHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALEL-LTVWRFLPAAIIFYLSLFTNS 120 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 120 (372)
+..+.|++.+ .+.+..|... .+ |..+.-.|+++-.+....+....+.. -+.. ...+.++..|+.+..++...+
T Consensus 42 l~~vs~ff~~-~~vv~t~~~e--~~-p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~LiLRg~mG~tgvmlmy 115 (346)
T KOG4510|consen 42 LLTVSYFFNS-CMVVSTKVLE--ND-PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWLILRGFMGFTGVMLMY 115 (346)
T ss_pred ehhhHHHHhh-HHHhhhhhhc--cC-hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEEEeehhhhhhHHHHHH
Confidence 3344555544 4666666544 33 66666666544444333333332221 1111 223334556788888888999
Q ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-----c---------ccchHHHH
Q 017423 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-----Y---------QFTVMAYS 186 (372)
Q Consensus 121 ~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-----~---------~~~~~G~~ 186 (372)
++++|++.+-+.++..++|.++.++++.++||+ .+..+.++..+.+.||+++.... . +.+..|.+
T Consensus 116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~-~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~ 194 (346)
T KOG4510|consen 116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEP-FTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV 194 (346)
T ss_pred HHHhhcchhheEEEEecChHHHHHHHHHHHcCC-CcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence 999999999999999999999999999999999 89999999999999999886431 1 23456888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHH
Q 017423 187 WALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIF 266 (372)
Q Consensus 187 ~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (372)
.++.+++.-|.-.+..|++-|+ .+......|..+++++...+....-|+++ .+ ..+. -|..++..|++
T Consensus 195 aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~----lP---~cgk---dr~l~~~lGvf 262 (346)
T KOG4510|consen 195 AAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQ----LP---HCGK---DRWLFVNLGVF 262 (346)
T ss_pred HHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcccee----cC---cccc---ceEEEEEehhh
Confidence 8888888887777888887665 44444444555444332222222223221 11 1122 23345667888
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423 267 GLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 267 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
++..+......+++--|...++..+.+-+++.++.+++|||.+|++.|.|+++++.+.++....|..
T Consensus 263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA 329 (346)
T ss_pred hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence 8888887777777777777799999999999999999999999999999999999998887766533
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.72 E-value=3.1e-16 Score=130.77 Aligned_cols=146 Identities=16% Similarity=0.285 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-----cCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhccc-ccc-hhHH
Q 017423 184 AYSWALAYLVSMTIDFVYIKHVVMT-----IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTAS-DWY-SFEV 256 (372)
Q Consensus 184 G~~~~l~a~~~~a~~~i~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~ 256 (372)
|+++++.++++.++++++.|+.+++ .+.+++++.+|+++.+.+++.+..+..++............ +.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999988 57999999999999886665555444444332211111001 111 3356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 257 VLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+..++.+|++++..+++.+++++++||.+.++.+.+|.+..+++|+++|+|++|+.+++|+++.+.|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7778899999999999999999999999999999999999999999999999999999999999999999975
No 28
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.5e-14 Score=131.02 Aligned_cols=271 Identities=18% Similarity=0.167 Sum_probs=196.7
Q ss_pred HHHHHHHHHHcc--CCc-hHHHHHHHHHHHHHHHHHHhhcCc-----cccccc------chhhhHHHHHHHHHHHHHHHH
Q 017423 53 LLSIINKWAIMK--FPY-PGALTALQYFTSAAGVLLCGYFKF-----LEHDAL------ELLTVWRFLPAAIIFYLSLFT 118 (372)
Q Consensus 53 ~~~~~~K~~l~~--~~~-p~~l~~~r~~~~~i~~~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 118 (372)
.+....|+.-.. .+| |.+..++-=++..+++....+.+. +..+.+ .+++..++...+++|......
T Consensus 29 ~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl 108 (345)
T KOG2234|consen 29 ALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNL 108 (345)
T ss_pred hHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhH
Confidence 367777777743 333 555554444555555544433321 111111 233556677777888887668
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-----------cccchHHHHH
Q 017423 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-----------YQFTVMAYSW 187 (372)
Q Consensus 119 ~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-----------~~~~~~G~~~ 187 (372)
.+.++.+.+++++++...+..+.++++.+++++|| .++++|.++++.+.|+.+...+. .+..+.|+..
T Consensus 109 ~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk-Ls~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~a 187 (345)
T KOG2234|consen 109 QYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK-LSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVA 187 (345)
T ss_pred HHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHH
Confidence 88999999999999999999999999999999999 99999999999999999876211 1234679999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhc-ccccchhHHHHHHHHHHHH
Q 017423 188 ALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTT-ASDWYSFEVVLPVGLSCIF 266 (372)
Q Consensus 188 ~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (372)
++.+|+..++..+|.+|++|+.+.+.|.........++++.....+.. |..... +.. +..| +...|+.++.-++-
T Consensus 188 vl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~--~~gff~G~-s~~vw~vVl~~a~g 263 (345)
T KOG2234|consen 188 VLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAIN--EYGFFYGY-SSIVWLVVLLNAVG 263 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccc--cCCccccc-cHHHHHHHHHHhcc
Confidence 999999999999999999998788777776666666655544444332 333322 111 1233 34466666666666
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423 267 GLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS 332 (372)
Q Consensus 267 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~ 332 (372)
|...++ .+|+.+-..-+....+..+++.+.|+.+||.++|....+|..+++.++.+|...+.
T Consensus 264 GLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 264 GLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred chhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 665553 35777777777777788899999999999999999999999999999999996553
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.69 E-value=4.6e-15 Score=132.36 Aligned_cols=214 Identities=18% Similarity=0.197 Sum_probs=165.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423 98 ELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD 177 (372)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~ 177 (372)
++++..++...++++.....+.+.++++++++++++++.+..+++++++++++||| .++++|.++++.+.|+.+...++
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~-ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRR-LSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHheeecCC
Confidence 34567778888889999888899999999999999999999999999999999999 99999999999999999875432
Q ss_pred c-----------------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHH
Q 017423 178 Y-----------------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240 (372)
Q Consensus 178 ~-----------------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (372)
. .....|++++++++++.++..++.+|++|+.+.+.|.........++++..+.... .+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~ 170 (244)
T PF04142_consen 92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSA 170 (244)
T ss_pred ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-ccccc
Confidence 1 11357999999999999999999999999987777777766666665554444322 22222
Q ss_pred HHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Q 017423 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI 319 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l 319 (372)
..+. ..+..+ +...|..+...++.|...+ ..+|+.+...-+....+..+++.++++++|+.++|....+|.++
T Consensus 171 ~~~~-g~f~G~-~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 171 ISES-GFFHGY-SWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred cccC-Cchhhc-chHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 2111 011223 2334555555555555443 35799999999999999999999999999999999999999865
No 30
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.69 E-value=9.9e-15 Score=126.84 Aligned_cols=278 Identities=21% Similarity=0.271 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHHHc-------cCCchHHHHHHHHHHHH-HHHHHHhhcCcccc-c-------c-c--chh--hhHHH
Q 017423 47 YCISASLLSIINKWAIM-------KFPYPGALTALQYFTSA-AGVLLCGYFKFLEH-D-------A-L--ELL--TVWRF 105 (372)
Q Consensus 47 ~~~~~~~~~~~~K~~l~-------~~~~p~~l~~~r~~~~~-i~~~~~~~~~~~~~-~-------~-~--~~~--~~~~~ 105 (372)
...+++..+++.||.-+ +|.+|+..+.. |+.+- .++.+....+.+.. + . . +.+ +.+.+
T Consensus 11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~-mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lf 89 (372)
T KOG3912|consen 11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALL-MFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLF 89 (372)
T ss_pred hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCccee
Confidence 33455567899999883 36667655543 33333 22223222222210 0 0 0 111 13345
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc--------
Q 017423 106 LPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-------- 177 (372)
Q Consensus 106 ~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-------- 177 (372)
++.+++-..+....+.++.+++++.+|++|....+|+.+++.-+++++ ...++|+++.....|++++...|
T Consensus 90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~t-i~~~qWl~i~fv~lGlviVg~~d~~~~~~p~ 168 (372)
T KOG3912|consen 90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRT-ITGRQWLGILFVSLGLVIVGSLDVHLVTDPY 168 (372)
T ss_pred cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcc-cchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence 667888777877889999999999999999999999999999999999 89999999999999999876543
Q ss_pred --cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-----HHHHHHHhhh---------HHHH
Q 017423 178 --YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-----FPLELLIMGE---------LKKI 241 (372)
Q Consensus 178 --~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~---------~~~~ 241 (372)
.+.-..|+++.+++-+.-|++.++.+|.+++.+.+|.+...|..+.++.+ .|...+..++ +.+.
T Consensus 169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~ 248 (372)
T KOG3912|consen 169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW 248 (372)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence 12335799999999999999999999999999999999888877665332 3333333231 1111
Q ss_pred HHhhhcccccchhHHHHHHHHHHHHHHH--HHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Q 017423 242 KHEMTTASDWYSFEVVLPVGLSCIFGLA--ISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI 319 (372)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l 319 (372)
......... ++ .+.+...|..-++ .|+......|..|+++-.+...++..+..+++.....|.+...|+.|.++
T Consensus 249 ~~~~~~~~e--~p--~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli 324 (372)
T KOG3912|consen 249 GDAFAALQE--SP--SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI 324 (372)
T ss_pred HHHHHHhcC--Cc--hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 000000001 11 1223333333222 23334445788999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccc
Q 017423 320 CMLGGVMYQQS 330 (372)
Q Consensus 320 il~g~~l~~~~ 330 (372)
.+.|.++|+..
T Consensus 325 Li~Gi~lY~~i 335 (372)
T KOG3912|consen 325 LIMGIILYNQI 335 (372)
T ss_pred HHHHHHHHHHH
Confidence 99999999743
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.63 E-value=8.1e-13 Score=116.65 Aligned_cols=268 Identities=13% Similarity=0.117 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhc--Ccccccccc--hhhhHHHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYF--KFLEHDALE--LLTVWRFLPAAIIFYLSLF 117 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 117 (372)
..+.+|+.++. ..++-| .++..+ +..+...|.+-+...++..... +.++..... ++.+..+...+++-..+..
T Consensus 11 ~~l~Ay~lwG~-lp~y~k-ll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~ 87 (293)
T COG2962 11 LALLAYLLWGL-LPLYFK-LLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW 87 (293)
T ss_pred HHHHHHHHHHH-HHHHHH-HHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 44567777764 667777 445667 8899999998877766554332 212212211 1222223333333333445
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHH
Q 017423 118 TNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTI 197 (372)
Q Consensus 118 ~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~ 197 (372)
...+|...-.+-.+++=...-|++.++++.+++||| .++.++++++++.+||..-.+...++++..+.+ +++|++
T Consensus 88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkEr-ls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~ 162 (293)
T COG2962 88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKER-LSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGL 162 (293)
T ss_pred HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHH
Confidence 555566655566677778889999999999999999 999999999999999998887777788777654 367788
Q ss_pred HHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHH---hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 017423 198 DFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLI---MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFG 274 (372)
Q Consensus 198 ~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (372)
|...-|++ +.+..+-..-- ...+.|+.... .++-... ....+...+..++.+|.++.+--...
T Consensus 163 Ygl~RK~~----~v~a~~g~~lE---~l~l~p~al~yl~~l~~~~~~-------~~~~~~~~~~LLv~aG~vTavpL~lf 228 (293)
T COG2962 163 YGLLRKKL----KVDALTGLTLE---TLLLLPVALIYLLFLADSGQF-------LQQNANSLWLLLVLAGLVTAVPLLLF 228 (293)
T ss_pred HHHHHHhc----CCchHHhHHHH---HHHHhHHHHHHHHHHhcCchh-------hhcCCchHHHHHHHhhHHHHHHHHHH
Confidence 87765553 34443322211 12233443321 1211100 01012223555667777776554445
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 275 FSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 275 ~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..+-++.+-.+.++..|++|....+++++++||+++..+.+..++|..|.++|....
T Consensus 229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999997654
No 32
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.57 E-value=1.3e-13 Score=124.76 Aligned_cols=212 Identities=17% Similarity=0.175 Sum_probs=159.7
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--------ccchHH
Q 017423 113 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--------QFTVMA 184 (372)
Q Consensus 113 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G 184 (372)
+...++.|.||.|++++..+++.+++-+|+..++.++.+|| .++.+.+++.+.++|+++++.+|. +-...|
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~-ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG 248 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVER-FTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG 248 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcch-hhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence 34567789999999999999999999999999998888888 999999999999999999987742 234789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC--CCchhHHHHHhHHHHHH-HHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423 185 YSWALAYLVSMTIDFVYIKHVVMTIG--LNTWGLVLYNNLEALLL-FPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG 261 (372)
Q Consensus 185 ~~~~l~a~~~~a~~~i~~k~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (372)
.++++++++.||+|.++.||-..+++ ++......|..++.+++ .|+..++.- .. ++..+.+. ... ...++
T Consensus 249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~--~~--~e~F~lP~--~~q-~~~vv 321 (416)
T KOG2765|consen 249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDF--FG--EERFELPS--STQ-FSLVV 321 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHH--hc--cCcccCCC--Cce-eEeee
Confidence 99999999999999999999887753 33333333444444332 344433211 00 00111111 111 22344
Q ss_pred HHHHHHHHH-HHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423 262 LSCIFGLAI-SFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS 332 (372)
Q Consensus 262 ~~~~~~~~~-~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~ 332 (372)
..+++++++ -|.+.++.--++|.+..+-..+....+.+...++=+.++++..++|.+.|++|.+..++..+
T Consensus 322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 455555554 45577888899999999999999999999999988999999999999999999998887653
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.36 E-value=3.3e-13 Score=115.95 Aligned_cols=265 Identities=12% Similarity=0.093 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHHHHc-cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 017423 45 AGYCISASLLSIINKWAIM-KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELL 123 (372)
Q Consensus 45 ~~~~~~~~~~~~~~K~~l~-~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 123 (372)
+..|.++ ..+.+..+-. +.+.|..-++..+..-++.--.+..+|+ +.+ +-.|++.+.+++.-+-+.++--.|.
