Query 017424
Match_columns 372
No_of_seqs 355 out of 1828
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:12:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.7 1.3E-17 4.4E-22 150.0 14.5 166 69-286 4-173 (195)
2 1u8s_A Glycine cleavage system 99.7 1.1E-15 3.9E-20 136.7 17.9 158 69-278 5-167 (192)
3 2nyi_A Unknown protein; protei 99.6 4E-15 1.4E-19 133.7 13.1 122 19-142 4-164 (195)
4 1u8s_A Glycine cleavage system 99.6 6.9E-14 2.4E-18 125.0 15.4 122 20-142 6-167 (192)
5 3p96_A Phosphoserine phosphata 98.9 9.2E-08 3.1E-12 94.7 20.1 166 68-289 10-179 (415)
6 3p96_A Phosphoserine phosphata 98.7 4.6E-07 1.6E-11 89.7 16.8 115 19-140 11-165 (415)
7 2f06_A Conserved hypothetical 98.3 1.3E-05 4.5E-10 67.5 14.7 96 21-117 7-118 (144)
8 1zpv_A ACT domain protein; str 98.1 1.6E-05 5.4E-10 61.4 9.9 67 204-277 4-70 (91)
9 1zpv_A ACT domain protein; str 98.1 2E-05 6.7E-10 60.9 10.3 66 69-140 4-69 (91)
10 2f06_A Conserved hypothetical 98.1 0.00021 7.3E-09 60.0 16.4 111 70-251 6-116 (144)
11 2ko1_A CTR148A, GTP pyrophosph 97.9 6E-05 2E-09 57.5 9.3 63 70-138 5-67 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 5.8E-05 2E-09 57.5 8.8 64 204-274 4-67 (88)
13 2re1_A Aspartokinase, alpha an 97.5 0.0053 1.8E-07 52.9 16.2 110 68-235 23-136 (167)
14 3obi_A Formyltetrahydrofolate 97.3 0.0012 4.1E-08 62.2 11.0 67 69-139 5-72 (288)
15 3obi_A Formyltetrahydrofolate 97.3 0.00049 1.7E-08 64.9 7.9 79 204-288 5-86 (288)
16 3nrb_A Formyltetrahydrofolate 97.3 0.0012 3.9E-08 62.3 10.2 65 69-139 6-71 (287)
17 3o1l_A Formyltetrahydrofolate 97.3 0.00044 1.5E-08 65.6 7.1 65 205-275 22-88 (302)
18 3lou_A Formyltetrahydrofolate 97.3 0.00061 2.1E-08 64.3 8.1 66 204-275 9-78 (292)
19 3lou_A Formyltetrahydrofolate 97.2 0.0017 5.9E-08 61.3 10.9 69 68-139 8-78 (292)
20 3l76_A Aspartokinase; alloster 97.2 0.25 8.5E-06 51.0 29.8 245 19-329 269-562 (600)
21 3nrb_A Formyltetrahydrofolate 97.2 0.00063 2.1E-08 64.1 7.8 106 204-323 6-114 (287)
22 2dt9_A Aspartokinase; protein- 97.2 0.0027 9.2E-08 54.7 11.3 109 203-328 14-129 (167)
23 3n0v_A Formyltetrahydrofolate 97.2 0.00092 3.1E-08 63.0 8.8 65 205-276 8-74 (286)
24 3n0v_A Formyltetrahydrofolate 97.2 0.0023 8E-08 60.2 11.3 66 69-139 7-73 (286)
25 2f1f_A Acetolactate synthase i 97.2 0.0016 5.6E-08 56.2 9.3 64 71-140 4-68 (164)
26 2re1_A Aspartokinase, alpha an 97.1 0.0048 1.6E-07 53.1 11.3 105 204-327 24-136 (167)
27 3o1l_A Formyltetrahydrofolate 97.1 0.0029 1E-07 59.9 10.7 67 69-139 21-88 (302)
28 2f1f_A Acetolactate synthase i 97.0 0.0028 9.5E-08 54.7 8.6 66 206-278 4-70 (164)
29 2pc6_A Probable acetolactate s 96.9 0.0029 9.9E-08 54.7 8.5 64 71-140 5-69 (165)
30 2jhe_A Transcription regulator 96.8 0.0038 1.3E-07 53.4 8.7 59 207-275 2-60 (190)
31 2dtj_A Aspartokinase; protein- 96.8 0.0087 3E-07 52.1 10.3 83 18-100 13-128 (178)
32 2dtj_A Aspartokinase; protein- 96.7 0.028 9.5E-07 48.8 13.4 110 68-235 13-128 (178)
33 2pc6_A Probable acetolactate s 96.7 0.0051 1.8E-07 53.1 8.2 66 206-278 5-71 (165)
34 2dt9_A Aspartokinase; protein- 96.7 0.024 8.3E-07 48.6 12.4 109 68-235 14-128 (167)
35 3s1t_A Aspartokinase; ACT doma 96.5 0.054 1.8E-06 47.2 13.4 110 68-235 14-129 (181)
36 3l76_A Aspartokinase; alloster 96.4 0.3 1E-05 50.4 20.6 162 18-239 353-562 (600)
37 1y7p_A Hypothetical protein AF 96.3 0.0079 2.7E-07 53.9 6.9 62 70-139 4-69 (223)
38 2fgc_A Acetolactate synthase, 96.3 0.017 5.9E-07 50.9 9.0 65 70-140 29-94 (193)
39 2jhe_A Transcription regulator 95.9 0.034 1.1E-06 47.3 9.2 59 72-139 2-60 (190)
40 2fgc_A Acetolactate synthase, 95.6 0.049 1.7E-06 48.0 8.7 66 205-277 29-95 (193)
41 3s1t_A Aspartokinase; ACT doma 95.4 0.14 4.7E-06 44.6 11.2 110 204-329 15-131 (181)
42 4go7_X Aspartokinase; transfer 95.4 0.16 5.5E-06 45.0 11.8 112 68-239 33-150 (200)
43 3ab4_A Aspartokinase; aspartat 95.3 0.83 2.8E-05 44.9 17.7 109 69-235 263-377 (421)
44 1y7p_A Hypothetical protein AF 95.1 0.034 1.2E-06 49.9 6.3 36 205-240 4-39 (223)
45 4go7_X Aspartokinase; transfer 94.5 0.11 3.9E-06 46.0 8.1 110 203-328 33-149 (200)
46 3ab4_A Aspartokinase; aspartat 93.7 0.64 2.2E-05 45.7 12.5 107 204-326 263-376 (421)
47 2qmx_A Prephenate dehydratase; 93.6 0.31 1.1E-05 45.5 9.6 92 43-139 156-264 (283)
48 3c1m_A Probable aspartokinase; 92.5 1.6 5.5E-05 43.5 13.6 114 69-234 317-436 (473)
49 1ygy_A PGDH, D-3-phosphoglycer 92.4 0.5 1.7E-05 47.9 9.8 67 201-271 450-516 (529)
50 3mwb_A Prephenate dehydratase; 92.2 0.89 3E-05 43.0 10.7 81 43-124 163-255 (313)
51 3c1m_A Probable aspartokinase; 92.0 0.63 2.2E-05 46.5 9.9 107 203-329 316-439 (473)
52 1sc6_A PGDH, D-3-phosphoglycer 91.3 0.55 1.9E-05 46.0 8.4 50 69-119 330-379 (404)
53 2qmw_A PDT, prephenate dehydra 91.1 1.5 5.1E-05 40.5 10.7 77 43-119 153-238 (267)
54 1ygy_A PGDH, D-3-phosphoglycer 90.6 1 3.5E-05 45.6 9.8 62 68-133 452-514 (529)
55 3luy_A Probable chorismate mut 90.0 2 6.9E-05 40.8 10.7 64 206-276 207-273 (329)
56 1sc6_A PGDH, D-3-phosphoglycer 89.9 0.79 2.7E-05 44.9 8.1 49 204-254 330-378 (404)
57 2qmx_A Prephenate dehydratase; 89.6 1.1 3.6E-05 41.9 8.3 54 204-259 199-253 (283)
58 3k5p_A D-3-phosphoglycerate de 89.4 1.5 5E-05 43.2 9.5 48 68-119 341-388 (416)
59 3tvi_A Aspartokinase; structur 88.5 1.5 5.1E-05 43.5 9.0 109 204-331 297-411 (446)
60 3tvi_A Aspartokinase; structur 86.9 2.3 7.8E-05 42.2 9.2 85 19-103 297-410 (446)
61 3mwb_A Prephenate dehydratase; 86.8 2.1 7E-05 40.5 8.4 55 203-259 199-255 (313)
62 2cdq_A Aspartokinase; aspartat 86.4 1.9 6.5E-05 43.5 8.4 109 204-330 340-455 (510)
63 2qmw_A PDT, prephenate dehydra 85.8 2.4 8.3E-05 39.0 8.2 52 203-256 184-239 (267)
64 3luy_A Probable chorismate mut 84.8 5.3 0.00018 37.9 10.2 56 79-139 217-272 (329)
65 3mah_A Aspartokinase; aspartat 84.8 1.8 6.2E-05 36.2 6.4 100 204-330 17-122 (157)
66 2cdq_A Aspartokinase; aspartat 82.9 23 0.00078 35.6 14.6 108 69-235 340-452 (510)
67 3k5p_A D-3-phosphoglycerate de 77.4 12 0.00041 36.6 10.1 49 203-253 341-389 (416)
68 3mtj_A Homoserine dehydrogenas 77.3 4.6 0.00016 40.0 7.1 51 69-119 358-409 (444)
69 3mah_A Aspartokinase; aspartat 76.0 1.8 6.2E-05 36.2 3.3 83 19-103 17-122 (157)
70 3mtj_A Homoserine dehydrogenas 72.0 3.6 0.00012 40.8 4.8 32 204-235 358-389 (444)
71 1phz_A Protein (phenylalanine 64.3 11 0.00038 37.0 6.3 53 202-256 31-84 (429)
72 2l48_A N-acetylmuramoyl-L-alan 48.2 73 0.0025 23.8 7.1 55 75-139 23-77 (85)
73 2yh5_A DAPX protein, BAMC; lip 46.2 72 0.0025 25.6 7.5 99 26-143 19-119 (127)
74 3rri_A Glyoxalase/bleomycin re 42.9 37 0.0013 26.0 5.3 46 309-356 79-124 (135)
75 1phz_A Protein (phenylalanine 42.1 34 0.0012 33.5 5.7 50 69-118 33-82 (429)
76 1zhv_A Hypothetical protein AT 41.2 71 0.0024 25.9 6.7 56 204-274 61-119 (134)
77 1tdj_A Biosynthetic threonine 36.7 1.6E+02 0.0056 29.3 10.0 111 205-327 338-464 (514)
78 1rwu_A Hypothetical UPF0250 pr 34.1 1.6E+02 0.0056 22.8 8.7 64 203-274 34-100 (109)
79 3dhx_A Methionine import ATP-b 31.6 1.6E+02 0.0054 22.4 7.1 59 217-285 36-94 (106)
80 3ced_A Methionine import ATP-b 31.5 1.6E+02 0.0056 22.0 9.2 40 215-257 33-72 (98)
81 2j0w_A Lysine-sensitive aspart 31.4 27 0.00094 34.3 3.2 103 203-325 306-415 (449)
82 3g12_A Putative lactoylglutath 29.1 1.9E+02 0.0065 22.0 7.8 49 68-124 65-114 (128)
83 1zvp_A Hypothetical protein VC 28.6 81 0.0028 25.6 5.1 38 203-244 69-109 (133)
84 2qsw_A Methionine import ATP-b 27.3 1.9E+02 0.0066 21.5 7.8 40 215-257 36-75 (100)
85 2qrr_A Methionine import ATP-b 27.1 2E+02 0.0067 21.5 7.1 49 206-257 24-75 (101)
86 1r9c_A Glutathione transferase 26.4 29 0.00098 27.1 2.0 55 311-371 79-138 (139)
87 3g12_A Putative lactoylglutath 25.9 1.3E+02 0.0045 22.9 5.9 47 299-356 69-116 (128)
88 3hdp_A Glyoxalase-I; glutathio 25.4 1.8E+02 0.0063 21.6 6.7 41 311-355 88-128 (133)
89 3ey7_A Biphenyl-2,3-DIOL 1,2-d 25.0 89 0.003 23.4 4.6 43 311-356 84-126 (133)
90 2kwz_A Protease NS2-3; NS2 dom 23.7 28 0.00095 22.3 1.0 14 306-319 12-25 (40)
91 1rwu_A Hypothetical UPF0250 pr 23.6 2.6E+02 0.0088 21.7 8.6 39 69-110 35-76 (109)
92 3ghj_A Putative integron gene 23.0 96 0.0033 24.2 4.6 40 310-355 97-136 (141)
93 3zw5_A Glyoxalase domain-conta 22.8 1E+02 0.0035 24.1 4.7 42 311-355 101-142 (147)
94 2rbb_A Glyoxalase/bleomycin re 22.3 1.2E+02 0.0041 23.3 5.0 40 311-356 89-128 (141)
95 1zhv_A Hypothetical protein AT 21.9 56 0.0019 26.5 2.9 31 71-101 63-96 (134)
96 3r6a_A Uncharacterized protein 21.7 2.7E+02 0.0093 21.7 7.2 46 71-124 67-112 (144)
97 3e5d_A Putative glyoxalase I; 21.1 1E+02 0.0035 22.8 4.2 39 311-355 85-123 (127)
98 3kol_A Oxidoreductase, glyoxal 20.8 1.4E+02 0.0047 23.0 5.1 40 310-356 108-147 (156)
99 3huh_A Virulence protein STM31 20.2 1.1E+02 0.0038 23.8 4.4 43 311-356 97-139 (152)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=1.3e-17 Score=150.05 Aligned_cols=166 Identities=12% Similarity=0.089 Sum_probs=115.5
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccccccc
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISC 148 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~~~~ 148 (372)
..++|+|+|+|||||+++|+++|+++|+||.+|++++..+++++ .|.|..+.. ..+.++++|++.|..++.+.
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~---- 76 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQIST---- 76 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEE----
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhc----
Confidence 35789999999999999999999999999999999988776776 777765321 11234556655554432210
Q ss_pred ccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECCcchHHHHHHHHHHh
Q 017424 149 DVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKD 228 (372)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~DRpGLL~~i~~~L~~ 228 (372)
.. ..++ + . .+ . ......++|+|.|+|||||+++|+++|++
T Consensus 77 -------~~----------~~~~-~----------------~-~~----~-~~~~~~~iltv~g~DrpGiva~Vt~~La~ 116 (195)
T 2nyi_A 77 -------RR----------ASSV-A----------------E-RH----V-SPDTREYELYVEGPDSEGIVEAVTAVLAK 116 (195)
T ss_dssp -------EE----------CCCC--------------------------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHH
T ss_pred -------CC----------eEEE-E----------------e-CC----c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHH
Confidence 01 0000 0 0 01 1 33456799999999999999999999999
Q ss_pred CCceEEEEEEeeeecC--CeEEEEEEEec-CCCCCCChhHHHHHHHHHHHHhcC-CceEEEe
Q 017424 229 YNIQVSYGRFSRRQRG--NCEIDLFIMQA-DGKKIVDPSKQNGLSSRLWMELLQ-PLRVTVV 286 (372)
Q Consensus 229 ~~~~I~~a~i~~~t~g--~~~~d~F~v~~-~g~~l~~~~~~~~l~~~L~~~l~~-~~~v~i~ 286 (372)
+|+||..++.. +.+ ++..+.|+++. -+.+ ++.. +.|++.|...... .+.+.+.
T Consensus 117 ~g~nI~~~~~~--t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a~~l~~di~~~ 173 (195)
T 2nyi_A 117 KGANIVELETE--TLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVEEEFGVDIDLE 173 (195)
T ss_dssp TTCEEEEEEEE--EEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCEEEceee--ecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHHHHcCeEEEEE
Confidence 99999998887 555 56779999862 2222 2345 7888888765543 3444443
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.68 E-value=1.1e-15 Score=136.73 Aligned_cols=158 Identities=11% Similarity=0.062 Sum_probs=111.3
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccccccc
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISC 148 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~~~~ 148 (372)
..++|+|+|+||||++++|+++|+++|+||.++++++..++.++ .|.|..+ +..+++|++.|.+.+.. .
