BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017426
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 239/354 (67%), Gaps = 15/354 (4%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL++M +VGICGSDVHY + R DFVVK+PMV+
Sbjct: 7 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE +G + KVGS V+ L PGDRV A++PG + CK GRYNL P + F
Sbjct: 67 GHEASGTVVKVGSLVRHLQPGDRV--------AIQPGAPRQTDEFCKIGRYNLSPTIFFC 118
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
ATPP G+L H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA + VL+ G
Sbjct: 119 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 178
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
AGPIGLV +LAA+A GA ++V+ D+ RLS AKE+GAD I+++S + ++IA++VE +
Sbjct: 179 AGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL- 237
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
+G+ +V+ +C G+ ++ + AT +GG + LVG+G +VPL AA REVD+ GV
Sbjct: 238 --LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGV 295
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
FRY NTWP+ + +L S ++VKPLVTHRF ++ EAFETS + G +KVM
Sbjct: 296 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 346
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 321 bits (823), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 230/355 (64%), Gaps = 12/355 (3%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++A L N L+++ +P +VL++M VGICGSDVHY + R ADF+VK+PMVI
Sbjct: 5 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE +G + KVG VK L GDRV A+EPG+ C RC CK G+YNLCP++ F
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRV--------AVEPGVPCRRCQFCKEGKYNLCPDLTFC 116
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
ATPP G+LA VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA + T VL++G
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIG 176
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
AGPIGLV++LAA+A+GA +V RL VAK GAD + V ++ + +E+I+
Sbjct: 177 AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 235
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
A+G +V+ DC+G K ++ + T GG + LVGMG +TVPL A RE+D+ VF
Sbjct: 236 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295
Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 371
RY N +P+ LE++ SG+ +VK LVTH F Q +AFE + + IKVM +
Sbjct: 296 RYCNDYPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 234/355 (65%), Gaps = 15/355 (4%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL+RM +VGICGSDVHY + R +F+VK+PMV+
Sbjct: 8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE +G +EKVGS VK L PGDRV A+EPG + CK GRYNL P + F
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKMGRYNLSPSIFFC 119
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
ATPP G+L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
AGPIG+VT+L A+A GA ++V+ D+ RLS AKEIGAD ++++S + Q+IA +VE
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE--- 236
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
+G +V+ +C G ++ + AT +GG + LVG+G TVPL AA+REVD+ GV
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGV 296
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
FRY NTWP+ + +L S ++VKPLVTHRF ++ EAFET + G +K+M
Sbjct: 297 FRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 226/346 (65%), Gaps = 14/346 (4%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL+R +VGICGSDVHY + R +F+VK+P V+
Sbjct: 8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE +G +EKVGS VK L PGDRV A+EPG + CK GRYNL P + F
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKXGRYNLSPSIFFC 119
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
ATPP G+L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
AGPIG VT+L A+A GA ++V+ D+ RLS AKEIGAD ++++S + Q+IA +VE
Sbjct: 180 AGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE--- 236
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
+G +V+ +C G ++ + AT +GG + LVG+G TVPL AA+REVD+ GV
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGV 296
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
FRY NTWP+ + L S ++VKPLVTHRF ++ EAFET +G
Sbjct: 297 FRYCNTWPVAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 199/332 (59%), Gaps = 16/332 (4%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+V V +++ GICGSDVH+ K +V+ V+GHE AG + V VK++ +V
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSI----KV- 96
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 162
GDRVA+EP + C C+ C GRYN C + F +TPPV G L V HPA C K+
Sbjct: 97 ---GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-G 152
Query: 163 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
N+S E GAM EPLSV + +RA + VLI GAGPIGL+TML A+A GA +VI D+
Sbjct: 153 NMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212
Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGLNKTMSTAL 280
D+ RL AKEI + + L E +KI ++ G GI+ V+ +C G+ +++ A+
Sbjct: 213 DEGRLKFAKEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAI 270
Query: 281 GATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL 340
A GGKV ++G+G +E+ +P A+VREVD+ +RY NTWP + L+ +G +D+ L
Sbjct: 271 WAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRL 330
Query: 341 VTHRFGFSQKEVEEAFETSARGGT-AIKVMFN 371
VTHRF ++ +AFET++ T AIKV
Sbjct: 331 VTHRFPL--EDALKAFETASDPKTGAIKVQIQ 360
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 21/342 (6%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P + GHE AG + ++G V+
Sbjct: 22 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE- 80
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
G V GD V++E I C +C C+ G+Y++C K F G A V PA
Sbjct: 81 ---GIEV----GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPA 132
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
+K P ++ E + EPL V I ++ VLI GAGP+GL+ + A+A GA
Sbjct: 133 QNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGA 191
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
+++ + D+R +AK++GAD + ++ +D+ +EV I G G+DV + +G K
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPK 247
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
+ L A G+V L+G+ ++T+ + + + + G+ TW LL+
Sbjct: 248 ALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ 307
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 372
SGK+++ P++TH++ GF + EEAFE R G KV+F L
Sbjct: 308 SGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 21/342 (6%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P + GHE AG + ++G V+
Sbjct: 23 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE- 81
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
G V GD V++E I C +C C+ G+Y++C K F G A V PA
Sbjct: 82 ---GIEV----GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPA 133
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
+K P ++ E + EPL V I ++ VLI GAGP+GL+ + A+A GA
Sbjct: 134 QNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGA 192
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
+++ + D+R +AK++GAD + ++ +D+ +EV I G G+DV + +G K
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPK 248
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
+ L A G+V L+G+ ++T+ + + + + G+ TW LL+
Sbjct: 249 ALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ 308
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 372
SGK+++ P++TH++ GF + EEAFE R G KV+F L
Sbjct: 309 SGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 178/340 (52%), Gaps = 20/340 (5%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P ++GHE AG + +VG V+
Sbjct: 23 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
L GD ++ +E I C +C CK RY++C K F + G A+ + PA
Sbjct: 83 LQVGDYIS--------VETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPA 133
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
+K P ++ E A+ EPL V I + LI GAGP+GL+ + A+A GA
Sbjct: 134 KNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGA 192
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
+++ + ++R +AK++GAD + V+ +D + V I G G++V + +G K
Sbjct: 193 YPVIVSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPK 248
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
+ L A GG+V L+G+ E+T+ + + ++V G+ TW L++
Sbjct: 249 ALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQ 308
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 370
SGK+++ P++TH++ GF + EEAFE G T V F
Sbjct: 309 SGKLNLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 173/339 (51%), Gaps = 21/339 (6%)
Query: 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
+P GP ++LVR++A ICG+D+H K A ++ P+V GHE +GV+E VG
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVG------ 73
Query: 96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 155
PG R V GD V+LE I C C C+ G Y++C + G A VV PA+
Sbjct: 74 -PGVRRPQV-GDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAE 130
Query: 156 LCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP 215
+ P ++ E A+ EP VH + +VLI GAGPIGL+ + RA GA
Sbjct: 131 NAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAG 190
Query: 216 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 275
I++ D + YRL+ A+ AD +V L++ + +E +++ G+G++V + +G
Sbjct: 191 PILVSDPNPYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAA 244
Query: 276 MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRS 332
+ L A GG+ ++G+ + L V R + G+ R TW L+ S
Sbjct: 245 IHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYS 304
Query: 333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
G++D+ PL+THR S+ EAF A G A+KV+ +
Sbjct: 305 GRVDLSPLLTHRLPLSR--YREAFGLLA-SGQAVKVILD 340
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 21/334 (6%)
Query: 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
A L V + ++ +P GP D+LV+++A GICG+D H L +F P+ +GH
