Query 017425
Match_columns 372
No_of_seqs 243 out of 1178
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 14:13:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-33 5.9E-38 249.6 15.0 124 244-369 2-138 (165)
2 3ceg_A Baculoviral IAP repeat- 100.0 6.1E-34 2.1E-38 278.4 12.9 154 216-369 38-215 (323)
3 3h8k_A Ubiquitin-conjugating e 100.0 2.5E-33 8.5E-38 248.1 15.6 122 246-369 3-137 (164)
4 2ayv_A Ubiquitin-conjugating e 100.0 1.9E-33 6.5E-38 251.0 14.5 119 242-369 17-141 (166)
5 3rz3_A Ubiquitin-conjugating e 100.0 4.7E-33 1.6E-37 251.4 14.6 126 242-369 3-141 (183)
6 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.8E-33 1.3E-37 249.6 13.8 116 245-369 3-124 (169)
7 4gpr_A Ubiquitin-conjugating e 100.0 7.1E-33 2.4E-37 242.7 14.9 117 244-369 2-124 (151)
8 1zdn_A Ubiquitin-conjugating e 100.0 4.9E-33 1.7E-37 245.6 13.2 119 242-369 9-133 (158)
9 1yh2_A HSPC150 protein similar 100.0 1.1E-32 3.6E-37 246.1 15.4 120 245-369 3-128 (169)
10 2c4o_A Ubiquitin-conjugating e 100.0 9.4E-33 3.2E-37 246.1 14.9 119 242-369 15-139 (165)
11 2awf_A Ubiquitin-conjugating e 100.0 7.8E-33 2.7E-37 248.0 14.1 124 244-369 15-151 (172)
12 2e2c_A Ubiquitin conjugating e 100.0 9.2E-33 3.1E-37 243.2 13.9 118 243-369 6-129 (156)
13 2h2y_A Ubiquitin-conjugating e 100.0 9.3E-33 3.2E-37 239.0 13.5 105 246-360 20-125 (136)
14 2aak_A UBC1, ubiquitin conjuga 100.0 1E-32 3.5E-37 241.7 13.9 116 245-369 3-124 (152)
15 1z2u_A Ubiquitin-conjugating e 100.0 1.1E-32 3.7E-37 241.0 13.8 115 246-369 4-124 (150)
16 2c2v_B Ubiquitin-conjugating e 100.0 4.5E-33 1.5E-37 245.0 11.0 115 246-369 5-125 (154)
17 1yrv_A Ubiquitin-conjugating l 100.0 5.8E-33 2E-37 248.6 11.5 130 233-369 10-146 (169)
18 2r0j_A Ubiquitin carrier prote 100.0 2E-32 6.7E-37 239.4 13.6 113 248-369 3-121 (149)
19 1jat_A Ubiquitin-conjugating e 100.0 9.5E-33 3.3E-37 242.8 11.7 115 246-369 5-125 (155)
20 2fo3_A Ubiquitin-conjugating e 100.0 1.4E-32 4.7E-37 234.3 10.9 99 245-352 5-104 (125)
21 2pwq_A Ubiquitin conjugating e 100.0 1.7E-32 5.9E-37 254.7 11.9 119 242-369 19-144 (216)
22 1i7k_A Ubiquitin-conjugating e 100.0 3E-32 1E-36 246.3 13.0 118 243-369 27-150 (179)
23 2a7l_A Hypothetical ubiquitin- 100.0 7.7E-33 2.6E-37 240.3 8.5 105 247-361 23-131 (136)
24 1fxt_A Ubiquitin-conjugating e 100.0 2.1E-32 7.1E-37 239.0 10.8 114 247-369 2-123 (149)
25 3fn1_B NEDD8-conjugating enzym 100.0 6.3E-32 2.1E-36 240.0 13.7 124 242-369 10-141 (167)
26 2bep_A Ubiquitin-conjugating e 100.0 1.1E-31 3.8E-36 237.0 14.5 118 243-369 5-132 (159)
27 3bzh_A Ubiquitin-conjugating e 100.0 1.1E-31 3.7E-36 245.4 14.8 116 245-369 47-168 (194)
28 3rcz_B SUMO-conjugating enzyme 100.0 6.9E-32 2.4E-36 240.3 13.1 119 244-369 8-137 (163)
29 2gjd_A Ubiquitin-conjugating e 100.0 9.5E-32 3.2E-36 237.2 12.5 118 245-369 3-131 (157)
30 2grr_A Ubiquitin-conjugating e 100.0 2E-31 6.9E-36 235.9 13.2 120 243-369 4-134 (161)
31 3k9o_A Ubiquitin-conjugating e 100.0 2.4E-31 8.3E-36 242.9 12.8 116 245-369 4-129 (201)
32 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.9E-31 9.8E-36 242.6 13.1 116 245-369 31-166 (193)
33 1wzv_A Ubiquitin-conjugating e 100.0 4.3E-31 1.5E-35 232.0 12.4 114 247-369 5-125 (155)
34 2a4d_A Ubiquitin-conjugating e 100.0 8.4E-31 2.9E-35 233.4 12.6 120 243-369 22-153 (160)
35 2y9m_A Ubiquitin-conjugating e 100.0 1.9E-30 6.6E-35 232.3 14.5 119 243-369 3-141 (172)
36 1y8x_A Ubiquitin-conjugating e 100.0 1.4E-30 4.9E-35 230.7 12.7 113 245-369 5-124 (160)
37 3e46_A Ubiquitin-conjugating e 100.0 3.1E-30 1.1E-34 244.7 14.5 119 242-369 53-181 (253)
38 2q0v_A Ubiquitin-conjugating e 100.0 2.5E-30 8.4E-35 229.1 12.4 118 242-369 17-147 (156)
39 2hlw_A Ubiquitin-conjugating e 100.0 1.9E-30 6.4E-35 232.9 11.7 141 222-369 11-163 (170)
40 1tte_A Ubiquitin-conjugating e 100.0 4E-31 1.4E-35 245.3 7.3 114 247-369 3-124 (215)
41 2nvu_C NEDD8-conjugating enzym 100.0 2.5E-30 8.6E-35 233.7 11.9 116 242-369 22-144 (180)
42 4ds2_A Ubiquitin-conjugating e 100.0 1.7E-30 6E-35 231.2 8.5 118 243-369 5-145 (167)
43 1c4z_D UBCH7, ubiquitin conjug 100.0 1.8E-30 6.1E-35 227.9 8.4 114 247-369 3-123 (154)
44 2z5d_A Ubiquitin-conjugating e 100.0 1.8E-30 6.3E-35 235.0 8.4 111 246-369 25-143 (179)
45 2onu_A Ubiquitin-conjugating e 100.0 1.7E-30 5.9E-35 228.5 6.2 111 247-369 3-121 (152)
46 1jat_B Ubiquitin-conjugating e 100.0 5.6E-30 1.9E-34 221.6 9.1 114 246-369 6-132 (138)
47 4ddg_A Ubiquitin-conjugating e 100.0 3.1E-29 1.1E-33 249.9 14.2 116 245-369 2-123 (399)
48 3o2u_A NEDD8-conjugating enzym 100.0 3.5E-29 1.2E-33 227.9 11.7 116 242-369 25-153 (190)
49 1yf9_A Ubiquitin carrier prote 100.0 8.4E-29 2.9E-33 222.1 8.1 111 246-369 12-130 (171)
50 2f4w_A Ubiquitin-conjugating e 100.0 4.2E-28 1.4E-32 220.3 12.4 114 243-364 11-130 (187)
51 1zuo_A Hypothetical protein LO 99.9 1.3E-28 4.3E-33 223.7 7.0 103 242-352 23-141 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.6E-23 8.9E-28 187.1 0.7 102 244-358 30-143 (172)
53 3kpa_A Probable ubiquitin fold 99.6 2.6E-16 8.7E-21 139.9 2.2 92 244-352 32-133 (168)
54 3r3q_A Suppressor protein STP2 99.5 5.3E-14 1.8E-18 125.9 8.8 110 248-365 30-161 (162)
55 3obq_A Tumor susceptibility ge 99.0 4.2E-10 1.4E-14 99.2 7.6 82 251-337 25-116 (146)
56 2ebm_A RWD domain-containing p 95.3 0.11 3.7E-06 43.0 9.5 69 247-317 11-79 (128)
57 2day_A Ring finger protein 25; 94.7 0.21 7.3E-06 41.2 9.8 69 249-317 11-83 (128)
58 2yz0_A Serine/threonine-protei 93.9 0.41 1.4E-05 40.0 9.9 71 246-317 10-86 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 91.8 0.99 3.4E-05 37.4 9.3 70 246-316 10-86 (137)
60 2daw_A RWD domain containing p 90.0 1.2 4E-05 38.5 8.4 71 243-317 11-99 (154)
61 2ebk_A RWD domain-containing p 88.3 0.68 2.3E-05 38.2 5.4 68 249-317 10-80 (128)
62 2dax_A Protein C21ORF6; RWD do 83.9 2.7 9.2E-05 35.8 7.0 69 246-317 8-97 (152)
63 3zqs_A E3 ubiquitin-protein li 49.2 39 0.0013 30.6 6.8 59 249-317 4-62 (186)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-33 Score=249.59 Aligned_cols=124 Identities=27% Similarity=0.516 Sum_probs=110.3
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecC-CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccc
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCE-ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLN 322 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~E-ddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfH 322 (372)
++.+.+||++|++.|+++++.||++.+.+ +|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ +||
T Consensus 2 ~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 79 (165)
T 2ucz_A 2 SKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPS--ILH 79 (165)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CSC
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCC--Ccc
Confidence 35789999999999999999999999865 799999999999999999999999999999999999999999999 999
Q ss_pred cCcCCCCcEEecCCCCcCCC------CCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 323 PNLYDCGKVCLSLLGTWTGK------STEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG~------~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|||+.+|+|||++|++|+.. ..+.|+|+++. |..+|.+|++++|+|.