T Consensus 26 LSL~~t~--~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~-~~~~~hYilla~~DVEaNy~vV~Ay 99 (336)
T KOG2766|consen 26 LSLLITS--TAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYI-KAKWRHYILLAFVDVEANYFVVKAY 99 (336)
T ss_pred HHHHHHc--chhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHH-HHHHHHhhheeEEeecccEEEeeeh
Confidence 3444444 2445555554 4777877777766544433333333332 221 2345666666655444444456789
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--------ccchHHHHHHHHHHHHH
Q 017423 124 LHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--------QFTVMAYSWALAYLVSM 195 (372)
Q Consensus 124 ~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~ 195 (372)
+|++....+.+..-..+.+++++++++|.| +++.++.+++++++|+.+...+|. +....|+.++++++-+|
T Consensus 100 QyTsmtSi~lLDcwaip~v~~lsw~fLktr-Yrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlY 178 (336)
T KOG2766|consen 100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTR-YRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLY 178 (336)
T ss_pred hhcchHHHHHHHHhhhHHHHHHHHHHHHHH-HhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceee
Confidence 999999999999999999999999999999 999999999999999998876552 23457999999999999
Q ss_pred HHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH-HHHHHHHHHH-
Q 017423 196 TIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS-CIFGLAISFF- 273 (372)
Q Consensus 196 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 273 (372)
|..++..+.+.|+ .+..+++....+.+.++-.+.++.+-. . ....+|. +-...+. ..+..+.-|+
T Consensus 179 aVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~~~~--~-----~~tl~w~----~~i~~yl~f~L~MFllYsl 245 (336)
T KOG2766|consen 179 AVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIFERH--H-----VSTLHWD----SAIFLYLRFALTMFLLYSL 245 (336)
T ss_pred eeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhhhcc--c-----eeeEeeh----HHHHHHHHHHHHHHHHHHh
Confidence 9999999998876 667777665555554443333322111 0 0112332 1122222 2333333444
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.-..+|..|++..++-.......++++ ..||-+++|.-.+..+.+..|.++|..+.
T Consensus 246 ~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 246 APILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred hHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 334578888888887777778888877 67888999999999999999999996443
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.31 E-value=3e-11 Score=107.13 Aligned_cols=191 Identities=17% Similarity=0.158 Sum_probs=129.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------------------------
Q 017423 126 ANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--------------------------- 178 (372)
Q Consensus 126 ~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--------------------------- 178 (372)
+++|.....++..++++++....+.++| ++..++++..++..|+.....+|.
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~-~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQ-VTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred ccccchHHHHhcchHHHHHhccccccee-eehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 4678888999999999999998888888 779999999999998875322211
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhh--c-ccccchhH
Q 017423 179 QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMT--T-ASDWYSFE 255 (372)
Q Consensus 179 ~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~~~~ 255 (372)
...+.|....+.++++.++-.+++++..|+++.. +|.+..++.+........++.....+... . ...+ +..
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 154 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY-PTA 154 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC-chH
Confidence 1235677778888888899999999986654332 34433332221111111111110000000 0 1112 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhh
Q 017423 256 VVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY 327 (372)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~ 327 (372)
.|.. .+...+.+.+..+++|+.++.+.++...++++++.++|+++|||+++..+++|..+++.|+++|
T Consensus 155 ~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 155 VWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2222 2333333444667899999999999999999999999999999999999999999999998775
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.17 E-value=2.5e-10 Score=88.18 Aligned_cols=136 Identities=14% Similarity=0.146 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423 184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS 263 (372)
Q Consensus 184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
-.+|++++++++++..++.|.-.++ .||...+..-++....++....+..|+++.. ...+...|..++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~--------~~~~~k~~lflilS 73 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQAG--------GEIGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceecc--------cccCcceehhhhHH
Confidence 4678999999999999999987766 5565555555554444444444556654322 11233456667888
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
|+.+-.--+++|++++.-.++.+..+.-..+++++++|+++++|++|..+|+|+++|..|.++.++
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 977776666789999999999999999999999999999999999999999999999999887654
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.15 E-value=4e-10 Score=90.04 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=95.7
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhh-cCcccccccchhhhHHHHHHHHH-HHHHHHHHHHhhhccchhHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAII-FYLSLFTNSELLLHANVDTF 131 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~ 131 (372)
..+.+|...++++ |...+++|+..+.+ +..+.. .+..+.+..+++.+......+++ ......+.+.++++++++..
T Consensus 6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 5678899999988 99999999999886 433333 22222345566666767777766 46678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
+++.++.|+++.+++++++||+ ++++++.+++++++|+.++
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999999998865
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.06 E-value=1.2e-09 Score=87.25 Aligned_cols=124 Identities=19% Similarity=0.354 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 017423 193 VSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISF 272 (372)
Q Consensus 193 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (372)
++|+.+.++.|+..++ .++....++....+.+ ..+.....+... . ..+ +...+....+.++++...++
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-------~~~-~~~~~~~~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F-------KNL-SPRQWLWLLFLGLLGTALAY 68 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c-------cCC-ChhhhhhhhHhhccceehHH
Confidence 4688999999999877 7788888888877654 333322222211 0 111 22234445666666544455
Q ss_pred -HHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 273 -FGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 273 -~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
..++++++.++...+++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 69 ~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 69 LLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999998753
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.96 E-value=1.2e-08 Score=79.01 Aligned_cols=121 Identities=15% Similarity=0.170 Sum_probs=99.0
Q ss_pred HHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhh-cCcccc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 017423 53 LLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGY-FKFLEH-DALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDT 130 (372)
Q Consensus 53 ~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 130 (372)
...+..|..+++.+ |.+-+..|-++..+.++.... .+..+. ..++.|.+..+..-|+....+..+.+.|++.-.+|.
T Consensus 17 L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~ 95 (140)
T COG2510 17 LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASR 95 (140)
T ss_pred HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcce
Confidence 45789999999999 999999999777766555433 332222 235666677677777777788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 131 FIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 131 ~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
..-+..++|+++++++++++||| ++..+|++++++.+|+.+++.
T Consensus 96 VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 96 VVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred EEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999 999999999999999987753
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.91 E-value=3.9e-07 Score=81.42 Aligned_cols=214 Identities=12% Similarity=0.095 Sum_probs=149.8
Q ss_pred cccch--hhhHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHHHHHHHHcCCCCCCHhHHH----HHHHHh
Q 017423 95 DALEL--LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFI-VFRSAVPIFVAIGETLFLHQPWPSIKTWL----SLATIF 167 (372)
Q Consensus 95 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~v~~~~~l~l~~~~~~~~~~~----~~~~~~ 167 (372)
+.++. +.+..-+..|++-..+....+.+.+++.+|.+. +-..++-+.+.++++++++|- .+..++. ++++.+
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW-~~~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW-TTTTQKIIGFLALVLII 114 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC-CCcchHHHHHHHHHHHH
Confidence 44443 556666667777788888889999888887773 444667778889999999997 4544433 678888
Q ss_pred hhhhheeeccccc--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHH
Q 017423 168 GGSVIYVLTDYQF--------TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELK 239 (372)
Q Consensus 168 ~Gv~l~~~~~~~~--------~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (372)
+|+.+.+..|.+. ...|+...+++.+.|..|.+..|- .+.++++..+=+.+.-++-..+..+... .
T Consensus 115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~~--~ 188 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFSK--K 188 (269)
T ss_pred HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhccc--c
Confidence 9999988765321 235999999999999999999886 3467777766444322211122211111 0
Q ss_pred HHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchh----hHH
Q 017423 240 KIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWV----GTV 315 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~----~~~ 315 (372)
. ......|. =...|++-...+.+++.+.++.+..+.-.+.-+..+++++.|.+++||+-+.. .++
T Consensus 189 ~----------~~~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~ 257 (269)
T PF06800_consen 189 P----------FFEKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLI 257 (269)
T ss_pred c----------ccccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHH
Confidence 0 00111122 24567777777887888899999999999999999999999999999987755 557
Q ss_pred HHHHHHHhhhh
Q 017423 316 GLLICMLGGVM 326 (372)
Q Consensus 316 G~~lil~g~~l 326 (372)
|.++++.|.++
T Consensus 258 G~~Liv~G~il 268 (269)
T PF06800_consen 258 GLILIVIGAIL 268 (269)
T ss_pred HHHHHHHhhhc
Confidence 88888888654
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.90 E-value=1.6e-08 Score=79.53 Aligned_cols=105 Identities=21% Similarity=0.226 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhhcCccc--c-cccchhhhHHHHHHHHHHH-HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 017423 73 ALQYFTSAAGVLLCGYFKFLE--H-DALELLTVWRFLPAAIIFY-LSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETL 148 (372)
Q Consensus 73 ~~r~~~~~i~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l 148 (372)
.+|+..+.+.+......+.+. . +.++++++..+...++... ....+.+.++++.+ +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 467777776665544332111 1 1223344445555566654 56788889999999 58889999999999999999
Q ss_pred HcCCCCCCHhHHHHHHHHhhhhhheeecccc
Q 017423 149 FLHQPWPSIKTWLSLATIFGGSVIYVLTDYQ 179 (372)
Q Consensus 149 ~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~ 179 (372)
++||| .+++++.+++++++|++++..+|.+
T Consensus 81 ~~~er-~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKER-LSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCC-CCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999 9999999999999999998877653
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.88 E-value=1.3e-07 Score=87.47 Aligned_cols=140 Identities=10% Similarity=0.061 Sum_probs=100.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHH
Q 017423 180 FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLP 259 (372)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 259 (372)
....|++++++++++|+...+..|.. . +.++.++.++...++.+++.+.....++.+..... ..++ ..+..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~---~~~~---~~~~~ 75 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL---IQTP---QKIFM 75 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH---HcCH---HHHHH
Confidence 44579999999999999999999764 3 47899999999888754333333333332221100 0011 11222
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
....++.......+.+++++++++...++..+..|++.+++++++++|+++..+++|+++.+.|+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 223333333344458899999999999999999999999999999999999999999999999988654
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.84 E-value=2.3e-07 Score=84.01 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423 183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL 262 (372)
Q Consensus 183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (372)
.|+.++++++++|+...+..|. .. +.++.++.++-.+++.+++.+.....+......+... .......+.....
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK---RIQKRPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHh---CcccchHHHHHHH
Confidence 4889999999999999999997 43 3889999999988775544433323332211101000 0111112334556
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 263 SCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
.|++......+.+++++++++.+.++..+..|++++++++++++|+++..+++|.++.+.|+.+..
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 666655555568889999999999999999999999999999999999999999999999987653
No 43
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.76 E-value=2.9e-07 Score=76.72 Aligned_cols=218 Identities=11% Similarity=0.040 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--cc
Q 017423 103 WRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--QF 180 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--~~ 180 (372)
++..|.+++-.+..+..-.+++.++++.++.+-.+--.|+.++++..+|.| ....++++.+++++|+++..+.|. ..
T Consensus 54 ~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~-~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 54 IRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDR-FMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccc-hhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 344555555555566778899999999999999999999999999999999 899999999999999999998774 45
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHH-----HHHHHHHHHHhhhHHHHHHhhhcccccchhH
Q 017423 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEA-----LLLFPLELLIMGELKKIKHEMTTASDWYSFE 255 (372)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 255 (372)
++.|+.++.+++...++|-++-|+....-+... ...+++..+ +.-+|+..+.......+.+ + . ..
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qs----F-A---~~ 202 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGD--AAHFMSCLGFFNLCFISFPALILAFTGVEHLQS----F-A---AA 202 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHH----H-h---hC
Confidence 789999999999999999999999886633322 222333222 1112333332222121111 0 0 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 256 VVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.|..++-.+.+....++.....+..+.|...|+=..........+..++-+-..+.....|..+|..|.++.-...
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 2333333333334444443344566777777766666666667777777677889999999999999988765543
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.76 E-value=2.5e-07 Score=84.97 Aligned_cols=132 Identities=12% Similarity=0.021 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHH-HHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423 185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEA-LLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS 263 (372)
Q Consensus 185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
+++.+.++++++.+.++.|+..++ .++. .++..... +++.|.... ....... .......+..+...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~ 69 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLW-YLAQVGW--------SRLPATFWLLLAIS 69 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHH-hcccCCC--------CCcchhhHHHHHHH
Confidence 567889999999999999988765 3333 24444333 333343321 1100000 11112223345556
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
++......++.+.++++.++...+++.+..|+++.++++++++|+++..+++|+++++.|+++...