Sbjct: 26 AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E G++ + GS V+ + PG R+T GD P ISC RC C+ GR NLC ++
Sbjct: 82 EFCGIVVEAGSAVRDIAPGARIT---GD-----PNISCGRCPQCQAGRVNLCRNLRAIG- 132
Query: 140 PPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
+H G A V+ P F++P + GA CEPL+ +H + I + V I+G
Sbjct: 133 --IHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILG 190
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
G IGL+T+ AR GA +++ + +A+E+GA V S D+ E +
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVG 248
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVG 315
+ G+DV +CAG+ +T+ + AGG V ++G+ V + P + RE+ V+G
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308
Query: 316 VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
F +L+ +G I++ ++ R +
Sbjct: 309 SFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 161/351 (45%), Gaps = 56/351 (15%)
Query: 43 DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
+V V++ + G+CGSD+ HY P+ +GHE +G I+ VGS V
Sbjct: 27 EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
L PGD V VP L P C+ C C G Y+ C + F + G A +V
Sbjct: 75 LHPGDAVACVP-----LLP---CFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKR 125
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
F LP ++ +E+GA EP++VG+HA A NV+I+GAG IGL+ + A A GA
Sbjct: 126 KNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA 185
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCA 270
+ +D+ +L++AK GA S +Q + E+ Q + T A
Sbjct: 186 KSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------A 237
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF-RYKNTWP 324
G+ +T+ A+ ++ LVG H ++ LT A +E+ V+G + Y + WP
Sbjct: 238 GVPQTVELAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYSSPWP 295
Query: 325 -----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
LL K+ ++PL+ HR F + +A AR KV+
Sbjct: 296 GQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 42/355 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
LKI+ E P++ +VLVR+KA G+C +D+H D+ VK P++ GHE G++E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
+VG V L GDRV + P + +C CD+C G+ LC K A V G
Sbjct: 69 EVGPGVTHLKVGDRVGI---------PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDG 118
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
A AD K+PDN+S EE A C ++ A + P V I G G +G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLG 177
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
V + A+A G +V VD+ D +L +AKE+GAD +V + E+ K K G
Sbjct: 178 HVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGG 230
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKN 321
+ + A +A + GG LVG+ EM +P+ + + ++G + +
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 322 TWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
L+ GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 27/328 (8%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
N L I E+P+ +V V++K GICGSD H R + K P VIGHE GVI+
Sbjct: 30 NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--G 144
VG V++ RV G+RVA++P +SC C C G+ N+C + VH G
Sbjct: 87 AVGEGVESA----RV----GERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADG 135
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
+ V PA +K+P+ V+ + M EP ++ + VL+ GAGPIGL
Sbjct: 136 GFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLT 195
Query: 205 TMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKAMGT 261
+ + + +++ D D RL AKE GAD + S + AE+ G
Sbjct: 196 IVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK--------GI 247
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
+ D A + A+ ++ L+G V +E+ + N
Sbjct: 248 KPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNAN 307
Query: 322 TWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
+P+ ++ L G I + L+TH F F
Sbjct: 308 KFPVVIDWLSKGLIKPEKLITHTFDFQH 335
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 163/355 (45%), Gaps = 42/355 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
LKI+ E P++ +VLVR+KA G+C +D+H D+ VK P++ GHE G++E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
+VG V L GDRV + P + +C CD+C G+ LC K A V G
Sbjct: 69 EVGPGVTHLKVGDRVGI---------PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDG 118
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
A AD K+PDN+S EE A C ++ A + P V I G G G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFG 177
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
V + A+A G +V VD+ D +L +AKE+GAD +V + E+ K K G
Sbjct: 178 HVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGG 230
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKN 321
+ + A +A + GG LVG+ EM +P+ + + ++G + +
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 322 TWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
L+ GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
LK++ +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
IE+VG EV V GD VA+ P C +C+ G +LC ++
Sbjct: 73 RIEEVGDEV--------VGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GPI 201
G+ A V+ P +KL ++E + A R+A++ P ++++GA G +
Sbjct: 124 GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + A+A I+ VDV + L AK GAD ++ S+ QD E+ +I + G
Sbjct: 184 GTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GK 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
G D D KT+S GK +VG+ ++ + EV +G
Sbjct: 240 GADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
+ L + L +GK VKP+VT +E EA +
Sbjct: 300 SDFLGIMSLAEAGK--VKPMVTKTMKL--EEANEAIDN 333
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G L++ +P GP +V VR+KA + DV K + + P V+G + +GV
Sbjct: 11 GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85 IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
++ VG V+ PGD V + PG+SC RC+ C G NLCP + HG
Sbjct: 69 VDAVGPGVEGFAPGDEVVI--------NPGLSCGRCERCLAGEDNLCPRYQILGE-HRHG 119
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGAGP-I 201
+ A VV P P N+S EE A L+ + + P +VL+M AG +
Sbjct: 120 TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
+ + A+ FGA R++ + +L AK +GAD V + D +EV ++ G
Sbjct: 180 SVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GK 234
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFRY 319
G D D G + AT GG++ + G +E T+P R++ ++G
Sbjct: 235 GADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMAS 293
Query: 320 KNTWPLCLELLRSGKIDVKPLV 341
K+ L + GK+ KP+V
Sbjct: 294 KSRLFPILRFVEEGKL--KPVV 313
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 65/381 (17%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
G V T+ PGD+V +P C +C CK NLC +K + P
Sbjct: 77 GEGVTTVRPGDKVIPLFIP----------QCGKCSVCKHPEGNLC--LKNLSMPRGTMQD 124
Query: 141 ----------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV- 179
P+H L + + D +S+ + PL S G
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 240 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGH 296
N QD + ++++ M G+D SF+ G TM AL + C A G +VG+
Sbjct: 241 ----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPP 295
Query: 297 HEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
+ + P + + G F+ K++ P + + K + PL+TH F ++
Sbjct: 296 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EK 353
Query: 352 VEEAFETSARGGTAIKVMFNL 372
+ E F+ R G +I+ +
Sbjct: 354 INEGFDL-LRSGKSIRTILTF 373
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 65/381 (17%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
G V T+ PGD+V +P C +C CK NLC +K + P
Sbjct: 77 GEGVTTVRPGDKVIPLFIP----------QCGKCSVCKHPEGNLC--LKNLSMPRGTMQD 124
Query: 141 ----------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV- 179
P+H L + + D +S+ + PL S G
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 240 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGH 296
N QD + ++++ M G+D SF+ G TM AL + C A G +VG+
Sbjct: 241 ----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPP 295
Query: 297 HEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
+ + P + + G F+ K++ P + + K + PL+TH F ++
Sbjct: 296 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EK 353
Query: 352 VEEAFETSARGGTAIKVMFNL 372
+ E F+ R G +I+ +
Sbjct: 354 INEGFDL-LRSGKSIRTILTF 373
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
EL ++ P + L+ M+ G+C +D+H + DF K V+GHE G+++++G++V +
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
L GDRV++ C C++C G C E+K A V G +A + + A
Sbjct: 76 LQVGDRVSVAWFFE-------GCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVA 127
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIG-LVTMLAARAF 212
D K+PD + E + V + A + + + P +I GAG +G L A F
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF 187
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCA 270
GA +++ VD++ +L++AK+IGAD V+ N D+ +E++KI G G+ + CA
Sbjct: 188 GA-KVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCA 240
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 329
A+ + GK+ V + + EMT+ + V+V G + + +
Sbjct: 241 VARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQF 300
Query: 330 LRSGKIDVKPLVTHR 344
GK VKP+V R
Sbjct: 301 GAEGK--VKPIVATR 313
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G + L I+ E+ +V +++ A +C +D++ + A F P+V+GHE
Sbjct: 14 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
CAG++E VG V PGD+V +P P C RC C NLC +++ F P
Sbjct: 69 CAGIVESVGPGVTNFKPGDKV--IP----FFAP--QCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 141 PVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CE 173
+ L VV A+L ++ D +LE + C
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCG 179
Query: 174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
S A A + P + + G G +GL ++ + GA RI+ +D++ + AK +
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 234 GADNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 291