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~ 138 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANI 138 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhH
Confidence 99999999999999775422 36899999762 3455668999999874
No 2
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=278.38 Aligned_cols=154 Identities=36% Similarity=0.670 Sum_probs=128.4
Q ss_pred cccCccccccCCCC--------CcccccCCcCCCCCchHHHHHHHHHHHHHHhcCCC----ceEEEecCCCcceEEEEEE
Q 017425 216 QGFKQFDTVDDFSD--------HHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPD----TIFVRVCEARMELLRAVMI 283 (372)
Q Consensus 216 ~~FkqFd~v~~~sd--------Hhf~~~~~~~~~~s~s~a~KRL~kElk~L~k~~P~----gIsV~p~Eddi~~W~vvI~ 283 (372)
.+|++|+++.+.+| |||..........++..+.+||++|++.|++++|+ ++++.+.++|++.|+++|.
T Consensus 38 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~ 117 (323)
T 3ceg_A 38 LQFDTFEMVSEDEDGKLGFKVNYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLIT 117 (323)
T ss_dssp TSEEEECCEEECTTSCEEESSCCTTHHHHHTCCCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEE
T ss_pred hcCceeeecccccccccccccchHHHhhhhccCCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEe
Confidence 57999999987765 66644322212256778999999999999999887 4678889999999999999
Q ss_pred CCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCC---CccccCcCCCCcEEecCCCCcCCCCCCCccchhHHHH-----
Q 017425 284 GPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG---LRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTML----- 355 (372)
Q Consensus 284 GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~---~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~StIL----- 355 (372)
||++|||+||+|+|+|.||++||++||+|+|.|++ .|||||||.+|+|||++|++|.|...+.|+|++++|.
T Consensus 118 GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLls 197 (323)
T 3ceg_A 118 GPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVS 197 (323)
T ss_dssp BCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHH
T ss_pred CCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHH
Confidence 99999999999999999999999999999999973 3899999999999999999999988899999984332
Q ss_pred -Hhhh---CCCCCCCCCc
Q 017425 356 -QGRR---CPEVTMTMHL 369 (372)
Q Consensus 356 -QVLl---sP~~D~~i~~ 369 (372)
|.|+ .|++++|++.
T Consensus 198 IqsLL~~~~Pn~~dP~~~ 215 (323)
T 3ceg_A 198 VQSLILVAEPYFNEPGYE 215 (323)
T ss_dssp HHHHTSCSSGGGGSTTGG
T ss_pred HHHHHcCCCCCCCCccCH
Confidence 2233 4666888764
No 3
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.5e-33 Score=248.06 Aligned_cols=122 Identities=26% Similarity=0.443 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Ed-di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
.+.+||++|++.|+++++.||++.+.++ |++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +||||
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPN 80 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCE--MFHPN 80 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCC--CccCC
Confidence 5899999999999999999999998765 99999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCC------CCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGK------STEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~------~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|++|.++ ..+.|+|+++. |..+|.+|++++|+|.
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~ 137 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANV 137 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCH
Confidence 999999999999987532 35899999762 4556668999999874
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-33 Score=250.96 Aligned_cols=119 Identities=24% Similarity=0.447 Sum_probs=108.7
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
...+.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~ 94 (166)
T 2ayv_A 17 LYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTK--IY 94 (166)
T ss_dssp --CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CC
T ss_pred ccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccC--Cc
Confidence 3455689999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 95 HPNI~~~G~ICL~iL~-------~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~ 141 (166)
T 2ayv_A 95 HPNINSQGAICLDILK-------DQWSPALTISKVLLSISSLLTDPNPDDPLVP 141 (166)
T ss_dssp BTTBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CCcCCCCCeEEccccc-------ccCCCCCcHHHHHHHHHHHHhCCCCCchhhH
Confidence 9999999999999997 799999752 4556678999999874
No 5
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.7e-33 Score=251.42 Aligned_cols=126 Identities=25% Similarity=0.445 Sum_probs=107.7
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLR 320 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~-p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~I 320 (372)
++.+.+.|||++|++.|+++++.||++. +.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i 80 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTK--M 80 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--C
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCC--C
Confidence 3455789999999999999999999999 778899999999999999999999999999999999999999999999 9
Q ss_pred cccCcCCCCcEEecCCCCc-----CCC-CCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 321 LNPNLYDCGKVCLSLLGTW-----TGK-STEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 321 fHPNVy~~GkVCLSLL~TW-----sG~-~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||.+|+|||++|++| +|. ..++|+|++++ |+.+|..|++++|+|.
T Consensus 81 ~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~ 141 (183)
T 3rz3_A 81 WHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANV 141 (183)
T ss_dssp CCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSH
T ss_pred ccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 9999999999999999874 332 34899999762 4556668999999874
No 6
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-33 Score=249.64 Aligned_cols=116 Identities=25% Similarity=0.532 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
+.+.+||++|++.|++.++.||.+.+.++|+++|+++|.||++|||+||+|+|+|.||.+||++||+|+|.|+ |||||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~--i~HPN 80 (169)
T 1ayz_A 3 TPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSE--MFHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccC--CccCC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|+ +.|+|++++ |..+|..|++++|+|.
T Consensus 81 I~~~G~ICl~iL~-------~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~ 124 (169)
T 1ayz_A 81 VYANGEICLDILQ-------NRWTPTYDVASILTSIQSLFNDPNPASPANV 124 (169)
T ss_dssp BCTTSBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSH
T ss_pred CCCCCeEeehhhc-------cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHH
Confidence 9999999999997 789999752 4455668999999874
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=7.1e-33 Score=242.72 Aligned_cols=117 Identities=23% Similarity=0.456 Sum_probs=108.9
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcccc
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNP 323 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHP 323 (372)
+..+.+||++|++.|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +|||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HP 79 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTK--VYHP 79 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecC--cccc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 324 NLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 324 NVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 80 nv~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 124 (151)
T 4gpr_A 80 NINKNGVICLDILK-------DQWSPALTLSRVLLSISSLLTDPNPSDPLDP 124 (151)
T ss_dssp TBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSH
T ss_pred eECCCCEEEccccc-------CCCCCCCcHHHHHHHHHHHhcCCCCCCchhH
Confidence 99999999999997 799999752 4556779999999874
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-33 Score=245.63 Aligned_cols=119 Identities=24% Similarity=0.462 Sum_probs=110.4
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
.++..+.+||++|++.|+++++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ +|
T Consensus 9 ~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~ 86 (158)
T 1zdn_A 9 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK--IF 86 (158)
T ss_dssp CSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CC
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC--cc
Confidence 5677899999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+.+|+|||++|+ +.|+|+++. |..+|..|++++|+|.
T Consensus 87 HPnv~~~G~iCl~iL~-------~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~ 133 (158)
T 1zdn_A 87 HPNVGANGEICVNVLK-------RDWTAELGIRHVLLTIKCLLIHPNPESALNE 133 (158)
T ss_dssp CTTBCTTSBBCHHHHT-------TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSH
T ss_pred cCCCCCCCEEehhhcC-------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 9999999999999997 789999752 4556678999999874
No 9
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-32 Score=246.14 Aligned_cols=120 Identities=25% Similarity=0.485 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
..+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +||||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPN 80 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTP--IYHPN 80 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecC--Ccccc
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|++|. .+.|+|+++. |..+|..|++++|+|.
T Consensus 81 v~~~G~iCl~iL~~~~---~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~ 128 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPP---KGAWRPSLNIATVLTSIQLLMSEPNPDDPLMA 128 (169)
T ss_dssp BCTTCBBCCGGGSCTT---TSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CCcCCeEecccccCCc---ccCCCCCCcHHHHHHHHHHHHhCCCCcchHhH
Confidence 9999999999998763 3689999752 3455668999999874
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=9.4e-33 Score=246.05 Aligned_cols=119 Identities=24% Similarity=0.439 Sum_probs=109.4
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
...+.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~--i~ 92 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IY 92 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CC
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecC--Cc
Confidence 4566799999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 93 HPnV~~~G~ICl~iL~-------~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~ 139 (165)
T 2c4o_A 93 HPNINSNGSICLDILR-------SQWSPALTISKVLLSICSLLCDPNPDDPLVP 139 (165)
T ss_dssp BTTBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSH
T ss_pred CCcCCCCCeEeehhhc-------CCCCCcCcHHHHHHHHHHHHhCCCCCccccH
Confidence 9999999999999997 799999752 4455668999999874
No 11
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=7.8e-33 Score=248.02 Aligned_cols=124 Identities=22% Similarity=0.370 Sum_probs=102.3
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecC-CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccc
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCE-ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLN 322 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~E-ddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfH 322 (372)
.+.+.+||++|+++|+++++.||++.+.+ +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~--i~H 92 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITE--IWH 92 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCC
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCC--Ccc
Confidence 34589999999999999999999999865 799999999999999999999999999999999999999999999 999
Q ss_pred cCcCCCCcEEecCCCCcCC------CCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 323 PNLYDCGKVCLSLLGTWTG------KSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG------~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|||+.+|+|||++|++|.. ...+.|+|++++ |+.+|.+|++++|+|.