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 666666666778899999999999999999999999999999999999999999999999987654
No 45
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.63 E-value=2.4e-06 Score=68.40 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423 183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL 262 (372)
Q Consensus 183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (372)
.|+++.+.+.++.+...++.|+=+++.+. .+.... .. ...... . .+. ..++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~~------~~~~~~-~----------------~p~---~~i~ 52 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-FI------AALLAF-G----------------LAL---RAVL 52 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-HH------HHHHHH-h----------------ccH---HHHH
Confidence 47889999999999999999987766332 111100 00 000000 0 010 1345
Q ss_pred HHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHH--hcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 263 SCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLV--IWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 263 ~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~--~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.|++.+..++. +..++++.+......+....++...+.++. +|||++|+.+++|+++|++|+++.++.+
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 57777777776 778899999999999999888888888885 8999999999999999999999987654
No 46
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.53 E-value=6e-06 Score=74.80 Aligned_cols=115 Identities=17% Similarity=0.050 Sum_probs=86.2
Q ss_pred HHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHH-HHHHHHHHHhhhccchhHH
Q 017423 54 LSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIF-YLSLFTNSELLLHANVDTF 131 (372)
Q Consensus 54 ~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~ 131 (372)
..+..|...++.+. +.....+|+.++.+.+........++ +..+.+.+...+..+++. ..+..+.+.++++.+++.+
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 46678888876663 34555578888877665554432222 223444555555556554 4567788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhh
Q 017423 132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGS 170 (372)
Q Consensus 132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv 170 (372)
+++.++.|++.++++++++||+ ++..++.+..+++.|+
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhc
Confidence 9999999999999999999999 9999999999999886
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.49 E-value=7.3e-06 Score=77.59 Aligned_cols=137 Identities=17% Similarity=0.213 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-HHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423 183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-FPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG 261 (372)
Q Consensus 183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (372)
.-+..++..-++|+.+.++.|..++ .++++....+|-..++.++ +|.......+. . .+..+| ..+..+.
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~-----~~~~~~---~~~~~l~ 82 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-S-----LPPLSV---SILSKIG 82 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-c-----cCcchH---HHHHHHH
Confidence 3455666777899999999999885 4789999888887776433 34332221110 0 000112 2234455
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHh------cCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVI------WDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~------~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
..|+++...+...++.++++++...+++.++.|+++.++++++ ++|+++..+++|+++.++|+++...
T Consensus 83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 5677774444457788999999999999999999999999999 6999999999999999999987554
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.33 E-value=1.1e-05 Score=74.41 Aligned_cols=64 Identities=22% Similarity=0.210 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
.+..+-..+..|+.+.|.+..+=+.+...++.++++..++||| .+++.+.|..+++.|..++..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~-~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEK-LTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc-chHhHHhhHHHHHhhheeeEE
Confidence 3455667888999999999999999999999999999999999 999999999999999886543
No 49
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.29 E-value=2.5e-05 Score=61.28 Aligned_cols=71 Identities=11% Similarity=0.240 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 260 VGLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 260 ~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.+..|+++...++. +++++++.++ .++....+.|+++.++|+++++|+++...++|.++++.|+++..+.+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 44456666544444 6678899885 77789999999999999999999999999999999999999887655
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.16 E-value=0.00012 Score=67.71 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHH
Q 017423 186 SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCI 265 (372)
Q Consensus 186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (372)
+..++-.+.|+...+..|...+ +.++....++-...+.+++.+....... .......+......|+
T Consensus 11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~------------~~~~~~~~~~~~~~g~ 76 (292)
T PRK11272 11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGH------------PLPTLRQWLNAALIGL 76 (292)
T ss_pred HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCcHHHHHHHHHHHH
Confidence 4455667889999999998765 4889999888887764443333222221 0001112333344555
Q ss_pred HHHHH-HHHHHHHh-cccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 266 FGLAI-SFFGFSCR-RAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 266 ~~~~~-~~~~~~~i-~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+.... ....+.+. +++++...++..++.|+++.+++++ ++|+++..+++|.++.+.|+.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence 54333 33355666 8999999999999999999999985 7999999999999999999887754
No 51
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.15 E-value=0.00012 Score=65.43 Aligned_cols=141 Identities=9% Similarity=0.079 Sum_probs=106.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHH
Q 017423 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPV 260 (372)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 260 (372)
+..|+++.+.+-+.|+..-.+.|-+ + +.++.++..|-.+-++++..........+++..+. ..++..+...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~------~~~p~~~~~~ 75 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQL------LKQPKTLLML 75 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH------HhCcHHHHHH
Confidence 4579999999999999988888865 3 37788888888877766665655556666665431 2233334444
Q ss_pred HHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 261 GLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 261 ~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..++++- ..|.. ..|+..+-.....|+=-+++|.+.+++|.++++|+++..|++...+..+|+..-.+..
T Consensus 76 ~l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 76 ALTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 4433333 34555 4578899899999999999999999999999999999999999999999998755433
No 52
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.15 E-value=0.00013 Score=56.88 Aligned_cols=56 Identities=9% Similarity=0.039 Sum_probs=51.3
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
...++++.+.......-++.++.++++|+++|||++|+.+++|+++++.|+++...
T Consensus 54 ~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 54 WLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 55678999999999999999999999999999999999999999999999987653
No 53
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.13 E-value=0.00018 Score=66.48 Aligned_cols=117 Identities=18% Similarity=0.162 Sum_probs=79.9
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHH-HHHHHHHHHhhhccchhHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIF-YLSLFTNSELLLHANVDTFI 132 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~ 132 (372)
+.+..|...++.+ |..... ++.++.+.+........ .....++..+...+..+++. .....+.+.++++.+++.++
T Consensus 163 ~~v~~r~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as 239 (293)
T PRK10532 163 YILSGQRAGAEHG-PATVAI-GSLIAALIFVPIGALQA-GEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG 239 (293)
T ss_pred HHHHHHHHhccCC-chHHHH-HHHHHHHHHHHHHHHcc-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence 4566676766666 555544 44444443333322211 11122333333334455543 34466789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
++..+.|++..++++++++|+ ++..++++.+++++|++...
T Consensus 240 ~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 240 TLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999987664
No 54
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.13 E-value=0.00018 Score=68.29 Aligned_cols=133 Identities=11% Similarity=0.050 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCC-chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHH
Q 017423 186 SWALAYLVSMTIDFVYIKHVVMTIGLN-TWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLS 263 (372)
Q Consensus 186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 263 (372)
.+++.--.+...++++.|..++. .+ |+.+..++.+.+.++...... .+ ... .+... ....+..++..
T Consensus 52 ~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~-------~~~~~~~~~~~~~llp~ 120 (350)
T PTZ00343 52 LLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TG-FRK-------IPRIKSLKLFLKNFLPQ 120 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hC-CCC-------CCCCCCHHHHHHHHHHH
Confidence 33333334445568889998877 55 888888887776433222211 11 100 01111 11234456677
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
|+++.......+.++++++++.++++..+.|++++++++++++|+++..+++|++++++|+++...
T Consensus 121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 777776655567889999999999999999999999999999999999999999999999998653
No 55
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.10 E-value=0.00014 Score=67.24 Aligned_cols=117 Identities=18% Similarity=0.171 Sum_probs=78.9
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV 133 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i 133 (372)
+.+.+|...++.+ |.... ....+.. +..............+++.+...+..++.......+.+.++++.+++.+++
T Consensus 171 ~~v~~k~~~~~~~-~~~~~--~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~ 246 (295)
T PRK11689 171 YCNVTRKYARGKN-GITLF--FILTALA-LWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLAT 246 (295)
T ss_pred HHHHHhhccCCCC-chhHH--HHHHHHH-HHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 4566666665555 54332 2222222 222122211111223444454455455444556778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 134 FRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 134 i~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
+.++.|++.+++++++++|+ ++..++++.++++.|+.+...
T Consensus 247 ~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 247 ASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999 999999999999999876543
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.08 E-value=0.00014 Score=56.73 Aligned_cols=62 Identities=24% Similarity=0.311 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 112 FYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 112 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
+....++...+++..|.+.+..+.++.++++++++++++||+ .++++++++.++++|++++.
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~-ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEP-VSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHh
Confidence 444577778889999999999999999999999999999999 99999999999999998764
No 57
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.98 E-value=0.013 Score=54.78 Aligned_cols=231 Identities=11% Similarity=-0.065 Sum_probs=131.3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCC------CCHhHHHHHHHHhhhh
Q 017423 98 ELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPW------PSIKTWLSLATIFGGS 170 (372)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~------~~~~~~~~~~~~~~Gv 170 (372)
+.+.+..-+..|++-..+......+.+++.+|.. -+...++-++..++..++++|-. -.....+++++.++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 3344444455566666777778888999888887 45566777788888888877531 1133566788899999
Q ss_pred hheee----ccc--------ccc-hHHHHHHHHHHHHHHHHHH-------HHHHHhhccCCCchhHHHHHhH---HH-HH
Q 017423 171 VIYVL----TDY--------QFT-VMAYSWALAYLVSMTIDFV-------YIKHVVMTIGLNTWGLVLYNNL---EA-LL 226 (372)
Q Consensus 171 ~l~~~----~~~--------~~~-~~G~~~~l~a~~~~a~~~i-------~~k~~~~~~~~~~~~~~~~~~~---~~-~~ 226 (372)
++.+. .|. +++ ..|+++++++.+.+++|+. ..+.. .+.+.+++....-+.. .+ ++
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHHH
Confidence 98876 332 122 4599999999999999993 33322 1223444332222211 11 11
Q ss_pred HHHHHHHHhhhHHHHHHhhhcccccch--hHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH----HHHHHHHHHHHHHH
Q 017423 227 LFPLELLIMGELKKIKHEMTTASDWYS--FEVVLPVGLSCIFGLAISFFGFSCRRAISATGF----TVLGIVNKLLTVVI 300 (372)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~----s~~~~l~~v~~~~l 300 (372)
..+.+-.....-........+...-.. ..-.+.....|++-...++.+...-++.+.... .+-+-..-+++.+.
T Consensus 228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 111111100000000000000011000 112223345566666666666666566643322 23335666889999
Q ss_pred HHHhcCCCCc------hhhHHHHHHHHHhhhhhccc
Q 017423 301 NLVIWDKHST------WVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 301 s~~~~~e~~t------~~~~~G~~lil~g~~l~~~~ 330 (372)
|. +++|.=+ ...++|.+++++|..+....
T Consensus 308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 99 5999777 77899999999998876543
No 58
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.95 E-value=0.0002 Score=66.12 Aligned_cols=132 Identities=12% Similarity=0.095 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423 184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS 263 (372)
Q Consensus 184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
|++++++++++|+...+..|+.. +.++.+.. . ...+..++........+ +.......+..-..+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~-~-~~~g~l~~~~~~~~~~~-----------~~~~~~~~~~~g~l~ 65 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL-G-TTFGALILSIAIAIFVL-----------PEFWALSIFLVGLLS 65 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH-H-HHHHHHHHHHHHHHHhC-----------CcccccHHHHHHHHH
Confidence 67899999999999999999864 34343332 1 22232233332222111 011112233334455
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCCchhh----HHHHHHHHHhhhhhcccc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHSTWVG----TVGLLICMLGGVMYQQST 331 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~----~~G~~lil~g~~l~~~~~ 331 (372)
|++-...++.++.++++.+.+..-.+.+ +.++++++++.++|||+.+..+ .+|.++++.|.++....+
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 6666666677889999999999977777 8888999999999999999999 999999999999876554
No 59
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.95 E-value=0.00035 Score=64.81 Aligned_cols=124 Identities=12% Similarity=0.034 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHH
Q 017423 186 SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCI 265 (372)
Q Consensus 186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (372)
++.++++++|+...+..|...++ .++....++-..++.+.+.+. ...+ ...+. .+...|+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~~~l~~~--~~~~----------~~~~~------~~~~~g~ 66 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHN--MPPLMLAGLRFMLVAFPAIFF--VARP----------KVPLN------LLLGYGL 66 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHH--hcCC----------CCchH------HHHHHHH
Confidence 55788899999999999987765 889888888876643221111 1110 00111 1222233
Q ss_pred HHHHHHHH-HHHHhcc-cchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 266 FGLAISFF-GFSCRRA-ISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 266 ~~~~~~~~-~~~~i~~-~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
......+. .+.++++ .++...+++.+..|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 67 TISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 33333332 4455665 5788999999999999999999999999999999999999999887664
No 60
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.95 E-value=7.7e-05 Score=67.39 Aligned_cols=214 Identities=9% Similarity=0.071 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccc---------
Q 017423 111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT--------- 181 (372)
Q Consensus 111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~--------- 181 (372)
....+=..++.|+.|.|.+..+-+.+++.+..++++..+++|| .++...++..+++.|..++....+..+
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ek-l~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~ 151 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEK-LNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVW 151 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHH-HHHhhhhheeEEecccEEEEEecCcccccccHHHHH
Confidence 3456667889999999999999999999999999999999999 899999999999999887655432110
Q ss_pred ----hHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-HHHHH--HHhhhHHHHHHhhhcccccch
Q 017423 182 ----VMAY-SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-FPLEL--LIMGELKKIKHEMTTASDWYS 253 (372)
Q Consensus 182 ----~~G~-~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~g~~~~~~~~~~~~~~~~~ 253 (372)
-.++ +++.+-.+...+-..+.+. +++ ..-++.|..+.+++- +.+.. .+.+-..... ........
T Consensus 152 ~~~~~~~Fliy~~~iil~~~il~~~~~p---~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~---~g~~ql~~ 223 (335)
T KOG2922|consen 152 ELATEPGFLVYVIIIILIVLILIFFYAP---RYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTF---SGNNQLFY 223 (335)
T ss_pred HHhcCccHHHHHHHHHHHHHHHheeecc---ccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHh---cCCccccc
Confidence 0121 1111111111111111121 111 111223333333210 00000 0000001110 00111222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCC--CCch----hhHHHHHHHHHhhhh
Q 017423 254 FEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDK--HSTW----VGTVGLLICMLGGVM 326 (372)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e--~~t~----~~~~G~~lil~g~~l 326 (372)
+..|..++....+....-.....+++..++..++...| +=..++++.|.++|+| ..+. ....|+..++.|+++
T Consensus 224 ~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~fl 303 (335)
T KOG2922|consen 224 PLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFL 303 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeE
Confidence 23344444444444433333556788887777776666 3456667778888887 3343 346788889999998
Q ss_pred hcccccC
Q 017423 327 YQQSTSN 333 (372)
Q Consensus 327 ~~~~~~~ 333 (372)
....|+.