GA + + N +++ + V+ I + G+D S DCAG +T+ A+ T G G +
Sbjct: 240 GATDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295
Query: 292 VGMGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
VG EMT+P + R ++ G ++ ++ P + ++ K D+ LVTH F
Sbjct: 296 VGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G + L I+ E+ +V +++ A +C +D++ + A F P+V+GHE
Sbjct: 14 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
CAG++E VG V PGD+V +P P C RC C NLC +++ F P
Sbjct: 69 CAGIVESVGPGVTNFKPGDKV--IP----FFAP--QCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 141 PVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CE 173
+ L VV A+L ++ D +LE + C
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCG 179
Query: 174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
S A A + P + + G G +GL ++ + GA RI+ +D++ + AK +
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 234 GADNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 291
GA + + N +++ + V+ I + G+D S DCAG +T+ A+ T G G +
Sbjct: 240 GATDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295
Query: 292 VGMGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
VG EMT+P + R ++ G ++ ++ P + ++ K D+ LVTH F
Sbjct: 296 VGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
EL ++ P + L+ M+ G+C +D+H + D+ K V+GHE G+++++G++V +
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
L GDRV++ C C++C G C E+K A V G +A + + A
Sbjct: 76 LQVGDRVSVAWFFE-------GCGHCEYCVSGNETFCREVKN-AGYSVDGGMAEEAIVVA 127
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIG-LVTMLAARAF 212
D K+PD + E + V + A + + + P +I GAG +G L A F
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF 187
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCA 270
GA +++ VD++ +L++AK+IGAD I+ N D+ +E++KI G G+ + CA
Sbjct: 188 GA-KVIAVDINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCA 240
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 329
A+ + GK+ V + + EMT+ + V+V G + + +
Sbjct: 241 VARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQF 300
Query: 330 LRSGKIDVKPLVTHR 344
GK VKP+V R
Sbjct: 301 GAEGK--VKPIVATR 313
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 158/362 (43%), Gaps = 55/362 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGICG+D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
G V T+ PGD+V +P P C +C CK N C + +
Sbjct: 77 GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
F P+H L + + D ++ + PL S G A
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
+ + P + V G F+ K P + + K + L+TH F +++ E
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
F+
Sbjct: 359 FD 360
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V + + C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLATPQ--------CGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
L I +P GP + V ++A G+C +D+H + D+ VK P + GHE G +
Sbjct: 38 LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
VGS VK + GDRV +P A C C HC GG LC E + V+G
Sbjct: 94 AVGSGVKHVKEGDRVG-IPWLYTA------CGHCRHCLGGWETLCEE-QLNTGYSVNGGF 145
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
A VV + LP N+ E A +C ++V + + P V+I G G +G +
Sbjct: 146 AEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHM 204
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
+ ARA G + VD+DD +L +A+ +GA V+ N + +A+ I+K G
Sbjct: 205 AVQYARAMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQ 259
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
A K ALG GG V L G+
Sbjct: 260 GVLVTAVSPKAFEQALGMVARGGTVSLNGL 289
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LWTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 152/348 (43%), Gaps = 57/348 (16%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
PGDRV +VP A+ P WR + G + M KF V G +
Sbjct: 75 FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
V+ AD+ LP + LE M + ++ G H A+I V ++G GP+GL+ +
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
A+ GA RI+ V + AK GA +IV N +D E + + G G+D +
Sbjct: 185 GAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
G M+TA+ GG + V GM H + L P
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ R + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
L+I+ ++P GP VLV+++A G+C +D+H + D+ VK P+ + GHE G +
Sbjct: 19 LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
VGS V + GDRV +P A C C+HC G LC E + V+G
Sbjct: 75 AVGSGVTRVKEGDRVG-IPWLYTA------CGCCEHCLTGWETLC-ESQQNTGYSVNGGY 126
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
A V+ + LP NV E A +C ++V ++ N P V I G G +G V
Sbjct: 127 AEYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHV 185
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
+ ARA G + +D+DD +L +A+++GA V + VE IQ+ +G G
Sbjct: 186 AVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAH 238
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
A N A+G GG + LVG+ + P+ ++ + + G
Sbjct: 239 GVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G + G+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVITGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 152/348 (43%), Gaps = 57/348 (16%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
PGDRV +VP A+ P WR + G + M KF V G +
Sbjct: 75 FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
V+ AD+ LP + LE M + ++ G H A+I V ++G GP+GL+ +
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
A+ GA RI+ V + AK GA +IV N +D E + + G G+D +
Sbjct: 185 GAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
G M+TA+ GG + V GM H + L P
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P+ GP ++L+++ A G+C SD+ ++ + A + P+ +GHE G + ++G V
Sbjct: 21 PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VV 151
GD V A+ C C C GR N C TPP GS + +V
Sbjct: 80 VGDAV--------AVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIV 131
Query: 152 HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGPETNVLIMGAGPIGLVTMLAA 209
A + D + + + HA R +GP + +++G G +G V +
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQIL 191
Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
RA A R++ VD+DD RL++A+E+GAD VK D E+ G G FD
Sbjct: 192 RAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDF 246
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLC 326
G T+ TA G + +VG+ H ++ + P V Y T
Sbjct: 247 VGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT-----PYWGTRSEL 301
Query: 327 LE---LLRSGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 362
+E L R+G++D+ H F+ E A+ E S RG
Sbjct: 302 MEVVALARAGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
G V T+ PGD+V +P P C +C CK N C + +
Sbjct: 77 GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
F P+H L + + D ++ + PL S G A
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
+ + P + V G F+ K P + + K + L+TH F +++ E
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FETSARGGTAIKVM 369
F+ G + V+
Sbjct: 359 FDLLHSGKSICTVL 372
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +V +
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVAVTPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 71/367 (19%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
G + +VGSEVK PGDRV + P R + ++ G ++ W+ + K G +
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
++F V+ AD+ LP ++ LE M + ++ G H A+I
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIE 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
V ++G GP+GL+ + A+ GA RI+ V + AK GA +IV N +D
Sbjct: 166 LGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDG 221
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
E + + G G+D + G M+TA+ GG + V
Sbjct: 222 PIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
GM H + L P G R + + +++ ++D+ LVTH + GF
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
+EEA
Sbjct: 330 --IEEAL 334
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 55/362 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
G V T+ PGD+V +P P C +C CK N C + +
Sbjct: 77 GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
F P+H L + + D ++ + PL S G A
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
+ + P + V G F+ K P + + K + L+TH F +++ E
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
F+
Sbjct: 359 FD 360
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 55/362 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
G V T+ PGD+V +P P C +C CK N C + +
Sbjct: 77 GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
F P+H L + + D ++ + PL S G A
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
+ + P + V G F+ K P + + K + L+TH F +++ E
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
F+
Sbjct: 359 FD 360
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G + G+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVISGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
G V T+ PGD+V +P P C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKV--IP----LWTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
P+H L + + D +S+ + PL S G A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
+ A + + + G G GL ++ +A GA RI+ VD++ + + AKE+GA V
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
N QD + ++++ M G+D SF+ G TM TAL + C A G +VG+
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
+ + P + + G F+ K++ P + + K + PL+TH F +++
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGESIRTILTF 374
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 47/358 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M AVGICG+D H + V P+++GHE AG++E V
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------M 134
G V T+ PGD+V +P +A+ C +C CK N C P+
Sbjct: 77 GEGVTTVKPGDKV--IP---LAIP---QCGKCRICKNPESNYCLKNDVSNPQGTLQDGTS 128
Query: 135 KFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRAN 186