T Consensus 93 PNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~ 151 (172)
T 2awf_A 93 PNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANV 151 (172)
T ss_dssp TTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC--------
T ss_pred CCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCH
Confidence 9999999999999987532 235799999752 3445668999999875
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-33 Score=243.17 Aligned_cols=118 Identities=22% Similarity=0.347 Sum_probs=108.2
Q ss_pred CchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccc
Q 017425 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLN 322 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfH 322 (372)
++..+.+||++|++.|+++++.||++.+.+++++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 83 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP--CWH 83 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCB
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC--ccc
Confidence 345689999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 323 PNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 84 Pnv~~~G~iCl~iL~-------~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~ 129 (156)
T 2e2c_A 84 PNVDQSGNICLDILK-------ENWTASYDVRTILLSLQSLLGEPNNASPLNA 129 (156)
T ss_dssp TTBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCH
T ss_pred CCCccCceEECcccc-------ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHH
Confidence 999999999999997 789999752 3445568999999874
No 13
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.3e-33 Score=238.95 Aligned_cols=105 Identities=27% Similarity=0.474 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCc-cccC
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLR-LNPN 324 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~I-fHPN 324 (372)
.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ + ||||
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~~HPn 97 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQK--PPKHTH 97 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS--CCCCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCC--CCCCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999998 6 9999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHHHHHhhhC
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQGRRC 360 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~StILQVLls 360 (372)
|+.+|+|||++|+ +.|+|+++ |.+||++
T Consensus 98 v~~~G~ICl~iL~-------~~WsP~~t-i~~vL~s 125 (136)
T 2h2y_A 98 VYSNGDICLSVLG-------DDYNPSLS-ISGLILS 125 (136)
T ss_dssp BCTTCCBCCGGGT-------TTCCTTCC-HHHHHHH
T ss_pred CCCCCEEECcccc-------CCCCCCCc-HHHHHHH
Confidence 9999999999997 79999985 5544443
No 14
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1e-32 Score=241.66 Aligned_cols=116 Identities=27% Similarity=0.512 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
+.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 3 ~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPn 80 (152)
T 2aak_A 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSR--MFHPN 80 (152)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecC--cccCC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|. +.|+|+++. |..+|..|++++|+|.
T Consensus 81 v~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 124 (152)
T 2aak_A 81 IYADGSICLDILQ-------NQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124 (152)
T ss_dssp BCTTSBBCCGGGT-------TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSH
T ss_pred CCCCCEEechhhc-------CCCCCCCcHHHHHHHHHHHHhCCCCCccccH
Confidence 9999999999997 789999752 3455668999999874
No 15
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.1e-32 Score=241.04 Aligned_cols=115 Identities=24% Similarity=0.459 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv 81 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IYHPNI 81 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecC--cccCcC
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 82 ~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~ 124 (150)
T 1z2u_A 82 NSNGSICLDILR-------SQWSPALTISKVLLSICSLLCDPNPDDPLVP 124 (150)
T ss_dssp CTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CCCCeEeecccc-------CCCCCCCCHHHHHHHHHHHhhCCCCCCccCH
Confidence 999999999997 799999752 4455668999999874
No 16
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-33 Score=244.96 Aligned_cols=115 Identities=21% Similarity=0.424 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
.+.+||++|++.|+++++.||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv 82 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTK--IYHPNV 82 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCCTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecC--cccCcC
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 83 ~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~ 125 (154)
T 2c2v_B 83 DKLGRICLDILK-------DKWSPALQIRTVLLSIQALLSAPNPDDPLAN 125 (154)
T ss_dssp CTTCBBCCHHHH-------TSCCTTCCHHHHHHHHHHHTTSCCCCCC--C
T ss_pred ccCCeEEchhcc-------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 999999999997 789999752 3455668999999874
No 17
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=5.8e-33 Score=248.65 Aligned_cols=130 Identities=17% Similarity=0.278 Sum_probs=111.7
Q ss_pred cccCCcCCCCCchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeE
Q 017425 233 NRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSV 312 (372)
Q Consensus 233 ~~~~~~~~~~s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV 312 (372)
..+++.....|+..+.+||++|++.|+++++.||.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|
T Consensus 10 ~~~~~~~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 89 (169)
T 1yrv_A 10 HSSGLVPRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVV 89 (169)
T ss_dssp -----CCTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEE
T ss_pred ccccccccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcc
Confidence 33444444356667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCccccCc-CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 313 YYYSGGLRLNPNL-YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 313 ~F~T~~~IfHPNV-y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+|.|+ |||||| +.+|+|||++|+. .+.|+|+++. |..+|.+|++++|+|.
T Consensus 90 ~F~T~--i~HPNI~~~~G~ICL~iL~~-----~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~ 146 (169)
T 1yrv_A 90 KFITI--PFHPNVDPHTGQPCIDFLDN-----PEKWNTNYTLSSILLALQVMLSNPVLENPVNL 146 (169)
T ss_dssp EESSC--CCCTTBCTTTCCBCCHHHHC-----GGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCH
T ss_pred eecCC--CccCcccCCCCeEeehhhcC-----CcCCCCcCCHHHHHHHHHHHHhCCCCCCchhH
Confidence 99999 999999 8999999999962 2689999752 3455668999999874
No 18
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.98 E-value=2e-32 Score=239.44 Aligned_cols=113 Identities=25% Similarity=0.533 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCcCC
Q 017425 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLYD 327 (372)
Q Consensus 248 ~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNVy~ 327 (372)
.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||||+.
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv~~ 80 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTK--IYHPNIDK 80 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSC--CCBTTBCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccC--CccCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 328 CGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 328 ~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 81 ~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 121 (149)
T 2r0j_A 81 LGRICLDILK-------DKWSPALQIRTVLLSIQALLSSPEPDDPLDS 121 (149)
T ss_dssp TCBBCCGGGT-------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSC
T ss_pred CCEEechhcC-------CCCCCCCcHHHHHHHHHHHHhCCCCCCchhH
Confidence 9999999997 799999752 4456678999999874
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.98 E-value=9.5e-33 Score=242.85 Aligned_cols=115 Identities=23% Similarity=0.456 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
.+.+||++|++.|+++++.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv 82 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTK--IYHPNI 82 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSC--CCBTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecc--cccCCC
Confidence 356999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+.+|+|||++|. +.|+|+++. |..+|.+|++++|+|.
T Consensus 83 ~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 125 (155)
T 1jat_A 83 DRLGRICLDVLK-------TNWSPALQIRTVLLSIQALLASPNPNDPLAN 125 (155)
T ss_dssp CTTCCBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCC
T ss_pred CCCCEEEchhhc-------cCCCCCCCHHHHHHHHHHHHhCCCCCCcccH
Confidence 999999999997 789999752 4456678999999885
No 20
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.98 E-value=1.4e-32 Score=234.35 Aligned_cols=99 Identities=28% Similarity=0.522 Sum_probs=92.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCc-ccc
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLR-LNP 323 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~I-fHP 323 (372)
+.+.+||++|++.|+++++.||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ + |||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~~HP 82 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQK--PPKHT 82 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS--CCCBT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCC--CCCCC
Confidence 3478999999999999999999999999999999999999999999999999999999999999999999998 6 999
Q ss_pred CcCCCCcEEecCCCCcCCCCCCCccchhH
Q 017425 324 NLYDCGKVCLSLLGTWTGKSTEMWDKNKS 352 (372)
Q Consensus 324 NVy~~GkVCLSLL~TWsG~~~E~WsPa~S 352 (372)
||+.+|+|||++|+ +.|+|+++
T Consensus 83 nv~~~G~iCl~iL~-------~~W~P~~~ 104 (125)
T 2fo3_A 83 HVYSNGDICLSLLG-------DDYNPSLS 104 (125)
T ss_dssp TBCTTSBBCCGGGT-------TTCCTTCC
T ss_pred cCCCCCEEEchhcC-------CCCCCCCc
Confidence 99999999999997 79999975
No 21
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.97 E-value=1.7e-32 Score=254.66 Aligned_cols=119 Identities=22% Similarity=0.400 Sum_probs=109.4
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
...+.+.+||++|++.|+++++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~--i~ 96 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK--IW 96 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CC
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC--Cc
Confidence 4566789999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+ .+|+|||++|+ +.|+|++++ |..+|.+|++++|+|.
T Consensus 97 HPNI~~~~G~ICL~iL~-------~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~ 144 (216)
T 2pwq_A 97 HPNISSQTGAICLDVLK-------NEWSPALTIRTALLSIQALLSDPQPDDPQDA 144 (216)
T ss_dssp BTTBCTTTCBBCCHHHH-------HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CCCCcCCCCEEEchhhc-------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 99999 69999999997 689999752 4456678999999873
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=3e-32 Score=246.32 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=107.3
Q ss_pred CchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccc
Q 017425 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLN 322 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfH 322 (372)
++..+.+||++|++.|+++++.||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ +||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~H 104 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTP--CYH 104 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSC--CCS
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecC--Ccc
Confidence 355689999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 323 PNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|||+.+|+|||++|+ +.|+|+++. |..+|..|++++|+|.