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~~------~~~~~~l~~~L~~~~~~-~--- 73 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISGS------PSNITRVETTLPLLGQQ-H--- 73 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEEC------HHHHHHHHHHHHHHHHH-H---
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEecC------CCCHHHHHHHHHHHHHh-c---
Confidence 35789999999999999999999999999999999886544444 7777542 24577888888875532 1
Q ss_pred ccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECCcchHHHHHHHHHHh
Q 017424 149 DVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKD 228 (372)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~DRpGLL~~i~~~L~~ 228 (372)
+... ++.+. . .++ +..+...++|+|.|+||||++++|+.+|++
T Consensus 74 -----~~~~------------~~~~~----------~-----~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~ 116 (192)
T 1u8s_A 74 -----DLIT------------MMKRT----------S-----PHD-----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQ 116 (192)
T ss_dssp -----TCEE------------EEEEE----------C-----CCC-----CCCCSEEEEEEEEESCCTTHHHHHHHHHHH
T ss_pred -----CCEE------------EEEeC----------C-----CCC-----CccCCceEEEEEEeCCCccHHHHHHHHHHH
Confidence 0111 00000 0 011 234456799999999999999999999999
Q ss_pred CCceEEEEEEeeeecCC----eEEEEEEEec-CCCCCCChhHHHHHHHHHHHHhc
Q 017424 229 YNIQVSYGRFSRRQRGN----CEIDLFIMQA-DGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 229 ~~~~I~~a~i~~~t~g~----~~~d~F~v~~-~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
+|+||.+++.. |.+. +..+.|+++. -+.+ ++...+.|++.|.....
T Consensus 117 ~~~nI~~~~~~--t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 117 RQIGMASLSAQ--TISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALCT 167 (192)
T ss_dssp TTCCEEEEEEE--EEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHHH
T ss_pred cCCcHHHhhhh--cccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHHH
Confidence 99999998877 6663 5789999862 1212 23346788888876554
No 3
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.61 E-value=4e-15 Score=133.69 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=92.4
Q ss_pred CeEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEE-------EEEec--c------------------------CC-
Q 017424 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGASVVL-------YYRAE--M------------------------QA- 64 (372)
Q Consensus 19 ~~~~v~v~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~t~-------f~v~d--~------------------------~~- 64 (372)
..++|+|+|+||||||++++++|+.+|+||++|+++++ +.+.. . ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 83 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAKDGKLIQSALESALPGFQISTRRASSVA 83 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSSSSHHHHHHHHHHSTTCEEEEEECCCC-
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCccchhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 35799999999999999999999999999999999986 22221 0 00
Q ss_pred ----CCCCceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCC-CeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 65 ----PKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 65 ----~~~~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~-~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
......++|+|.|+|||||+++|+++|+++|+||.++++.|... ++..+.|++....+.+ +... +.|++.|..
T Consensus 84 ~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~l~~ 161 (195)
T 2nyi_A 84 ERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTALSR 161 (195)
T ss_dssp ---CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHHHHH
T ss_pred eCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHHHHH
Confidence 11235689999999999999999999999999999999976530 2345777776543322 2334 778888876
Q ss_pred HHc
Q 017424 140 ILG 142 (372)
Q Consensus 140 ~L~ 142 (372)
...
T Consensus 162 ~a~ 164 (195)
T 2nyi_A 162 VEE 164 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.55 E-value=6.9e-14 Score=125.04 Aligned_cols=122 Identities=12% Similarity=0.160 Sum_probs=90.2
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEE-------EEEec-------------------------c--C--
Q 017424 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGASVVL-------YYRAE-------------------------M--Q-- 63 (372)
Q Consensus 20 ~~~v~v~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~t~-------f~v~d-------------------------~--~-- 63 (372)
.++|+|+|+||||+|++++++|+.+|+||+++++++. +.+.. + .
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 85 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPH 85 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECHHHHHHHHHHHHHHHHHHTCEEEEEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCCCCHHHHHHHHHHHHHhcCCEEEEEeCCCC
Confidence 4789999999999999999999999999999999876 22321 0 0
Q ss_pred C-CCCCceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCC---CeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 64 A-PKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD---GKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 64 ~-~~~~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~---~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
. ..+...++|+|.++||||++++|+++|+++|+||.+++..|... .+..+.|++....+.+ +....+.|++.|..
T Consensus 86 ~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~l~~~l~~ 164 (192)
T 1u8s_A 86 DHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQLQEEFDA 164 (192)
T ss_dssp CCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHHHHHHHHH
T ss_pred CCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHHHHHHHHH
Confidence 0 11225689999999999999999999999999999999977531 2456778776543211 12235778888876
Q ss_pred HHc
Q 017424 140 ILG 142 (372)
Q Consensus 140 ~L~ 142 (372)
...
T Consensus 165 ~~~ 167 (192)
T 1u8s_A 165 LCT 167 (192)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.90 E-value=9.2e-08 Score=94.74 Aligned_cols=166 Identities=10% Similarity=0.045 Sum_probs=103.9
Q ss_pred CceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHh--HHHHHHHHHHHHHcccc
Q 017424 68 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRK--RKEDTYEHLKTILGNAM 145 (372)
Q Consensus 68 ~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~--~~~~l~~~L~~~L~~~~ 145 (372)
...++|+|.|+||||+.+.|+++|+++|+||.++..++. +|++.-...+.-+ +. ..+.|++.|.. +..+.
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~-~~~f~~~~~~~~~------~~~~~~~~l~~~l~~-~~~~~ 81 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI-RHRLTLGVLVCCP------ADVADGPALRHDVEA-AIRKV 81 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE-TTEEEEEEEEEEC------HHHHTSHHHHHHHHH-HHHHT
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE-CCEeEEEEEEEec------CCcCCHHHHHHHHHH-HHHHc
Confidence 346899999999999999999999999999999999764 5654333333221 21 23677777766 33221
Q ss_pred cccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECC-cchHHHHHHH
Q 017424 146 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD-HKGLLYDIMR 224 (372)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~D-RpGLL~~i~~ 224 (372)
+.... ++. .+ .++ ......+.++++.+.| +||++.+|+.
T Consensus 82 --------~~~~~------------~~~-----------~~----~~~-----~~~~~~~~~~~llg~~~~~~~~~~i~~ 121 (415)
T 3p96_A 82 --------GLDVS------------IER-----------SD----DVP-----IIREPSTHTIFVLGRPITAAAFGAVAR 121 (415)
T ss_dssp --------TCEEE------------EEE-----------CS----SSC-----SSCCCCSEEEEEEESSCCHHHHHHHHH
T ss_pred --------CeEEE------------EEE-----------CC----ccc-----ccCCCCcEEEEEEeCCCCHHHHHHHHH
Confidence 11110 000 00 000 1133467899999999 9999999999
Q ss_pred HHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhc-CCceEEEeecC
Q 017424 225 TLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL-QPLRVTVVSRG 289 (372)
Q Consensus 225 ~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~-~~~~v~i~~~g 289 (372)
+|+++|.||...+-- +......-.|++.. .+ ...++++++|.+... ..+.+.+.+.+
T Consensus 122 ~l~~~~~Ni~~l~~~--~~~~~~~~~~~v~~--~~----~~~~~l~~~l~~l~~~~~vD~~v~~~~ 179 (415)
T 3p96_A 122 EVAALGVNIDLIRGV--SDYPVIGLELRVSV--PP----GADEALRTALNRVSSEEHVDVAVEDYT 179 (415)
T ss_dssp HHHHTTCEEEEEEEE--ESSSSEEEEEEEEC--CT----TCHHHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHcCCCccceeec--cCCCceEEEEEeeC--CC----CCHHHHHHHHHHHhhhcCcCccccccc
Confidence 999999999874433 43233333366642 12 234667777765543 34555555544
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.68 E-value=4.6e-07 Score=89.70 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=83.0
Q ss_pred CeEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEE---------EEEe----c------------------------
Q 017424 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGASVVL---------YYRA----E------------------------ 61 (372)
Q Consensus 19 ~~~~v~v~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~t~---------f~v~----d------------------------ 61 (372)
..+.|+|.|+||||+.+.+++.|+++|+||++++.+.. |... +
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 90 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSIERS 90 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEEEEEEC
Confidence 45789999999999999999999999999999999775 2111 1
Q ss_pred -cC-CCCCCceEEEEEEeCC-CCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHH
Q 017424 62 -MQ-APKPSDVFLLKLSCYD-RKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLK 138 (372)
Q Consensus 62 -~~-~~~~~~~~~i~v~~~D-rpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~ 138 (372)
.. ......++.+++.+.| ++|++.+|+.+|+++|+||.+.+..+......++ |++..+. .+ .+.+++.|.
T Consensus 91 ~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~-~~v~~~~---~~---~~~l~~~l~ 163 (415)
T 3p96_A 91 DDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLE-LRVSVPP---GA---DEALRTALN 163 (415)
T ss_dssp SSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEE-EEEECCT---TC---HHHHHHHHH
T ss_pred CcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEE-EEeeCCC---CC---HHHHHHHHH
Confidence 00 1123467899999999 9999999999999999999988875532223222 5554322 12 345555555
Q ss_pred HH
Q 017424 139 TI 140 (372)
Q Consensus 139 ~~ 140 (372)
+.
T Consensus 164 ~l 165 (415)
T 3p96_A 164 RV 165 (415)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.34 E-value=1.3e-05 Score=67.52 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=69.9
Q ss_pred EEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE------E-EEEecc--------CCCCC-CceEEEEEEeCCCCcHH
Q 017424 21 CVITVNCPDKTGLGCDLCRIILFFGLSIVRGASVV------L-YYRAEM--------QAPKP-SDVFLLKLSCYDRKGLL 84 (372)
Q Consensus 21 ~~v~v~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~t------~-f~v~d~--------~~~~~-~~~~~i~v~~~DrpGLL 84 (372)
..|+|..+|+||.++++++.|++.|+||..-.+.. + |.+.|. ..... ....++.+.-+|+||.+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~d~~~a~~~L~~~G~~v~~~svv~v~~~d~pGvl 86 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKDNHFAVNITDVVGISCPNVPGAL 86 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHHTTCCEEEEEEEEEEEESSTTHH
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeCCHHHHHHHHHHcCCeEeeeeEEEEEeCCCCcHH
Confidence 57889999999999999999999999998765542 1 444330 01111 11236667789999999
Q ss_pred HHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEE
Q 017424 85 YDVTAVLCELELTIEKVKISTTPDGKVMDLFFV 117 (372)
Q Consensus 85 ~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V 117 (372)
++++++|++.|+||.....+. .+++..-+|.+
T Consensus 87 a~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~ 118 (144)
T 2f06_A 87 AKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRP 118 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEe
Confidence 999999999999998777642 34555445544
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.13 E-value=1.6e-05 Score=61.44 Aligned_cols=67 Identities=7% Similarity=0.101 Sum_probs=48.3
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHh
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL 277 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l 277 (372)
..+.|++.|+||||+|++|+.+|+++|+||.+.... +..+...-.+.+... +...++.|.+.|.+.-
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~--~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQT--VLDEYFTMMAVVSSD-----EKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEE--EETTEEEEEEEEEES-----SCCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeE--EEcCEEEEEEEEEeC-----CCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999987766 444433333333321 2234678888887554
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.12 E-value=2e-05 Score=60.88 Aligned_cols=66 Identities=12% Similarity=0.199 Sum_probs=50.7
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHH
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 140 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~ 140 (372)
..+.|++.++||||++++|+++|+++|+||.+....+.. +.+.-.+.+.-++ ...+++|.+.|.+.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~-~~~~~~i~v~~~~-----~~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD-EYFTMMAVVSSDE-----KQDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESS-----CCCHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc-CEEEEEEEEEeCC-----CCCHHHHHHHHHHH
Confidence 357899999999999999999999999999999997764 6665555553322 12357787887763
No 10
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.06 E-value=0.00021 Score=59.96 Aligned_cols=111 Identities=20% Similarity=0.231 Sum_probs=72.4
Q ss_pred eEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHcccccccc
Q 017424 70 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISCD 149 (372)
Q Consensus 70 ~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~~~~~ 149 (372)
...|+|..+|+||.++++++.|++.|+||..-.+..+.+. ..-.|.+. ++ ++.++.|++. +
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~-~~~~~~~~-------d~---~~a~~~L~~~--G------ 66 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADF-GILRGIVS-------DP---DKAYKALKDN--H------ 66 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSC-EEEEEEES-------CH---HHHHHHHHHT--T------
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCC-CEEEEEeC-------CH---HHHHHHHHHc--C------
Confidence 3578889999999999999999999999998877543331 11123321 12 3333333321 1
Q ss_pred cccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECCcchHHHHHHHHHHhC
Q 017424 150 VEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKDY 229 (372)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~DRpGLL~~i~~~L~~~ 229 (372)
. .+. .+.++-+.-+|+||.+++++++|++.
T Consensus 67 -------~------------------------------------~v~-------~~svv~v~~~d~pGvla~i~~~L~~~ 96 (144)
T 2f06_A 67 -------F------------------------------------AVN-------ITDVVGISCPNVPGALAKVLGFLSAE 96 (144)
T ss_dssp -------C------------------------------------CEE-------EEEEEEEEEESSTTHHHHHHHHHHHT
T ss_pred -------C------------------------------------eEe-------eeeEEEEEeCCCCcHHHHHHHHHHHC
Confidence 0 000 01467777889999999999999999
Q ss_pred CceEEEEEEeeeecCCeEEEEE
Q 017424 230 NIQVSYGRFSRRQRGNCEIDLF 251 (372)
Q Consensus 230 ~~~I~~a~i~~~t~g~~~~d~F 251 (372)
|+||.+.... ..+.+..-.|
T Consensus 97 ~InI~~~~~~--~~~~~~~~~i 116 (144)
T 2f06_A 97 GVFIEYMYSF--ANNNVANVVI 116 (144)
T ss_dssp TCCEEEEEEE--EETTEEEEEE
T ss_pred CCCEEEEEEE--ccCCcEEEEE
Confidence 9999764332 1344444444
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.91 E-value=6e-05 Score=57.46 Aligned_cols=63 Identities=11% Similarity=0.266 Sum_probs=46.2
Q ss_pred eEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHH
Q 017424 70 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLK 138 (372)
Q Consensus 70 ~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~ 138 (372)
.+.|.|.+.||||+|++|+++|++.|+||.+..+.+.. +.+...|.+... +.+.++++.+.|+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~~~~~~i~v~~~-----~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-GIFTCNLMIFVK-----NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-SEEEEEEEEEES-----SHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-CEEEEEEEEEEC-----CHHHHHHHHHHHh
Confidence 46789999999999999999999999999999996654 465555555332 2334455544443
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.88 E-value=5.8e-05 Score=57.54 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=47.4
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHH
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 274 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~ 274 (372)
..+.|.+.+.||||+|++|+.+|++.|+||.+.... +.++.+...|.+.. .+++.++++.+.|.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~--~~~~~~~~~i~v~~-----~~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLN--AKDGIFTCNLMIFV-----KNTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEE--ECSSEEEEEEEEEE-----SSHHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEE--EcCCEEEEEEEEEE-----CCHHHHHHHHHHHh
Confidence 357889999999999999999999999999987776 54544444554432 24556666666654
No 13
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.48 E-value=0.0053 Score=52.86 Aligned_cols=110 Identities=18% Similarity=0.256 Sum_probs=73.5
Q ss_pred CceEEEEEEe-CCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccccc
Q 017424 68 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMI 146 (372)
Q Consensus 68 ~~~~~i~v~~-~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~~ 146 (372)
.+...|+|.+ +|+||.+++|.++|+++|+||..-....+.+|..-=.|.|.. ...++..+.|++ +..+.