+F P+H + + V + K+ LE+ + S G A A
Sbjct: 129 RFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
+ P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA + N Q
Sbjct: 189 VTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQ 244
Query: 247 DIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 304
D + ++++ K M G+D SF+ G L+ M++ L A G +VG+ + +
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMN 304
Query: 305 P-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
P + ++G F+ K P + + K + L+TH F +++ E F+
Sbjct: 305 PMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 48/373 (12%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + + V P+++GHE AG++E V
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------M 134
G V T+ PGD+V +P P C +C CK N C +
Sbjct: 77 GEGVTTVKPGDKV--IP----LFTP--QCGKCRICKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 135 KFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRAN 186
+F + P+H + + V + K+ LE+ + S G A + A
Sbjct: 129 RFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
+ P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA + N Q
Sbjct: 189 VTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQ 244
Query: 247 DIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 304
D + ++++ K M G+D SF+ G L+ M++ L A G +VG+ + +
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSIN 304
Query: 305 P-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
P + + G F+ K + P + + K + L+T+ F +++ E F+
Sbjct: 305 PMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL- 361
Query: 360 ARGGTAIKVMFNL 372
R G +I+ +
Sbjct: 362 LRSGKSIRTVLTF 374
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 151/348 (43%), Gaps = 57/348 (16%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
PGDRV +VP A+ P WR + G + M KF V G +
Sbjct: 75 FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
V+ AD+ LP + LE M + ++ G H ANI V ++G GP+GL+++
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
A GA RI V + +A E GA +I+ DI E++ ++ G G+D
Sbjct: 185 GANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVDKVV 240
Query: 268 DCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHEMTVPLTPAAVR 309
G T + A+ G + VGMGH + L P
Sbjct: 241 IAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 35/313 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L + FE+ + +LV + + G+CGSDVH R D V P+++GHE AG + +V
Sbjct: 30 LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------P 140
E + L + L PGD + GI+C C CK + LCP K + P
Sbjct: 87 NGEKRDL---NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYP 143
Query: 141 PVHGSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPET----NVLI 195
+ G ++ +V P K+ + L+ AM + G A + PE+ V+I
Sbjct: 144 HLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVI 201
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
GAGP+GL ++ AR+ GA ++++ RL +A+EIGAD ++ N ++ + VE+
Sbjct: 202 QGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEER 255
Query: 256 QKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+KA+ G G D + G ++ + GG + G+ + VP V E
Sbjct: 256 RKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK---VYE 312
Query: 311 VDVVGVFRYKNTW 323
V+ +K W
Sbjct: 313 WLVLKNATFKGIW 325
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 151/361 (41%), Gaps = 59/361 (16%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+ + ++P GP D LVR A+ C SD H + D + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTLVPGDRVALEP---------GISCWRCDHCKGGRYNLCPE 133
G I KVGS VK L GD+V +VP A+ P G G +++ +
Sbjct: 63 GQIVKVGSLVKRLKVGDKV-IVP----AITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV 193
F V+ + AN + P D+ K D V L + ++ G H ANI V
Sbjct: 118 GVFSEVFHVNEADANLALLPRDI--KPEDAVML-----SDMVTTGFHGAELANIKLGDTV 170
Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
++G GP+GL+++ A GA RI V + +A E GA +I+ DI E++
Sbjct: 171 CVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQIL 228
Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMG 295
K G G+D G T + A+ G + VGMG
Sbjct: 229 KATD--GKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMG 286
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
H + LTP G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 287 HKHIHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDA 333
Query: 356 F 356
Sbjct: 334 L 334
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 151/361 (41%), Gaps = 59/361 (16%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+ + ++P GP D LVR A+ C SD H + D + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTLVPGDRVALEP---------GISCWRCDHCKGGRYNLCPE 133
G I KVGS VK L GD+V +VP A+ P G G +++ +
Sbjct: 63 GQIVKVGSLVKRLKVGDKV-IVP----AITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV 193
F V+ + AN + P D+ K D V L + ++ G H ANI V
Sbjct: 118 GVFSEVFHVNEADANLALLPRDI--KPEDAVML-----SDMVTTGFHGAELANIKLGDTV 170
Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
++G GP+GL+++ A GA RI V + +A E GA +I+ DI E++
Sbjct: 171 CVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQIL 228
Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMG 295
K G G+D G T + A+ G + VGMG
Sbjct: 229 KATD--GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMG 286
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
H + LTP G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 287 HKHIHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDA 333
Query: 356 F 356
Sbjct: 334 L 334
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 155/348 (44%), Gaps = 57/348 (16%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
PGDRV +VP A+ P WR + G + M KF V G +
Sbjct: 75 FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
V+ AD+ LP + LE M + ++ G H A+I ++V+++G G +GL+ +
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
A+ GA RI+ V + AK GA +I+ I ++V K+ G G+D
Sbjct: 185 GAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
G ++T+S A+ GG + + GM H + L P
Sbjct: 241 MAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 49/374 (13%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + + + P+++GHE
Sbjct: 16 AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
AG++E +G V + PGD+V + L + C +C C NLC ++ +P
Sbjct: 72 AAGIVESIGPGVTNVKPGDKV-------IPLYAPL-CRKCKFCLSPLTNLCGKISNLKSP 123
Query: 141 -------------------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCE-PL 175
PV+ S +Q +D+ K+ D+ +LE +
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 176 SVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
S G A A + P + + G G +GL ++ +A GA RI+ +D++ + AK +G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL--- 291
A + + + I E + ++ K G+D + DCAG ++TM AL T AG C
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIG 300
Query: 292 VGMGHHEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 348
V G +TV P R ++ G ++ ++ P + ++ K ++ LVTH F
Sbjct: 301 VAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFD 360
Query: 349 QKEVEEAFETSARG 362
+ + EAF+ +G
Sbjct: 361 K--ISEAFDLMNQG 372
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 162/367 (44%), Gaps = 71/367 (19%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
G + +VGSEVK PGDRV + P R + ++ G ++ W+ + K G +
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
++F V+ AD+ LP ++ LE M + ++ G H A+I
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQ 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
++V+++G G +GL+ + A+ GA RI+ V + AK GA +I+ I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
++V K+ G G+D G ++T+S A+ GG + +
Sbjct: 224 VDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
GM H + L P G R + + +++ ++D+ LVTH + GF
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
+EEA
Sbjct: 330 --IEEAL 334
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
IE+VG EV V GD VA+ P C +C+ G +LC ++
Sbjct: 73 KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
G+ A V+ P +KL ++E + A R+A++ P +T +++ G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
+ L + L +GK VKP++T +E EA +
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 162/367 (44%), Gaps = 71/367 (19%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
G + +VGSEVK PGDRV + P R + ++ G ++ W+ + K G +
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
++F V+ AD+ LP ++ LE M + ++ G H A+I
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQ 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
++V+++G G +GL+ + A+ GA RI+ V + AK GA +I+ I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
++V K+ G G+D G ++T+S A+ GG + +
Sbjct: 224 VDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
GM H + L P G R + + +++ ++D+ LVTH + GF
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
+EEA
Sbjct: 330 --IEEAL 334
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
L I +P GP V V+++A G+C +D+H D+ VK P + GHE G +
Sbjct: 15 LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
VGS V + GDRV VP A C C+HC G LC E + V+G
Sbjct: 71 AVGSGVSRVKEGDRVG-VPWLYSA------CGYCEHCLQGWETLC-EKQQNTGYSVNGGY 122
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
VV + LPD V E A +C ++V + + P V+I G G +G V
Sbjct: 123 GEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHV 181
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
+ ARA G R+ VD+DD +L++A+ +GA+ V+ N +D + +QK +G G
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAH 234
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
A K S A+G GG + L G+ + P+ ++ + + G
Sbjct: 235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 155/348 (44%), Gaps = 57/348 (16%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
PGDRV +VP A+ P WR + G + M KF V G +
Sbjct: 75 FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