T Consensus 105 PNV~~~G~ICL~iL~-------~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~ 150 (179)
T 1i7k_A 105 PNVDTQGNISLDILK-------EKWSALYDVRTILLSIQSLLGEPNIDSPLNT 150 (179)
T ss_dssp TTBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CccccCCeEEcccCc-------CcCCCCCCHHHHHHHHHHHHhCCCCcchhhH
Confidence 999999999999997 789999752 3456668999999874
No 23
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=7.7e-33 Score=240.26 Aligned_cols=105 Identities=25% Similarity=0.443 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHhcCCCceEEE--ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc--c
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVR--VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL--N 322 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~--p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If--H 322 (372)
+.+||++|++.|++++++||++. +.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +| |
T Consensus 23 ~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~--i~~~H 100 (136)
T 2a7l_A 23 MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE--NIPVH 100 (136)
T ss_dssp SCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS--CCCCB
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC--CcCCC
Confidence 34999999999999999999975 788999999999999999999999999999999999999999999999 77 9
Q ss_pred cCcCCCCcEEecCCCCcCCCCCCCccchhHHHHHhhhCC
Q 017425 323 PNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQGRRCP 361 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG~~~E~WsPa~StILQVLlsP 361 (372)
|||+.+|+|||++|+ ++|+|+++ |.+||+++
T Consensus 101 PNV~~~G~ICL~iL~-------~~WsP~~t-i~~vL~sI 131 (136)
T 2a7l_A 101 PHVYSNGHICLSILT-------EDWSPALS-VQSVCLSI 131 (136)
T ss_dssp TTBCTTCBBCCGGGT-------TTCCTTSC-HHHHHHHH
T ss_pred ccCCCCCeEEchhcC-------CCCCCCCc-HHHHHHHH
Confidence 999999999999997 79999985 77777654
No 24
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.97 E-value=2.1e-32 Score=239.01 Aligned_cols=114 Identities=26% Similarity=0.525 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~p~Ed-di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
+.+||++|++.|+++++.||++.+.++ |++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPni 79 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK--VYHPNI 79 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC--CccCCC
Confidence 479999999999999999999999887 99999999999999999999999999999999999999999999 999999
Q ss_pred CC-CCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YD-CGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~-~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+. +|+|||++|+ ++|+|+++. |..+|.+|++++|+|.
T Consensus 80 ~~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 123 (149)
T 1fxt_A 80 SSVTGAICLDILK-------NAWSPVITLKSALISLQALLQSPEPNDPQDA 123 (149)
T ss_dssp CSSSCCBCCHHHH-------TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSH
T ss_pred cCCCCeEeCCcCC-------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 97 9999999997 789999752 4456678999999874
No 25
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.97 E-value=6.3e-32 Score=239.96 Aligned_cols=124 Identities=23% Similarity=0.346 Sum_probs=109.2
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEEe-cCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRV-CEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLR 320 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~p-~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~I 320 (372)
...+.+.+||++|++.|++++|.||++.+ .+++++.|.++| ||++|||+||+|+|+|.||++||++||+|+|.|+ |
T Consensus 10 ~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i 86 (167)
T 3fn1_B 10 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK--I 86 (167)
T ss_dssp CCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC--C
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC--c
Confidence 45567999999999999999999999985 467899999988 9999999999999999999999999999999999 9
Q ss_pred cccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhC-CCCCCCCCc
Q 017425 321 LNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRC-PEVTMTMHL 369 (372)
Q Consensus 321 fHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLls-P~~D~~i~~ 369 (372)
|||||+.+|+|||++|++| |...++|+|+++. |..+|.+ |++++|+|.
T Consensus 87 ~HPnv~~~G~iCl~iL~~~-~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~ 141 (167)
T 3fn1_B 87 WHPNITETGEICLSLLREH-SIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNI 141 (167)
T ss_dssp CCSSBCTTCCBCCGGGSBC-SSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCH
T ss_pred ccCCCCCCCEEechhhccC-CCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhH
Confidence 9999999999999999987 5556899999752 2334456 699999874
No 26
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.97 E-value=1.1e-31 Score=236.96 Aligned_cols=118 Identities=24% Similarity=0.452 Sum_probs=107.6
Q ss_pred CchHHHHHHHHHHHHHHhc---CCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCC
Q 017425 243 PPKNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGL 319 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~---~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~ 319 (372)
|++.+.+||++|++.|++. ++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-- 82 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK-- 82 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC--
Confidence 5567899999999999985 57899999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 320 RLNPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 320 IfHPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||+ .+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 83 i~HPni~~~~G~iCl~iL~-------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 132 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILK-------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 132 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred CCccCCCCCCCEEeChhhh-------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccH
Confidence 9999999 59999999997 789999752 4556778999999874
No 27
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.97 E-value=1.1e-31 Score=245.43 Aligned_cols=116 Identities=23% Similarity=0.401 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
+.+.+||++|++.|+++++.||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~HPN 124 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR--IYHCN 124 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCC--Cccce
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|+ +.|+|++++ |..+|..|++++|+|.
T Consensus 125 V~~~G~ICL~iL~-------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~ 168 (194)
T 3bzh_A 125 INSQGVICLDILK-------DNWSPALTISKVLLSICSLLTDCNPADPLVG 168 (194)
T ss_dssp BCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred ECCCCceechhhh-------ccCCCcCcHHHHHHHHHHHHhCCCCccchhH
Confidence 9999999999997 789999752 4456678999999873
No 28
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.97 E-value=6.9e-32 Score=240.25 Aligned_cols=119 Identities=24% Similarity=0.497 Sum_probs=107.2
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecCC-----CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCC
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEA-----RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG 318 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~Ed-----di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~ 318 (372)
+..+.+||++|++.|++++|+||++.+.++ |++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~- 86 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPP- 86 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCC-
Confidence 346899999999999999999999998766 89999999999999999999999999999999999999999999
Q ss_pred CccccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 319 LRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 319 ~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||+.+|+|||++|+. .++|+|+++. |..+|.+|++++|+|.
T Consensus 87 -i~HPnV~~~G~iCl~iL~~-----~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~ 137 (163)
T 3rcz_B 87 -LFHPNVYPSGTVCLSILNE-----EEGWKPAITIKQILLGIQDLLDDPNIASPAQT 137 (163)
T ss_dssp -CCSTTBCTTSBBCCGGGCT-----TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCH
T ss_pred -CccCCCCCCCcEeccccCC-----CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 9999999999999999972 3579999752 4456668999999874
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.97 E-value=9.5e-32 Score=237.18 Aligned_cols=118 Identities=24% Similarity=0.478 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecC-----CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCE-----ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGL 319 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~E-----ddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~ 319 (372)
..+.+||++|++.|+++++.||++.+.+ +|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 3 ~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-- 80 (157)
T 2gjd_A 3 SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG-- 80 (157)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT--
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC--
Confidence 4688999999999999999999998865 489999999999999999999999999999999999999999999
Q ss_pred ccccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 320 RLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 320 IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+|||||+.+|+|||++|+. .++|+|+++. |..+|.+|++++|+|.
T Consensus 81 i~HPnv~~~G~iCl~iL~~-----~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 131 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNE-----DQDWRPAITLKQIVLGVQDLLDSPNPNSPAQE 131 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCT-----TTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCH
T ss_pred CccCCCCCCCcEeeecccC-----CCCCCCCCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 9999999999999999983 2489999752 3445668999999874
No 30
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.97 E-value=2e-31 Score=235.94 Aligned_cols=120 Identities=23% Similarity=0.428 Sum_probs=107.4
Q ss_pred CchHHHHHHHHHHHHHHhcCCCceEEEecC-----CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCE-----ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P~gIsV~p~E-----ddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
|+..+.+||++|++.|++++|.||.+.+.+ +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 456789999999999999999999998763 589999999999999999999999999999999999999999999
Q ss_pred CCccccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 318 GLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 318 ~~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||+.+|+|||++|+. .++|+|+++. |..+|..|++++|+|.
T Consensus 84 --i~HPnv~~~G~iCl~iL~~-----~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 134 (161)
T 2grr_A 84 --LFHPNVYPSGTVCLSILEE-----DKDWRPAITIKQILLGIQELLNEPNIQSPAQA 134 (161)
T ss_dssp --CCSTTBCTTSBBCCGGGCT-----TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred --cccCCCCCCCeEeehhcCC-----CCCcCCCCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 9999999999999999973 2589999752 3455668999999874
No 31
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.97 E-value=2.4e-31 Score=242.95 Aligned_cols=116 Identities=24% Similarity=0.466 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHHHHhc---CCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 245 KNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~---~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
..+.+||++|++.|+++ ++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||
T Consensus 4 ~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~ 81 (201)
T 3k9o_A 4 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK--IW 81 (201)
T ss_dssp CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC--cc
Confidence 45789999999999986 46899999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+ .+|+|||++|. +.|+|+++. |..+|.+|++++|+|.
T Consensus 82 HPnv~~~~G~iCl~iL~-------~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~ 129 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK-------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 129 (201)
T ss_dssp BTTBCTTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred cCCCcCCCCeeeCcccc-------cCCCCCCCHHHHHHHHHHHhcCCCCCCcccH
Confidence 99999 59999999997 799999752 4556678999999874
No 32
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.97 E-value=2.9e-31 Score=242.63 Aligned_cols=116 Identities=22% Similarity=0.472 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHhcCC-------------CceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCe
Q 017425 245 KNWAKKIQEEWKILEKNLP-------------DTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPS 311 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P-------------~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPk 311 (372)
..+.+||++|++.|+++++ .||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3578999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCccccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 312 VYYYSGGLRLNPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 312 V~F~T~~~IfHPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+|.|+ ||||||+ .+|+|||++|+ +.|+|++++ |..+|.+|++++|+|.