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l- 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI- 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc-
Confidence 3567889985 999999999999999999999876543222343323466632 112333344444 21110
Q ss_pred ccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECC---cchHHHHHH
Q 017424 147 SCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD---HKGLLYDIM 223 (372)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~D---RpGLL~~i~ 223 (372)
. ...|.+. .+.+.+.|.|.+ +||+++.+.
T Consensus 93 ---------------------~-----------------------~~~i~~~----~~~a~vsvvG~~m~~~~Gv~a~i~ 124 (167)
T 2re1_A 93 ---------------------G-----------------------AASIDGD----DTVCKVSAVGLGMRSHVGVAAKIF 124 (167)
T ss_dssp ---------------------T-----------------------CSEEEEE----SSEEEEEEECSSCTTCCCHHHHHH
T ss_pred ---------------------C-----------------------CceEEec----CCEEEEEEECCCcCCCcCHHHHHH
Confidence 0 0123332 357899999987 999999999
Q ss_pred HHHHhCCceEEE
Q 017424 224 RTLKDYNIQVSY 235 (372)
Q Consensus 224 ~~L~~~~~~I~~ 235 (372)
.+|.+.|+||..
T Consensus 125 ~aL~~~~InI~~ 136 (167)
T 2re1_A 125 RTLAEEGINIQM 136 (167)
T ss_dssp HHHHHTTCCCCE
T ss_pred HHHHHCCCcEEE
Confidence 999999999997
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.34 E-value=0.0012 Score=62.25 Aligned_cols=67 Identities=18% Similarity=0.247 Sum_probs=48.1
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC-CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~-~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..++|++.|+|||||.++|+++|+++|+||.+...++.. .|++.-...+.-+.+. . ..++|++.|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~---~~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-I---PLASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-C---CHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-C---CHHHHHHHHHH
Confidence 357899999999999999999999999999999987433 5655333333222211 1 24677777765
No 15
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.30 E-value=0.00049 Score=64.91 Aligned_cols=79 Identities=10% Similarity=0.127 Sum_probs=50.0
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe--cCCCCCCChhHHHHHHHHHHHHhc-CC
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGKKIVDPSKQNGLSSRLWMELL-QP 280 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~--~~g~~l~~~~~~~~l~~~L~~~l~-~~ 280 (372)
..++|++.|+|||||++.|+..|+++|+||.+..-.+....+ .|+.. .+.... ....++|++.|...-. -.
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g----~Ffmr~~~~~~~~--~~~~~~L~~~f~~la~~~~ 78 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESG----HFFMRVVFNAAAK--VIPLASLRTGFGVIAAKFT 78 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTT----EEEEEEEEEESSC--CCCHHHHHHHHHHHHHHTT
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCC----ceEEEEEEEcCCC--CCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999986654222233 56543 111110 1135677777754332 13
Q ss_pred ceEEEeec
Q 017424 281 LRVTVVSR 288 (372)
Q Consensus 281 ~~v~i~~~ 288 (372)
+.+.+.+.
T Consensus 79 m~~~l~~~ 86 (288)
T 3obi_A 79 MGWHMRDR 86 (288)
T ss_dssp CEEEEEET
T ss_pred CEEEeecc
Confidence 34444443
No 16
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.28 E-value=0.0012 Score=62.31 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=45.8
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC-CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~-~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..++|++.|+|||||.++|++.|+++|+||.++..++.. .|++.-...+.. .+ ...++|++.|..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~-----~~~~~L~~~f~~ 71 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PV-----AGVNDFNSAFGK 71 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC--------CHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CC-----CCHHHHHHHHHH
Confidence 468999999999999999999999999999999987433 555432222221 11 113467777665
No 17
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.26 E-value=0.00044 Score=65.64 Aligned_cols=65 Identities=15% Similarity=0.253 Sum_probs=45.1
Q ss_pred eeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe--cCCCCCCChhHHHHHHHHHHH
Q 017424 205 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGKKIVDPSKQNGLSSRLWM 275 (372)
Q Consensus 205 ~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~--~~g~~l~~~~~~~~l~~~L~~ 275 (372)
.++|++.|+|||||++.|+..|+++|+||.++.-.+....+ .|+.+ .+.... ....++|++.|..
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g----~FfMr~~~~~~~~--~~~~~~L~~~l~~ 88 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSG----WFFMRHEIRADTL--PFDLDGFREAFTP 88 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTT----EEEEEEEEEGGGS--SSCHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCC----eEEEEEEEecCCC--CCCHHHHHHHHHH
Confidence 47999999999999999999999999999986655222233 56654 221111 1135667777653
No 18
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.26 E-value=0.00061 Score=64.34 Aligned_cols=66 Identities=9% Similarity=0.087 Sum_probs=45.3
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe--cCCC--CCCChhHHHHHHHHHHH
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGK--KIVDPSKQNGLSSRLWM 275 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~--~~g~--~l~~~~~~~~l~~~L~~ 275 (372)
..++|++.|+|||||++.|+..|+++|+||.+..-.+....+ .|+.+ .+.. .. ....++|++.|..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g----~Ffmr~~~~~~~~~~--~~~~~~L~~~f~~ 78 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSA----RFFVRCVFHATDDAD--ALRVDALRREFEP 78 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTT----EEEEEEEEEECC------CCHHHHHHHHHH
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCC----ceEEEEEEEccCccc--CCCHHHHHHHHHH
Confidence 458999999999999999999999999999986654222233 56554 2222 10 1235677777753
No 19
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.24 E-value=0.0017 Score=61.27 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=47.4
Q ss_pred CceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEee-CCCeEEEEEEEEcCC-CCCCCHhHHHHHHHHHHH
Q 017424 68 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTR-ELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 68 ~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~-~~~~~~DvF~V~~~~-g~~~~~~~~~~l~~~L~~ 139 (372)
...+++++.|+||||++++|++.|+++|+||.++..++. ..|++.-...+..+. +. ....++|++.|..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~---~~~~~~L~~~f~~ 78 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDAD---ALRVDALRREFEP 78 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC-------CCHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCccc---CCCHHHHHHHHHH
Confidence 346899999999999999999999999999999998643 245543222222210 10 1125677777765
No 20
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.23 E-value=0.25 Score=51.03 Aligned_cols=245 Identities=18% Similarity=0.208 Sum_probs=143.9
Q ss_pred CeEEEEEEc-CCCCChHHHHHHHHHhCCCeEEEEEE-------EEE-EEEec--------------cCC-------C---
Q 017424 19 DPCVITVNC-PDKTGLGCDLCRIILFFGLSIVRGAS-------VVL-YYRAE--------------MQA-------P--- 65 (372)
Q Consensus 19 ~~~~v~v~~-~Dr~GL~~~i~~~l~~~~lnI~~a~i-------~t~-f~v~d--------------~~~-------~--- 65 (372)
+...|++.. ++.+|..+++.+.|+++++||.---. .+. |.+.+ ..+ .
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~~~a~~~l~~~~~el~~~~~~~~~~~ 348 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAE 348 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGHHHHHHHHHHHGGGGSSSTTCSSSSE
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHHHHHHHHHHHHHHHhhccccccCcce
Confidence 345566654 79999999999999999999932211 122 66643 011 1
Q ss_pred --CCCceEEEEEEeC---CCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHH
Q 017424 66 --KPSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 140 (372)
Q Consensus 66 --~~~~~~~i~v~~~---DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~ 140 (372)
...+...|.+.+. .+||+.+++..+|++.|+||..-. ++ +.- -.|.|.. +..++..+.|.+.
T Consensus 349 v~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~-Is~vI~~--------~d~~~Av~aLh~~ 415 (600)
T 3l76_A 349 IIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVK-VSCVIDQ--------RDADRAIAALSNA 415 (600)
T ss_dssp EEEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSE-EEEEEEG--------GGHHHHHHHHHHH
T ss_pred eEecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCE-EEEEEcH--------HHHHHHHHHHHHh
Confidence 1256778999985 799999999999999999997654 33 322 1244432 2234455566665
Q ss_pred HcccccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEE-ECCcchHH
Q 017424 141 LGNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIV-CQDHKGLL 219 (372)
Q Consensus 141 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~-~~DRpGLL 219 (372)
+..... +.. ....+.+ . ..-+-|..+ .+.+.|++. -+|+||+.
T Consensus 416 f~~~~t--------~~~---------~~~~~~~-----------~----~~v~Gia~~----~~~a~i~i~~~~~~~g~~ 459 (600)
T 3l76_A 416 FGVTLS--------PPK---------NQTDTSH-----------L----PAVRGVALD----QDQAQIAIRHVPDRPGMA 459 (600)
T ss_dssp TTCCBC--------CCC---------CCCC--------------C----CSCCEEEEE----CSEEEEEEEEEESSTTHH
T ss_pred hcccCC--------Ccc---------ccccccc-----------c----CceEEEEee----CCEEEEEEecCCCCccHH
Confidence 542110 000 0000000 0 001234433 345666665 48999999
Q ss_pred HHHHHHHHhCCceEEEEEEeeeec---CC-eEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcCCc---eEEEeecCCCc
Q 017424 220 YDIMRTLKDYNIQVSYGRFSRRQR---GN-CEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPL---RVTVVSRGPDT 292 (372)
Q Consensus 220 ~~i~~~L~~~~~~I~~a~i~~~t~---g~-~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~~~---~v~i~~~g~~~ 292 (372)
++|...|++.|+||..-.-+.+.+ |. ...=.|.+. .+..+...+.|.+ +...+ .+.+. .+
T Consensus 460 ~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~--------~~d~~~a~~~l~~-~~~~~~~~~v~~~-~~--- 526 (600)
T 3l76_A 460 AQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVA--------EGDSSQAEAILQP-LIKDWLDAAIVVN-KA--- 526 (600)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEE--------HHHHHHHHHHHHH-HTTTSTTCEEEEE-CC---
T ss_pred HHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEe--------HHHHHHHHHHHHH-HHHhcCCceEEEe-CC---
Confidence 999999999999997411111111 21 223345553 2233444444443 22211 22221 11
Q ss_pred ceeeeeeEEEEe---CCCCchHHHHHHHHHhCCeEEEEEE
Q 017424 293 ELLVANPVELSG---KGRPLVFHDITLALKMLDICIFSAE 329 (372)
Q Consensus 293 ~~~~~~~~~v~~---~DRpgll~dvt~~L~~~~~~V~~a~ 329 (372)
...+.+.| +.+||+...+-.+|.+.|+||..-.
T Consensus 527 ----~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 527 ----IAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp ----EEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred ----eEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 24688888 6999999999999999999995544
No 21
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.23 E-value=0.00063 Score=64.13 Aligned_cols=106 Identities=11% Similarity=0.137 Sum_probs=61.7
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe--cCCCCCCChhHHHHHHHHHHHHhcC-C
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGKKIVDPSKQNGLSSRLWMELLQ-P 280 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~--~~g~~l~~~~~~~~l~~~L~~~l~~-~ 280 (372)
..++|++.|+|||||++.|+..|+++|+||.+..-.+....+ .|+.+ .+.... ..++|++.|...-.+ .
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g----~Ffmr~~~~~~~~----~~~~L~~~f~~la~~~~ 77 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSS----KFFMRVSVEIPVA----GVNDFNSAFGKVVEKYN 77 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTT----EEEEEEEEECCC-------CHHHHHHHHHHGGGT
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCC----eEEEEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999986654222233 67664 222221 234677777543322 2
Q ss_pred ceEEEeecCCCcceeeeeeEEEEeCCCCchHHHHHHHHHhCCe
Q 017424 281 LRVTVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDI 323 (372)
Q Consensus 281 ~~v~i~~~g~~~~~~~~~~~~v~~~DRpgll~dvt~~L~~~~~ 323 (372)
+.+.+...+.... ..+=++|.+ --|.++....++-.+
T Consensus 78 m~~~l~~~~~~~r----i~vl~Sg~g--~nl~~ll~~~~~g~l 114 (287)
T 3nrb_A 78 AEWWFRPRTDRKK----VVIMVSKFD--HCLGDLLYRHRLGEL 114 (287)
T ss_dssp CEEEEEETTCCCE----EEEEECSCC--HHHHHHHHHHHHTSS
T ss_pred CeeEeeccCCCcE----EEEEEeCCC--cCHHHHHHHHHCCCC
Confidence 3444443332111 122334443 455666666654433
No 22
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.23 E-value=0.0027 Score=54.69 Aligned_cols=109 Identities=14% Similarity=0.129 Sum_probs=70.8
Q ss_pred CCeeEEEEEE-CCcchHHHHHHHHHHhCCceEEEEEEeeeec---CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhc
Q 017424 203 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 203 ~~~tvi~v~~-~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~---g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
.+.+.|++.+ .|+||.++++..+|++.|+||.. |+.+.. .+...=.|.+.. .+.++..++-+.+...+.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~-----~d~~~a~~~L~~~~~~~~ 86 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKK-----DFAQEALEALEPVLAEIG 86 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEG-----GGHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEeh-----HHHHHHHHHHHHHHHHhC
Confidence 4578888877 79999999999999999999985 542111 113334566652 122222222233333444
Q ss_pred CCceEEEeecCCCcceeeeeeEEEEeCC---CCchHHHHHHHHHhCCeEEEEE
Q 017424 279 QPLRVTVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFSA 328 (372)
Q Consensus 279 ~~~~v~i~~~g~~~~~~~~~~~~v~~~D---Rpgll~dvt~~L~~~~~~V~~a 328 (372)
- .+.+ ..+ ...+.+.|.+ +||++..+..+|.+.|+||+.-
T Consensus 87 ~--~v~~-~~~-------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 87 G--EAIL-RPD-------IAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp C--EEEE-ECS-------EEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred C--cEEE-eCC-------EEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 2 3332 111 2368888976 9999999999999999999543
No 23
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.22 E-value=0.00092 Score=62.97 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=46.0
Q ss_pred eeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe--cCCCCCCChhHHHHHHHHHHHH
Q 017424 205 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGKKIVDPSKQNGLSSRLWME 276 (372)
Q Consensus 205 ~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~--~~g~~l~~~~~~~~l~~~L~~~ 276 (372)
.++|++.|+|||||++.|+..|+++|+||.+..-.+....+ .|+.+ .+... ....++|++.|...
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g----~Ffmr~~~~~~~---~~~~~~L~~~f~~l 74 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSG----RFFIRVEFRQPD---DFDEAGFRAGLAER 74 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTT----EEEEEEEEECCS---SCCHHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCC----eeEEEEEEecCC---CCCHHHHHHHHHHH
Confidence 48999999999999999999999999999986654222233 56654 22111 12357788887644
No 24
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.19 E-value=0.0023 Score=60.16 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=47.8
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC-CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~-~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..++|++.|+|||||+++|++.|+++|+||.+...++.. .|++.-...+..+. .. ..++|++.|..
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~---~~~~L~~~f~~ 73 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD--DF---DEAGFRAGLAE 73 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS--SC---CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC--CC---CHHHHHHHHHH
Confidence 457899999999999999999999999999999986432 45543233332221 12 25678887766
No 25
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.19 E-value=0.0016 Score=56.21 Aligned_cols=64 Identities=17% Similarity=0.162 Sum_probs=50.8
Q ss_pred EEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCC-CeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHH
Q 017424 71 FLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 140 (372)
Q Consensus 71 ~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~-~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~ 140 (372)
..|+|...|+||+|++|+++|++.|+||.+..+.++.+ +...-+|.|.. . +..++++.+.|.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~---d---~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG---D---EKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES---C---HHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec---c---HHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999976664 66555566642 1 55677787777773
No 26
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.07 E-value=0.0048 Score=53.13 Aligned_cols=105 Identities=17% Similarity=0.134 Sum_probs=68.1
Q ss_pred CeeEEEEEE-CCcchHHHHHHHHHHhCCceEEEEEEeeeec-CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcCCc
Q 017424 204 GHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPL 281 (372)
Q Consensus 204 ~~tvi~v~~-~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~-g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~~~ 281 (372)
+.+.|+|.+ .|+||.++++..+|+++|+||.. |+.+.. ++...=.|++.. ...++..+.|.+. ...+
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~--i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~~-~~~l 92 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDM--IIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSER-QDSI 92 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCC--EEEC----CEEEEEEEECG--------GGHHHHHHHHHHS-STTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEE--EEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHHH-HHHc
Confidence 568888885 89999999999999999999996 432111 122233455542 1223334444432 2211
Q ss_pred ---eEEEeecCCCcceeeeeeEEEEeCC---CCchHHHHHHHHHhCCeEEEE
Q 017424 282 ---RVTVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFS 327 (372)
Q Consensus 282 ---~v~i~~~g~~~~~~~~~~~~v~~~D---Rpgll~dvt~~L~~~~~~V~~ 327 (372)
.+.+ ..+ ...+.+.|.+ +||++..+..+|.+.|+||..