V+ AD+ LP + LE M + ++ G H A+I ++V+++G G +GL+ +
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
A+ GA RI+ V + AK GA +I+ I ++V K+ G G+D
Sbjct: 185 GAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
G ++T+S A+ GG + + GM H + L P
Sbjct: 241 MAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
IE+VG EV V GD VA+ P C +C+ G +LC ++
Sbjct: 73 KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
G+ A V+ P +KL ++E + A R+A++ P +T +++ G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 240 GVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
+ L + L +GK VKP++T +E EA +
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
IE+VG EV V GD VA+ P C +C+ G +LC ++
Sbjct: 73 KIEEVGDEV--------VGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
G+ A V+ P +KL ++E + A R+A++ P +T +++ G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 240 GVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
+ L + L +GK VKP++T +E EA +
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 71/367 (19%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
G + +VGSEVK PGDRV + P R + ++ G ++ W+ + K G +
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
++F V+ AD+ LP ++ LE M + ++ G H A+I
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIE 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
++V+++G G +GL+ + A+ GA RI+ V + AK GA +I+ I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
++V K+ G G+D G ++T+S A+ GG + +
Sbjct: 224 EDQVMKLTN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
GM H + L P G R + +++ ++D+ LVTH + GF
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
+EEA
Sbjct: 330 --IEEAL 334
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 21/274 (7%)
Query: 29 LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
L+I+ + P L G +DV+VR+ G+C +D+H ++ + K P +GHE G IE+
Sbjct: 28 LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87
Query: 88 VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
V V+ L GD V L P ++ C C+ G C ++F + G A
Sbjct: 88 VAEGVEGLEKGDPVI--------LHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFA 138
Query: 148 NQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGVHACRRA-----NIGPETNVLIMGAGPI 201
+ KLP ++S E+ PL+ G+ A R + P V I+G G +
Sbjct: 139 EFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGL 198
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + + ++ +DV + +L +A+ +GAD++V +D ++V ++ + G
Sbjct: 199 GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GR 253
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
G++V+ D G T+ G++ +VG G
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEVKTLV 96
P ++++++KA GICGSDVH +T + P+ +GHE +GV+ + G E
Sbjct: 55 PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 156
R + G+ V E + C C C G N C + V G+ A V A
Sbjct: 115 TNKRFEI--GEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKY 171
Query: 157 CFKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANIGPETNVLIMGAGPIGLVTML 207
+ L + + EG ++ EP SV +A R I P NV+I+G GPIGL +
Sbjct: 172 AWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVA 231
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
+ GA ++++ + + R ++AKE+GAD+++
Sbjct: 232 ILKHAGASKVILSEPSEVRRNLAKELGADHVI 263
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 28/338 (8%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
IE+VG EV V GD VA+ P C +C+ G +LC ++
Sbjct: 73 KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
G+ A V+ P +KL ++E + A R+A++ P +T +++ G +
Sbjct: 124 GAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 184 GTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
G+D D KT+S A GK VG+ ++ + E+ VG
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPLCL-ELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
+ L + L +GK VKP +T ++EEA E
Sbjct: 300 SDFLGIXRLAEAGK--VKPXIT-----KTXKLEEANEA 330
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+VLV++ A G+C +D+ +R + V P V+GHE +G+IE +G V L GD V
Sbjct: 33 EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------------------------KF 136
L G C +C C G C E F
Sbjct: 89 LSYG---------YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHF 139
Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH----ACRRA-NIGPET 191
FA S A + + K+ +V +E + PL G+ AC A + P +
Sbjct: 140 FA----QSSFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPAS 192
Query: 192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 251
+ + GAG +GL +LAA+ GA I+ VD+ + RL +AK++GA +++ T +
Sbjct: 193 SFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DP 247
Query: 252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
V I++ G++ + + G + + + A GK+ +VG
Sbjct: 248 VAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 13 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
AG++E VG V L GD V +P C C C + NLC +++
Sbjct: 69 GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 118
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
+ ++ + E + +SV G+
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
+ N QD ++ ++++ M G+D SF+C G K M AL A G
Sbjct: 239 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
+ A R +V +K T W P + S KI V VTH
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 346 GFSQKEVEEAFETSARG 362
F E+ +AFE G
Sbjct: 351 SFD--EINKAFELMHSG 365
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 13 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
AG++E VG V L GD V +P C C C + NLC +++
Sbjct: 69 GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 118
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
+ ++ + E + +SV G+
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
+ N QD ++ ++++ M G+D SF+C G K M AL A G
Sbjct: 239 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
+ A R +V +K T W P + S KI V VTH
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 346 GFSQKEVEEAFETSARG 362
F E+ +AFE G
Sbjct: 351 SFD--EINKAFELMHSG 365
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 12 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81 CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
AG++E VG V L GD V +P C C C + NLC +++
Sbjct: 68 GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 117
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
+ ++ + E + +SV G+
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
+ N QD ++ ++++ M G+D SF+C G K M AL A G
Sbjct: 238 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
+ A R +V +K T W P + S KI V VTH
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 346 GFSQKEVEEAFETSARG 362
F E+ +AFE G
Sbjct: 350 SFD--EINKAFELMHSG 364
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 51/359 (14%)
Query: 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
++V +++ A GICGSD LK + + F P+++GHE GV+E +G+ V + PGD+V
Sbjct: 35 HEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCVKPGDKV 90
Query: 102 T--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 159
VP C C CK N C + A + + ++ +
Sbjct: 91 IPLFVP----------QCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYN 140
Query: 160 LPDNVSLEEGAMCEPLSVG-------VHAC--------------RRANIGPETNVLIMGA 198
L + E + ++V + +C A + P + + G
Sbjct: 141 LMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL 200
Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQK 257
G +G ++ +A GA RI+ V + A E+GA + N +D + + E I +
Sbjct: 201 GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYEVICE 256
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMG---HHEMTVPLTPAAVREV-- 311
G+D + +CAG +TM AL +T C G ++G+ PL R +
Sbjct: 257 KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKG 316
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
V G F+ + L + ++ KI+V LV+ + Q + +AFE + G +M
Sbjct: 317 SVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INKAFELLSSGQGVRSIMI 372
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 49/346 (14%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+V +++ +C +D + T D P ++GHE AG++E VG V + GD V
Sbjct: 35 EVRIKILYTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV- 90
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSL 146
+P + C C CK G+ NLC +++ F+ P++ +
Sbjct: 91 -IPCYQA------ECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFM 143
Query: 147 ANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVGVHACRRANIGPETNVLIMG 197
VVH + K+ L++ + P +G A + P +NV I G
Sbjct: 144 GTSTFSQYTVVHDVSVA-KIDPTAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSNVAIFG 201
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
G +GL A+ GA RI+ +D+D + AK+ G + V + + I E + +
Sbjct: 202 LGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTD 261
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREV 311
G+D SF+C G M AL G G +VG+ G T P L V +
Sbjct: 262 G---GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKG 318
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
G F+ + P +E + +I V +TH E+ +AF+
Sbjct: 319 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EINKAFD 362
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 146/377 (38%), Gaps = 59/377 (15%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GH
Sbjct: 12 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81 CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
AG++E VG V L GD V +P C C C + NLC +++
Sbjct: 68 GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 117
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
+ ++ + E + +SV G+
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
+ N QD ++ ++++ M G+D SF+C G K M AL A G
Sbjct: 238 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
+ A R +V +K T W P + S KI V VTH
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 346 GFSQKEVEEAFETSARG 362
F E+ +AFE G