T Consensus 304 L~~~kd~ 310 (335)
T KOG2922|consen 304 LHRTKDM 310 (335)
T ss_pred eeeeccc
Confidence 8766533
No 61
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.85 E-value=0.00088 Score=62.16 Aligned_cols=123 Identities=11% Similarity=-0.032 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 017423 195 MTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFG 274 (372)
Q Consensus 195 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (372)
...++++.|+.+++. ..|..+.+.+...+.+...+. ...+. ...... +...+..+...|++........
T Consensus 14 ~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 82 (302)
T TIGR00817 14 NVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGL--------PKRLKI-SSALLKLLLPVAIVHTIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCC--------CCCCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 334567888888652 346666666655543222111 10110 000111 1122444556676665554457
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 275 FSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 275 ~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
+++++++++...+++..+.|+++.++++++++|+++..+++|.+++++|+++..
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 889999999999999999999999999999999999999999999999998754
No 62
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.76 E-value=0.0024 Score=52.68 Aligned_cols=121 Identities=14% Similarity=0.167 Sum_probs=84.1
Q ss_pred HHHHHHHHHHcc-----CCc-hHHHHHHHHHHHHHHHHHHhhc-Cccccc----cc-------chhhhHHHHHHHHHHHH
Q 017423 53 LLSIINKWAIMK-----FPY-PGALTALQYFTSAAGVLLCGYF-KFLEHD----AL-------ELLTVWRFLPAAIIFYL 114 (372)
Q Consensus 53 ~~~~~~K~~l~~-----~~~-p~~l~~~r~~~~~i~~~~~~~~-~~~~~~----~~-------~~~~~~~~~~~~~~~~~ 114 (372)
...+..|..+++ .+. +..+..+....+.+++.+.... +..+.. .. +.+....++..+++...
T Consensus 14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
T PF03151_consen 14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFL 93 (153)
T ss_pred HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHH
Confidence 355666666654 222 6777766666666665554332 221110 01 11223344444555555
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 115 SLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 115 ~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
.....+..++++++-+.+++.....+++.+++.++++|+ .+..++.|+++.+.|+.+.+
T Consensus 94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~-~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEP-ITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCc-CCHHHHHHHHHHHHHHheee
Confidence 677778889999999999999999999999999999999 99999999999999987653
No 63
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.69 E-value=0.0016 Score=60.41 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhhccCCC--chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 017423 194 SMTIDFVYIKHVVMTIGLN--TWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAIS 271 (372)
Q Consensus 194 ~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (372)
++..+.++++++.++...+ ++.+.+.+.....+.......... . ......+ +--....+++..+..
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~------~---~~~~~~~---~~~~~~~~~~~~~~~ 78 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK------F---PKSRKIP---LKKYAILSFLFFLAS 78 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc------c---cCCCcCh---HHHHHHHHHHHHHHH
Confidence 3444667889888765544 666666665444332222221111 0 0011111 112233355555556
Q ss_pred HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 272 FFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 272 ~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
...+.++++++..+..++-..+++.+.+++.++++++.+..++++.+++.+|++++...+.+.
T Consensus 79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 667788999999999999999999999999999999999999999999999999988766443
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.52 E-value=0.00085 Score=52.80 Aligned_cols=66 Identities=14% Similarity=0.245 Sum_probs=50.6
Q ss_pred HHHHHHHH-HHHHhcccchhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 266 FGLAISFF-GFSCRRAISATG-FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 266 ~~~~~~~~-~~~~i~~~~a~~-~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..+..++. ...++|+.+... +++..-+..+.++++|+++|+|++|+.+++|+++++.|++..+...
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 33334443 445677776554 3455568889999999999999999999999999999999876554
No 65
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.49 E-value=0.0074 Score=55.10 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423 182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG 261 (372)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (372)
..+....+...+.++......|...+. ..+.....++....+.+. ... ....... . ....... .+...+
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~-~---~~~~~~~--~~~~~~ 74 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALL-LLP---LLLLEPR-G---LRPALRP--WLLLLL 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHH-HHH---HHHhhcc-c---ccccccc--hHHHHH
Confidence 356777777778888888888877654 233334444344333322 111 1111100 0 0001111 122233
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH-HhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL-VIWDKHSTWVGTVGLLICMLGGVMYQQSTS 332 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~-~~~~e~~t~~~~~G~~lil~g~~l~~~~~~ 332 (372)
..++......+..+.+++++++.......+..|++..++++ ++++|+++..+++|..+.+.|+++......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 33444444444577789999999999999999999999997 677999999999999999999998877653
No 66
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.41 E-value=0.0016 Score=50.53 Aligned_cols=67 Identities=12% Similarity=0.180 Sum_probs=51.7
Q ss_pred HHHHHHHHH-HHHHhcccchhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 265 IFGLAISFF-GFSCRRAISATG-FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 265 ~~~~~~~~~-~~~~i~~~~a~~-~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
+.++..++. ...++++.+... +++..-+..+.++++|+++|+|++|+.+++|+++++.|++..+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 334444444 345677776554 4555668889999999999999999999999999999999987554
No 67
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.39 E-value=0.013 Score=47.65 Aligned_cols=131 Identities=15% Similarity=0.191 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHH
Q 017423 185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSC 264 (372)
Q Consensus 185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (372)
.++.+.+-.+-+++..+.-++.++.+ +++...+.+...+.+......+..++. +. ....+..+| ....|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~-------~~~~~~p~w--~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL-------ASLSSVPWW--AYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc-------chhccCChH--HhccH
Confidence 45677777888888888888877633 588877777777765555554444432 11 112122223 33488
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHH-HHHHHHH-hc---CCCCchhhHHHHHHHHHhhhh
Q 017423 265 IFGLAISFFGFSCRRAISATGFTVLGIVNKLL-TVVINLV-IW---DKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~-~~~ls~~-~~---~e~~t~~~~~G~~lil~g~~l 326 (372)
+++..+-++....+.+.++.....+....+++ +.+++.+ +| ++++++...+|.++++.|+++
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 99988888888889999999988887766554 4566665 23 368999999999999999864
No 68
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.38 E-value=0.001 Score=59.52 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423 259 PVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS 332 (372)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~ 332 (372)
.+..-+++-.+.+...|.++++.+|.+..+..-.|.+++.++++++++.+++..||+++.+...|+.+......
T Consensus 19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 34556667777788888999999999999999999999999999999999999999999999999998876553
No 69
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.34 E-value=0.0072 Score=56.47 Aligned_cols=70 Identities=17% Similarity=0.406 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..+++-...++....+.++++.+...++.....+++.++|+++++++.++.+++|++++++|+.+.....
T Consensus 84 lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 84 LLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 3478888889999999999999999999999999999999999999999999999999999998876655
No 70
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.23 E-value=0.011 Score=55.43 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHH-hHHHHHHHHHHH--HHhhhHHHHHHhhhcccccchhHHHH
Q 017423 182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYN-NLEALLLFPLEL--LIMGELKKIKHEMTTASDWYSFEVVL 258 (372)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~ 258 (372)
..|+++++++++|++.+.+-+|+ .|+ -+|+..+-. .+++-++.|... +..+++.+..+ .. +...+.
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~------~~-~~~~~~ 74 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYS------SF-SGSTLL 74 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH------hc-CHHHHH
Confidence 47999999999999999999887 332 344444211 112223334221 11222222211 11 233455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCC-------chhhHHHHHHHHHhhhhhccc
Q 017423 259 PVGLSCIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHS-------TWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~-------t~~~~~G~~lil~g~~l~~~~ 330 (372)
....+|++-.+-+..++..+++.+-+..-.+.. ++-+.+++++.+++||-. .....+|.+++++|+++..+.
T Consensus 75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 566778887777888888888888766555444 788899999999998643 245788999999999998773
Q ss_pred c
Q 017423 331 T 331 (372)
Q Consensus 331 ~ 331 (372)
-
T Consensus 155 g 155 (345)
T PRK13499 155 G 155 (345)
T ss_pred h
Confidence 3
No 71
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.22 E-value=0.0035 Score=50.24 Aligned_cols=66 Identities=20% Similarity=0.152 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH--HcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423 111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETL--FLHQPWPSIKTWLSLATIFGGSVIYVLTD 177 (372)
Q Consensus 111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l--~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~ 177 (372)
.+.....+.+.+++..+.+.+.-+.+..+.++.+.++. ++||+ .++.++++++++++|+.++..++
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~-ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNET-FSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhccCC
Confidence 35566788999999999999999999999888888874 79999 99999999999999999876543
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.11 E-value=0.014 Score=45.09 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 109 AIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 109 ~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
.+.+..+.++-..+++.+|.+.+ .+.....-+.+.+.+.+++||+ .++.++.++.+++.|+...
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~-~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR-LNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHh
Confidence 34455567777888999999988 6667788899999999999999 9999999999999998864
No 73
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.04 E-value=0.0051 Score=48.40 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 106 LPAAIIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 106 ~~~~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
....+.+..++++...+++++|.+.+..+ ....-+.+++++.+++||+ .+..+++++.++++|+..+-.
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~-~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDES-LSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHhhc
Confidence 33444566677788889999999998655 6789999999999999999 999999999999999987644
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.01 E-value=0.0073 Score=46.01 Aligned_cols=64 Identities=11% Similarity=0.269 Sum_probs=51.0
Q ss_pred HHHHHH-HHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 268 LAISFF-GFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 268 ~~~~~~-~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
...+|. .-.++|+.+-. -+++..-+..+.+++.|+++|+|++++.+++|+.++++|++..+...
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 333443 33567777644 46788889999999999999999999999999999999999876543
No 75
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.00028 Score=61.34 Aligned_cols=218 Identities=8% Similarity=0.048 Sum_probs=140.8
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHHHHHHHHcCCCCCCHhH-H---HHHHHHhhh
Q 017423 95 DALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFI-VFRSAVPIFVAIGETLFLHQPWPSIKT-W---LSLATIFGG 169 (372)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~v~~~~~l~l~~~~~~~~~-~---~~~~~~~~G 169 (372)
|..+.+.+..-+.-|++-..+...++.+.+++.+|.+. +-..++-+-+.+++++.+||- .+..+ . .++++.+.|
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG 130 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIG 130 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHh
Confidence 44455555544555555566777788898888888773 344556667778899999997 55444 3 357888899
Q ss_pred hhheeeccc---c-----cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHH
Q 017423 170 SVIYVLTDY---Q-----FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 241 (372)
Q Consensus 170 v~l~~~~~~---~-----~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (372)
+.+.++.|. + ..-.|+...+.+.+.|-.|.+..|.. +.+.++...-++..-++.........+|
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~---- 202 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKME---- 202 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccc----
Confidence 999887663 1 12348888999999999999988864 3556665554543222111111111111
Q ss_pred HHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhh----HHHH
Q 017423 242 KHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVG----TVGL 317 (372)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~----~~G~ 317 (372)
.......|. =...|++-...|...+.+.++.+-.+.=.+.-+--+++++-|.++++|+-|..+ ++|+
T Consensus 203 --------~~~~K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi 273 (288)
T COG4975 203 --------KRFNKYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI 273 (288)
T ss_pred --------cchHHHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence 001111222 234466656667777777777777766666667788999999999999888766 4688
Q ss_pred HHHHHhhhhhccc
Q 017423 318 LICMLGGVMYQQS 330 (372)
Q Consensus 318 ~lil~g~~l~~~~ 330 (372)
++++.|..+....
T Consensus 274 ilivvgai~lg~~ 286 (288)
T COG4975 274 ILIVVGAILLGIA 286 (288)
T ss_pred HHHHHHhhhhhee
Confidence 8888887665443
No 76
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.96 E-value=0.017 Score=44.34 Aligned_cols=65 Identities=22% Similarity=0.139 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 109 AIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 109 ~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
.+.+..+.++-..+++.+|.+.+ .+......+.+.+.+++++||+ .++.+++++.+++.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~-~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGES-ASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHhhh
Confidence 34455567777888999999988 6667789999999999999999 99999999999999998763
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.89 E-value=0.0099 Score=45.96 Aligned_cols=62 Identities=16% Similarity=0.290 Sum_probs=49.0
Q ss_pred HHHHHHH-HHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 267 GLAISFF-GFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 267 ~~~~~~~-~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
++..++. ...++|+.+.. .+++..-+..+.+++.|+++|+|++|+.+++|+++++.|++..+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3333443 33567777654 46777778899999999999999999999999999999998754
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.87 E-value=0.017 Score=44.09 Aligned_cols=64 Identities=19% Similarity=0.169 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 110 IIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 110 ~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
+.+..+.++-..+++++|.+.+ ++......+.+++.+++++||+ .+..+++++.+.+.|++.+-
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~-l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES-LSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc-CCHHHHHHHHHHHHHHHHhh
Confidence 3344556677788999999987 7788889999999999999999 99999999999999988654
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.84 E-value=0.012 Score=45.24 Aligned_cols=64 Identities=11% Similarity=0.151 Sum_probs=50.4
Q ss_pred HHHHHHH-HHHHhcccch-hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423 267 GLAISFF-GFSCRRAISA-TGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 267 ~~~~~~~-~~~~i~~~~a-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
++..++. ...++|+.+. ..+++..-+..+.+++.|+++|+|++|+.+++|+.+++.|++..+..