T Consensus 93 ~~~~i~~-~~~-------~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 93 GAASIDG-DDT-------VCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp TCSEEEE-ESS-------EEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred CCceEEe-cCC-------EEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 1111 111 2468889976 999999999999999999966
No 27
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.07 E-value=0.0029 Score=59.93 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=47.9
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC-CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~-~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..++|++.|+|||||+++|++.|+++|+||.++..++.. .|++.-...+.-+.+ .. ..++|++.|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~---~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PF---DLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SS---CHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CC---CHHHHHHHHHH
Confidence 357999999999999999999999999999999986542 466533333322111 11 24677777765
No 28
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.96 E-value=0.0028 Score=54.73 Aligned_cols=66 Identities=6% Similarity=0.063 Sum_probs=48.9
Q ss_pred eEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeec-CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhc
Q 017424 206 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 206 tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~-g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
..|+|...||||+|++|+.+|++.|+||.+..+.. +. .+...-.|.++. +++.++.|..+|.+...
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~-t~d~~~sriti~V~~------d~~~leqI~kqL~Kl~d 70 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAP-TDDPTLSRMTIQTVG------DEKVLEQIEKQLHKLVD 70 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEE-CSCSSEEEEEEEEES------CHHHHHHHHHHHHHSTT
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeee-cCCCCEEEEEEEEec------cHHHHHHHHHHHcCCCC
Confidence 57889999999999999999999999999866652 22 233333444431 35678899999876543
No 29
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.93 E-value=0.0029 Score=54.66 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=50.5
Q ss_pred EEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCC-CeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHH
Q 017424 71 FLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 140 (372)
Q Consensus 71 ~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~-~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~ 140 (372)
..|+|...|+||+|++|+++|++.|+||.+..+..+.+ +...-+|.|.. ++..++++.+.|.+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCC
Confidence 57889999999999999999999999999999976653 65555566642 145677787777773
No 30
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.84 E-value=0.0038 Score=53.43 Aligned_cols=59 Identities=14% Similarity=0.216 Sum_probs=44.0
Q ss_pred EEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHH
Q 017424 207 LVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 275 (372)
Q Consensus 207 vi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~ 275 (372)
-|+|.|.||+|||.+|+.+|++.++||....+. +.|. ++++. +..+.+....|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~--~~g~-----i~~~~---~~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEID--PIGR-----IYLNF---AELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEE--TTTE-----EEEEE---CCCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEe--cCCE-----EEEEE---EeCCHHHHHHHHHHHHc
Confidence 378999999999999999999999999997776 4432 44543 22345566777766653
No 31
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.75 E-value=0.0087 Score=52.09 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=62.9
Q ss_pred CCeEEEEE-EcCCCCChHHHHHHHHHhCCCeEEEEEEE-------EE---EEEec----------cC----CC-----CC
Q 017424 18 GDPCVITV-NCPDKTGLGCDLCRIILFFGLSIVRGASV-------VL---YYRAE----------MQ----AP-----KP 67 (372)
Q Consensus 18 ~~~~~v~v-~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~-------t~---f~v~d----------~~----~~-----~~ 67 (372)
.+.+.|+| ..+|+||..+++.+.|+++|+||.---.. .. |.+.. .. .. ..
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~~~a~~~l~~~~~~~~~~~v~~~ 92 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYD 92 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHHHHHHHHHHTTTTTTTCSEEEEE
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccHHHHHHHHHHHHHhcCCCeEEEe
Confidence 35678888 46999999999999999999887654332 21 55542 01 11 12
Q ss_pred CceEEEEEEeC---CCCcHHHHHHHHHHhCCceEEE
Q 017424 68 SDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEK 100 (372)
Q Consensus 68 ~~~~~i~v~~~---DrpGLL~~I~~~L~~~glnI~~ 100 (372)
.+...|.|.|. ++||.++++.++|++.|+||..
T Consensus 93 ~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ 128 (178)
T 2dtj_A 93 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 128 (178)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE
Confidence 45678899986 8999999999999999999987
No 32
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.73 E-value=0.028 Score=48.84 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=72.1
Q ss_pred CceEEEEEE-eCCCCcHHHHHHHHHHhCCceEEEEEEEeeC--CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccc
Q 017424 68 SDVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 144 (372)
Q Consensus 68 ~~~~~i~v~-~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~--~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~ 144 (372)
.+.+.|+|. .+|+||.+++|.+.|+++|+||..-...+.. ++..--.|.+.. ...++..+.|++ +..+
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHHh
Confidence 356788884 5999999999999999999999866543221 222211266543 112333333333 1110
Q ss_pred ccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEEC---CcchHHHH
Q 017424 145 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 221 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~ 221 (372)
. . ...+.++ .+...|.|.|. ++||+++.
T Consensus 84 ~----------------------~-----------------------~~~v~~~----~~~a~VsvVG~gm~~~~Gv~ar 114 (178)
T 2dtj_A 84 G----------------------N-----------------------WTNVLYD----DQVGKVSLVGAGMKSHPGVTAE 114 (178)
T ss_dssp T----------------------T-----------------------CSEEEEE----SCEEEEEEEEECCTTCHHHHHH
T ss_pred c----------------------C-----------------------CCeEEEe----CCeEEEEEEcCCcccCccHHHH
Confidence 0 0 0124433 35688899987 89999999
Q ss_pred HHHHHHhCCceEEE
Q 017424 222 IMRTLKDYNIQVSY 235 (372)
Q Consensus 222 i~~~L~~~~~~I~~ 235 (372)
+.++|++.|+||..
T Consensus 115 if~aLa~~~InI~~ 128 (178)
T 2dtj_A 115 FMEALRDVNVNIEL 128 (178)
T ss_dssp HHHHHHHTTCCCCE
T ss_pred HHHHHHHCCCCEEE
Confidence 99999999999986
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.70 E-value=0.0051 Score=53.08 Aligned_cols=66 Identities=5% Similarity=0.065 Sum_probs=49.0
Q ss_pred eEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeec-CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhc
Q 017424 206 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 206 tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~-g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
..|+|...||||+|++|+.+|++.|+||.+..+.. +. .+...-.|.++. ++..++.|.++|.+...
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~-t~d~g~sritivV~~------d~~~leql~kQL~Kl~d 71 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAP-TEDPTLSRMTLVTNG------PDEIVEQITKQLNKLIE 71 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEE-CSSTTEEEEEEEEEE------CHHHHHHHHHHHHHSTT
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEe-cCCCCEEEEEEEEec------cHHHHHHHHHHhcCCCC
Confidence 57889999999999999999999999999866652 22 233343444432 35678889999876553
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.66 E-value=0.024 Score=48.59 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=72.2
Q ss_pred CceEEEEEEe-CCCCcHHHHHHHHHHhCCceEEEEEEEee--CCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccc
Q 017424 68 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTT--PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 144 (372)
Q Consensus 68 ~~~~~i~v~~-~DrpGLL~~I~~~L~~~glnI~~A~I~T~--~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~ 144 (372)
.+.+.|++.+ +|+||.++++.++|++.|+||..-....+ ..|..-=.|.|... ..++..+.|.+....
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~--------d~~~a~~~L~~~~~~- 84 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD--------FAQEALEALEPVLAE- 84 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG--------GHHHHHHHHHHHHHH-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH--------HHHHHHHHHHHHHHH-
Confidence 4567888887 89999999999999999999986543211 12333234666431 122333334331110
Q ss_pred ccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEECC---cchHHHH
Q 017424 145 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD---HKGLLYD 221 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~D---RpGLL~~ 221 (372)
. . - .+.++ .+...+.+.|.+ +||+++.
T Consensus 85 ~--------------------------------------------~-~-~v~~~----~~~a~vsvVG~gm~~~~Gv~a~ 114 (167)
T 2dt9_A 85 I--------------------------------------------G-G-EAILR----PDIAKVSIVGVGLASTPEVPAK 114 (167)
T ss_dssp H--------------------------------------------C-C-EEEEE----CSEEEEEEEESSGGGSTHHHHH
T ss_pred h--------------------------------------------C-C-cEEEe----CCEEEEEEECCCcccCcCHHHH
Confidence 0 0 0 23332 357889999987 9999999
Q ss_pred HHHHHHhCCceEEE
Q 017424 222 IMRTLKDYNIQVSY 235 (372)
Q Consensus 222 i~~~L~~~~~~I~~ 235 (372)
+..+|.+.|+||..
T Consensus 115 ~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 115 MFQAVASTGANIEM 128 (167)
T ss_dssp HHHHHHHTTCCCCE
T ss_pred HHHHHHHCCCCEEE
Confidence 99999999999964
No 35
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.46 E-value=0.054 Score=47.23 Aligned_cols=110 Identities=16% Similarity=0.195 Sum_probs=71.9
Q ss_pred CceEEEEEEe-CCCCcHHHHHHHHHHhCCceEEEEEEEeeC--CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccc
Q 017424 68 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 144 (372)
Q Consensus 68 ~~~~~i~v~~-~DrpGLL~~I~~~L~~~glnI~~A~I~T~~--~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~ 144 (372)
.+.+.|+|.+ +|+||.+++|.++|+++|+||.--...... +|..--.|.|...+ .++..+.|++ +..+
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~--------~~~a~~~L~~-~~~e 84 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--------GPAAVEKLDS-LRNE 84 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT--------HHHHHHHHHH-THHH
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH--------HHHHHHHHHH-HHHh
Confidence 3566777754 899999999999999999999754432222 35444457665421 1233333333 1110
Q ss_pred ccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEEC---CcchHHHH
Q 017424 145 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 221 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~ 221 (372)
. . ...|.++ .+...|.+.|. ++||+.+.
T Consensus 85 l---------------------------~------------------~~~v~~~----~~va~VsvVG~gm~~~~Gvaa~ 115 (181)
T 3s1t_A 85 I---------------------------G------------------FSQLLYD----DHIGKVSLIGAGMRSHPGVTAT 115 (181)
T ss_dssp H---------------------------C------------------CSEEEEE----SCEEEEEEEEECCTTCHHHHHH
T ss_pred c---------------------------C------------------cceEEEe----CCEEEEEEEecccccCchHHHH
Confidence 0 0 0134433 24678888876 89999999
Q ss_pred HHHHHHhCCceEEE
Q 017424 222 IMRTLKDYNIQVSY 235 (372)
Q Consensus 222 i~~~L~~~~~~I~~ 235 (372)
+.++|++.|+||..
T Consensus 116 ~f~aLa~~~InI~~ 129 (181)
T 3s1t_A 116 FCEALAAVGVNIEL 129 (181)
T ss_dssp HHHHHHHTTCCCCE
T ss_pred HHHHHHHCCCcEEE
Confidence 99999999999986
No 36
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.37 E-value=0.3 Score=50.43 Aligned_cols=162 Identities=17% Similarity=0.246 Sum_probs=106.1
Q ss_pred CCeEEEEEEcC---CCCChHHHHHHHHHhCCCeEEEEEEEE---EEEEec-----------cCC-----C-C--------
Q 017424 18 GDPCVITVNCP---DKTGLGCDLCRIILFFGLSIVRGASVV---LYYRAE-----------MQA-----P-K-------- 66 (372)
Q Consensus 18 ~~~~~v~v~~~---Dr~GL~~~i~~~l~~~~lnI~~a~i~t---~f~v~d-----------~~~-----~-~-------- 66 (372)
.+...|.+++. .+||..+++..+|.+.|.||.-..-+. ++.+.+ ..| + .
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~istSe~~Is~vI~~~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~ 432 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSPPKNQTDTSHL 432 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGGGHHHHHHHHHHHTTCCBCCCCCCCC---C
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEecCCCEEEEEEcHHHHHHHHHHHHHhhcccCCCcccccccccc
Confidence 45678999984 799999999999999999987543111 144442 011 1 0
Q ss_pred --------CCceEEEEEEe-CCCCcHHHHHHHHHHhCCceEEEEEEEeeC---CCe-EEE-EEEEEcCCCCCCCHhHHHH
Q 017424 67 --------PSDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTP---DGK-VMD-LFFVTDTRELLHTRKRKED 132 (372)
Q Consensus 67 --------~~~~~~i~v~~-~DrpGLL~~I~~~L~~~glnI~~A~I~T~~---~~~-~~D-vF~V~~~~g~~~~~~~~~~ 132 (372)
..+...|++.. +|+||+.++|.+.|++.|+||.--...... +|. .-| .|.|.. +..++
T Consensus 433 ~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--------~d~~~ 504 (600)
T 3l76_A 433 PAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--------GDSSQ 504 (600)
T ss_dssp CSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--------HHHHH
T ss_pred CceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--------HHHHH
Confidence 12456777765 899999999999999999999644332221 231 223 365533 22334
Q ss_pred HHHHHHHHHcccccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEE
Q 017424 133 TYEHLKTILGNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVC 212 (372)
Q Consensus 133 l~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~ 212 (372)
..+.|++ +..+. . ..+|.++ ++...|.+.|
T Consensus 505 a~~~l~~-~~~~~----------------------~-----------------------~~~v~~~----~~~akVSiVG 534 (600)
T 3l76_A 505 AEAILQP-LIKDW----------------------L-----------------------DAAIVVN----KAIAKVSIVG 534 (600)
T ss_dssp HHHHHHH-HTTTS----------------------T-----------------------TCEEEEE----CCEEEEEEEC
T ss_pred HHHHHHH-HHHhc----------------------C-----------------------CceEEEe----CCeEEEEEEC
Confidence 4344443 22111 0 1134443 3578888887
Q ss_pred ---CCcchHHHHHHHHHHhCCceEEEEEEe
Q 017424 213 ---QDHKGLLYDIMRTLKDYNIQVSYGRFS 239 (372)
Q Consensus 213 ---~DRpGLL~~i~~~L~~~~~~I~~a~i~ 239 (372)
..+||..+.+.++|++.|+||.. |+
T Consensus 535 ~GM~~~~Gvaa~~f~aL~~~~Ini~m--is 562 (600)
T 3l76_A 535 SGMIGHPGVAAHFFAALAQENINIEM--IA 562 (600)
T ss_dssp GGGTTCTTHHHHHHHHHHTTTCCCCE--EE
T ss_pred cccccCccHHHHHHHHHHHCCCceEE--EE
Confidence 59999999999999999999985 55
No 37
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.27 E-value=0.0079 Score=53.94 Aligned_cols=62 Identities=23% Similarity=0.269 Sum_probs=43.5
Q ss_pred eEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC----CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 70 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP----DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 70 ~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~----~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
...|.+.+.||||+|++|+++|++++.||...+..+.. ++.+.-.+.+.+. .++++.+.|++
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~--------~Le~LL~kLrk 69 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG--------DFEKILERVKT 69 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS--------CHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC--------CHHHHHHHHhC
Confidence 36789999999999999999999999999999997755 5665444555432 24566666655
No 38
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.26 E-value=0.017 Score=50.89 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=48.8
Q ss_pred eEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCC-CeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHH
Q 017424 70 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 140 (372)
Q Consensus 70 ~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~-~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~ 140 (372)
...|+|...|+||.|++|+++|+..|+||.+-.+..+.+ +..--++.|... +..+++|.+.|.+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCc
Confidence 468999999999999999999999999999988865544 555445566432 33456777766653
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.93 E-value=0.034 Score=47.35 Aligned_cols=59 Identities=15% Similarity=0.285 Sum_probs=43.3
Q ss_pred EEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 72 LLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 72 ~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
.|+|.+.||+|||++|+++|+++++||..+.+.+ +|. +++.-+. .+.+....+...+.+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~--~g~----i~~~~~~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP--IGR----IYLNFAE---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET--TTE----EEEEECC---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec--CCE----EEEEEEe---CCHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999943 354 3333221 234455666666655
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.56 E-value=0.049 Score=48.02 Aligned_cols=66 Identities=8% Similarity=0.185 Sum_probs=46.2
Q ss_pred eeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecC-CeEEEEEEEecCCCCCCChhHHHHHHHHHHHHh
Q 017424 205 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG-NCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL 277 (372)
Q Consensus 205 ~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g-~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l 277 (372)
...|+|...|+||.|++|+.+|++.|+||.+-.+.. |.. +...-++.++. ++...+.|.++|.+.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~-ted~gisRitIvV~g------~e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGE-SETPGLSRLVIMVKG------DDKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEE-CSSTTEEEEEEEEEE------CTTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeec-cCCCCEEEEEEEEEC------CHHHHHHHHHHhcCcC
Confidence 478999999999999999999999999999855541 222 22232334432 1345778888876544
No 41
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.43 E-value=0.14 Score=44.59 Aligned_cols=110 Identities=17% Similarity=0.119 Sum_probs=68.5
Q ss_pred CeeEEEEE-ECCcchHHHHHHHHHHhCCceEEEEEEeee-ec--CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcC
Q 017424 204 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRR-QR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 279 (372)
Q Consensus 204 ~~tvi~v~-~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~-t~--g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~ 279 (372)
+.+.|+|. -.|+||.+++|..+|++.|+||.. |+.+ +. .+...-.|++..+ +.++..++-+.+...+.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~--I~q~~s~~~~g~~~isftv~~~-----~~~~a~~~L~~~~~el~- 86 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG- 86 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCC--EEECCCCTTTCEEEEEEEEETT-----THHHHHHHHHHTHHHHC-
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEE--EEecCCcccCCccEEEEEEehh-----HHHHHHHHHHHHHHhcC-
Confidence 45666664 469999999999999999999985 4311 11 2334456666521 22222222222333332
Q ss_pred CceEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEEEEEE
Q 017424 280 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 329 (372)
Q Consensus 280 ~~~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V~~a~ 329 (372)
...+.+. .+ ...+.+.|. ++||+...+..+|.+.|+||....