Sbjct: 350 SFD--EINKAFELMHSG 364
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 41/343 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L I+ E+ ++ +++ A G+C +D+++L + D P+V+GHE AG++E V
Sbjct: 21 LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
G V PG++V + + C C C+ + N C + +P V
Sbjct: 78 GPGVTEFQPGEKVIPLFISQ--------CGECRFCQSPKTNQCVKGWANESPDVMSPKET 129
Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH-----ACRRAN 186
+ + + + + ++V GV A A
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAK 189
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
+ P + + G G +GL ++ + GA RI+ VD++ + AK GA + V + + +
Sbjct: 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSE 249
Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG--HHEMTVPL 303
I++ + K+ G+D S +C G M AL + G G LVG H T P+
Sbjct: 250 PISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPI 306
Query: 304 TPAAVR--EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 344
A R + + G F+ K+ P ++ K+ + +THR
Sbjct: 307 QLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHR 349
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ +V +++ A GIC +D H +K V K P+++GHE G++E +
Sbjct: 21 FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89 GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------- 139
G V T+ PGD+V +P C C+ C+ NLC
Sbjct: 77 GEGVTTVKPGDKVIPLFLP----------QCRECNACRNPDGNLCIRSDITGRGVLADGT 126
Query: 140 -------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRA 185
PVH + V K+ D E+ + S G A +
Sbjct: 127 TRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTG 186
Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
+ P + ++ G G +GL ++ ++ GA RI+ +D++ + A +GA + +
Sbjct: 187 KVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDST 246
Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPL 303
+ I+E + ++ G + +F+ G +TM AL A+C G +VG+ +
Sbjct: 247 KPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 304 TPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
P + V G + ++ P + + K D+ L+TH F K++ E FE
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ +V +++ A GIC +D H +K V K P+++GHE G++E +
Sbjct: 21 FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89 GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------- 139
G V T+ PGD+V +P C C+ C+ NLC
Sbjct: 77 GEGVTTVKPGDKVIPLFLP----------QCRECNACRNPDGNLCIRSDITGRGVLADGT 126
Query: 140 -------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRA 185
PVH + V K+ D E+ + S G A +
Sbjct: 127 TRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTG 186
Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
+ P + ++ G G +GL ++ ++ GA RI+ +D++ + A +GA + +
Sbjct: 187 KVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDST 246
Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPL 303
+ I+E + ++ G + +F+ G +TM AL A+C G +VG+ +
Sbjct: 247 KPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 304 TPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
P + V G + ++ P + + K D+ L+TH F K++ E FE
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 50/361 (13%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+V V++ +C +D + T D P V+GHE AG++E VG V + PGD V
Sbjct: 53 EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV- 108
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSL 146
+P + C C CK G+ NLC +++ P++ +
Sbjct: 109 -IPCYQA------ECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFM 161
Query: 147 ANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVGVHACRRANIGPETNVLIMG 197
VVH + K+ LE+ + P +G A + P + V + G
Sbjct: 162 GTSTFSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFG 219
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
G +GL A+A GA RI+ +D+D + AK G + + Q I + + +
Sbjct: 220 LGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTD 279
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREV 311
G+D SF+C G M +AL G G +VG+ G T P L V +
Sbjct: 280 G---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKG 336
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
G F+ ++ P ++ +I V +TH + ++ +AF+ G ++V+ +
Sbjct: 337 TAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DINKAFDL-MHDGDCLRVVLD 393
Query: 372 L 372
+
Sbjct: 394 M 394
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 32/312 (10%)
Query: 2 GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
G GMS+ +E+ V W + + PF + G DV ++ G+C SD+H
Sbjct: 1 GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60 YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCW 118
+K D+ P+V GHE G + +VGS+VK + GD+V + G V +C
Sbjct: 60 SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGV--GCLVG-----ACH 108
Query: 119 RCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA-- 170
C+ C N CP+M H G +N +V + PDN+ L+ GA
Sbjct: 109 SCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPL 168
Query: 171 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 230
+C ++V P ++ I+G G +G V + A+AFG+ VI +
Sbjct: 169 LCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL 228
Query: 231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC 290
K GAD+ + ++ + E++Q A GT +D D + G + GK+
Sbjct: 229 KNFGADSFL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLI 279
Query: 291 LVGMGHHEMTVP 302
LVG + +P
Sbjct: 280 LVGAPEKPLELP 291
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 55/315 (17%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
N + G L+++ P L + V++++ + ICGSD H + F+V
Sbjct: 3 NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72 KEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
+ V+GHE G + + GS+V+ + GD V+ VP + ++C RC +CK R ++C
Sbjct: 59 PKGHVLGHEITGEVVEKGSDVELMDIGDLVS-VPFN-------VACGRCRNCKEARSDVC 110
Query: 132 ------PEMKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEP 174
P+ F G A V+ P AD + K D E + +
Sbjct: 111 ENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDI 170
Query: 175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
L G H C A + P ++V I GAGP+G AR GA +++ D + RL + + G
Sbjct: 171 LPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG 230
Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGT-----GID-VSFDCAGL---------NKTMSTA 279
+ I +L++ A ++I + +G G+D V F+ GL N +++
Sbjct: 231 FETI-----DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285
Query: 280 LGATCAGGKVCLVGM 294
AGG + + G+
Sbjct: 286 FDVVRAGGAIGIPGI 300
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 36/344 (10%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
+ LK+ +P G +D++VR AV + D L+T D P V + +GV+E
Sbjct: 39 HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87 KVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
VG V PGDRV T PG L PG GG + G
Sbjct: 97 AVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP--------------G 142
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
L+ VV P P ++ E + C L+ + ++ V++ G G +
Sbjct: 143 VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVA 202
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT- 261
L + A+A GA +++ +L A +GAD+ + L++ + VE++ G
Sbjct: 203 LFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALTGDR 256
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRYK 320
G D + AG + +L A G++ ++G + E++ P+ P ++ V G+
Sbjct: 257 GADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH 315
Query: 321 NTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 362
LE L ++ +KP++ R+ F+ EV EA RG
Sbjct: 316 RR---ALEDLVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 26/320 (8%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L I+ +P +VL+R+ G+C +D+ K + A + P+++GHE AG I +V
Sbjct: 16 LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
G K + GD V + C +C+ G++N+C G
Sbjct: 75 GELAK---------VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEY 125
Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGAGPIGLV 204
+V + KL +E + + + + A R+A + E V++ G G + +
Sbjct: 126 MLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVY 185
Query: 205 TMLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
T+ +A I IV + + A E+GAD + + ++D + K+ +G
Sbjct: 186 TIQILKAL-MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGAS 240
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKN 321
I + D G +T G + LVGM +++ AV ++G + N
Sbjct: 241 I--AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLN 298
Query: 322 TWPLCLELLRSGKIDVKPLV 341
+ L SGKI KP +
Sbjct: 299 DLEDVVRLSESGKI--KPYI 316
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
N LG +++Q + P + + V++++ + ICGSD H ++ A
Sbjct: 3 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
+V+GHE G + + G +V+ L GD V+ VP + ++C RC CK +
Sbjct: 62 ---GLVLGHEITGEVIEKGRDVENLQIGDLVS-VPFN-------VACGRCRSCKEMHTGV 110
Query: 131 CPEMK---------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEP 174
C + + G A V+ P AD KLPD E + +
Sbjct: 111 CLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDI 170
Query: 175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
L G H A +GP + V + GAGP+GL +AR GA +++ D++ RL+ AK G
Sbjct: 171 LPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG 230
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 38 SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
S GP V +R A+G+ D ++ + V + P+V+G E A V+E+VG V
Sbjct: 25 SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 157
G+RV +C PP+ G+ + + ++PA+
Sbjct: 85 GERVC-------------TC---------------------LPPL-GAYSQERLYPAEKL 109
Query: 158 FKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLI-MGAGPIGLVTMLAARAF 212
K+P ++ L++ G M + ++ + + P VLI AG +G + + AR
Sbjct: 110 IKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL 169
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