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 3333443 3456677764 45677888999999999999999999999999999999999886543
No 80
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.83 E-value=0.013 Score=52.82 Aligned_cols=113 Identities=15% Similarity=0.158 Sum_probs=75.6
Q ss_pred cCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 017423 209 IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFT 287 (372)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s 287 (372)
.+-+|.+...-+.+.++++.....++.. +.+. +...+..-..+|++-.+-+..++.+.++.+.+.+-
T Consensus 8 ~gG~~~~Q~lG~t~Gali~alv~~~~~~------------p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tm 75 (269)
T PF06800_consen 8 IGGKPANQILGTTIGALIFALVVFLFRQ------------PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTM 75 (269)
T ss_pred eCCcHHHHHHHHHHHHHHHHHHHHHHhC------------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeee
Confidence 3455666665555555444333333222 1232 12345556678888888888888888888877777
Q ss_pred HHHH-HHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhcccccC
Q 017423 288 VLGI-VNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 288 ~~~~-l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~~~~ 333 (372)
.+.+ ++-+.+.++|+++|||.-+..++ +++++++.|+++.++.+++
T Consensus 76 PiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~ 126 (269)
T PF06800_consen 76 PISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK 126 (269)
T ss_pred ccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence 7665 66677889999999997765554 4888999999988877644
No 81
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.81 E-value=0.0029 Score=56.57 Aligned_cols=130 Identities=17% Similarity=0.245 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHH-HHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423 184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLE-LLIMGELKKIKHEMTTASDWYSFEVVLPVGL 262 (372)
Q Consensus 184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (372)
|++.+++|+++++...+=.||.-. .++.-..+++.. ++.+.-.. .+..+. +... .| ...
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~-~i~~~g~~v~~~~~~-----------p~f~---p~--aml 60 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCS-GIFLVGLVVNLILGF-----------PPFY---PW--AML 60 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHH-HHHHHHHHHHHhcCC-----------Ccce---eH--HHh
Confidence 677888999999988887776521 234333333332 22221111 111111 1111 11 233
Q ss_pred HHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHHH-hcCC-----CCchhhHHHHHHHHHhhhhhcccccC
Q 017423 263 SCIFGLAISFFGFSCRRAISAT-GFTVLGIVNKLLTVVINLV-IWDK-----HSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~-~~~e-----~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
+|.+-...|....-++|..|-. -..+.+..+-+.+-..|-+ +|++ .-++.+.+|++++++|..++..-|.+
T Consensus 61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 4444444555545556666533 3345555666666666654 5654 35688999999999999999876643
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.80 E-value=0.013 Score=54.28 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=82.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHH
Q 017423 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPV 260 (372)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 260 (372)
...|..+++.++++.+....++|+-..+.+.+..... .. +. + -+.++.+|..+
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~~-------~~---------~---------~l~~~~W~~G~ 57 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--SG-------GR---------S---------YLRRPLWWIGL 57 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--ch-------hh---------H---------HHhhHHHHHHH
Confidence 4579999999999999999999997655222111000 00 00 0 01122234433
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 261 GLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 261 ~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+. ..++.+.+ +.++...+++..+.++.+.-++..+++..+++|+++..+++|.++++.|..+...
T Consensus 58 ~~-~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 58 LL-MVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HH-HhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 32 23344443 4456888999999999999999999999999999999999999999999876543
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.79 E-value=0.025 Score=43.89 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 110 IIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
+.+..+.++...+++.+|.+.+..+ ....-+.+++.+++++||+ .++.++.++.++++|++++-.
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~-~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhc
Confidence 3445556677888999999998666 6688899999999999999 999999999999999987644
No 84
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.72 E-value=0.059 Score=47.49 Aligned_cols=118 Identities=18% Similarity=0.101 Sum_probs=78.4
Q ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHH-HHHHHHhhhccchhHHH
Q 017423 54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLS-LFTNSELLLHANVDTFI 132 (372)
Q Consensus 54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~ 132 (372)
+.+..|.+-..-| .-.-+..-|.++.++++.+..... ...-++++....-+..+++...- ..+.+.+++.+|.+.+.
T Consensus 163 YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 163 YIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred HHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 3445555554333 344555667777777766654221 11112333222223333333322 55678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423 133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
++.++.|.+.++.++++++|. ++..+|.++..++.+.+-.+
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999 99999999988888766433
No 85
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.46 E-value=0.0011 Score=58.37 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.=|+.|+..-+..|+++++.+-.-+.++....|+++++++|.+++|+.|..+.+|..+.+.|+++..+..
T Consensus 102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 3455566555556777888888888999999999999999999999999999999999999999987654
No 86
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.32 Score=45.18 Aligned_cols=72 Identities=13% Similarity=0.200 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
+..-+++-.+.|..+|.++++.+|.++++..-++...+.+++.++++++++..||...++-..|+.+.+...
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 444555666677778889999999999999999999999999999999999999999999999999888433
No 87
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.14 E-value=0.024 Score=42.62 Aligned_cols=54 Identities=9% Similarity=0.145 Sum_probs=29.3
Q ss_pred HHHHHHH-HHHHhcccchhHH-HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHH
Q 017423 267 GLAISFF-GFSCRRAISATGF-TVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLIC 320 (372)
Q Consensus 267 ~~~~~~~-~~~~i~~~~a~~~-s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li 320 (372)
++..++. ...++|+.+.... .+..-+..+.+++.|.++|||++|+.+++|+.+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3444443 4467888877665 5566689999999999999999999999999875
No 88
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.51 E-value=0.83 Score=37.31 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423 183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL 262 (372)
Q Consensus 183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (372)
..+++.+.+..+-.++.-..-++.+..+ +|.--.+.+...+...+....+.....+... .....+ +| ...
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a------~~~~~p-wW--~~~ 74 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA------AVASAP-WW--AWI 74 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh------hccCCc-hH--HHH
Confidence 4556677777777777777777766533 4655555555555433333322222211110 011112 23 345
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHH-HHHHHHHHHHHh-cC---CCCchhhHHHHHHHHHhhhhhccc
Q 017423 263 SCIFGLAISFFGFSCRRAISATGFTVLGIV-NKLLTVVINLVI-WD---KHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l-~~v~~~~ls~~~-~~---e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
.|++|..+-........+.+++++..+... +-+.+.+++.+= +| .+++...++|++++++|+++.++.
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 577777777766777889988877665554 444555666652 33 489999999999999996665544
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.48 E-value=0.073 Score=39.99 Aligned_cols=55 Identities=20% Similarity=0.259 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHH
Q 017423 111 IFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATI 166 (372)
Q Consensus 111 ~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~ 166 (372)
.+..+.++...+++++|.+.+ .+...+..+.+.+.+.+++||+ .+..++.++.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~-~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES-LSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhheeeC
Confidence 455667788889999999998 5567799999999999999999 899999988753
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.28 E-value=0.087 Score=40.87 Aligned_cols=71 Identities=21% Similarity=0.212 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 101 TVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
.++...|..+ +..+....+..+...+.|.+.-+ ++++=+++++.++++ +|+..+++++.|+.+.+.|+.+.
T Consensus 41 n~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l-ge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 41 NPKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL-GEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred hHHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh-cCcccchhHHHHHHHHHcCeeee
Confidence 4555565554 44444456777888999998766 588889999999655 66658889999999999998764
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.73 E-value=1.8 Score=34.98 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=72.7
Q ss_pred HHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcc-cccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 017423 56 IINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFL-EHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVF 134 (372)
Q Consensus 56 ~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii 134 (372)
..|-..-+...-|+.-++.-+..+.+.+.++.....+ +.+..+.-+++ ...-|++....+.++......+.++.+..+
T Consensus 18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 3344333444448888888888888777665544322 22222222333 334677777778888888888877777554
Q ss_pred H-HHHHHHHHHHHHH----HcCCCCCCHhHHHHHHHHhhhhhh
Q 017423 135 R-SAVPIFVAIGETL----FLHQPWPSIKTWLSLATIFGGSVI 172 (372)
Q Consensus 135 ~-~~~pi~v~~~~~l----~l~~~~~~~~~~~~~~~~~~Gv~l 172 (372)
. ..+-+...++..+ .-+++ .++++.+++++++.|+.+
T Consensus 97 ~~~GQl~~sl~iD~fG~fg~~~~~-~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IVAGQLIASLLIDHFGLFGAPKRP-FSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHccccCCCCCC-CCHHHHHHHHHHHHHHhC
Confidence 4 4455566666653 23455 889999999999999864
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.70 E-value=0.02 Score=50.17 Aligned_cols=131 Identities=12% Similarity=0.112 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423 184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS 263 (372)
Q Consensus 184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
+++.+++=++.|+..-....| .+-+|.+...-+.+.++++....+++..+ .. +...++.-..+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k----~GG~p~qQ~lGtT~GALifaiiv~~~~~p------------~~-T~~~~iv~~is 65 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANK----FGGKPYQQTLGTTLGALIFAIIVFLFVSP------------EL-TLTIFIVGFIS 65 (288)
T ss_pred hHHHHHHHHHHhcccceeeee----cCCChhHhhhhccHHHHHHHHHHheeecC------------cc-chhhHHHHHHh
Confidence 466777788888865555444 33456666666655554443333322111 11 22234445567
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhcccc
Q 017423 264 CIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQST 331 (372)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~~ 331 (372)
|.+-.+-+..++.+++..+.+.+..+.+ .+-+-+.++|++.|||..+..+. +..++++.|+++.++.+
T Consensus 66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence 7777777777888888777766666555 56777889999999998777664 45677888888777665
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.39 E-value=0.13 Score=48.03 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
+-|.+-++.+|....+++.++.+..+++....-+++..+|.++-+|++|+...++.++.++|+++.+..+.+
T Consensus 164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence 345555666777777889999999999999999999999999999999999999999999999999887643
No 94
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.34 E-value=0.66 Score=40.78 Aligned_cols=59 Identities=10% Similarity=0.037 Sum_probs=50.7
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhh
Q 017423 113 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVI 172 (372)
Q Consensus 113 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l 172 (372)
..+-.+....++|.+.....+...+.++++.+++.++++++ ++..++.+..+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEe
Confidence 33334456678999999999999999999999999999998 999999999999988754
No 95
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.64 E-value=2.7 Score=39.09 Aligned_cols=143 Identities=12% Similarity=0.081 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHH-HHhHHHHHHHHHHHHH--hhhHHHHHHhhhcccccchhHHHH
Q 017423 182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVL-YNNLEALLLFPLELLI--MGELKKIKHEMTTASDWYSFEVVL 258 (372)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 258 (372)
..|+++..++.+|.+.+.+-.||.- .=.|+..+ .+.+++-+++|..... ..++.+...+ .+ .. .+.
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~---~~---~~-~l~ 74 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA---TP---AS-TLF 74 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh---CC---hh-HHH
Confidence 4699999999999999999888762 22444443 2344555555655322 2333333221 11 11 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcC-------CCCchhhHHHHHHHHHhhhhhccc
Q 017423 259 PVGLSCIFGLAISFFGFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWD-------KHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~-------e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
.....|++--+-+..+-..+|+++-+ ..++..-+-.++++++-.++.+ .+-....++|.+++++|+.+..+.
T Consensus 75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 22222332222222233456776643 3344444555555555444432 344557899999999999988765
Q ss_pred ccCCC
Q 017423 331 TSNKP 335 (372)
Q Consensus 331 ~~~~~ 335 (372)
...|+
T Consensus 155 G~~Ke 159 (344)
T PF06379_consen 155 GSMKE 159 (344)
T ss_pred HHhhh
Confidence 54433
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.55 E-value=3.8 Score=37.40 Aligned_cols=130 Identities=12% Similarity=0.020 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHhhcCccccc-----ccchhhhHHHHHHHHHHHHH
Q 017423 42 GVAAGYCISASLLSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCGYFKFLEHD-----ALELLTVWRFLPAAIIFYLS 115 (372)
Q Consensus 42 ~~~~~~~~~~~~~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 115 (372)
++...|.++=+..+..++.+..++.. ++.+.+.--+...+.-.........-.+ +...+.++.++..+.++..+
T Consensus 175 ~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavG 254 (327)
T KOG1581|consen 175 LLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVG 254 (327)
T ss_pred HHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhh
Confidence 44566666665566777777776553 3322222222222222221111101111 12334577788888888877
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhh
Q 017423 116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVI 172 (372)
Q Consensus 116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l 172 (372)
..+-+..++.-.+=..+++..+-=++.++++.++++++ .++.+|+++.+.++|...
T Consensus 255 Q~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~-~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 255 QLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHP-LSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCc-cchhhccCeeeehHHHHH
Confidence 65555555544455556666677788888999999999 899999999988888653
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=91.78 E-value=0.42 Score=37.12 Aligned_cols=53 Identities=8% Similarity=0.053 Sum_probs=42.5
Q ss_pred HHHHhcccchhHHHHH-HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423 274 GFSCRRAISATGFTVL-GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l 326 (372)
+++.+++.+-+....+ +.+.-+++++.|+++.+|..+...++|+++++.|+.+
T Consensus 58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 4455677766655555 5788899999999888888899999999999999864
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.47 E-value=4.7 Score=37.05 Aligned_cols=139 Identities=18% Similarity=0.199 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCch-hHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423 183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTW-GLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG 261 (372)
Q Consensus 183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (372)
..+..++..+++..+-.+..|.++..++.+.. .++.+|++.+++.+...-. .+ ..+ .+..+|....-|+-+
T Consensus 12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~----lv~--~~~l~~~~~kk~~P~- 83 (314)
T KOG1444|consen 12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LG----LVN--FRPLDLRTAKKWFPV- 83 (314)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hc----eee--cCCcChHHHHHHccH-
Confidence 34666667777777777888888887776444 3445787766433222211 11 100 111234333334322
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.++-.+.-++....+++.+-....++-...++.+.+...++|+..++...+.....+++|...+....