T Consensus 87 ~~~v~~~-~~-------va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 87 FSQLLYD-DH-------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CSEEEEE-SC-------EEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cceEEEe-CC-------EEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 2222221 11 135777775 899999999999999999996655
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.42 E-value=0.16 Score=45.00 Aligned_cols=112 Identities=18% Similarity=0.210 Sum_probs=70.4
Q ss_pred CceEEEEEEe-CCCCcHHHHHHHHHHhCCceEEEEEEEee--CCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHccc
Q 017424 68 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTT--PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 144 (372)
Q Consensus 68 ~~~~~i~v~~-~DrpGLL~~I~~~L~~~glnI~~A~I~T~--~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~ 144 (372)
.+...|++.+ +|+||++++|.+.|++.|+||.---.... .++...-.|.+... ..++..+.|.+ +..+
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~--------d~~~~~~~l~~-~~~~ 103 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD--------VGPAAVEKLDS-LRNE 103 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG--------GHHHHHHHHHT-THHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh--------hHHHHHHHHHH-HHhh
Confidence 4567888876 89999999999999999999986433211 13344445766431 12222222222 1110
Q ss_pred ccccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEE---CCcchHHHH
Q 017424 145 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVC---QDHKGLLYD 221 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~---~DRpGLL~~ 221 (372)
+ . ...|.++ ++...|.+.| +.+||+...
T Consensus 104 --------------------------~-~------------------~~~v~~~----~~iakVSvVG~GM~~~~GVaak 134 (200)
T 4go7_X 104 --------------------------I-G------------------FSQLLYD----DHIGKVSLIGAGMRSHPGVTAT 134 (200)
T ss_dssp --------------------------H-C------------------CSEEEEE----CCEEEEEEEEESCTTCHHHHHH
T ss_pred --------------------------h-c------------------eeeEEEe----cCeeeeeeeccccccCCCcHHH
Confidence 0 0 0123333 2345566655 589999999
Q ss_pred HHHHHHhCCceEEEEEEe
Q 017424 222 IMRTLKDYNIQVSYGRFS 239 (372)
Q Consensus 222 i~~~L~~~~~~I~~a~i~ 239 (372)
+..+|++.|+||.. |+
T Consensus 135 ~F~aLa~~~INI~m--Is 150 (200)
T 4go7_X 135 FCEALAAVGVNIEL--IS 150 (200)
T ss_dssp HHHHHHHTTCCCCE--EE
T ss_pred HHHHHHHCCCCEEE--EE
Confidence 99999999999995 55
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.29 E-value=0.83 Score=44.88 Aligned_cols=109 Identities=22% Similarity=0.235 Sum_probs=72.6
Q ss_pred ceEEEEEE-eCCCCcHHHHHHHHHHhCCceEEEEEEEeeC--CCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHcccc
Q 017424 69 DVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 145 (372)
Q Consensus 69 ~~~~i~v~-~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~--~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~ 145 (372)
+.+.|+|. .+|+||.+++|.+.|+++|+||.--...|.. +|..-=.|.|...+ .++..+.|++ +..+.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~--------~~~a~~~l~~-~~~~~ 333 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD--------GRRAMEILKK-LQVQG 333 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT--------HHHHHHHHHH-HHTTT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh--------HHHHHHHHHH-HHHHc
Confidence 45678887 5899999999999999999999866543332 34333346664311 1223333443 22111
Q ss_pred cccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEEC---CcchHHHHH
Q 017424 146 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDI 222 (372)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~i 222 (372)
. ...|.++ .+..++.|.|. ++||.+..+
T Consensus 334 ----------------------~-----------------------~~~v~~~----~~~a~vsvVG~gm~~~~Gv~a~~ 364 (421)
T 3ab4_A 334 ----------------------N-----------------------WTNVLYD----DQVGKVSLVGAGMKSHPGVTAEF 364 (421)
T ss_dssp ----------------------T-----------------------CSEEEEE----CCEEEEEEECGGGTSCTTHHHHH
T ss_pred ----------------------C-----------------------CceEEEe----CCeEEEEEEccCcccCccHHHHH
Confidence 0 0123333 35688888886 899999999
Q ss_pred HHHHHhCCceEEE
Q 017424 223 MRTLKDYNIQVSY 235 (372)
Q Consensus 223 ~~~L~~~~~~I~~ 235 (372)
..+|.+.|+||..
T Consensus 365 f~aL~~~~InI~~ 377 (421)
T 3ab4_A 365 MEALRDVNVNIEL 377 (421)
T ss_dssp HHHHHHTTCCCCE
T ss_pred HHHHHHCCCCEEE
Confidence 9999999999984
No 44
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.14 E-value=0.034 Score=49.87 Aligned_cols=36 Identities=11% Similarity=0.252 Sum_probs=28.5
Q ss_pred eeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEee
Q 017424 205 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSR 240 (372)
Q Consensus 205 ~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~ 240 (372)
...|++.+.||||+|++|+++|+++++||......+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~ 39 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFL 39 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEc
Confidence 367889999999999999999999999999877763
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.50 E-value=0.11 Score=46.00 Aligned_cols=110 Identities=16% Similarity=0.094 Sum_probs=67.4
Q ss_pred CCeeEEEEEE-CCcchHHHHHHHHHHhCCceEEEEEEeee--ec-CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhc
Q 017424 203 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRR--QR-GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 203 ~~~tvi~v~~-~DRpGLL~~i~~~L~~~~~~I~~a~i~~~--t~-g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
.+.+.|+|.+ +|+||++++|..+|++.|+||.. |..+ .. .....-.|.+.. .+.++..++.+.+...+.
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDm--I~Qs~s~~~~~~~~~sftv~~-----~d~~~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSR-----DVGPAAVEKLDSLRNEIG 105 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCC--EECCCCC--CCEEEEEEEEEG-----GGHHHHHHHHHTTHHHHC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEE--EeeccccccccceEEEEecch-----hhHHHHHHHHHHHHhhhc
Confidence 4567777765 79999999999999999999985 5311 11 123334555542 122222333333333332
Q ss_pred CCceEEEeecCCCcceeeeeeEEEEe---CCCCchHHHHHHHHHhCCeEEEEE
Q 017424 279 QPLRVTVVSRGPDTELLVANPVELSG---KGRPLVFHDITLALKMLDICIFSA 328 (372)
Q Consensus 279 ~~~~v~i~~~g~~~~~~~~~~~~v~~---~DRpgll~dvt~~L~~~~~~V~~a 328 (372)
. ..+.+. .+ ...+.+.| +.+||+...+-.+|.+.|+||..-
T Consensus 106 ~-~~v~~~-~~-------iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 106 F-SQLLYD-DH-------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp C-SEEEEE-CC-------EEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred e-eeEEEe-cC-------eeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 1 122211 11 12466666 689999999999999999999433
No 46
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=93.67 E-value=0.64 Score=45.70 Aligned_cols=107 Identities=18% Similarity=0.166 Sum_probs=67.2
Q ss_pred CeeEEEEE-ECCcchHHHHHHHHHHhCCceEEEEEEeeeec---CCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcC
Q 017424 204 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 279 (372)
Q Consensus 204 ~~tvi~v~-~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~---g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~ 279 (372)
+.+.|+|. -.|+||.+++|...|++.|+||.. |+.++. .+...=.|.+.. .+.++..++-+.+...+..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~--I~q~~s~~~~g~~~isf~v~~-----~~~~~a~~~l~~~~~~~~~ 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVFSVEDGTTDITFTCPR-----SDGRRAMEILKKLQVQGNW 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEE--EEECCCC--CCEEEEEEEEET-----TTHHHHHHHHHHHHTTTTC
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEE--EEccCccccCCcceEEEEEec-----hhHHHHHHHHHHHHHHcCC
Confidence 56778888 589999999999999999999996 431121 122333456652 1232222222223222221
Q ss_pred CceEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEEE
Q 017424 280 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIF 326 (372)
Q Consensus 280 ~~~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V~ 326 (372)
..+.+. .+ ...+.+.|. ++||++..+..+|.+.|+||.
T Consensus 336 -~~v~~~-~~-------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 376 (421)
T 3ab4_A 336 -TNVLYD-DQ-------VGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIE 376 (421)
T ss_dssp -SEEEEE-CC-------EEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCC
T ss_pred -ceEEEe-CC-------eEEEEEEccCcccCccHHHHHHHHHHHCCCCEE
Confidence 122221 11 135778884 899999999999999999996
No 47
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=93.63 E-value=0.31 Score=45.48 Aligned_cols=92 Identities=12% Similarity=0.249 Sum_probs=59.6
Q ss_pred hCCCeEEEEEE------EEEEEEeccCC-C--------CC--CceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEe
Q 017424 43 FFGLSIVRGAS------VVLYYRAEMQA-P--------KP--SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKIST 105 (372)
Q Consensus 43 ~~~lnI~~a~i------~t~f~v~d~~~-~--------~~--~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T 105 (372)
.+||+|+...| .|.|++.-+.. + .+ ..-+.|.+..+|+||-|+++-+.|+.+|+|+.+-.-.-
T Consensus 156 ~ygL~il~~~I~D~~~N~TRF~vl~~~~~~~~~~~~~~~~~~~~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP 235 (283)
T 2qmx_A 156 LYGLDILKENLADEEWNITRFFCIAHENNPDISHLKVRPDVARQKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRP 235 (283)
T ss_dssp HTTCEEEESSCSSCCCCEEEEEEEEETTCCCCTTSSSCCEEEEEEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEE
T ss_pred HcCCceecccCcCCCCCeeeEEEEecCccccccccccCCCCCCceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeE
Confidence 36888887777 23377764222 1 11 23456666668999999999999999999999887765
Q ss_pred eCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 106 TPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 106 ~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..++...-.|||. -+|..-+ +.+++.|.+
T Consensus 236 ~~~~~~~Y~FfvD-~eg~~~d----~~v~~aL~~ 264 (283)
T 2qmx_A 236 SRKKAFEYLFYAD-FIGHRED----QNVHNALEN 264 (283)
T ss_dssp CSSSTTEEEEEEE-EESCTTS----HHHHHHHHH
T ss_pred cCCCCcceEEEEE-EecCCCc----HHHHHHHHH
Confidence 5544334557773 3555322 345555554
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=92.50 E-value=1.6 Score=43.52 Aligned_cols=114 Identities=14% Similarity=0.204 Sum_probs=71.2
Q ss_pred ceEEEEEEe---CCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHcccc
Q 017424 69 DVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 145 (372)
Q Consensus 69 ~~~~i~v~~---~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~ 145 (372)
+.+.|+|.+ .++||+++++.++|+++|+||..-...+.... =.|.|... ..++..+.|.+.+-+.
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~---Is~~V~~~--------d~~~a~~~L~~~l~~~- 384 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETN---ISLVVSEE--------DVDKALKALKREFGDF- 384 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCC---EEEEEEGG--------GHHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCE---EEEEEech--------HHHHHHHHHHHHHhhh-
Confidence 566889987 67889999999999999999986654232211 23666431 1234444455444110
Q ss_pred cccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEEC---CcchHHHHH
Q 017424 146 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDI 222 (372)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~i 222 (372)
.+ +.|..+ . . -..|.++ .+..++.|.|. ++||.+..+
T Consensus 385 ----------------------~~---~~~~~~------~----~-~~~v~~~----~~~a~vsvVG~gm~~~~Gvaak~ 424 (473)
T 3c1m_A 385 ----------------------GK---KSFLNN------N----L-IRDVSVD----KDVCVISVVGAGMRGAKGIAGKI 424 (473)
T ss_dssp ----------------------------CTTSC------C----C-EEEEEEE----EEEEEEEEECTTTTTCTTHHHHH
T ss_pred ----------------------cc---cccccc------c----c-cceEEEe----CCcEEEEEEecCCCCChhHHHHH
Confidence 00 000000 0 0 0134432 35688999986 599999999
Q ss_pred HHHHHhCCceEE
Q 017424 223 MRTLKDYNIQVS 234 (372)
Q Consensus 223 ~~~L~~~~~~I~ 234 (372)
..+|.+.|+||.
T Consensus 425 f~aL~~~~InI~ 436 (473)
T 3c1m_A 425 FTAVSESGANIK 436 (473)
T ss_dssp HHHHHHHTCCCC
T ss_pred HHHHHHCCCCEE
Confidence 999999999996
No 49
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.40 E-value=0.5 Score=47.93 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=50.1
Q ss_pred CCCCeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHH
Q 017424 201 LSPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSS 271 (372)
Q Consensus 201 ~~~~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~ 271 (372)
..+.++.+-+.-.|+||.+..|+..|.++|+||...++.....|+.+.-++.++. ++ +++.+++|++
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~---~~-~~~~l~~l~~ 516 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ---DV-PDDVRTAIAA 516 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS---CC-CHHHHHHHHH
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC---CC-CHHHHHHHhc
Confidence 3456788889999999999999999999999999988875445666666666653 34 4555555543
No 50
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=92.24 E-value=0.89 Score=43.01 Aligned_cols=81 Identities=10% Similarity=0.085 Sum_probs=54.8
Q ss_pred hCC-CeEEEEEEE------EEEEEeccCC--CC--CCceEEEEEEeC-CCCcHHHHHHHHHHhCCceEEEEEEEeeCCCe
Q 017424 43 FFG-LSIVRGASV------VLYYRAEMQA--PK--PSDVFLLKLSCY-DRKGLLYDVTAVLCELELTIEKVKISTTPDGK 110 (372)
Q Consensus 43 ~~~-lnI~~a~i~------t~f~v~d~~~--~~--~~~~~~i~v~~~-DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~ 110 (372)
.+| |+|+...|- |.|++.-+.. +. ..+-|.|.+..+ |+||-|+++-+.|+.+|+|+.+-.-.-+.++.