T Consensus 111 V~F~T~--i~HPNI~~~~G~ICL~iL~-------~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~ 166 (193)
T 2f4z_A 111 MKFVTK--IWHPNISSQTGAICLDILK-------HEWSPALTIRTALLSIQAMLADPVPTDPQDA 166 (193)
T ss_dssp EEESSC--CCBTTBCTTTCBBCCGGGT-------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred EEEecC--CccCCCcCCCCEEECcccc-------ccCCCCCCHHHHHHHHHHHHhCCCCCCcccH
Confidence 999999 9999999 69999999997 789999762 3456678999999874
No 33
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.97 E-value=4.3e-31 Score=232.04 Aligned_cols=114 Identities=24% Similarity=0.498 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHhcCCCceEE-EecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 247 WAKKIQEEWKILEKNLPDTIFV-RVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV-~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
+.+||++|++.|+++++.||.+ .+.++|+++|+++|. |++|||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnV 81 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTK--IYHPNV 81 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCC--CccCcC
Confidence 6799999999999999999999 788999999999999 999999999999999999999999999999999 999999
Q ss_pred CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+.+|+|||++|+ .+.|+|+++. |..+|.+|++++|+|.
T Consensus 82 ~~~G~iCl~iL~------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 125 (155)
T 1wzv_A 82 DENGQICLPIIS------SENWKPCTKTCQVLEALNVLVNRPNIREPLRM 125 (155)
T ss_dssp CTTCBCCCGGGC------TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSH
T ss_pred CCCCeEeecCCC------ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHH
Confidence 999999999994 2799999752 3456668999999874
No 34
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=8.4e-31 Score=233.43 Aligned_cols=120 Identities=16% Similarity=0.223 Sum_probs=104.0
Q ss_pred CchHHHHHHHHHHHHHHhcCCCc-eEEEe-cCCC--cceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCC
Q 017425 243 PPKNWAKKIQEEWKILEKNLPDT-IFVRV-CEAR--MELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG 318 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P~g-IsV~p-~Edd--i~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~ 318 (372)
....+.+||++|++.|++++++| +.+.+ .++| ++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 22 v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~- 100 (160)
T 2a4d_A 22 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK- 100 (160)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC-
T ss_pred eechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC-
Confidence 34678999999999999999988 77776 5555 8999999999999999999999999999999999999999999
Q ss_pred CccccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhh-CCCCCCCCCc
Q 017425 319 LRLNPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRR-CPEVTMTMHL 369 (372)
Q Consensus 319 ~IfHPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLl-sP~~D~~i~~ 369 (372)
+|||||+ .+|+|||++|+.| +.|+|+++. |..+|. .|++++|+|.
T Consensus 101 -i~HPNV~~~~G~ICl~iL~~~-----~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ 153 (160)
T 2a4d_A 101 -INMNGVNSSNGVVDPRAISVL-----AKWQNSYSIKVVLQELRRLMMSKENMKLPQPP 153 (160)
T ss_dssp -CCCTTBCTTTCBBCGGGSHHH-----HTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCC
T ss_pred -ceeCCEECCCCEEehhhcCCc-----cCCCccCcHHHHHHHHHHHHccCCCCCCCCCh
Confidence 9999999 7999999999754 689999752 223333 4899999875
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.97 E-value=1.9e-30 Score=232.33 Aligned_cols=119 Identities=25% Similarity=0.427 Sum_probs=103.9
Q ss_pred CchHHHHHHHHHHHHHHh-c-C------CC---ceEEEe-cCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCC
Q 017425 243 PPKNWAKKIQEEWKILEK-N-L------PD---TIFVRV-CEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPP 310 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k-~-~------P~---gIsV~p-~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PP 310 (372)
|+..+.+||++|++.|++ . + |. ++.+.+ .++|+++|+++|.||++|||+||+|+|+|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 556799999999999998 4 3 43 567777 8889999999999999999999999999999999999999
Q ss_pred eEEEee-CCCccccCc-CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 311 SVYYYS-GGLRLNPNL-YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 311 kV~F~T-~~~IfHPNV-y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+|+|.| + |||||| +.+|+|||++|+ .+.|+|+++. |..+|.+|++++|+|.
T Consensus 83 ~v~f~t~~--i~HPni~~~~G~iCl~iL~------~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~ 141 (172)
T 2y9m_A 83 KISFMQNN--ILHCNVKSATGEICLNILK------PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDV 141 (172)
T ss_dssp EEEECTTS--CCCTTEETTTTEECCGGGS------TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSH
T ss_pred EEEEeeCC--eecCCCcCCCCEEeccccC------CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 999999 8 999999 589999999996 3789999752 3456668999999874
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1.4e-30 Score=230.72 Aligned_cols=113 Identities=26% Similarity=0.363 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcccc
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNP 323 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~-p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHP 323 (372)
+.+.+||++|++.| ++++||++. +.++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HP 79 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM--VYHP 79 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC--CCBT
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecC--CccC
Confidence 46899999999999 578899998 7889999999988 9999999999999999999999999999999999 9999
Q ss_pred CcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 324 NLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 324 NVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 80 nv~~~G~iCl~iL~-------~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~ 124 (160)
T 1y8x_A 80 NIDLEGNVCLNILR-------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNK 124 (160)
T ss_dssp TBCTTCBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCH
T ss_pred cCCCCCeEEcccch-------hhccCCCCHHHHHHHHHHHHhCCCCCCccCH
Confidence 99999999999997 789999752 3455668999999874
No 37
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.97 E-value=3.1e-30 Score=244.67 Aligned_cols=119 Identities=24% Similarity=0.449 Sum_probs=108.6
Q ss_pred CCchHHHHHHHHHHHHHHhc---CCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCC
Q 017425 242 KPPKNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG 318 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~---~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~ 318 (372)
.++..+.+||++|++.|+++ ++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 53 ~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~- 131 (253)
T 3e46_A 53 DMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK- 131 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCC-
Confidence 45678999999999999986 47899999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 319 LRLNPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 319 ~IfHPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||+ .+|+|||++|. +.|+|++++ |..+|.+|++++|+|.
T Consensus 132 -i~HPNV~~~~G~ICL~iL~-------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~ 181 (253)
T 3e46_A 132 -IWHPNISSVTGAICLDILK-------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 181 (253)
T ss_dssp -CCBTTBCTTTCBBCCGGGT-------TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred -CccCCccCCCCeeeccccc-------CCCCCCCCHHHHHHHHHHHhcCCCCCChhhH
Confidence 9999999 59999999997 799999752 4556678999999874
No 38
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=2.5e-30 Score=229.14 Aligned_cols=118 Identities=15% Similarity=0.301 Sum_probs=103.4
Q ss_pred CCchHHHHHHHHHHHHHHhc-CCCceEEEecC-C--CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 242 KPPKNWAKKIQEEWKILEKN-LPDTIFVRVCE-A--RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~-~P~gIsV~p~E-d--di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
.....+.+||++|++.|+++ ++.||++.+.. + +++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 45566889999999999998 78899998843 3 59999999999999999999999999999999999999999999
Q ss_pred CCccccCcCCCCcE---EecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 318 GLRLNPNLYDCGKV---CLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 318 ~~IfHPNVy~~GkV---CLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||||+.+|+| ||++|+ .|+|+++. |..+|.+|+++++++.
T Consensus 97 --i~HPNV~~~G~icisCL~iL~--------~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~ 147 (156)
T 2q0v_A 97 --IEMSCVDNCGRVIKNNLHILK--------NWNRNYTIETILISLRQEMLSSANKRLPQP 147 (156)
T ss_dssp --CCCTTBCTTSBBCGGGSHHHH--------TCCTTCCHHHHHHHHHHHTTSTTTTTCCCC
T ss_pred --cccCCCccCCeEehhhccccc--------CCCCcCcHHHHHHHHHHHHhCCCCCCcCCh
Confidence 999999999999 899996 48998652 3445568999998875
No 39
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=232.92 Aligned_cols=141 Identities=15% Similarity=0.181 Sum_probs=113.3
Q ss_pred ccccCCCCCcccccCCcCCCCCchHHHHHHHHHHHHHHhcCCCc-eEEEe-cCCC--cceEEEEEECCCCCCCCCcEEEE
Q 017425 222 DTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDT-IFVRV-CEAR--MELLRAVMIGPSGTPYHDGLFVF 297 (372)
Q Consensus 222 d~v~~~sdHhf~~~~~~~~~~s~s~a~KRL~kElk~L~k~~P~g-IsV~p-~Edd--i~~W~vvI~GP~gTPYeGGlF~f 297 (372)
..+..+++||+..-...........+.+||++|++.|++++++| +.+.+ .+++ ++.|+++|.||++|||+||+|+|
T Consensus 11 ~~~s~~~~~~~~~p~~~~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l 90 (170)
T 2hlw_A 11 KSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90 (170)
T ss_dssp CCSCSSSCSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCE
T ss_pred ccccccccccccCCccccCCcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEE
Confidence 34456677777543322111223457899999999999999988 67776 5554 89999999999999999999999
Q ss_pred EEECCCCCCCCCCeEEEeeCCCccccCcC-CCCcEEecCCCCcCCCCCCCccchhHH------HHHhhh-CCCCCCCCCc
Q 017425 298 DCIFPPSYPNEPPSVYYYSGGLRLNPNLY-DCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRR-CPEVTMTMHL 369 (372)
Q Consensus 298 dI~FP~dYP~~PPkV~F~T~~~IfHPNVy-~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLl-sP~~D~~i~~ 369 (372)
+|.||++||++||+|+|.|+ +|||||+ .+|+|||++|+.| +.|+|+++. |..+|. .|++++|+|.