T Consensus 84 --~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d 151 (314)
T KOG1444|consen 84 --SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD 151 (314)
T ss_pred --HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc
Confidence 22223333445567899999999999999999999999999999999999999999999988765443
No 99
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=91.12 E-value=0.31 Score=41.33 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=57.3
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 270 ISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 270 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.+|.+..++++.+|+..+.+...+..+.-++++++++|.+....++..++.+.|+.+..+..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 57777889999999999999999999999999999999999999999999999998877655
No 100
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.04 E-value=0.63 Score=40.67 Aligned_cols=71 Identities=7% Similarity=0.174 Sum_probs=56.5
Q ss_pred HHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 264 CIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 264 ~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
+-..++.+.. ...+++..+=-|--+--..+|+...++|+++.+..-+|.......+|++|++++.+...|.
T Consensus 91 cs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 91 CSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 3334444443 5567788777777777788999999999999999999999999999999999998875443
No 101
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.50 E-value=0.27 Score=45.02 Aligned_cols=119 Identities=14% Similarity=0.202 Sum_probs=79.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHH
Q 017423 180 FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLP 259 (372)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 259 (372)
.+..|.++.+.+++.-+...++.|+-.++.+....+ . -.|..+- ...+.+|..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--a---------------~~gg~~y----------l~~~~Ww~G 70 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--A---------------GEGGYGY----------LKEPLWWAG 70 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--c---------------cCCCcch----------hhhHHHHHH
Confidence 345688888888888888888888876552110000 0 0011000 011223332
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423 260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+ ....+|=+.||..| ...+++..+.++.+.-+.+.+++..+++|++++...+|++++++|..+...
T Consensus 71 ~-ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 71 M-LTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred H-HHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 2 23334555555544 778889999999999999999999999999999999999999999765443
No 102
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=89.41 E-value=0.11 Score=46.37 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHH-HHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017423 132 IVFRSAVPIFVAIG-ETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--QFTVMAYSWALAYLVSMTIDFVYIKHVVMT 208 (372)
Q Consensus 132 ~ii~~~~pi~v~~~-~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 208 (372)
+++.+...+.++++ -.++||||..-..-.+.++++.+-..+...... +.-+.|+++.++.++..-.-.+|. .++++
T Consensus 53 ~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym-~lLr~ 131 (381)
T PF05297_consen 53 TVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYM-WLLRE 131 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 34444443333332 224557775555555555555555554444432 344568877666655544444553 36777
Q ss_pred cCCCchhHHHHHh
Q 017423 209 IGLNTWGLVLYNN 221 (372)
Q Consensus 209 ~~~~~~~~~~~~~ 221 (372)
++.+.|+++.+..
T Consensus 132 ~GAs~WtiLaFcL 144 (381)
T PF05297_consen 132 LGASFWTILAFCL 144 (381)
T ss_dssp -------------
T ss_pred hhhHHHHHHHHHH
Confidence 8888888875443
No 103
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=86.26 E-value=2.5 Score=39.24 Aligned_cols=120 Identities=15% Similarity=0.052 Sum_probs=77.6
Q ss_pred HHHHHHHHHHc--c--CCchHHHHHHHHHHHHHHHH-HHhhc--Cccc----ccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017423 53 LLSIINKWAIM--K--FPYPGALTALQYFTSAAGVL-LCGYF--KFLE----HDALELLTVWRFLPAAIIFYLSLFTNSE 121 (372)
Q Consensus 53 ~~~~~~K~~l~--~--~~~p~~l~~~r~~~~~i~~~-~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (372)
.-.+..|..+. + .+ ++.+...+--++.+.++ ..... +... ....+.. ...+...+++..+-....+.
T Consensus 177 l~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~ 254 (316)
T KOG1441|consen 177 LRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFL 254 (316)
T ss_pred HHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHH
Confidence 45666677773 3 44 77777777666665555 32222 1111 0011112 22333333333433455566
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 122 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 122 al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
.+..+++=++++...+.=+++.+.++++++++ .++.+.+|..+++.|+.+...
T Consensus 255 ~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~p-vt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 255 VIGRTSALTYSVAGHMKRIVVIVVSWLIFGNP-VTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHcccCchhhhhhccceEEEEEEeEeeeecCC-CchhhHHHHHHHHHHHHHHHH
Confidence 78889999999999999889999999999996 899999999999999887654
No 104
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=85.74 E-value=7.3 Score=34.00 Aligned_cols=122 Identities=11% Similarity=0.115 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhc-Cccccc----ccchhhhHHHHHHHHHHHHHHH
Q 017423 45 AGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYF-KFLEHD----ALELLTVWRFLPAAIIFYLSLF 117 (372)
Q Consensus 45 ~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 117 (372)
..-|.++....+..|.-.+ ++. -..-.++.-+.+..+++.+.+. +..... .++.+....++.-|+..++..+
T Consensus 161 ~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy 239 (309)
T COG5070 161 FTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY 239 (309)
T ss_pred ehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence 4556666656666666653 333 4445566666666555554432 211111 1222333455555666666677
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhh
Q 017423 118 TNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG 168 (372)
Q Consensus 118 ~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~ 168 (372)
++-+.++-++...+.++.++--...++-+.+++++. .+...+.++++++.
T Consensus 240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap-~nf~si~sillGfl 289 (309)
T COG5070 240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAP-VNFLSIFSILLGFL 289 (309)
T ss_pred ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCc-hhHHHHHHHHHHHH
Confidence 777788888888899998888888888887888887 66666666555443
No 105
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.37 E-value=26 Score=28.72 Aligned_cols=117 Identities=12% Similarity=0.117 Sum_probs=65.7
Q ss_pred HHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc--hh-hhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423 55 SIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE--LL-TVWRFLPAAIIFYLSLFTNSELLLHANVDTF 131 (372)
Q Consensus 55 ~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 131 (372)
.-.|--.-+....|+.-.+.-+.++.+++..+.+.+ .+.+... .+ +++. ...|+++...+..+......+.+...
T Consensus 21 ~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p~lGa~~t 98 (150)
T COG3238 21 AAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAPRLGAATT 98 (150)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHH-HHccchhhhhhhhhHHhccchhHHHH
Confidence 334444444455588888888888777666555442 2222222 23 3333 33344444444444455555544444
Q ss_pred -HHHHHHHHHHHHHHHHHHc----CCCCCCHhHHHHHHHHhhhhhhee
Q 017423 132 -IVFRSAVPIFVAIGETLFL----HQPWPSIKTWLSLATIFGGSVIYV 174 (372)
Q Consensus 132 -~ii~~~~pi~v~~~~~l~l----~~~~~~~~~~~~~~~~~~Gv~l~~ 174 (372)
.++...+-+.-+++..+=+ +++ .+..+++++++.++|+.+..
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhc
Confidence 4455555556666554322 344 89999999999999965543
No 106
>PRK02237 hypothetical protein; Provisional
Probab=81.24 E-value=5.2 Score=30.55 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 285 GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 285 ~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..+.++-+=.+.+++.++.+-+.+++.+.++|.+++++|+.+.....
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34555556667888999999999999999999999999987765543
No 107
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.60 E-value=17 Score=27.24 Aligned_cols=63 Identities=13% Similarity=0.255 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHH---hcccchhHHHH--HHHHHHHHHH----HHHHHhcCCCCchhhHHHHHHHHHhhhhh
Q 017423 265 IFGLAISFFGFSC---RRAISATGFTV--LGIVNKLLTV----VINLVIWDKHSTWVGTVGLLICMLGGVMY 327 (372)
Q Consensus 265 ~~~~~~~~~~~~~---i~~~~a~~~s~--~~~l~~v~~~----~ls~~~~~e~~t~~~~~G~~lil~g~~l~ 327 (372)
+....+++..|.. -.|+|-...|. +-.++.+++. .+|+++++|++.+..+.|.+++.+|+...
T Consensus 42 ~~SWGIA~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 42 LASWGIAFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHhhHHHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3344455554433 23444444333 2335555553 56888999999999999999998887653
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=79.08 E-value=5.7 Score=30.28 Aligned_cols=46 Identities=13% Similarity=0.225 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
++.++-+=.+.+.+.++.+-+++++.+.++|.++++.|+.+..+..
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 3445556668889999999999999999999999999988766544
No 109
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=74.28 E-value=3.1 Score=33.55 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhh
Q 017423 294 KLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY 327 (372)
Q Consensus 294 ~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~ 327 (372)
-++-+.+|.+.+++ -....++|..+.+.|++..
T Consensus 71 Glfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 71 GLFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Confidence 33444455555554 3344555666666676543
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.90 E-value=4.7 Score=30.62 Aligned_cols=29 Identities=7% Similarity=0.042 Sum_probs=25.1
Q ss_pred HHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423 298 VVINLVIWDKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 298 ~~ls~~~~~e~~t~~~~~G~~lil~g~~l 326 (372)
+.+++++++|++++.+..|.+++++++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 36788899999999999999999888653
No 111
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=73.89 E-value=8.3 Score=34.91 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=47.9
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
.|..+..++++...+.---..+++-+++..+++.+++..+|+|+..+.+|++.....
T Consensus 103 m~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 103 MYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 344556778888888877788899999999999999999999999999998876543
No 112
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=72.74 E-value=51 Score=32.08 Aligned_cols=48 Identities=6% Similarity=0.128 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-CCchhhHHHHHHHHHhhhhhcccccCC
Q 017423 286 FTVLGIVNKLLTVVINLVIWDK-HSTWVGTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 286 ~s~~~~l~~v~~~~ls~~~~~e-~~t~~~~~G~~lil~g~~l~~~~~~~~ 334 (372)
.++=+.+-|+++.+ +++.++- .-..--.-|++.++.|++++.+.|.++
T Consensus 162 hNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 162 HNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred hhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 34444455555544 5555542 233334567788888888887776443
No 113
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=71.15 E-value=0.95 Score=40.57 Aligned_cols=55 Identities=15% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHhcccchhHHHHHHHHHH----HHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 274 GFSCRRAISATGFTVLGIVNK----LLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~----v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
+++.+++.+|+...++.+.-. ++-.++++++=...+|...=+=-.+.+++++.+.
T Consensus 125 Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWl 183 (381)
T PF05297_consen 125 YMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWL 183 (381)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999998887765332 2333444443333444433333345556655443
No 114
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=68.88 E-value=0.3 Score=44.35 Aligned_cols=67 Identities=12% Similarity=-0.002 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-----cchhHHHHHHHHHHHHHHHHHHHhcCCCCc--hhhHHHHHHHHHhhhhhc
Q 017423 257 VLPVGLSCIFGLAISFFGFSCRRA-----ISATGFTVLGIVNKLLTVVINLVIWDKHST--WVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~i~~-----~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t--~~~~~G~~lil~g~~l~~ 328 (372)
+......|++-.+.+...-+++.. +-|...+ +.-++++++-++ ++.+.+ ..-+.|.+++++++.+-.
T Consensus 72 v~~A~aGGvvfnlgNillq~aia~aGmSVafpvg~g----lalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 72 VLFAMAGGVVFNLGNILLQAAIAFAGMSVAFPVGIG----LALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HHHHHHhhHhhhhHHHHHHHHHHHhcceeeeeeecc----eEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 334555666666666653333332 2333322 222334444332 344444 355678888888876643
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.69 E-value=19 Score=27.35 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 289 LGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 289 ~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
++-+=.+.+.+..+.+=+..++.+.++|.+++++|+.+.....
T Consensus 64 YGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 64 YGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 4445557788888888899999999999999999987665543
No 116
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=67.15 E-value=3.9 Score=32.20 Aligned_cols=7 Identities=29% Similarity=0.577 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 017423 316 GLLICML 322 (372)
Q Consensus 316 G~~lil~ 322 (372)
|++++++
T Consensus 76 GvIg~Il 82 (122)
T PF01102_consen 76 GVIGIIL 82 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 117
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=65.84 E-value=12 Score=28.41 Aligned_cols=69 Identities=17% Similarity=-0.012 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 103 WRFLPAAIIFYLSLFTNSELLLHANVDTFI-VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
..+.|.. +...+....+..++..+.+.+. +-++++-+|+.+++. .+||+....+..++..+.+.|+.+.
T Consensus 54 ~Y~iPFl-lNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~-~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 54 EYLIPFL-LNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGK-ALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHH-HHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHH-HhccccccceeehhhhHHhhhhhhe
Confidence 3444444 3334444556677888888773 556778889999995 5688867777888999999887654
No 118
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=62.64 E-value=85 Score=27.06 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=15.5
Q ss_pred HHHHHhcCCCCchhhHHHHHHHHH
Q 017423 299 VINLVIWDKHSTWVGTVGLLICML 322 (372)
Q Consensus 299 ~ls~~~~~e~~t~~~~~G~~lil~ 322 (372)
.+|..++++..=+-..+|.++.++
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLvA 157 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLVA 157 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446667777666777777766443
No 119
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=60.83 E-value=2.6 Score=37.46 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423 265 IFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
++-.-.||....+.++++-+....+..-..+...+++|++++.+-.+.++.|.+++++|+.+....