T Consensus 163 ~Yg~L~il~~~I~D~~~N~TRFlvl~~~~~~~~~~~~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~ 242 (313)
T 3mwb_A 163 EQPGLNVLAEDIGDNPDAVTRFILVSRPGALPERTGADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYL 242 (313)
T ss_dssp HCTTCEEEESCCCSCTTCEEEEEEEECSCCCCCCCSSEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSST
T ss_pred HcCChhhhhhcccCCCcceeEEEEEecCCCCCCCCCCCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCC
Confidence 478 999988883 3388765321 21 234566667775 99999999999999999999877765444332
Q ss_pred EEEEEEEEcCCCCC
Q 017424 111 VMDLFFVTDTRELL 124 (372)
Q Consensus 111 ~~DvF~V~~~~g~~ 124 (372)
..=.|||. -+|..
T Consensus 243 ~~Y~FfiD-~eg~~ 255 (313)
T 3mwb_A 243 GHYFFSID-ADGHA 255 (313)
T ss_dssp TSEEEEEE-EESCT
T ss_pred ccEEEEEE-EeCCC
Confidence 22347773 35553
No 51
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=91.98 E-value=0.63 Score=46.53 Aligned_cols=107 Identities=17% Similarity=0.117 Sum_probs=70.0
Q ss_pred CCeeEEEEEE---CCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHh--
Q 017424 203 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL-- 277 (372)
Q Consensus 203 ~~~tvi~v~~---~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l-- 277 (372)
.+.+.|+|.+ .++||+++++..+|++.|+||.. |+ .......=.|.|.. +..++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~--Is--Q~tse~~Is~~V~~--------~d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVIL--IS--QGSSETNISLVVSE--------EDVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEE--EE--ECCTTCCEEEEEEG--------GGHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEE--EE--ecCCCCEEEEEEec--------hHHHHHHHHHHHHHhh
Confidence 3578899987 68899999999999999999995 43 11111223456652 12344555555555
Q ss_pred ------cCCc---eEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEEEEEE
Q 017424 278 ------LQPL---RVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 329 (372)
Q Consensus 278 ------~~~~---~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V~~a~ 329 (372)
.... .+.+. . -...+.+.|. ++||++..+..+|.+.|+||..-.
T Consensus 384 ~~~~~~~~~~~~~~v~~~-~-------~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mis 439 (473)
T 3c1m_A 384 FGKKSFLNNNLIRDVSVD-K-------DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIA 439 (473)
T ss_dssp ----CTTSCCCEEEEEEE-E-------EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEE
T ss_pred hcccccccccccceEEEe-C-------CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEe
Confidence 3211 11111 0 1135788885 599999999999999999994443
No 52
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.32 E-value=0.55 Score=46.01 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=42.3
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEc
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 119 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~ 119 (372)
+...|.+.-.|+||.+..|+.+|.++|+||......+ .++.++-++.|..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 4557888899999999999999999999999999976 7788866666643
No 53
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=91.08 E-value=1.5 Score=40.46 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=51.2
Q ss_pred hCCCeEEEEEEE------EEEEEeccCCCCCCceEEEEEEe---CCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEE
Q 017424 43 FFGLSIVRGASV------VLYYRAEMQAPKPSDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMD 113 (372)
Q Consensus 43 ~~~lnI~~a~i~------t~f~v~d~~~~~~~~~~~i~v~~---~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~D 113 (372)
.+||+|+...|- |.|++.-+..+....-+.|-+.. +|+||-|+++-+.|+.+|+|+.+-.-.-..++...-
T Consensus 153 ~ygL~il~~~I~D~~~N~TRF~vl~~~~~~~~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y 232 (267)
T 2qmw_A 153 AYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMY 232 (267)
T ss_dssp GGTCCEEEECCCSCSCCEEEEEEEESCCCCCSSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCE
T ss_pred HCCCcEeeccccCCCCCceEEEEEecCCCCCCCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccE
Confidence 357777776662 23777642221113445566666 899999999999999999999987776554443334
Q ss_pred EEEEEc
Q 017424 114 LFFVTD 119 (372)
Q Consensus 114 vF~V~~ 119 (372)
.|||.-
T Consensus 233 ~FfiD~ 238 (267)
T 2qmw_A 233 RFFVQA 238 (267)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 477744
No 54
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.56 E-value=1 Score=45.64 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=46.5
Q ss_pred CceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEee-CCCeEEEEEEEEcCCCCCCCHhHHHHH
Q 017424 68 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDT 133 (372)
Q Consensus 68 ~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~-~~~~~~DvF~V~~~~g~~~~~~~~~~l 133 (372)
+....+.+.-+|+||.+.+|+..|.++|+||...++... .++.++-++.+.+ .++++.+++|
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~----~~~~~~l~~l 514 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ----DVPDDVRTAI 514 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS----CCCHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC----CCCHHHHHHH
Confidence 456788888999999999999999999999999999654 3566765666533 2444444444
No 55
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.96 E-value=2 Score=40.84 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=42.5
Q ss_pred eEEEEEEC--CcchHHHHHHHHHHhCCceEEEEEEeeeecCC-eEEEEEEEecCCCCCCChhHHHHHHHHHHHH
Q 017424 206 TLVQIVCQ--DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGN-CEIDLFIMQADGKKIVDPSKQNGLSSRLWME 276 (372)
Q Consensus 206 tvi~v~~~--DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~-~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~ 276 (372)
+.+-+... |+||-|+++-..|+.+|+|..+ |.+..... ...=.|||+.+|..- |+ .++++|.++
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~eg~~~-d~----~v~~AL~~L 273 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTS--FISRPIKGRTGTYSFIVTLDAAPW-EE----RFRDALVEI 273 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEE--EEEEEETTEEEEEEEEEEESSCTT-SH----HHHHHHHHH
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEE--EEeeECCCCCccEEEEEEEeCCcC-CH----HHHHHHHHH
Confidence 43334443 7999999999999999999984 76333333 345578998777652 33 345555443
No 56
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.92 E-value=0.79 Score=44.87 Aligned_cols=49 Identities=6% Similarity=0.186 Sum_probs=41.1
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEe
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ 254 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~ 254 (372)
++..|-+.-.|+||.+..|+.+|.++|+||....+. +.|+.+.-++-++
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~--r~g~~A~~vidvD 378 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQ--TSAQMGYVVIDIE 378 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEE--ECSSEEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhcc--CCCCEEEEEEEcC
Confidence 344566888999999999999999999999988877 7788777777665
No 57
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=89.56 E-value=1.1 Score=41.87 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=41.4
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecC-CeEEEEEEEecCCCC
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG-NCEIDLFIMQADGKK 259 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g-~~~~d~F~v~~~g~~ 259 (372)
+.|.|-+.-+|+||-|+++-..|+.+|+|..+ |.+.... ....=.|||+.+|..
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTK--IESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTEEEEEEEEESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeE--EEeeEcCCCCcceEEEEEEecCC
Confidence 45677777789999999999999999999995 7632222 235668899877765
No 58
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.36 E-value=1.5 Score=43.16 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=40.4
Q ss_pred CceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEc
Q 017424 68 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 119 (372)
Q Consensus 68 ~~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~ 119 (372)
++...|.+.-.|.||.|.+|..+|+++|+||..-...| .++.+ |.+.|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~---y~~~d 388 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT-DGEVG---YLVME 388 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCE---EEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC-CCceE---EEEEE
Confidence 35689999999999999999999999999999888755 57777 44444
No 59
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.53 E-value=1.5 Score=43.53 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=70.8
Q ss_pred CeeEEEEEE---CCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcCC
Q 017424 204 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 280 (372)
Q Consensus 204 ~~tvi~v~~---~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~~ 280 (372)
+.+.|+|.+ .+.||.+++|..+|++.+++|.. |+ + +. ..-.|.+..+ .+. ...+++.+.|...+. .
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~--~-~~-~~is~~V~~~--d~~--~~~~~~~~el~~~~~-~ 365 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MP--S-GV-DSVSLVIEDC--KLD--GKCDKIIEEIKKQCN-P 365 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BC--E-ET-TEEEEEEEHH--HHT--TTHHHHHHHHHHHSC-C
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--Ee--c-CC-CEEEEEEecc--hHH--HHHHHHHHHHHHhcC-C
Confidence 567899987 58999999999999999999985 44 2 11 1234666521 010 023445555554443 1
Q ss_pred ceEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEEEEEEEe
Q 017424 281 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 331 (372)
Q Consensus 281 ~~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V~~a~i~ 331 (372)
..+.+.. -...+.+.|. .+||+...+..+|.+.|+||..-.-+
T Consensus 366 ~~v~v~~--------~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqg 411 (446)
T 3tvi_A 366 DSIEIHP--------NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQG 411 (446)
T ss_dssp SEEEEEE--------EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcEEEeC--------CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEec
Confidence 1222211 1236788885 58999999999999999999554443
No 60
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=86.90 E-value=2.3 Score=42.18 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=62.4
Q ss_pred CeEEEEEEc---CCCCChHHHHHHHHHhCCCeEEEEEEEE--E-EEEecc---------------CCC-----CCCceEE
Q 017424 19 DPCVITVNC---PDKTGLGCDLCRIILFFGLSIVRGASVV--L-YYRAEM---------------QAP-----KPSDVFL 72 (372)
Q Consensus 19 ~~~~v~v~~---~Dr~GL~~~i~~~l~~~~lnI~~a~i~t--~-f~v~d~---------------~~~-----~~~~~~~ 72 (372)
+.+.|++.+ ++.+|..+++.+.|+++|+||.--.... . |.+.+. .+. ...+...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~~~is~~V~~~d~~~~~~~~~~el~~~~~~~~v~v~~~vA~ 376 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGVDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMAL 376 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEETTEEEEEEEHHHHTTTHHHHHHHHHHHSCCSEEEEEEEEEE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCCCEEEEEEecchHHHHHHHHHHHHHHhcCCCcEEEeCCeEE
Confidence 345677775 6999999999999999999997432111 1 666430 011 1235678
Q ss_pred EEEEeC---CCCcHHHHHHHHHHhCCceEEEEEE
Q 017424 73 LKLSCY---DRKGLLYDVTAVLCELELTIEKVKI 103 (372)
Q Consensus 73 i~v~~~---DrpGLL~~I~~~L~~~glnI~~A~I 103 (372)
|.++|. ..||+.+++.++|++.|+||....-
T Consensus 377 VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 377 VATVGTGMAKTKGIANKIFTALSKENVNIRMIDQ 410 (446)
T ss_dssp EEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECCCccCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 999985 5899999999999999999986553
No 61
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=86.84 E-value=2.1 Score=40.48 Aligned_cols=55 Identities=25% Similarity=0.405 Sum_probs=41.0
Q ss_pred CCeeEEEEEEC-CcchHHHHHHHHHHhCCceEEEEEEeeeecC-CeEEEEEEEecCCCC
Q 017424 203 PGHTLVQIVCQ-DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG-NCEIDLFIMQADGKK 259 (372)
Q Consensus 203 ~~~tvi~v~~~-DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g-~~~~d~F~v~~~g~~ 259 (372)
.+.|.|-+.-+ |+||-|+++-..|+.+|+|..+ |.+.... ....=.|||+.+|..
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSR--IESRPTGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTSEEEEEEEESCT
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEE--EEEeecCCCCccEEEEEEEeCCC
Confidence 35677777775 9999999999999999999984 6632222 223458899877765
No 62
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=86.39 E-value=1.9 Score=43.52 Aligned_cols=109 Identities=13% Similarity=0.123 Sum_probs=69.0
Q ss_pred CeeEEEEEE---CCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEec-CCCCCC-ChhHHHHHHHHHHHHhc
Q 017424 204 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQA-DGKKIV-DPSKQNGLSSRLWMELL 278 (372)
Q Consensus 204 ~~tvi~v~~---~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~-~g~~l~-~~~~~~~l~~~L~~~l~ 278 (372)
+.+.|+|.+ .++||.+++|..+|+++|++|.. |.++ ...=.|++.. +..+.. ..+.++++ .+.+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~--I~ss----e~sis~~v~~~~~~~~~~~~~~l~~~----~~el~ 409 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDV--VATS----EVSISLTLDPSKLWSRELIQQELDHV----VEELE 409 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEE--EEEE----TTEEEEEECCGGGSSSCCCHHHHHHH----HHHHT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEE--EEeC----CCeEEEEEechHhhhhhHHHHHHHHH----HHHhC
Confidence 578899987 68999999999999999999996 5522 1222456642 211110 12223333 33333
Q ss_pred CCceEEEeecCCCcceeeeeeEEEEeC--CCCchHHHHHHHHHhCCeEEEEEEE
Q 017424 279 QPLRVTVVSRGPDTELLVANPVELSGK--GRPLVFHDITLALKMLDICIFSAEI 330 (372)
Q Consensus 279 ~~~~v~i~~~g~~~~~~~~~~~~v~~~--DRpgll~dvt~~L~~~~~~V~~a~i 330 (372)
....+.+. .+ ...+.+.|. .+||+...+..+|.+.|+||..-.-
T Consensus 410 ~~~~v~~~-~~-------~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsq 455 (510)
T 2cdq_A 410 KIAVVNLL-KG-------RAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQ 455 (510)
T ss_dssp TTSEEEEE-EE-------EEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred CCCeEEEe-CC-------cEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 21223321 11 235777887 7899999999999999999954433
No 63
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=85.81 E-value=2.4 Score=39.04 Aligned_cols=52 Identities=27% Similarity=0.428 Sum_probs=39.7
Q ss_pred CCeeEEEEEE---CCcchHHHHHHHHHHhCCceEEEEEEeeeecC-CeEEEEEEEecC
Q 017424 203 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG-NCEIDLFIMQAD 256 (372)
Q Consensus 203 ~~~tvi~v~~---~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g-~~~~d~F~v~~~ 256 (372)
.+.|.|-+.. .|+||-|+++-..|+.+|+|..+ |.+.... ....=.|||+.+
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSW--IESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTCEEEEEEES
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeE--EEEeecCCCCccEEEEEEEe
Confidence 4567777777 89999999999999999999995 7632222 234568899865
No 64
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=84.82 E-value=5.3 Score=37.91 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=39.6
Q ss_pred CCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 79 DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 79 DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
|+||-|+++-+.|+.+|+|+.+-.-.-+.++...=+||| |-+|..-+ ..++++|++
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d----~~v~~AL~~ 272 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWE----ERFRDALVE 272 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTS----HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCC----HHHHHHHHH
Confidence 799999999999999999999877765555444456776 44665433 234444444
No 65
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=84.80 E-value=1.8 Score=36.20 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=61.7
Q ss_pred CeeEEEEEEC---CcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcCC
Q 017424 204 GHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 280 (372)
Q Consensus 204 ~~tvi~v~~~---DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~~ 280 (372)
+.+.|+|.+. |+||.++++..+|++.|+||.. |+ +... .=.|++..+ + +.+++.+.| ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~--I~--~s~~--~Isf~v~~~-----~--~~~~il~~l----~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM--VA--TSEV--GVSLTIDND-----K--NLPDIVRAL----SDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC--EE--CCSS--EEEEEESCC-----T--THHHHHHHH----TTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE--EE--ecCC--EEEEEECCh-----H--HHHHHHHHH----hcc
Confidence 5678888854 7999999999999999999985 55 2221 234555421 1 223333333 222
Q ss_pred ceEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEEEEEEE
Q 017424 281 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEI 330 (372)
Q Consensus 281 ~~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V~~a~i 330 (372)
..+.+. .+ ...+.+.|. ++||+...+..+|. |++|..-.-
T Consensus 80 ~~v~~~-~~-------~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isq 122 (157)
T 3mah_A 80 GDVTVD-KD-------MVIICIVGDMEWDNVGFEARIINALK--GVPVRMISY 122 (157)
T ss_dssp EEEEEE-EE-------EEEEEEEC------CCHHHHHHHTTT--TSCCSEEEE
T ss_pred CeEEEe-CC-------eEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEee
Confidence 222221 11 135777775 68999999999999 888854443
No 66
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=82.91 E-value=23 Score=35.56 Aligned_cols=108 Identities=14% Similarity=0.215 Sum_probs=67.2
Q ss_pred ceEEEEEEe---CCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHcccc
Q 017424 69 DVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 145 (372)
Q Consensus 69 ~~~~i~v~~---~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~~~ 145 (372)
+.+.|+|.+ .++||++++|.++|+++|+||..-. |..... .|.|...+....+. ..+.++. +.+.|..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--sse~si---s~~v~~~~~~~~~~-~~~~l~~-~~~el~~-- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TSEVSI---SLTLDPSKLWSREL-IQQELDH-VVEELEK-- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EETTEE---EEEECCGGGSSSCC-CHHHHHH-HHHHHTT--
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eCCCeE---EEEEechHhhhhhH-HHHHHHH-HHHHhCC--
Confidence 456788886 6899999999999999999998763 332222 25553321110000 0111111 1111111
Q ss_pred cccccccccceeeccccCCCCChhhHHhhhcccCCCCCCCCCCCCCCcEEEEeCCCCCCeeEEEEEEC--CcchHHHHHH
Q 017424 146 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ--DHKGLLYDIM 223 (372)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~--DRpGLL~~i~ 223 (372)
-..|.++ .+..+|.+.|. ..||+...+.