T Consensus 91 ~i~fp~~YP~~PP~v~F~T~--i~HPNV~~~~G~ICl~iL~~~-----~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ 163 (170)
T 2hlw_A 91 KIECGPKYPEAPPFVRFVTK--INMNGVNSSNGVVDPRAISVL-----AKWQNSYSIKVVLQELRRLMMSKENMKLPQPP 163 (170)
T ss_dssp EEECCSSCTTSCCEEEECBC--CCCSSBCSSSCBBCTTTCHHH-----HTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCS
T ss_pred EEECCCCCCCCCCeeEEecc--cccCCEeCCCCEEEhhhcCCC-----CCCCccCcHHHHHHHHHHHHccCCCCCCCCCc
Confidence 99999999999999999999 9999999 8999999999754 689999752 233444 4899998875
No 40
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.97 E-value=4e-31 Score=245.32 Aligned_cols=114 Identities=26% Similarity=0.526 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~p~Ed-di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
+.+||++|++.|++++++||++.+.++ +++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||||||
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~--i~HPNI 80 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK--VYHPNI 80 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTT--CCCSSS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCC--CccCcC
Confidence 679999999999999999999998776 56799999999999999999999999999999999999999999 999999
Q ss_pred CC-CCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YD-CGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~-~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+. +|+|||++|+ +.|+|++++ |..+|.+|++++|+|.
T Consensus 81 ~~~~G~ICL~iL~-------~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~ 124 (215)
T 1tte_A 81 SSVTGAICLDILR-------NAWSPVITLKSALISLQALLQSPEPNDPQDA 124 (215)
T ss_dssp CSSSSCCCSSTTT-------CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCH
T ss_pred cCCCCEEECccCC-------CCCCCcCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 98 9999999997 799999752 4556668999999874
No 41
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.96 E-value=2.5e-30 Score=233.65 Aligned_cols=116 Identities=25% Similarity=0.331 Sum_probs=104.5
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCc
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLR 320 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~-p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~I 320 (372)
...+.+.+||++|++.| ++++||++. +.++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 22 ~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~--i 96 (180)
T 2nvu_C 22 KKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM--V 96 (180)
T ss_dssp CSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSC--C
T ss_pred CCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceecc--C
Confidence 34557899999999999 578899998 7889999999988 9999999999999999999999999999999999 9
Q ss_pred cccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 321 LNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 321 fHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|||||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 97 ~HPNV~~~G~iCl~iL~-------~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~ 144 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILR-------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNK 144 (180)
T ss_dssp CBTTBCTTSBBCCGGGT-------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSH
T ss_pred ccCCCCCCCcEEccccc-------ccCCCCCCHHHHHHHHHHHHhCCCCCCccCH
Confidence 99999999999999997 789999752 3455668999999874
No 42
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.96 E-value=1.7e-30 Score=231.17 Aligned_cols=118 Identities=17% Similarity=0.338 Sum_probs=105.0
Q ss_pred CchHHHHHHHHHHHHHHhcC------------CCceEEEecCCCcceEEEEEECCCCCCCC--CcEEEEEEECCCCCCCC
Q 017425 243 PPKNWAKKIQEEWKILEKNL------------PDTIFVRVCEARMELLRAVMIGPSGTPYH--DGLFVFDCIFPPSYPNE 308 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~------------P~gIsV~p~Eddi~~W~vvI~GP~gTPYe--GGlF~fdI~FP~dYP~~ 308 (372)
|++.+.+||++|++.|++++ +.+|.+.+.++|++.|+++|.||++|||+ ||.|+|+|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 34457899999999999987 77899999999999999999999999999 99999999999999999
Q ss_pred CCeEEEeeCCCccccCcCCCCcEEecCCCCcCCCCCCCccchhH---HH---HHhhhC---CCCCCCCCc
Q 017425 309 PPSVYYYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKS---TM---LQGRRC---PEVTMTMHL 369 (372)
Q Consensus 309 PPkV~F~T~~~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~S---tI---LQVLls---P~~D~~i~~ 369 (372)
||+|+|.|+ +|||||+.+|+|||++|+ ++|+|+++ +| ++.|++ |++++++|.
T Consensus 85 pP~v~f~t~--i~HPnv~~~G~iCl~il~-------~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~ 145 (167)
T 4ds2_A 85 PPTVRFVTP--VYSPLVTGEGGICDRMVN-------DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNP 145 (167)
T ss_dssp CCEEEESSC--CCCSSCCTTSCCCTHHHH-------TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCH
T ss_pred CCEEEEeCC--cccccCCCCCEEEcccCc-------CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhH
Confidence 999999999 999999999999999997 79999976 23 333333 788888873
No 43
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.96 E-value=1.8e-30 Score=227.91 Aligned_cols=114 Identities=23% Similarity=0.475 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHhcCCCceEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~-p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
+.+||++|++.|+++++.||.+. +.++|++.|+++|. |++|||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv 79 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTK--IYHPNI 79 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSC--CCCTTB
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCC--CccccC
Confidence 56899999999999999999754 57789999999998 999999999999999999999999999999999 999999
Q ss_pred CCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 326 YDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
+.+|+|||++|+ .++|+|+++. |..+|.+|++++|+|.
T Consensus 80 ~~~G~iCl~iL~------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~ 123 (154)
T 1c4z_D 80 DEKGQVCLPVIS------AENWKPATKTDQVIQSLIALVNDPQPEHPLRA 123 (154)
T ss_dssp CTTCBBCCTTTS------SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCH
T ss_pred CCCCEEECCCCC------CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhH
Confidence 999999999996 2789999752 4456668999999874
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=234.95 Aligned_cols=111 Identities=21% Similarity=0.411 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
.+.+||++|++.|++ .||.+.+. ++++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||||||
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~--i~HPNV 98 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNK--IFHPNI 98 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTTB
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecC--CccCcC
Confidence 589999999999985 47888876 579999999999999999999999999999999999999999999 999999
Q ss_pred CC-CCcEEecCCCCcCCCCCCCccchhHH-------HHHhhhCCCCCCCCCc
Q 017425 326 YD-CGKVCLSLLGTWTGKSTEMWDKNKST-------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y~-~GkVCLSLL~TWsG~~~E~WsPa~St-------ILQVLlsP~~D~~i~~ 369 (372)
+. +|+|||++|+ +.|+|+++. |..+|..|++++|+|.
T Consensus 99 ~~~~G~ICL~iL~-------~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~ 143 (179)
T 2z5d_A 99 DEASGTVCLDVIN-------QTWTALYDLTNIFESFLPQLLAYPNPIDPLNG 143 (179)
T ss_dssp CTTTCBBCHHHHH-------HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCH
T ss_pred CCCCCeEeccccc-------cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCH
Confidence 98 9999999997 789999751 3335568999999874
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.96 E-value=1.7e-30 Score=228.49 Aligned_cols=111 Identities=23% Similarity=0.420 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCcC
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLY 326 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNVy 326 (372)
+.+||++|++.|++. |+.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||||+
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPni~ 77 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNK--LLHPNVD 77 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCTTBC
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecC--CccCcCc
Confidence 458999999999874 78899999999999999999999999999999999999999999999999999 9999999
Q ss_pred -CCCcEEecCCCCcCCCCCCCccchhHH------HH-HhhhCCCCCCCCCc
Q 017425 327 -DCGKVCLSLLGTWTGKSTEMWDKNKST------ML-QGRRCPEVTMTMHL 369 (372)
Q Consensus 327 -~~GkVCLSLL~TWsG~~~E~WsPa~St------IL-QVLlsP~~D~~i~~ 369 (372)
.+|+|||++|+ +.|+|+++. ++ ++|..|++++|+|.
T Consensus 78 ~~~G~iCl~il~-------~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~ 121 (152)
T 2onu_A 78 EASGSVCLDVIN-------QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNS 121 (152)
T ss_dssp TTTCBBCHHHHH-------HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSH
T ss_pred CcCCeEeccccc-------ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccH
Confidence 59999999997 789999752 23 45558999999874
No 46
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.96 E-value=5.6e-30 Score=221.58 Aligned_cols=114 Identities=18% Similarity=0.303 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHhc-CCCceEEEecC-C--CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCcc
Q 017425 246 NWAKKIQEEWKILEKN-LPDTIFVRVCE-A--RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRL 321 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~-~P~gIsV~p~E-d--di~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~If 321 (372)
.+.+||++|++.|+++ ++.||++.+.. + +++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~ 83 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK--IN 83 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC--CC
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc--cc
Confidence 4779999999999998 78899998843 3 48999999999999999999999999999999999999999999 99
Q ss_pred ccCcCCC-CcE--EecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 322 NPNLYDC-GKV--CLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 322 HPNVy~~-GkV--CLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
||||+.+ |+| ||++|+ .|+|+++. |..+|.+|+++++++.
T Consensus 84 HPnv~~~~G~i~~cL~~l~--------~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~ 132 (138)
T 1jat_B 84 LPCVNPTTGEVQTDFHTLR--------DWKRAYTMETLLLDLRKEMATPANKKLRQP 132 (138)
T ss_dssp CTTBCTTTCBBCTTSHHHH--------TCCTTCCHHHHHHHHHHHHTSHHHHTSCCC
T ss_pred cCCEeCCCCEEeeecccCC--------CCCCcCcHHHHHHHHHHHHcCCCCCCCCCc
Confidence 9999976 999 999995 68888652 3445568888888875
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.96 E-value=3.1e-29 Score=249.94 Aligned_cols=116 Identities=23% Similarity=0.425 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccC
Q 017425 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPN 324 (372)
Q Consensus 245 s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPN 324 (372)
+.+.|||++|++.|++++|+||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSC--CCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecc--ccccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 325 LYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 325 Vy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
|+.+|+|||++|+ ++|+|+++. |..+|..|++++|+|.