T Consensus 86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 333344555556678999999999999999999999999999999999999999999998876543
No 120
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=55.34 E-value=88 Score=28.43 Aligned_cols=78 Identities=12% Similarity=-0.010 Sum_probs=49.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423 99 LLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD 177 (372)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~ 177 (372)
++.....+..++...+++.+.-.-.+.-.+..+..+...--..+.+++++++.+. .+-...-+.++.+.|+.+=..++
T Consensus 257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKP-fT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKP-FTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCc-hHHHHhhhhHHHHHHHHhhcccC
Confidence 3444444555555554444333334445666677777777778889999999888 67666667777788877655444
No 121
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=55.05 E-value=1.9e+02 Score=27.27 Aligned_cols=227 Identities=15% Similarity=0.075 Sum_probs=109.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHH-------cCCCCCCHhHHHHHHHHhhhhh
Q 017423 100 LTVWRFLPAAIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLF-------LHQPWPSIKTWLSLATIFGGSV 171 (372)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~-------l~~~~~~~~~~~~~~~~~~Gv~ 171 (372)
+........|++-..+-...-.+.+|+.++.- .+...++-.+=.++-.++ +.++ -....++++++.++|++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~-~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATP-SGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCC-CchhhhhHHHHHHHHHH
Confidence 34444444555433333334456677666654 222333333333333233 2333 34567889999999999
Q ss_pred heeecc-----------cccch-HHHHHHHHHHHHHHHHHHHHHH---H---hhccCCCchhHH--HHHh--HHHHHHHH
Q 017423 172 IYVLTD-----------YQFTV-MAYSWALAYLVSMTIDFVYIKH---V---VMTIGLNTWGLV--LYNN--LEALLLFP 229 (372)
Q Consensus 172 l~~~~~-----------~~~~~-~G~~~~l~a~~~~a~~~i~~k~---~---~~~~~~~~~~~~--~~~~--~~~~~~~~ 229 (372)
+..... .+++. .|++.++++-+..+++++=... + ..+.+.+++-.. .|.. ..+.+...
T Consensus 150 i~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~ 229 (344)
T PF06379_consen 150 ICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL 229 (344)
T ss_pred HHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH
Confidence 875421 12333 4999999998888887773321 1 112223332111 0110 01122222
Q ss_pred HHHHHh-hhHHHHHHhhhcccccch--hHHHHHHHHHHHHHHHHHHHHHHHhcc----cchhHHHHHHHHHHHHHHHHHH
Q 017423 230 LELLIM-GELKKIKHEMTTASDWYS--FEVVLPVGLSCIFGLAISFFGFSCRRA----ISATGFTVLGIVNKLLTVVINL 302 (372)
Q Consensus 230 ~~~~~~-g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~a~~~s~~~~l~~v~~~~ls~ 302 (372)
.+.+.. -.-.+. ....++..-.+ ..-.+..+..|++-+...+.+-+.-.+ .+.....+.+.+.-+++-+.|.
T Consensus 230 ~yc~~~l~~~k~~-s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl 308 (344)
T PF06379_consen 230 IYCLILLAKNKNW-SWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL 308 (344)
T ss_pred HHHHHHHhhcCCC-ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence 221110 000000 00001100001 111223344555544444433333333 3466777788888888888887
Q ss_pred HhcCC------CCchhhHHHHHHHHHhhhhhcc
Q 017423 303 VIWDK------HSTWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 303 ~~~~e------~~t~~~~~G~~lil~g~~l~~~ 329 (372)
+++| +.-..-++|+++++.++.+..+
T Consensus 309 -~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 309 -ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred -HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 4555 2334568888888888776544
No 122
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=51.89 E-value=9.6 Score=26.27 Aligned_cols=22 Identities=9% Similarity=0.233 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHhhhhhcccccC
Q 017423 312 VGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 312 ~~~~G~~lil~g~~l~~~~~~~ 333 (372)
.-++++.+++.|.++|....++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3467888889999998766534
No 123
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=48.71 E-value=1.5e+02 Score=24.22 Aligned_cols=68 Identities=13% Similarity=-0.033 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHcCCCCCCHhHHHHHHHHh-----hhhhhe-----eecccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 017423 139 PIFVAIGETLFLHQPWPSIKTWLSLATIF-----GGSVIY-----VLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVV 206 (372)
Q Consensus 139 pi~v~~~~~l~l~~~~~~~~~~~~~~~~~-----~Gv~l~-----~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~ 206 (372)
-.++....++++|+|+.-++.++...++- ...... .....+....+++..+++++.|.-|....||+-
T Consensus 67 ~~~~l~~~~lffkr~~~~P~~~I~~ll~~v~~~~l~~~~~~~~~~~~~~d~~~i~~l~~~li~a~IwipYf~~S~RVK 144 (149)
T PF10754_consen 67 WLFTLWLLYLFFKRKRRFPKLYIIWLLISVLFIALDAFAFSYIFPSPVIDAEAIRELLRSLIAAAIWIPYFLRSKRVK 144 (149)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 35555566667777645555555322111 111111 111122345688889999999999999999873
No 124
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=45.95 E-value=93 Score=30.69 Aligned_cols=22 Identities=5% Similarity=-0.133 Sum_probs=18.5
Q ss_pred CchhhHHHHHHHHHhhhhhccc
Q 017423 309 STWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 309 ~t~~~~~G~~lil~g~~l~~~~ 330 (372)
++..|++++.++++|++++.+.
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999998776543
No 125
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=44.12 E-value=22 Score=24.19 Aligned_cols=22 Identities=9% Similarity=0.292 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhhhcccccCCC
Q 017423 314 TVGLLICMLGGVMYQQSTSNKP 335 (372)
Q Consensus 314 ~~G~~lil~g~~l~~~~~~~~~ 335 (372)
.+=+.+++.|++++.+++.+|.
T Consensus 15 t~~~~l~fiavi~~ayr~~~K~ 36 (60)
T COG4736 15 TIAFTLFFIAVIYFAYRPGKKG 36 (60)
T ss_pred HHHHHHHHHHHHHHHhcccchh
Confidence 3445677888888888775543
No 126
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=43.83 E-value=4.3e+02 Score=28.13 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
-+.++..++|+-++.++.....+| ...+.+.+.+..++|.+-+
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~-~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKK-GGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHh
Confidence 345677888998888887765444 3334566666666675543
No 127
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=41.11 E-value=24 Score=25.79 Aligned_cols=27 Identities=11% Similarity=-0.014 Sum_probs=22.1
Q ss_pred CCCchhhHHHHHHHHHhhhhhcccccC
Q 017423 307 KHSTWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 307 e~~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
-..++..++|++++++|..+|..++.+
T Consensus 3 ~~~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 3 FGFGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 357889999999999999999765533
No 128
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=37.83 E-value=44 Score=19.26 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=11.9
Q ss_pred CCchhhHHHHHHHHHhhhhhc
Q 017423 308 HSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 308 ~~t~~~~~G~~lil~g~~l~~ 328 (372)
.-++..++|++++.++.+++.
T Consensus 9 ~~~~~~~~G~~l~~~~~~~~~ 29 (34)
T TIGR01167 9 GNSLLLLLGLLLLGLGGLLLR 29 (34)
T ss_pred ccHHHHHHHHHHHHHHHHHhe
Confidence 445667778755555444433
No 129
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=36.75 E-value=3e+02 Score=24.38 Aligned_cols=15 Identities=33% Similarity=0.487 Sum_probs=7.1
Q ss_pred chhHHHHHhHHHHHH
Q 017423 213 TWGLVLYNNLEALLL 227 (372)
Q Consensus 213 ~~~~~~~~~~~~~~~ 227 (372)
++..+.|..+.++++
T Consensus 193 ~~~~~vya~lgAllf 207 (237)
T KOG2322|consen 193 PILVMVYAALGALLF 207 (237)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555555433
No 130
>COG3329 Predicted permease [General function prediction only]
Probab=35.23 E-value=2.8e+02 Score=25.75 Aligned_cols=22 Identities=9% Similarity=0.006 Sum_probs=9.5
Q ss_pred HhhhhhhccCcCCCccchhhhc
Q 017423 350 QRKLLEMQNNTETNNKEKEVVE 371 (372)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ 371 (372)
+.++++.+.++.++.++.+.||
T Consensus 188 ~ssr~~~~~~~~~ed~~v~~~e 209 (372)
T COG3329 188 ASSRQEYLSPQWGEDNRVKIWE 209 (372)
T ss_pred hhhhhhhcccccCcccchhhHH
Confidence 3344444444444444444443
No 131
>PF14150 YesK: YesK-like protein
Probab=34.43 E-value=1.8e+02 Score=21.11 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=18.1
Q ss_pred HHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhH
Q 017423 199 FVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGEL 238 (372)
Q Consensus 199 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (372)
+.+.||..++++ ..+.+.....+.++...+...+.-|.|
T Consensus 16 S~~lr~r~p~k~-~~~il~~ililis~~~v~~S~f~vGGw 54 (81)
T PF14150_consen 16 SVLLRKRFPKKQ-PEIILPLILILISLLTVLISIFLVGGW 54 (81)
T ss_pred HHHHHHhCCCcc-hhHHHHHHHHHHHHHHHHHHHheEcch
Confidence 345666554433 222333233444555556665544543
No 132
>PHA03049 IMV membrane protein; Provisional
Probab=34.31 E-value=38 Score=23.33 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHhhhhhcccccC
Q 017423 312 VGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 312 ~~~~G~~lil~g~~l~~~~~~~ 333 (372)
...+++.+++.|.++|....++
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk 26 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3467788888899988766533
No 133
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=34.10 E-value=61 Score=26.31 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=19.9
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHh
Q 017423 278 RRAISATGFTVLGIVNKLLTVVINLVI 304 (372)
Q Consensus 278 i~~~~a~~~s~~~~l~~v~~~~ls~~~ 304 (372)
+..-+....+.+.|+-|.++.+++.++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888888888877776665
No 134
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=33.85 E-value=4.4e+02 Score=25.40 Aligned_cols=24 Identities=8% Similarity=0.229 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHhcccchhH
Q 017423 262 LSCIFGLAISFFGFSCRRAISATG 285 (372)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~a~~ 285 (372)
.....+....+..++.+++....+
T Consensus 356 ~~~~~~~~~s~i~~~~l~~~~~LR 379 (399)
T PF00909_consen 356 VILAWSFVVSYIIFKILKKFGGLR 379 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-SB
T ss_pred HHHHHHHHHHHHHHHHHHhccccC
Confidence 334444444444455555554433
No 135
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=33.62 E-value=86 Score=24.00 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeec
Q 017423 139 PIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLT 176 (372)
Q Consensus 139 pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~ 176 (372)
.+...+..+.+-|++ +++..+++..+++.|+.++...
T Consensus 68 I~~Sl~W~w~vdg~~-Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 68 IVASLLWGWLVDGVR-PDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHHHHHhhhcCcC-CChHHHHhHHHHHHhHHheEec
Confidence 344455666777888 9999999999999999887653
No 136
>PRK02237 hypothetical protein; Provisional
Probab=33.06 E-value=89 Score=23.99 Aligned_cols=36 Identities=11% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423 139 PIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL 175 (372)
Q Consensus 139 pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~ 175 (372)
.+...+..+.+-|.| +++..+.+..+++.|+.++..
T Consensus 70 I~~Sl~W~w~vdg~~-Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 70 VAGSLLWLWVVDGVR-PDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHhcCcC-CChhHHHhHHHHHHhHHHhee
Confidence 334446677788888 999999999999999987654
No 137
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=32.89 E-value=4.8e+02 Score=25.54 Aligned_cols=16 Identities=13% Similarity=0.021 Sum_probs=8.0
Q ss_pred hHHHHHHHHHhhhhhc
Q 017423 313 GTVGLLICMLGGVMYQ 328 (372)
Q Consensus 313 ~~~G~~lil~g~~l~~ 328 (372)
..++.+++++..+.|.
T Consensus 178 F~~a~~v~l~~i~~~~ 193 (437)
T TIGR00939 178 FGTPCVVQLICIVCYL 193 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444555555555553
No 138
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=32.87 E-value=1.4e+02 Score=27.60 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=46.7
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
..|.++.+.-+.+.+.-.-.+++..++|.++==|+++|.-..-..+|-+|+++..+..
T Consensus 101 SN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 101 SNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred ccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 4566788888888888888888888888877778888888888888888888877644
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=32.42 E-value=25 Score=28.50 Aligned_cols=24 Identities=8% Similarity=0.020 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhhhhcccccCCCcc
Q 017423 314 TVGLLICMLGGVMYQQSTSNKPKA 337 (372)
Q Consensus 314 ~~G~~lil~g~~l~~~~~~~~~~~ 337 (372)
+++.+|++..++++.+.|+|+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 445555566666666655454443
No 140
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.22 E-value=1.9e+02 Score=21.82 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=24.9
Q ss_pred HHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 143 AIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 143 ~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
+.++.+.+||. .++..+.+..++.+|+.++
T Consensus 84 v~Fsvfyl~ep-l~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEP-LRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCc-chHHHHHHHHHHHHHHHHh
Confidence 45788899999 8999999988888887764
No 141
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=30.90 E-value=4.5e+02 Score=25.61 Aligned_cols=40 Identities=3% Similarity=0.050 Sum_probs=21.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Q 017423 280 AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI 319 (372)
Q Consensus 280 ~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l 319 (372)
..+=.+.-+.+.+.=+++..++=.+++..++...|++...