T Consensus 411 ----------------------------------------------~~~v~~~----~~~a~VsiVG~m~~~~Gvaa~~f 440 (510)
T 2cdq_A 411 ----------------------------------------------IAVVNLL----KGRAIISLIGNVQHSSLILERAF 440 (510)
T ss_dssp ----------------------------------------------TSEEEEE----EEEEEEEEEECGGGHHHHHHHHH
T ss_pred ----------------------------------------------CCeEEEe----CCcEEEEEEEECCCChhHHHHHH
Confidence 0123332 24678888887 8899999999
Q ss_pred HHHHhCCceEEE
Q 017424 224 RTLKDYNIQVSY 235 (372)
Q Consensus 224 ~~L~~~~~~I~~ 235 (372)
.+|.+.|+||..
T Consensus 441 ~aL~~~~InI~m 452 (510)
T 2cdq_A 441 HVLYTKGVNVQM 452 (510)
T ss_dssp HHHHHHTCCCSE
T ss_pred HHHHHCCCCEEE
Confidence 999999999984
No 67
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=77.36 E-value=12 Score=36.58 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=40.1
Q ss_pred CCeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEE
Q 017424 203 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIM 253 (372)
Q Consensus 203 ~~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v 253 (372)
+..+-|.+.-.|+||.|..|..+|+++|+||..-... |.|+-++-+.-+
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEe
Confidence 3567888999999999999999999999999985555 788865555444
No 68
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=77.33 E-value=4.6 Score=39.96 Aligned_cols=51 Identities=24% Similarity=0.544 Sum_probs=35.6
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeC-CCeEEEEEEEEc
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTD 119 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~-~~~~~DvF~V~~ 119 (372)
..+-+.+...|+||.|++|+++|.++|++|.+..-.-.. ++....+..+|.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 356788889999999999999999999999886542111 111245666665
No 69
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=76.01 E-value=1.8 Score=36.22 Aligned_cols=83 Identities=13% Similarity=0.086 Sum_probs=57.5
Q ss_pred CeEEEEEEc---CCCCChHHHHHHHHHhCCCeEEEEEEEE--E-EEEeccC-----------C---CCCCceEEEEEEeC
Q 017424 19 DPCVITVNC---PDKTGLGCDLCRIILFFGLSIVRGASVV--L-YYRAEMQ-----------A---PKPSDVFLLKLSCY 78 (372)
Q Consensus 19 ~~~~v~v~~---~Dr~GL~~~i~~~l~~~~lnI~~a~i~t--~-f~v~d~~-----------~---~~~~~~~~i~v~~~ 78 (372)
+...|++.+ +++||..+++.+.|+++|+||.--..+. . |.+.+.. + ....+...|.+.|.
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~~~Isf~v~~~~~~~~il~~l~~~~~v~~~~~~a~vsvvG~ 96 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSEVGVSLTIDNDKNLPDIVRALSDIGDVTVDKDMVIICIVGD 96 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCSSEEEEEESCCTTHHHHHHHHTTTEEEEEEEEEEEEEEEC-
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecCCEEEEEECChHHHHHHHHHHhccCeEEEeCCeEEEEEECC
Confidence 467788874 6888999999999999999985332211 1 6665411 0 01235668888875
Q ss_pred ---CCCcHHHHHHHHHHhCCceEEEEEE
Q 017424 79 ---DRKGLLYDVTAVLCELELTIEKVKI 103 (372)
Q Consensus 79 ---DrpGLL~~I~~~L~~~glnI~~A~I 103 (372)
++||+.+++.++|+ |+||....-
T Consensus 97 gm~~~~gv~a~~f~aL~--~Ini~~isq 122 (157)
T 3mah_A 97 MEWDNVGFEARIINALK--GVPVRMISY 122 (157)
T ss_dssp -----CCHHHHHHHTTT--TSCCSEEEE
T ss_pred CcccCccHHHHHHHHhC--CCCeEEEee
Confidence 68999999999999 999886543
No 70
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=72.04 E-value=3.6 Score=40.76 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=28.7
Q ss_pred CeeEEEEEECCcchHHHHHHHHHHhCCceEEE
Q 017424 204 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSY 235 (372)
Q Consensus 204 ~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~ 235 (372)
..+-+.+...|+||.|.+|+.+|.++|++|.+
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~ 389 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDA 389 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeE
Confidence 46788899999999999999999999999986
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=64.29 E-value=11 Score=36.98 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=39.1
Q ss_pred CCCeeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeec-CCeEEEEEEEecC
Q 017424 202 SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQAD 256 (372)
Q Consensus 202 ~~~~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~-g~~~~d~F~v~~~ 256 (372)
....|.|-+..+|+||-|+++-..|+.+|+|+.+ |.+... +....=.|||+.+
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTk--IESRPsk~~~~eY~FfVD~e 84 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTH--IESRPSRLNKDEYEFFTYLD 84 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTS--EEEEECSSCTTEEEEEECBC
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEE--EEeeecCCCCccEEEEEEEe
Confidence 3456777777789999999999999999999984 653222 2334568899854
No 72
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=48.25 E-value=73 Score=23.82 Aligned_cols=55 Identities=18% Similarity=0.178 Sum_probs=41.0
Q ss_pred EEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHH
Q 017424 75 LSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 139 (372)
Q Consensus 75 v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~ 139 (372)
..+.=-+.++.++.++|.++|+ .|+|...++|.+ |.++++ .++.+++++..-|.+
T Consensus 23 ~TGgfg~~~v~ev~~am~~~g~---~gkii~~~dGl~---y~~T~~----~s~~eLdk~t~wLD~ 77 (85)
T 2l48_A 23 QSGAFSPYETPDVMGALTSLKM---TADFILQSDGLT---YFISKP----TSDAQLKAMKEYLDR 77 (85)
T ss_dssp EECCBCTTTHHHHHHHHHHTTC---CEEEEECTTSCE---EEEECC----CCHHHHHHHHHHHHH
T ss_pred EecccCHHHHHHHHHHHHHcCc---eEEEEECCCceE---EEEeCC----CCHHHHHHHHHHHhc
Confidence 3455567899999999999999 588877677766 668773 446677777776654
No 73
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=46.15 E-value=72 Score=25.57 Aligned_cols=99 Identities=8% Similarity=0.061 Sum_probs=61.3
Q ss_pred EcCCCCChHHHHHHHHHhCCCeEEEEEEEEEEEEeccCCCCCCceEEEEEEeCCCCcHHHHHHHHHHhCCce--EEEEEE
Q 017424 26 NCPDKTGLGCDLCRIILFFGLSIVRGASVVLYYRAEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELT--IEKVKI 103 (372)
Q Consensus 26 ~~~Dr~GL~~~i~~~l~~~~lnI~~a~i~t~f~v~d~~~~~~~~~~~i~v~~~DrpGLL~~I~~~L~~~gln--I~~A~I 103 (372)
..-+-.-...++..+|...|+.|.+-+ .+.+.+.|....+| +|+++++.. ....+. -..-.+
T Consensus 19 l~~~fdraW~rvg~ALdr~Gf~V~Drd-------------rs~G~y~V~Y~~~~-~gf~~~lg~--~~~~~~~~~Y~i~v 82 (127)
T 2yh5_A 19 VRGPFNVVWQRLPAALEKVGMKVTDST-------------RSQGNMAVTYKPLS-DSDWQELGA--SDPGLASGDYKLQV 82 (127)
T ss_dssp EESCHHHHHHHHHHHHHHTTEEEEEEE-------------GGGTEEEEEECCCC-HHHHHHHTS--CCCCCCSEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHHhCCCeEEeee-------------ccCeEEEEEeCCCC-cchHHHhcC--CCccCCCCCEEEEE
Confidence 444555678889999999999998722 23455666655555 588887711 111111 111223
Q ss_pred EeeCCCeEEEEEEEEcCCCCCCCHhHHHHHHHHHHHHHcc
Q 017424 104 STTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGN 143 (372)
Q Consensus 104 ~T~~~~~~~DvF~V~~~~g~~~~~~~~~~l~~~L~~~L~~ 143 (372)
... ++. -...|.|.+|.+++.+..++|-..|.+.|..
T Consensus 83 ~~~-g~~--t~V~v~d~~G~p~~~~~a~~ll~~L~~~l~~ 119 (127)
T 2yh5_A 83 GDL-DNR--SSLQFIDPKGHTLTQSQNDALVAVFQAAFSK 119 (127)
T ss_dssp EEE-TTE--EEEEEECTTSCBCCHHHHHHHHHHHHHHHHH
T ss_pred EeC-CCc--eEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 222 333 2467789999988887778887877777653
No 74
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=42.91 E-value=37 Score=26.02 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=32.3
Q ss_pred chHHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 309 LVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 309 gll~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
.=+..+...|++.|+.+...-..+.. + ..|....||+.|++|+.+.
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~-~-~~~~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFE-G-LIEEHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEST-T-STTCEEEEEEECTTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCcccccC-C-CCCceEEEEEECCCCCEEE
Confidence 44677788899999999776655411 1 1224467999999999775
No 75
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=42.07 E-value=34 Score=33.53 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=36.9
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEE
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVT 118 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~ 118 (372)
.-+.|-+..+|+||-|+++-+.|+.+|+|+.+-.-.-+.++...=.|+|.
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD 82 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTY 82 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEEC
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEE
Confidence 34666666789999999999999999999987665544433333457773
No 76
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=41.21 E-value=71 Score=25.92 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=39.1
Q ss_pred CeeEEEEEEC---CcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHH
Q 017424 204 GHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 274 (372)
Q Consensus 204 ~~tvi~v~~~---DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~ 274 (372)
.+-.|+|.+. |-.|+++.++..|++.|+.|.. |+ |+.. |-..|. .++.++..+.|.
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iS--ty~t---D~IlVp--------~~~~~~Ai~aL~ 119 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VS--TFDG---DHLLVR--------SNDLEKTADLLA 119 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EE--CSSC---EEEEEE--------GGGHHHHHHHHH
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EE--eccc---cEEEEe--------HHHHHHHHHHHH
Confidence 4557777655 8889999999999999999995 77 5543 333442 334555555554
No 77
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=36.68 E-value=1.6e+02 Score=29.29 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=67.3
Q ss_pred eeEEEEEECCcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEE-EecCCCCCCC-hhHHHHHHHHHHHHhcCCce
Q 017424 205 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFI-MQADGKKIVD-PSKQNGLSSRLWMELLQPLR 282 (372)
Q Consensus 205 ~tvi~v~~~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~-v~~~g~~l~~-~~~~~~l~~~L~~~l~~~~~ 282 (372)
...+.+.-+||||-|.+++.+|. +-||.+-.-. ........+|. +. +.+ ++..++|.++|.+ .+..
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~--~~~~~~~~~~~~~e-----~~~~~~~~~~~~~~l~~---~g~~ 405 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYR--FADAKNACIFVGVR-----LSRGLEERKEILQMLND---GGYS 405 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEE--CCCSSBCEEEEEEE-----CSSTHHHHHHHHHHHTS---SSCE
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEee--ccCCCeEEEEEEEE-----eCCcHHHHHHHHHHHHh---CCCC
Confidence 45677888999999999999888 6788753332 11112233332 33 224 5677777777652 2222
Q ss_pred EEEeec-------------CCCcceeeeeeEEEEeCCCCchHHHHHHHHH-hCCeEEEE
Q 017424 283 VTVVSR-------------GPDTELLVANPVELSGKGRPLVFHDITLALK-MLDICIFS 327 (372)
Q Consensus 283 v~i~~~-------------g~~~~~~~~~~~~v~~~DRpgll~dvt~~L~-~~~~~V~~ 327 (372)
+.-.+. |-.+.+.-...+...=++|||=|.....+|. +-+|+.||
T Consensus 406 ~~~~~~~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~~~~i~~~~ 464 (514)
T 1tdj_A 406 VVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFH 464 (514)
T ss_dssp EETTSSCHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCSCCCCCEEE
T ss_pred eEECCCCHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCCCceEEEEe
Confidence 211110 1111111123467777999999999999994 78888887
No 78
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=34.15 E-value=1.6e+02 Score=22.84 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=45.3
Q ss_pred CCeeEEEEEECCcchHHHHHHHHHHhC---CceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHH
Q 017424 203 PGHTLVQIVCQDHKGLLYDIMRTLKDY---NIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 274 (372)
Q Consensus 203 ~~~tvi~v~~~DRpGLL~~i~~~L~~~---~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~ 274 (372)
|-.+.+.|.+.+.+++..+|..++..+ ++.+. .+-+ +.|....=..-+ .+++++++++|-++|.
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~~-~r~S--s~GkY~Svtv~v-----~v~S~eQv~aiY~~L~ 100 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPT-VKPS--SKGNYHSVSITI-----NATHIEQVETLYEELG 100 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCEE-EEES--SCSSEEEEEEEE-----CCSSHHHHHHHHHHHS
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCce-ecCC--CCCeEEEEEEEE-----EECCHHHHHHHHHHHh
Confidence 346899999999999999999999988 77773 3554 666533322223 3456777777777664
No 79
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=31.63 E-value=1.6e+02 Score=22.42 Aligned_cols=59 Identities=15% Similarity=0.275 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCCCCCCChhHHHHHHHHHHHHhcCCceEEE
Q 017424 217 GLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTV 285 (372)
Q Consensus 217 GLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g~~l~~~~~~~~l~~~L~~~l~~~~~v~i 285 (372)
.+++++++.+ +..+||.+|.|. ..++...-.+.+...|. +++.++..+.|. ++.+.+++
T Consensus 36 PiIs~l~~~~-~v~vnIL~g~I~--~i~~~~~G~L~v~l~G~----~~~~~~ai~~L~---~~~v~vEv 94 (106)
T 3dhx_A 36 PLLSETARRF-NVNNNIISAQMD--YAGGVKFGIMLTEMHGT----QQDTQAAIAWLQ---EHHVKVEV 94 (106)
T ss_dssp CHHHHHHHHS-CCEEEEEEEEEE--EETTEEEEEEEEEEESC----HHHHHHHHHHHH---HTTCEEEE
T ss_pred hHHHHHHHHH-CCCEEEEEEEeE--EECCeeEEEEEEEEeCC----HHHHHHHHHHHH---HCCCEEEE
Confidence 4777777766 466899999998 77888777888764442 333344444433 44554443
No 80
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=31.47 E-value=1.6e+02 Score=22.02 Aligned_cols=40 Identities=8% Similarity=0.201 Sum_probs=31.1
Q ss_pred cchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCC
Q 017424 215 HKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG 257 (372)
Q Consensus 215 RpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g 257 (372)
...+++++++.+ +..+||.+|.|. ..++...-.+.+...|
T Consensus 33 ~~PvIs~l~~~~-~v~vnIL~g~I~--~i~~~~~G~L~v~l~G 72 (98)
T 3ced_A 33 TEPIVSSLSTAY-DIKINILEANIK--NTKNGTVGFLVLHIPY 72 (98)
T ss_dssp HHHHHHHHHHHH-TCCCEEEEEEEE--EETTEEEEEEEEEESC
T ss_pred CchHHHHHHHHH-CCcEEEEEEEeE--EeCCEeEEEEEEEEeC
Confidence 356778887777 588999999998 7788777778877545
No 81
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=31.45 E-value=27 Score=34.32 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=64.7
Q ss_pred CCeeEEEEEEC---CcchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEec-CCCCCCChhHHHHHHHHHHHHhc
Q 017424 203 PGHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQA-DGKKIVDPSKQNGLSSRLWMELL 278 (372)
Q Consensus 203 ~~~tvi~v~~~---DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~-~g~~l~~~~~~~~l~~~L~~~l~ 278 (372)
.+.+.|+|.+. +.||.+++|..+|.+.+++|.. |+ +. + ..=.|.+.. +...-...+.++++...|.. +.