T Consensus 80 v~~~G~iCl~il~-------~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~ 123 (399)
T 4ddg_A 80 INSNGSISLDILR-------SQWSPALTISKVLLSICSLLCDPNPDDPLVP 123 (399)
T ss_dssp BCTTCBBCCGGGT-------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSH
T ss_pred cCCCCeEeCcccc-------cCCCccccHHHHHHHHHHHHcCCCCCchhhH
Confidence 9999999999997 799999752 4556679999999874
No 48
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.96 E-value=3.5e-29 Score=227.86 Aligned_cols=116 Identities=24% Similarity=0.353 Sum_probs=104.8
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCceEEE----ecCCCcc---eEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEE
Q 017425 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR----VCEARME---LLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYY 314 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~P~gIsV~----p~Eddi~---~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F 314 (372)
...+.+.+||++|++.|+ +|+||++. +.++|++ .|+++|. |++|||+||.|+|+|.||++||++||+|+|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 345678999999999998 78899998 8889999 9999997 888999999999999999999999999999
Q ss_pred eeCCCccccCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCCCCCCc
Q 017425 315 YSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVTMTMHL 369 (372)
Q Consensus 315 ~T~~~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D~~i~~ 369 (372)
.|+ ||||||+.+|+|||++|+ +.|+|+++. |..+|.+|++++|+|.
T Consensus 102 ~t~--i~HPnV~~~G~iCl~iL~-------~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~ 153 (190)
T 3o2u_A 102 LKK--IFHPNIDLKGNVCLNILR-------EDWSPALDLQSIITGLLFLFLEPNPNDPLNK 153 (190)
T ss_dssp CSC--CCCTTBCTTSBBCCGGGT-------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSH
T ss_pred ecC--cccCCCCCCCeEechhcc-------CCCCCCCCHHHHHHHHHHHHhCCCCCcchhH
Confidence 999 999999999999999997 799999752 4556678999999874
No 49
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.95 E-value=8.4e-29 Score=222.07 Aligned_cols=111 Identities=23% Similarity=0.486 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccccCc
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNL 325 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfHPNV 325 (372)
.+.+||++|++.|++++. ++ ..++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ ||||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~--i~HPNi 85 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNR--ILHPNV 85 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTTB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecC--cccccC
Confidence 567999999999999864 44 347899999999999999999999999999999999999999999999 999999
Q ss_pred C-CCCcEEecCCCCcCCCCCCCccchhHH------HH-HhhhCCCCCCCCCc
Q 017425 326 Y-DCGKVCLSLLGTWTGKSTEMWDKNKST------ML-QGRRCPEVTMTMHL 369 (372)
Q Consensus 326 y-~~GkVCLSLL~TWsG~~~E~WsPa~St------IL-QVLlsP~~D~~i~~ 369 (372)
+ .+|+|||++|+ +.|+|+++. |+ .+|..|++++|+|.
T Consensus 86 ~~~~G~iCl~iL~-------~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~ 130 (171)
T 1yf9_A 86 DERSGSVCLDVIN-------QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNV 130 (171)
T ss_dssp CTTTCBBCHHHHH-------HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCH
T ss_pred cccCCeEeccccc-------cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccH
Confidence 9 59999999997 789998752 23 34557999999874
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.95 E-value=4.2e-28 Score=220.32 Aligned_cols=114 Identities=23% Similarity=0.399 Sum_probs=92.3
Q ss_pred CchHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeCCCccc
Q 017425 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLN 322 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~~~IfH 322 (372)
..+.+.+||++|++.|++++++||.+.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ |
T Consensus 11 ~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~----~ 86 (187)
T 2f4w_A 11 APTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP----N 86 (187)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC----C
T ss_pred CccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC----C
Confidence 445689999999999999999999999999999999999999999999999999999999999999999999997 8
Q ss_pred cCcCCCCcEEecCCCCcCCCCCCCccchhHH------HHHhhhCCCCC
Q 017425 323 PNLYDCGKVCLSLLGTWTGKSTEMWDKNKST------MLQGRRCPEVT 364 (372)
Q Consensus 323 PNVy~~GkVCLSLL~TWsG~~~E~WsPa~St------ILQVLlsP~~D 364 (372)
||++.+|+|||++|++| .+.|+|+++. |+.+|.+|+++
T Consensus 87 ~~~~~~G~ICL~iL~~~----~~~W~P~~ti~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 87 GRFKCNTRLCLSITDFH----PDTWNPAWSVSTILTGLLSFMVEKGPT 130 (187)
T ss_dssp SSBCTTSCBC--------------CCTTCCHHHHHHHHHHHHHSCCCC
T ss_pred ceeccCCeEeeeccccC----ccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 99999999999999654 2789999752 33445567765
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.95 E-value=1.3e-28 Score=223.71 Aligned_cols=103 Identities=16% Similarity=0.285 Sum_probs=95.5
Q ss_pred CCchHHHHHHHHHHHHHHhcC---CCceEEEecCCCcceEEEEEECC-CCCCCCC-----------cEEEEEEECCCCCC
Q 017425 242 KPPKNWAKKIQEEWKILEKNL---PDTIFVRVCEARMELLRAVMIGP-SGTPYHD-----------GLFVFDCIFPPSYP 306 (372)
Q Consensus 242 ~s~s~a~KRL~kElk~L~k~~---P~gIsV~p~Eddi~~W~vvI~GP-~gTPYeG-----------GlF~fdI~FP~dYP 306 (372)
.++..+.+||++|++.|++++ +.+|.+.+.++|++.|+++|.|| ++|||+| |.|+|+|.||++||
T Consensus 23 ~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 23 SGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 566789999999999999988 67899999999999999999998 9999998 89999999999999
Q ss_pred CCCCeEEEeeCCCcccc-CcCCCCcEEecCCCCcCCCCCCCccchhH
Q 017425 307 NEPPSVYYYSGGLRLNP-NLYDCGKVCLSLLGTWTGKSTEMWDKNKS 352 (372)
Q Consensus 307 ~~PPkV~F~T~~~IfHP-NVy~~GkVCLSLL~TWsG~~~E~WsPa~S 352 (372)
++||+|+|.|+ +||| ||+.+|+|||++|+. ++|+|+++
T Consensus 103 ~~PP~V~f~tp--i~hPnnV~~~G~ICL~iL~~------~~WsP~~t 141 (186)
T 1zuo_A 103 FDPPFVRVVLP--VLSGGYVLGGGALCMELLTK------QGWSSAYS 141 (186)
T ss_dssp SSCCEEEEEES--CEESTTBCGGGBBCCGGGST------TTCCTTSC
T ss_pred CCCCeEEEeCC--ccCCCccCCCCcEEeccCCC------CCCCCcCc
Confidence 99999999999 9999 699999999999962 78999975
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.86 E-value=2.6e-23 Score=187.10 Aligned_cols=102 Identities=18% Similarity=0.292 Sum_probs=88.6
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEE
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDG----------LFVFDCIFPPSYPNEPPSVY 313 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGG----------lF~fdI~FP~dYP~~PPkV~ 313 (372)
...|.+||++|++.|++ ++.+..+++..|.++|.||+||||+|| .|.++|.||.+||++||+|+
T Consensus 30 ~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 30 RELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred cHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 46799999999999999 366777899999999999999999999 99999999999999999999
Q ss_pred EeeCCCccccCcCCCCcEEecCCCC--cCCCCCCCccchhHHHHHhh
Q 017425 314 YYSGGLRLNPNLYDCGKVCLSLLGT--WTGKSTEMWDKNKSTMLQGR 358 (372)
Q Consensus 314 F~T~~~IfHPNVy~~GkVCLSLL~T--WsG~~~E~WsPa~StILQVL 358 (372)
|.+.. +||||||.+|+|||++|.. | ..|+|.+. |.++|
T Consensus 104 F~~~~-~~hpnmY~~G~ICLdIL~kp~W-----s~~~P~~~-IahiL 143 (172)
T 2z6o_A 104 VPELD-GKTAKMYRGGKICLTDHFKPLW-----ARNVPKFG-LAHLM 143 (172)
T ss_dssp CGGGT-TTCSSBCTTSBBCCCTTHHHHH-----HHHTTSCC-HHHHH
T ss_pred eCCCC-CCCCCCCCCCcEechhhccccc-----cccCCccC-HHHHH
Confidence 99853 7999999999999999942 4 35669875 44444
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.58 E-value=2.6e-16 Score=139.90 Aligned_cols=92 Identities=21% Similarity=0.376 Sum_probs=78.9
Q ss_pred chHHHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEE
Q 017425 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDG----------LFVFDCIFPPSYPNEPPSVY 313 (372)
Q Consensus 244 ~s~a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGG----------lF~fdI~FP~dYP~~PPkV~ 313 (372)
...|..||.+|++.|.+ +|.....+-..|...+.||.||+|.|+ .|.++|.||.+||..||.|+
T Consensus 32 ~~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~ 105 (168)
T 3kpa_A 32 GDKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIA 105 (168)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEee
Confidence 35699999999999976 344444445679999999999999999 89999999999999999999
Q ss_pred EeeCCCccccCcCCCCcEEecCCCCcCCCCCCCccchhH
Q 017425 314 YYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKS 352 (372)
Q Consensus 314 F~T~~~IfHPNVy~~GkVCLSLL~TWsG~~~E~WsPa~S 352 (372)
|.+.. .+|||+|.+|+|||+++ |+|++.