T Consensus 137 ~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~ 176 (412)
T PF01306_consen 137 GFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAA 176 (412)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHH
Confidence 3344444555555555555444445555566667766543
No 142
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=29.97 E-value=4.1e+02 Score=23.82 Aligned_cols=43 Identities=12% Similarity=0.007 Sum_probs=26.3
Q ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Q 017423 276 SCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLL 318 (372)
Q Consensus 276 ~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~ 318 (372)
.|.++-++......+.++-..-++...+++.-..+.....+++
T Consensus 114 vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~i 156 (249)
T PF10225_consen 114 VCYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAAI 156 (249)
T ss_pred hhcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 3456777777777777777777766666665444444444443
No 143
>COG1971 Predicted membrane protein [Function unknown]
Probab=28.97 E-value=85 Score=26.82 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH-HHHhhh
Q 017423 283 ATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI-CMLGGV 325 (372)
Q Consensus 283 a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l-il~g~~ 325 (372)
+.+.+++....|+++..++.++-+-.-.+-+|+|.++ ++.|..
T Consensus 40 a~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~ 83 (190)
T COG1971 40 ALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLK 83 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777778888888888877666667788777654 445543
No 144
>PRK15432 autoinducer 2 ABC transporter permease LsrC; Provisional
Probab=28.38 E-value=1.2e+02 Score=28.72 Aligned_cols=23 Identities=13% Similarity=0.052 Sum_probs=15.1
Q ss_pred CchhhHHHHHHHHHhhhhhcccc
Q 017423 309 STWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 309 ~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
-.+...++.+++++.+++..+.+
T Consensus 286 ~~~~~ii~g~lll~vl~~~~~~~ 308 (344)
T PRK15432 286 AWWNDFIAGLVLLGVLVFDGRLR 308 (344)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHH
Confidence 34667777777777776655444
No 145
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=27.64 E-value=57 Score=21.02 Aligned_cols=22 Identities=27% Similarity=0.409 Sum_probs=15.6
Q ss_pred hHHHHHHHHHhhhhhcccccCC
Q 017423 313 GTVGLLICMLGGVMYQQSTSNK 334 (372)
Q Consensus 313 ~~~G~~lil~g~~l~~~~~~~~ 334 (372)
..+-+.++++|+++|.+.++++
T Consensus 15 ~l~~~~~~Figiv~wa~~p~~k 36 (48)
T cd01324 15 GLLYLALFFLGVVVWAFRPGRK 36 (48)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 3334578889999999887443
No 146
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.90 E-value=1.3e+02 Score=23.06 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHh---cCCCCchhhHHHHHHHHHhhhhhccc
Q 017423 293 NKLLTVVINLVI---WDKHSTWVGTVGLLICMLGGVMYQQS 330 (372)
Q Consensus 293 ~~v~~~~ls~~~---~~e~~t~~~~~G~~lil~g~~l~~~~ 330 (372)
..++++.+||++ +|.. .|.-+++.++-+++.++..++
T Consensus 55 GilVGa~iG~llD~~agTs-PwglIv~lllGf~AG~lnv~R 94 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTS-PWGLIVFLLLGFGAGVLNVLR 94 (116)
T ss_pred HHHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHH
Confidence 345666777764 3322 244444444444444444443
No 147
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=26.03 E-value=74 Score=25.35 Aligned_cols=49 Identities=18% Similarity=0.118 Sum_probs=26.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhcCC--CCchhhHHHHHHHHHhhhhh
Q 017423 279 RAISATGFTVLGIVNKLLTVVINLVIWDK--HSTWVGTVGLLICMLGGVMY 327 (372)
Q Consensus 279 ~~~~a~~~s~~~~l~~v~~~~ls~~~~~e--~~t~~~~~G~~lil~g~~l~ 327 (372)
..-.....+.+.|+-|++..+++.++... ...+...++.++.++..++.
T Consensus 63 ~~~~~~~aa~l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l~~~~~~ 113 (135)
T PF04246_consen 63 PESSLLKAAFLVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGLALGFLI 113 (135)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556777777777777776654321 11445555554444444443
No 148
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=25.42 E-value=2.9e+02 Score=20.61 Aligned_cols=24 Identities=13% Similarity=0.326 Sum_probs=14.7
Q ss_pred HHcCCCCCCHhHHHHHHHHhhhhhh
Q 017423 148 LFLHQPWPSIKTWLSLATIFGGSVI 172 (372)
Q Consensus 148 l~l~~~~~~~~~~~~~~~~~~Gv~l 172 (372)
.+-|.+ .-..+|+-++.+++|+++
T Consensus 24 ~IkkT~-~v~~K~iPlIs~viGilL 47 (93)
T PF06946_consen 24 AIKKTK-VVPNKWIPLISVVIGILL 47 (93)
T ss_pred HHHHhc-cCCcchhhHHHHHHHHHH
Confidence 444544 345677777777777665
No 149
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=24.00 E-value=9 Score=34.60 Aligned_cols=55 Identities=15% Similarity=0.216 Sum_probs=46.1
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423 274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~ 328 (372)
-.+|++..+...+.+--.+..++++++++++++++-+..-..|+.+|+.|..+-.
T Consensus 119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv 173 (347)
T KOG1442|consen 119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV 173 (347)
T ss_pred cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc
Confidence 3467888888888877888999999999999999998888888888888865533
No 150
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=23.91 E-value=4.8e+02 Score=22.56 Aligned_cols=46 Identities=9% Similarity=0.125 Sum_probs=26.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCCCCc-hhhHHHH-HHHHHhhhh
Q 017423 281 ISATGFTVLGIVNKLLTVVINLVIWDKHST-WVGTVGL-LICMLGGVM 326 (372)
Q Consensus 281 ~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t-~~~~~G~-~lil~g~~l 326 (372)
..+...+.+..+-|..+..+|..+-+-... +.+|+|. ++++.|...
T Consensus 31 ~~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~m 78 (206)
T TIGR02840 31 LSNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWI 78 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 445566666667777777777765543323 3455554 455556543
No 151
>PRK02463 OxaA-like protein precursor; Provisional
Probab=23.56 E-value=5.5e+02 Score=23.88 Aligned_cols=38 Identities=11% Similarity=0.134 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423 288 VLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 288 ~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l 326 (372)
...++-|++.+++++.+ ---+..+-.+|.++.++=.++
T Consensus 209 ~m~~~~Pim~~~~~~~~-PagL~lYW~~snlfsi~Q~~i 246 (307)
T PRK02463 209 AMMYMMPIMMVVFSFSS-PAGVGLYWLVGGFFSIIQQLI 246 (307)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 35566777776665532 223444444555444444333
No 152
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=22.93 E-value=84 Score=24.01 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=35.4
Q ss_pred HHHhcccchhHHH-HHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423 275 FSCRRAISATGFT-VLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM 326 (372)
Q Consensus 275 ~~~i~~~~a~~~s-~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l 326 (372)
|+.+.+.+-+... +.+.+.-.++.+.|..+-.|...-..++|..+++.|+.+
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3444554433322 233455677788888777777888899999999999875
No 153
>PF14851 FAM176: FAM176 family
Probab=22.61 E-value=52 Score=27.06 Aligned_cols=9 Identities=11% Similarity=0.161 Sum_probs=4.1
Q ss_pred chhHHHHHH
Q 017423 282 SATGFTVLG 290 (372)
Q Consensus 282 ~a~~~s~~~ 290 (372)
.|-.++++.
T Consensus 18 ~PE~~aLYF 26 (153)
T PF14851_consen 18 NPERFALYF 26 (153)
T ss_pred ChHHHHHHH
Confidence 444444443
No 154
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=22.59 E-value=6.8e+02 Score=24.27 Aligned_cols=12 Identities=17% Similarity=0.163 Sum_probs=5.7
Q ss_pred HHHHHHHHcCCC
Q 017423 142 VAIGETLFLHQP 153 (372)
Q Consensus 142 v~~~~~l~l~~~ 153 (372)
....+.+.+|+|
T Consensus 367 ~~~~~~~~l~~~ 378 (445)
T PRK10644 367 YTCAALLLLGHG 378 (445)
T ss_pred HHHHHHHHHhhc
Confidence 344444555544
No 155
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=22.08 E-value=78 Score=19.57 Aligned_cols=17 Identities=29% Similarity=0.604 Sum_probs=11.1
Q ss_pred HHHHHHHHhhhhhcccc
Q 017423 315 VGLLICMLGGVMYQQST 331 (372)
Q Consensus 315 ~G~~lil~g~~l~~~~~ 331 (372)
+|.++++++.+++-+.+
T Consensus 21 V~vI~~vl~~~l~~~~r 37 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYR 37 (40)
T ss_pred hHHHHHHHHHHhheEEe
Confidence 46667777777775554
No 156
>PRK09765 PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
Probab=21.09 E-value=9.4e+02 Score=24.93 Aligned_cols=61 Identities=13% Similarity=-0.027 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017423 134 FRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVM 207 (372)
Q Consensus 134 i~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~ 207 (372)
...+.|++.+..++-+-+|....+.-..+++.... -.|++-++++.+..+--.-+.+|..+
T Consensus 343 ~~~~~pvl~a~iA~sia~k~g~~pg~~~g~~a~~~-------------~sgflg~Ii~~~l~gyv~~~l~k~ip 403 (631)
T PRK09765 343 GTLMVPVLAAYTAYSLADKPALAPGFAAGLAANMI-------------GSGFLGAVVGGLIAGYLMRWVKNHLR 403 (631)
T ss_pred HHHHHHHHHHHHHHHHhcccCcCchhHHHHHHHhc-------------CCccHHHHHHHHHHHHHHHHHHHHCC
Confidence 34667999998888775555333322222221111 14555555665665533344555543
No 157
>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=21.09 E-value=5.7e+02 Score=22.39 Aligned_cols=44 Identities=14% Similarity=0.351 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHH---hcCCC--------CchhhHHHHHHHHHhhhhhc
Q 017423 285 GFTVLGIVNKLLTVVINLV---IWDKH--------STWVGTVGLLICMLGGVMYQ 328 (372)
Q Consensus 285 ~~s~~~~l~~v~~~~ls~~---~~~e~--------~t~~~~~G~~lil~g~~l~~ 328 (372)
..+.+.++--+.++.+|.. .|.+. =-..+.+|+.+++.|+++..
T Consensus 138 ~~Gl~~fvLaiaT~~lGl~ek~~f~~~~~~~~~~e~~l~N~~gl~~~~fg~~V~~ 192 (214)
T cd08764 138 FFGLFIFVLAVATALLGITEKAFFSLNKYSNLPAEGVLGNFIGIVLVIFGGLVVY 192 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666663 33321 11468899999999976644
No 158
>PF11022 DUF2611: Protein of unknown function (DUF2611); InterPro: IPR021278 This family is conserved in the Dikarya of Fungi. The function is not known.
Probab=21.07 E-value=87 Score=22.11 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=15.7
Q ss_pred hcCCC-CchhhHHHHHHHHHhhhhhcccccC
Q 017423 304 IWDKH-STWVGTVGLLICMLGGVMYQQSTSN 333 (372)
Q Consensus 304 ~~~e~-~t~~~~~G~~lil~g~~l~~~~~~~ 333 (372)
+||.+ .+-.-.+|.+-.+.|++.+.....+
T Consensus 7 I~Gr~V~~H~LAi~tLg~~~~~~~~~~~g~k 37 (71)
T PF11022_consen 7 IFGRQVQSHYLAIATLGTVFGGVYLATSGSK 37 (71)
T ss_pred ecccccccchhHHHHHHHHHHHheeccCCCC
Confidence 44443 3334455666666666666554433
No 159
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=21.03 E-value=7.7e+02 Score=23.95 Aligned_cols=18 Identities=22% Similarity=0.132 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHhhhhhcc
Q 017423 312 VGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 312 ~~~~G~~lil~g~~l~~~ 329 (372)
...++.++++..+++|..
T Consensus 185 yF~~s~~~~llC~i~y~~ 202 (406)
T KOG1479|consen 185 YFITSTVILLLCFVLYLV 202 (406)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455666777777777773
No 160
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.57 E-value=3.7e+02 Score=20.07 Aligned_cols=56 Identities=7% Similarity=0.124 Sum_probs=29.6
Q ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHH---hcCC-CCchhhHHHHHHHHHhhhhhcccc
Q 017423 276 SCRRAISATGFTVLGIVNKLLTVVINLV---IWDK-HSTWVGTVGLLICMLGGVMYQQST 331 (372)
Q Consensus 276 ~~i~~~~a~~~s~~~~l~~v~~~~ls~~---~~~e-~~t~~~~~G~~lil~g~~l~~~~~ 331 (372)
.+++++.-...-.+-.+.-++++++|.+ +.++ .+-...|.|.+.-+++.-++....
T Consensus 23 q~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t 82 (93)
T PF06946_consen 23 QAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFT 82 (93)
T ss_pred HHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHH
Confidence 3456655333333333444555666554 2332 233345888877777777765444
No 161
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=20.48 E-value=82 Score=23.18 Aligned_cols=20 Identities=25% Similarity=0.576 Sum_probs=14.3
Q ss_pred chhhHHHHHHHHHhhhhhcc
Q 017423 310 TWVGTVGLLICMLGGVMYQQ 329 (372)
Q Consensus 310 t~~~~~G~~lil~g~~l~~~ 329 (372)
|....+|.++.+.|.+++..
T Consensus 3 N~~Fl~~l~lliig~~~~v~ 22 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFVF 22 (92)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 45667888888888776543
No 162
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=20.19 E-value=4.1e+02 Score=20.40 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423 138 VPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173 (372)
Q Consensus 138 ~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~ 173 (372)
+-..-+.++.+++||+ .++....+.+.+++++.++
T Consensus 72 tL~vF~~Fsv~~l~E~-l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 72 TLVVFAPFSVFYLGEP-LKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhheeHHHHHHHhCCC-ccHHHHHHHHHHHHhhhee
Confidence 3344456777899998 8999999988888877654
Done!