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~--i~--ss-~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~~ 378 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDL--IT--TS-E-VSVALTLDTTGSTSTGDTLLTQSLLMELSA-LC 378 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSE--EE--EE-T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-HS
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEE--EE--eC-C-CeEEEEEeccccchhhHHHHHHHHHHHhcc-CC
Confidence 35688888874 7899999999999999999985 55 21 1 223466652 21110011234556666553 11
Q ss_pred CCceEEEeecCCCcceeeeeeEEEEeC---CCCchHHHHHHHHHhCCeEE
Q 017424 279 QPLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICI 325 (372)
Q Consensus 279 ~~~~v~i~~~g~~~~~~~~~~~~v~~~---DRpgll~dvt~~L~~~~~~V 325 (372)
. +.+. .+ ...+.+.|. .+||+...+..+|.+ +||
T Consensus 379 -~--v~~~-~~-------~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini 415 (449)
T 2j0w_A 379 -R--VEVE-EG-------LALVALIGNDLSKACGVGKEVFGVLEP--FNI 415 (449)
T ss_dssp -C--EEEE-EE-------EEEEEEEESSCTTSSSHHHHHHSSCTT--SCC
T ss_pred -e--EEEe-CC-------eEEEEEECCCccccccHHHHHHHHHhC--CCe
Confidence 2 2221 11 235788886 689999999999977 555
No 82
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.10 E-value=1.9e+02 Score=21.96 Aligned_cols=49 Identities=20% Similarity=0.121 Sum_probs=36.3
Q ss_pred CceEEEEEEeCCCCcHHHHHHHHHHhCCce-EEEEEEEeeCCCeEEEEEEEEcCCCCC
Q 017424 68 SDVFLLKLSCYDRKGLLYDVTAVLCELELT-IEKVKISTTPDGKVMDLFFVTDTRELL 124 (372)
Q Consensus 68 ~~~~~i~v~~~DrpGLL~~I~~~L~~~gln-I~~A~I~T~~~~~~~DvF~V~~~~g~~ 124 (372)
+..+.+.+...| +.+..+.|.+.|+. +...-. ....|+. |++.|++|+.
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~-~~~~G~~---~~~~DPdGn~ 114 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPT-DMPDGKK---AIVLDPDGHS 114 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEE-ECC-CEE---EEEECTTCCE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCce-eCCCccE---EEEECCCCCE
Confidence 345677888888 88899999999999 765433 3344543 8999999974
No 83
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=28.58 E-value=81 Score=25.55 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCeeEEEEEE---CCcchHHHHHHHHHHhCCceEEEEEEeeeecC
Q 017424 203 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG 244 (372)
Q Consensus 203 ~~~tvi~v~~---~DRpGLL~~i~~~L~~~~~~I~~a~i~~~t~g 244 (372)
..+..|+|.+ -|-.|+++.++..|++.|+.|.. |+ |+.
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iS--ty~ 109 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IA--GYY 109 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EE--CSS
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EE--ecc
Confidence 4567777765 59999999999999999999995 76 554
No 84
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=27.33 E-value=1.9e+02 Score=21.51 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=30.9
Q ss_pred cchHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCC
Q 017424 215 HKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG 257 (372)
Q Consensus 215 RpGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g 257 (372)
...+++++++.+ +..+||.+|.|. ..++...-.+.+...|
T Consensus 36 ~~pvis~l~~~~-~v~vnIl~g~i~--~i~~~~~G~L~v~l~G 75 (100)
T 2qsw_A 36 KLPIISHIVQEY-QVEVSIIQGNIQ--QTKQGAVGSLYIQLLG 75 (100)
T ss_dssp SSCHHHHHHHHH-TCEEEEEEEEEE--EETTEEEEEEEEEEES
T ss_pred CchHHHHHHHHh-CCCEEEEEeece--EcCCeeEEEEEEEEEC
Confidence 356788888877 588999999998 7788777778776434
No 85
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=27.06 E-value=2e+02 Score=21.51 Aligned_cols=49 Identities=14% Similarity=0.303 Sum_probs=34.0
Q ss_pred eEEEEEECCc---chHHHHHHHHHHhCCceEEEEEEeeeecCCeEEEEEEEecCC
Q 017424 206 TLVQIVCQDH---KGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG 257 (372)
Q Consensus 206 tvi~v~~~DR---pGLL~~i~~~L~~~~~~I~~a~i~~~t~g~~~~d~F~v~~~g 257 (372)
.++.+.-... ..+++++++.+ +..+||.+|.|. ..++...-.+.+...|
T Consensus 24 ~lv~l~f~g~~~~~pvis~l~~~~-~v~vnIl~g~i~--~i~~~~~G~L~v~l~G 75 (101)
T 2qrr_A 24 PLVRMEFTGATVDAPLMSQISRKY-NIDVSILSSDLD--YAGGVKFGMMVAELFG 75 (101)
T ss_dssp EEEEEEECTTSCSSCHHHHHHHHS-CCEEEEEEEEEE--EETTEEEEEEEEEEES
T ss_pred EEEEEEEcCCCcCchHHHHHHHHh-CCCEEEEEeeee--EcCCeeEEEEEEEEeC
Confidence 3556655433 45777777765 577899999998 7778777778776434
No 86
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=26.43 E-value=29 Score=27.05 Aligned_cols=55 Identities=13% Similarity=-0.055 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC-----hhhHHHHHHHHHhcc
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP-----RNKIEEGVWKLLMGW 371 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~-----~~~~~~~vr~~~~~~ 371 (372)
+......|++.|+.+... .....|-...||+.|++|+.+. .+.-+++.|+.+..|
T Consensus 79 ~~~~~~~l~~~G~~~~~~------~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~l~~~~~~~~~~ 138 (139)
T 1r9c_A 79 FDRYAERVGKLGLDMRPP------RPRVEGEGRSIYFYDDDNHMFELHTGTLTERLARKAKGLEAA 138 (139)
T ss_dssp HHHHHHHHHHHTCCBCCC------CC-----CCEEEEECTTSCEEEEECCCHHHHHHC--------
T ss_pred HHHHHHHHHHCCCcccCC------cccCCCCeEEEEEECCCCCEEEEEeCChhHHHHHHHHhhhhc
Confidence 566777888999877321 1111234567889999999776 222455666655443
No 87
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=25.89 E-value=1.3e+02 Score=22.90 Aligned_cols=47 Identities=9% Similarity=-0.005 Sum_probs=32.7
Q ss_pred eEEEEeCCCCchHHHHHHHHHhCCeE-EEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 299 PVELSGKGRPLVFHDITLALKMLDIC-IFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 299 ~~~v~~~DRpgll~dvt~~L~~~~~~-V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
.+.+...| +......|++.|+. +...-.. ..|-.. |++.|++|+.+.
T Consensus 69 ~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~------~~~G~~-~~~~DPdGn~ie 116 (128)
T 3g12_A 69 QLGFQITD----LEKTVQELVKIPGAMCILDPTD------MPDGKK-AIVLDPDGHSIE 116 (128)
T ss_dssp EEEEEESC----HHHHHHHHTTSTTCEEEEEEEE------CC-CEE-EEEECTTCCEEE
T ss_pred EEEEEeCC----HHHHHHHHHHCCCceeccCcee------CCCccE-EEEECCCCCEEE
Confidence 35566667 78888899999999 6543222 123334 999999999775
No 88
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=25.43 E-value=1.8e+02 Score=21.65 Aligned_cols=41 Identities=10% Similarity=-0.019 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 355 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~ 355 (372)
+......|++.|+.+...-..++..+ -...+|+.|++|+.+
T Consensus 88 i~~~~~~l~~~G~~~~~~p~~~~~~~----g~~~~~~~dPdG~~i 128 (133)
T 3hdp_A 88 IQKSIEEMSQIGYTLFKKAEIAPAID----NRKVAFLFSTDIGLI 128 (133)
T ss_dssp HHHHHHHHTTTTEEEEEEEEEEGGGT----TEEEEEEEETTTEEE
T ss_pred HHHHHHHHHHcCCccccCCeecccCC----CceEEEEECCCceEE
Confidence 66778889999999866533232221 235778889999865
No 89
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=24.97 E-value=89 Score=23.36 Aligned_cols=43 Identities=12% Similarity=0.186 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
+..+..-|++.|+.+...-..+... .. ....||+.|++|+.+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~-~g--~~~~~~~~DPdG~~ie 126 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGA-QG--AITSFYFRDPDGNLIE 126 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEET-TE--EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCC-CC--CeEEEEEECCCCCEEE
Confidence 7778888999999986655443221 11 3478899999998764
No 90
>2kwz_A Protease NS2-3; NS2 domain, viral protein, membrane prote; NMR {Hepatitis c virus}
Probab=23.67 E-value=28 Score=22.27 Aligned_cols=14 Identities=29% Similarity=0.218 Sum_probs=12.0
Q ss_pred CCCchHHHHHHHHH
Q 017424 306 GRPLVFHDITLALK 319 (372)
Q Consensus 306 DRpgll~dvt~~L~ 319 (372)
=.|+|+||||..|-
T Consensus 12 ~hP~L~FdITK~Ll 25 (40)
T 2kwz_A 12 IHPELIFTITKILL 25 (40)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred hCchHHHHHHHHHH
Confidence 47999999999884
No 91
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=23.61 E-value=2.6e+02 Score=21.69 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=31.3
Q ss_pred ceEEEEEEeCCCCcHHHHHHHHHHhC---CceEEEEEEEeeCCCe
Q 017424 69 DVFLLKLSCYDRKGLLYDVTAVLCEL---ELTIEKVKISTTPDGK 110 (372)
Q Consensus 69 ~~~~i~v~~~DrpGLL~~I~~~L~~~---glnI~~A~I~T~~~~~ 110 (372)
-.+.+.|.+.+.+++...|..++..+ +..+ ..+- +.+|+
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~--Ss~Gk 76 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKP--SSKGN 76 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEE--SSCSS
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecC--CCCCe
Confidence 46899999999999999999999988 7777 3354 34454
No 92
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=23.00 E-value=96 Score=24.16 Aligned_cols=40 Identities=8% Similarity=0.190 Sum_probs=27.7
Q ss_pred hHHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCC
Q 017424 310 VFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 355 (372)
Q Consensus 310 ll~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~ 355 (372)
=+......|++.|+.+. ..... ..+ ....||+.|++|+.+
T Consensus 97 dld~~~~~l~~~G~~~~-~~~~~-~~~----~~~~~~~~DPdG~~i 136 (141)
T 3ghj_A 97 EIEPLKKALESKGVSVH-GPVNQ-EWM----QAVSLYFADPNGHAL 136 (141)
T ss_dssp GHHHHHHHHHHTTCCCE-EEEEE-GGG----TEEEEEEECTTCCEE
T ss_pred HHHHHHHHHHHCCCeEe-CCccc-CCC----CceEEEEECCCCCEE
Confidence 36778888999999986 22221 111 246788999999875
No 93
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=22.83 E-value=1e+02 Score=24.11 Aligned_cols=42 Identities=14% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 355 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~ 355 (372)
+......|++.|+.+......+... ......||+.|++|+.+
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~~~~---~g~~~~~~~~DPdGn~i 142 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPRTGA---KGPIMSIYFRDPDRNLI 142 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEET---TEEEEEEEEECTTCCEE
T ss_pred HHHHHHHHHHcCCceeeCcccccCC---CCceEEEEEECCCCCEE
No 94
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=22.27 E-value=1.2e+02 Score=23.30 Aligned_cols=40 Identities=8% Similarity=0.067 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
+..+...|++.|+.+...-... .|-...||+.|++|+.+.
T Consensus 89 v~~~~~~l~~~G~~~~~~~~~~------~~g~~~~~~~DPdG~~ie 128 (141)
T 2rbb_A 89 VDKLVPVAIAAGATLIKAPYET------YYHWYQAVLLDPERNVFR 128 (141)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC------TTSEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCeEecCcccc------CCccEEEEEECCCCCEEE
Confidence 5566778899999875443221 233578889999999764
No 95
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=21.92 E-value=56 Score=26.54 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=25.2
Q ss_pred EEEEEEeC---CCCcHHHHHHHHHHhCCceEEEE
Q 017424 71 FLLKLSCY---DRKGLLYDVTAVLCELELTIEKV 101 (372)
Q Consensus 71 ~~i~v~~~---DrpGLL~~I~~~L~~~glnI~~A 101 (372)
-.|+|.++ |-.|+++.+++.|++.|+.|.-.
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~i 96 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVV 96 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEE
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEE
Confidence 35666554 88899999999999999998743
No 96
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=21.74 E-value=2.7e+02 Score=21.69 Aligned_cols=46 Identities=15% Similarity=0.076 Sum_probs=32.9
Q ss_pred EEEEEEeCCCCcHHHHHHHHHHhCCceEEEEEEEeeCCCeEEEEEEEEcCCCCC
Q 017424 71 FLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELL 124 (372)
Q Consensus 71 ~~i~v~~~DrpGLL~~I~~~L~~~glnI~~A~I~T~~~~~~~DvF~V~~~~g~~ 124 (372)
..+.+...| +.++...|.+.|+.+...-. ....|+ .|++.|++|..
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~-~~~~G~---~~~~~DPdG~~ 112 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPS-KVPTGR---NMTVRHSDGSV 112 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEE-EETTEE---EEEEECTTSCE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCc-cCCCce---EEEEECCCCCE
Confidence 344455555 67788889999999987655 334555 48999999974
No 97
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=21.06 E-value=1e+02 Score=22.82 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 355 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~ 355 (372)
+..+...|++.|+.+...-.. + .|-.+.||+.|++|+.+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~-~-----~~g~~~~~~~DPdG~~i 123 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRM-T-----GDGYYESVVLDPEGNRI 123 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE-C-----TTSCEEEEEECTTSCEE
T ss_pred HHHHHHHHHHcCCeEecCccc-C-----CCCcEEEEEECCCCCEE
Confidence 456777889999998654321 1 12346688999999865
No 98
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=20.78 E-value=1.4e+02 Score=22.98 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=28.2
Q ss_pred hHHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 310 VFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 310 ll~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
=+......|++.|+.+...-..+ .|- ..||+.|++|+.+.
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~------~~g-~~~~~~DPdG~~ie 147 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTR------PTG-RGVYFYDPDGFMIE 147 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC-------CC-EEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHCCCccccCceec------CCc-cEEEEECCCCCEEE
Confidence 36777888999999986554432 111 47789999999764
No 99
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=20.15 E-value=1.1e+02 Score=23.82 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCeEEEEEEEeeeccCceeeeEEEEEEeCCCCCCCC
Q 017424 311 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 356 (372)
Q Consensus 311 l~dvt~~L~~~~~~V~~a~i~~~~~~~~~~~~~~f~~~~~~g~~~~ 356 (372)
+..+...|++.|+.+...-..+... .. ....||+.|++|+.+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~-~g--~~~~~~~~DPdG~~iE 139 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGA-TG--EIMSIYIRDPDGNLIE 139 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEET-TE--EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCeEecCCccccCC-CC--cEEEEEEECCCCCEEE
Confidence 6777888999999986654433211 11 2467889999999765
Done!