GA I V ++ + A+++G + + ST QD AE V +I G G+DV +D G
Sbjct: 170 GATVIGTVSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIG 223
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 31/250 (12%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
K F ++GP DVL+ + GIC SD+H A KE PM+ GHE AG+I
Sbjct: 17 FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86 EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------KFF 137
++VG VK GD V + G V SC C CK + C ++ F
Sbjct: 71 KEVGKGVKKFKIGDVVGV--GCFVN-----SCKACKPCKEHQEQFCTKVVFTYDCLDSFH 123
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI 195
P G +N +V + + N LE+ A +C ++ + + + T V +
Sbjct: 124 DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGV 182
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
G G +G + + A A GA + + ++++ A +G + T+ + EE++ I
Sbjct: 183 AGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFI 238
Query: 256 QKAMGTGIDV 265
+ T D+
Sbjct: 239 ISTIPTHYDL 248
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 132/338 (39%), Gaps = 68/338 (20%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
G + +K + + +PS+ ++L++ K G V+Y+++ R + ++P V+G E +G
Sbjct: 19 GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
+ G V GD+V + A IS + PV
Sbjct: 74 TVVAKGKGVTNFEVGDQVAYISNSTFAQYSKIS---------------------SQGPV- 111
Query: 144 GSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMGA 198
KLP S EE + + L+ ++ VL+ A
Sbjct: 112 --------------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAA 157
Query: 199 -GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
G +GL+ + GA I + D+ +L +AKE GA+ ++ S +DI +V K
Sbjct: 158 AGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN 214
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP------LTPAAVREV 311
G G+D SFD G + T +L A G V G+ +P L+P + V
Sbjct: 215 --GKGVDASFDSVGKD-TFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPKNITLV 269
Query: 312 --DVVGVFRYKNTWPLCLE----LLRSGKIDVKPLVTH 343
+ G W + L+ S K+++K T+
Sbjct: 270 RPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G L+ FE + GP V+VR KA+G+ D +Y L A F+ P +G E AGV
Sbjct: 12 GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85 IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
+E VG EV GDRV + T P+ G
Sbjct: 69 VEAVGDEVTRFKVGDRVA----------------------------------YGTGPL-G 93
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI-MGAGPI 201
+ + V P KL D+VS E+ A M + L+V + + P +L AG +
Sbjct: 94 AYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + A+A GA I V + + + AK +GA + S +D+A+ V ++ G
Sbjct: 154 GSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GK 208
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
V +D G T T+L + G V G
Sbjct: 209 KCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFG 239
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 29/274 (10%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
L+ + +P ++L+ +K G+C +D+H D+ VK P+V GHE AGV+
Sbjct: 18 LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87 KVGSEVKTLVPGDR--VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
+G VK GD + + G SC C++C+ G + CP G
Sbjct: 74 GMGENVKGWKIGDYAGIKWLNG---------SCMACEYCELGNESNCPHADLSGYTH-DG 123
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGPI 201
S A +P L + A +C ++V A + AN+ V I G AG +
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGL 182
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
G + + A+A G R++ +D + + + + IG + + T +DI V K
Sbjct: 183 GSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAH 240
Query: 262 G-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
G I+VS A + + A G LVGM
Sbjct: 241 GVINVSVSEAAIEASTRYVR----ANGTTVLVGM 270
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 37/286 (12%)
Query: 42 YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
+D+ ++++A G+CGSD+H CA +K P+V+GHE G + K+G P
Sbjct: 34 HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLG-------PK 80
Query: 99 DRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVV 151
L G RV + + SC CD CK C + + P G AN V
Sbjct: 81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVR 140
Query: 152 HPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAA 209
+P+N+ A +C L+V R GP V I+G G IG + L +
Sbjct: 141 VHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLIS 199
Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
+A GA VI R K +GAD+ + EE + +K T D+ C
Sbjct: 200 KAMGAETYVISRSSRKREDAMK-MGADHYIAT-------LEEGDWGEKYFDT-FDLIVVC 250
Query: 270 AG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV 313
A + + A GG++ + + + L P ++ V +
Sbjct: 251 ASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSI 296
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 40 GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
GP DV + + G+C SD+H +++ P V GHE G + VG +V+ PGD
Sbjct: 46 GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-FFATP----PVH--GSLANQVVH 152
V + G V SC C+ C+ G N C M + +P P H G + Q+V
Sbjct: 103 LVGV--GCIVD-----SCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVV 155
Query: 153 PADLCFKLPDNVSLEEGAMCEPLSVG----VHACRRANIGPETNVLIMGAGPIGLVTMLA 208
++ E+ A PL R GP V ++G G +G + +
Sbjct: 156 HERYVLRI--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKL 213
Query: 209 ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
A A GA +V + + AK +GAD +V S N ++A ++ + T
Sbjct: 214 AHAMGA-HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAHLKSFDFILNT 264
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 52/221 (23%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
N K ++P +++LV+++++ + D R D V K P V+G + GV+E
Sbjct: 18 NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
VG+EV GD V + +P +GS
Sbjct: 73 SVGNEVTMFNQGDIVY---------------------------------YSGSPDQNGSN 99
Query: 147 ANQVVHPADLCFKLPDNVSLEEGAMCEPLS-----------VGVHACRRANIGPETNVLI 195
A + L K P N+S E+ A+ PL+ G+ R N G +T ++I
Sbjct: 100 AEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLII 157
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
GAG +G + A+A+G R++ + + K++GAD
Sbjct: 158 NGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
E+ + A+ +++ + ++P+L D+LV+ +A+GI D ++K
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75 MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
V G + AGVI KVG++V + G RV H R
Sbjct: 60 HVPGVDGAGVIVKVGAKVDSKXLGRRVAY------------------HTSLKR------- 94
Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNV 193
HGS A V D LPDN+S E A PL A + + + V
Sbjct: 95 --------HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREV 146
Query: 194 LIMGAGPI 201
LI+G G +
Sbjct: 147 LIVGFGAV 154
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 30/265 (11%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+ LVR VG+CG+D + ++ +V+GHE GV+ V L GD V
Sbjct: 27 EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIV- 83
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKL 160
VP R G + ++ + + ++ P+ +F V HG ++ P ++
Sbjct: 84 -VPTVRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI 138
Query: 161 PDNVSLEEGAMCEPLSVG------VHACRRANIGPETNVLIMGAGPIGLVT--MLAARAF 212
P + + E G + EP+S+ +A R A ++ ++G G +GL+T ML
Sbjct: 139 PRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197
Query: 213 GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
G + + D D + + +E+ A + T ++D+ + E+ +D ++
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEA 249
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM 294
G K ++ A G L+G+
Sbjct: 250 TGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 49/248 (19%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G+N L++ +P ++ +R+KA G+ D+ + D K P+V G EC+G+
Sbjct: 14 GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85 IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
+E +G VK GDRV M F +
Sbjct: 72 VEALGDSVKGYEIGDRV--------------------------------MAFVN----YN 95
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
+ A V P + +K+PD++S E A ++ V AN+ +VL+ AG G
Sbjct: 96 AWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-G 154
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAMGT 261
+ +A P + + A + I T+L D A+ V+++++
Sbjct: 155 VGQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAE 207
Query: 262 GIDVSFDC 269
G+D+ DC
Sbjct: 208 GVDIVLDC 215
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 135/350 (38%), Gaps = 60/350 (17%)
Query: 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
++ + +P LGP + LV + A + + VH L T R +D + +
Sbjct: 57 SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76 ---VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYN--- 129
VIG + AGV+ + G V GD V C + +N
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVV------------AHCLSVELESSDGHNDTM 164
Query: 130 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR----- 184
L PE + + G LA + ++ PD++S EE A P V A R+
Sbjct: 165 LDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRN 222
Query: 185 -ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
A + NVLI GA G +G A A GA I +V + + + +GA+ I+ +
Sbjct: 223 GAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRN 281
Query: 243 T---------NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGK 288
N QD +E ++ K + G ID+ F+ G +T ++ T GG
Sbjct: 282 AEGYRFWKDENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGT 339
Query: 289 V--CLVGMGH-HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 335
+ C G+ HE +++ + Y+ W L+ G+I
Sbjct: 340 ITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 57/289 (19%)
Query: 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
+ VL+++ A G+ + + +R + K P G + AGVIE VG GD
Sbjct: 58 HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 159