T Consensus 106 Fp~ld-gkt~kmYr~GkICLdIh----------wkPlW~ 133 (168)
T 3kpa_A 106 LPELE-GKTVKMYRGGKICMTTH----------FFPLWA 133 (168)
T ss_dssp CGGGT-TTCSSEETTTEECCCTT----------HHHHHH
T ss_pred ccccc-CcCccccCCCcEEeccc----------cchhhH
Confidence 98842 69999999999999874 888764
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.49 E-value=5.3e-14 Score=125.90 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhcCCC---ceEEEecCCCcceEEEEEECCCCCCCCCcE---EEEEEECCCCCCCCCCeEEEee--CC-
Q 017425 248 AKKIQEEWKILEKNLPD---TIFVRVCEARMELLRAVMIGPSGTPYHDGL---FVFDCIFPPSYPNEPPSVYYYS--GG- 318 (372)
Q Consensus 248 ~KRL~kElk~L~k~~P~---gIsV~p~Eddi~~W~vvI~GP~gTPYeGGl---F~fdI~FP~dYP~~PPkV~F~T--~~- 318 (372)
.+|..+|+..+.+.-|. ...+...++....+.+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.+ ..
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 35667888877665552 233445666677788888888889999999 8899999999999999998865 11
Q ss_pred -----Ccc-ccCcCCCCcEEecCCCCcCCCCCCCccchhHH-------HHHhhhCCCCCC
Q 017425 319 -----LRL-NPNLYDCGKVCLSLLGTWTGKSTEMWDKNKST-------MLQGRRCPEVTM 365 (372)
Q Consensus 319 -----~If-HPNVy~~GkVCLSLL~TWsG~~~E~WsPa~St-------ILQVLlsP~~D~ 365 (372)
.|+ ||||+.+|+|||.+|. .|+|..++ |.++|.+|++|+
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~--------~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH--------AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG--------SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc--------cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 156 9999999999999995 68885322 445566788876
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.02 E-value=4.2e-10 Score=99.16 Aligned_cols=82 Identities=16% Similarity=0.238 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCC-ceEEEec---CCCcceEEEEEECCCCCCCCCcEEEE--EEECCCCCCCCCCeEEEeeC----CCc
Q 017425 251 IQEEWKILEKNLPD-TIFVRVC---EARMELLRAVMIGPSGTPYHDGLFVF--DCIFPPSYPNEPPSVYYYSG----GLR 320 (372)
Q Consensus 251 L~kElk~L~k~~P~-gIsV~p~---Eddi~~W~vvI~GP~gTPYeGGlF~f--dI~FP~dYP~~PPkV~F~T~----~~I 320 (372)
..+|+..+...-|. ...+... ..++..|.++|. .+|+|+.|.+ .|.||.+||+.||.| |.++ .++
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 35677777666552 1222222 246788899887 6899999995 999999999999999 5543 135
Q ss_pred cccCcCCCCcEEecCCC
Q 017425 321 LNPNLYDCGKVCLSLLG 337 (372)
Q Consensus 321 fHPNVy~~GkVCLSLL~ 337 (372)
.||||+.+|+||+.+|.
T Consensus 100 ~~~~Vd~~G~i~lpyL~ 116 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLH 116 (146)
T ss_dssp CBTTBCTTCBBCCHHHH
T ss_pred CCCCCCCCCCEeccccc
Confidence 89999999999999996
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.28 E-value=0.11 Score=42.99 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 247 WAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 247 a~KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
...+...|+..|+.-.+..+.+.. .....+++.|..-.+..-+.-.+.+.|.||.+||..||.+.+.+.
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~~--~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 79 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVLS--ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQ 79 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEECC--SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEcc--CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcC
Confidence 456778899999987776665432 123455555553222222344788999999999999999988763
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.71 E-value=0.21 Score=41.18 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCC--CcceEEEEEECCCCCCC--CCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 249 KKIQEEWKILEKNLPDTIFVRVCEA--RMELLRAVMIGPSGTPY--HDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 249 KRL~kElk~L~k~~P~gIsV~p~Ed--di~~W~vvI~GP~gTPY--eGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
.+...|+..|+.-.+..+.+..... ....+.+.|..+.+..- ..-.+.+.|.||++||..||.+.+.+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4578999999988777676543322 23344555543322111 124788999999999999999988764
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.88 E-value=0.41 Score=40.03 Aligned_cols=71 Identities=8% Similarity=0.104 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecC------CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCE------ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~E------ddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
....+...|+..|+.-.+..+.+.... .....+++.|.+..+ .-..-.+.+.|.||++||..||.|.+.+.
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 10 QYYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred chHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 445567889999988766555432211 123556777764332 21234788999999999999999998664
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.79 E-value=0.99 Score=37.44 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCC-----CcceEEEEEECCCC-C-CCCCcEEEEEEECCCCCCCCCCeEEEee
Q 017425 246 NWAKKIQEEWKILEKNLPDTIFVRVCEA-----RMELLRAVMIGPSG-T-PYHDGLFVFDCIFPPSYPNEPPSVYYYS 316 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P~gIsV~p~Ed-----di~~W~vvI~GP~g-T-PYeGGlF~fdI~FP~dYP~~PPkV~F~T 316 (372)
....+...|+..|+.-.+..+.+..... ....+++.|. |.+ . .-..-.+.|.|.||.+||..||.|.+..
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 4566778999999987776665432211 1244555554 222 0 0012468899999999999999998744
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.02 E-value=1.2 Score=38.48 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=45.7
Q ss_pred CchHHHHHHHHHHHHHHhcCC--CceEEEecC-------------CC-c--ceEEEEEECCCCCCCCCcEEEEEEECCCC
Q 017425 243 PPKNWAKKIQEEWKILEKNLP--DTIFVRVCE-------------AR-M--ELLRAVMIGPSGTPYHDGLFVFDCIFPPS 304 (372)
Q Consensus 243 s~s~a~KRL~kElk~L~k~~P--~gIsV~p~E-------------dd-i--~~W~vvI~GP~gTPYeGGlF~fdI~FP~d 304 (372)
+......+-..|+..|..-.| ..+.+.-.. .+ . ..+++.|.-.. + ...+.+.|.||.+
T Consensus 11 ~~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~~--~--~~~i~L~v~lP~~ 86 (154)
T 2daw_A 11 SVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEE--P--KVKIDLQVTMPHS 86 (154)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEETT--T--TEEEEEEEEECSS
T ss_pred hhhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecCC--C--CceEEEEEEcCCC
Confidence 345566677789999998776 556552100 01 1 24454443221 1 1379999999999
Q ss_pred CCCCCCeEEEeeC
Q 017425 305 YPNEPPSVYYYSG 317 (372)
Q Consensus 305 YP~~PPkV~F~T~ 317 (372)
||..||.+...+.
T Consensus 87 YP~~~P~i~l~~~ 99 (154)
T 2daw_A 87 YPYLALQLFGRSS 99 (154)
T ss_dssp TTSSCCEEEEECS
T ss_pred CCCCCCcEEEEeC
Confidence 9999999987764
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.27 E-value=0.68 Score=38.23 Aligned_cols=68 Identities=19% Similarity=0.132 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhcCCC--ceEEEe-cCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 249 KKIQEEWKILEKNLPD--TIFVRV-CEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 249 KRL~kElk~L~k~~P~--gIsV~p-~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
.+...|+..|+.-.+. .+.+.. ...+...+++.|...... =..-.+.+.|.||.+||..||.+.+.++
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 80 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINSE 80 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCCS
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEhh
Confidence 3457899999876553 443321 112234677776632210 0124789999999999999999876643
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=83.90 E-value=2.7 Score=35.80 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhcCC--CceEEEecC--------------CCc---ceEEEEE--ECCCCCCCCCcEEEEEEECCCC
Q 017425 246 NWAKKIQEEWKILEKNLP--DTIFVRVCE--------------ARM---ELLRAVM--IGPSGTPYHDGLFVFDCIFPPS 304 (372)
Q Consensus 246 ~a~KRL~kElk~L~k~~P--~gIsV~p~E--------------ddi---~~W~vvI--~GP~gTPYeGGlF~fdI~FP~d 304 (372)
....+-..|+..|+.-.+ .-+.+.-.. .-. ..+.+.| .++.+ ..-.+.+.|.||.+
T Consensus 8 ~~~e~Q~~EleaL~SIY~~~de~~~~~~~~~~~l~~~~~~~~~~~p~~~~~f~I~l~~~~~~~---~~~~l~L~v~lP~~ 84 (152)
T 2dax_A 8 EQAEAQLAELDLLASMFPGENELIVNDQLAVAELKDCIEKKTMEGRSSKVYFTINMNLDVSDE---KMAMFSLACILPFK 84 (152)
T ss_dssp HHHHHHHHHHHHHHHHCCSSSSEEESCHHHHHHHHHHHHHTCCCCCCSCEEEEEEEEEECSTT---CEEEEEEEEEECSS
T ss_pred chHHHHHHHHHHHHHhCCCCCeEEEcCchhHHHHHHHhhcccccCCCCceEEEEEEecCCCCc---cCceEEEEEECCCC
Confidence 345566778999988766 455442110 001 1333433 33321 12358899999999
Q ss_pred CCCCCCeEEEeeC
Q 017425 305 YPNEPPSVYYYSG 317 (372)
Q Consensus 305 YP~~PPkV~F~T~ 317 (372)
||..||.+.+.+.
T Consensus 85 YP~~~P~i~l~~~ 97 (152)
T 2dax_A 85 YPAVLPEITVRSV 97 (152)
T ss_dssp TTSSCCCCEEECT
T ss_pred CCCCCCeEEEEcc
Confidence 9999999988775
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=49.18 E-value=39 Score=30.59 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeC
Q 017425 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG 317 (372)
Q Consensus 249 KRL~kElk~L~k~~P~gIsV~p~Eddi~~W~vvI~GP~gTPYeGGlF~fdI~FP~dYP~~PPkV~F~T~ 317 (372)
.+|.+|+..|-=+ .+.-....+...++.+.... |....++|.++.+||.+||.+...-+
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP 62 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFP 62 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCS
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCC
Confidence 4677888887322 12222346777888888554 46889999999999999998876544
Done!