RV F + + G A + +K
Sbjct: 114 RV-----------------------------------FTSSTISGGYAEYALAADHTVYK 138
Query: 160 LPDNVSLEEGAMCE-PLSVGVHA-CRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPR 216
LP+ + ++GA P A A + +VL+ GA G +GL ARA+G
Sbjct: 139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKI 198
Query: 217 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKT 275
+ ++ + V + GA + N +++ ++KI+K +G GID+ + N
Sbjct: 199 LGTAGTEEGQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVN 251
Query: 276 MSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRYKNT 322
+S L GG+V +VG T+ + P +E ++GV + +T
Sbjct: 252 LSKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
+ LVR VG+ G+D + ++ +V+GHE GV+ V L GD V
Sbjct: 27 EALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIV- 83
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKL 160
VP R G + ++ + + ++ P+ +F V HG ++ P ++
Sbjct: 84 -VPTVRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI 138
Query: 161 PDNVSLEEGAMCEPLSVG------VHACRRANIGPETNVLIMGAGPIGLVT--MLAARAF 212
P + + E G + EP+S+ +A R A ++ ++G G +GL+T ML
Sbjct: 139 PRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197
Query: 213 GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
G + + D D + + +E+ A + T ++D+ + E+ +D ++
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEA 249
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM 294
G K ++ A G L+G+
Sbjct: 250 TGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 53/272 (19%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
GV + +L S G + +R GICG+D L TL + DF +V+
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE GV+E+ GD V +P +R C C +C GR + C E F
Sbjct: 65 GHEAIGVVEE---SYHGFSQGDLV--MPVNRRG------CGICRNCLVGRPDFC-ETGEF 112
Query: 138 ATPPVH---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGV 179
+H G + K+P ++ + G + +PL+ V V
Sbjct: 113 GEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPV 171
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
C + VL++G GPIG++ L R +G ++V E+ I
Sbjct: 172 WTCDDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIE 224
Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
+ TN + + +K++ ++G DV D G
Sbjct: 225 ETKTNYYNSSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 53/272 (19%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
GV + +L S G + +R GICG+D L TL + DF +V+
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
GHE GV+E+ GD V +P +R C C +C GR + C E F
Sbjct: 65 GHEAIGVVEE---SYHGFSQGDLV--MPVNRRG------CGICRNCLVGRPDFC-ETGEF 112
Query: 138 ATPPVH---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGV 179
+H G + K+P ++ + G + +PL+ V V
Sbjct: 113 GEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPV 171
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
C + VL++G GPIG++ L R +G ++V E+ I
Sbjct: 172 WTCDDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIE 224
Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
+ TN + + +K++ ++G DV D G
Sbjct: 225 ETKTNYYNSSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
A L G L E P GP V+V +KA G+C D YL T ++ P V G
Sbjct: 27 AQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPD--YLMTKGEYQLKMEPPFVPGI 84
Query: 80 ECAGVIEKV--GSEVKTLVPGDRV---TLVPG--DRVALEP 113
E AGV+ GS +K PGDRV + G +RVA+ P
Sbjct: 85 ETAGVVRSAPEGSGIK---PGDRVMAFNFIGGYAERVAVAP 122
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 30/192 (15%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----------HYLK-TLRCADFVVKEP 74
+L++ +P L P +VLV + A I + V H+LK R + +
Sbjct: 48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHD 107
Query: 75 M---VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
V+G +C+GV+ + G V+ PGD V + P EP H G L
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP------ATHGDG---MLG 158
Query: 132 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-----ACRRAN 186
E + + G LA V A P +++ EE A+ PL G + R A
Sbjct: 159 TEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQ 217
Query: 187 IGPETNVLIMGA 198
+ VLI GA
Sbjct: 218 MKQGDIVLIWGA 229
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 46/232 (19%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
++ V KA+GI D + L + P +G E AG++ KVGS VK + GDRV
Sbjct: 30 EIQVENKAIGINFIDTYIRSGLYPPPSL---PSGLGTEAAGIVSKVGSGVKHIKAGDRV- 85
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 162
V + + + H N+ AD LP
Sbjct: 86 ------VYAQSALGAYSSVH------NII----------------------ADKAAILPA 111
Query: 163 NVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI-MGAGPIGLVTMLAARAFGAPRIVI 219
+S E+ A + L+V + I P+ L AG +GL+ A+A GA I
Sbjct: 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGT 171
Query: 220 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
V S K GA ++ +D+ E +++I G + V +D G
Sbjct: 172 VGTAQKAQSALKA-GAWQVINYRE--EDLVERLKEITG--GKKVRVVYDSVG 218
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 35 ELPSLGP--YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
ELP P +D+LV +KAV + D K R + VIG++ AG++ VG +V
Sbjct: 44 ELPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDV 100
Query: 93 KTLVPGDRV 101
PGD V
Sbjct: 101 TLFRPGDEV 109
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 119/324 (36%), Gaps = 51/324 (15%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ I SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E + KVGS V +L GD V + WR H G + F
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWRT-HALGN------DDDFIKL 124
Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIM- 196
P S AN P+ +++ +GA PL+ + + P + I
Sbjct: 125 PNPAQSKAN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 174
Query: 197 -GAGPIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV-KVSTNLQDIAE 250
G +G + I ++ ++D+ S+ KE+GA ++ + N ++
Sbjct: 175 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSKEFGP 233
Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+++ K G ++ +C G + A G + GM +T+P + +
Sbjct: 234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 293
Query: 311 VDVVGVFRYKNTWPLCLELLRSGK 334
G + ELL++ K
Sbjct: 294 FTSAGFW--------VTELLKNNK 309
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 119/324 (36%), Gaps = 51/324 (15%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ I SD++ + K + F EP G+
Sbjct: 41 LFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGN 100
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E + KVGS V +L GD V + WR H G + F
Sbjct: 101 EGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWRT-HALGN------DDDFIKL 146
Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIM- 196
P S AN P+ +++ +GA PL+ + + P + I
Sbjct: 147 PNPAQSKAN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 196
Query: 197 -GAGPIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV-KVSTNLQDIAE 250
G +G + I ++ ++D+ S+ KE+GA ++ + N ++
Sbjct: 197 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSKEFGP 255
Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+++ K G ++ +C G + A G + GM +T+P + +
Sbjct: 256 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 315
Query: 311 VDVVGVFRYKNTWPLCLELLRSGK 334
G + ELL++ K
Sbjct: 316 FTSAGFW--------VTELLKNNK 331
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 119/324 (36%), Gaps = 51/324 (15%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E + KVGS V +L GD V + WR H G + F
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWRT-HALGN------DDDFIKL 124
Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIM- 196
P S AN P+ +++ +GA PL+ + + P + I
Sbjct: 125 PNPAQSKAN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 174
Query: 197 -GAGPIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV-KVSTNLQDIAE 250
G +G + I ++ ++D+ S+ KE+GA ++ + N ++
Sbjct: 175 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGP 233
Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+++ K G ++ +C G + A G + GM +T+P + +
Sbjct: 234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 293
Query: 311 VDVVGVFRYKNTWPLCLELLRSGK 334
G + ELL++ K
Sbjct: 294 FTSAGFW--------VTELLKNNK 309
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 119/324 (36%), Gaps = 51/324 (15%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E + KVGS V +L GD V + WR H G + F
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWRT-HALGN------DDDFIKL 124
Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIM- 196
P S AN P+ +++ +GA PL+ + + P + I
Sbjct: 125 PNPAQSKAN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 174
Query: 197 -GAGPIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV-KVSTNLQDIAE 250
G +G + I ++ ++D+ S+ KE+GA ++ + N ++
Sbjct: 175 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGP 233
Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+++ K G ++ +C G + A G + GM +T+P + +
Sbjct: 234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 293
Query: 311 VDVVGVFRYKNTWPLCLELLRSGK 334
G + ELL++ K
Sbjct: 294 FTSAGFW--------VTELLKNNK 309
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 119/324 (36%), Gaps = 51/324 (15%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 41 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGN 100
Query: 80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
E + KVGS V +L GD V + WR H G + F
Sbjct: 101 EGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWRT-HALGN------DDDFIKL 146
Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIM- 196
P S AN P+ +++ +GA PL+ + + P + I
Sbjct: 147 PNPAQSKAN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 196
Query: 197 -GAGPIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV-KVSTNLQDIAE 250
G +G + I ++ ++D+ S+ KE+GA ++ + N ++
Sbjct: 197 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGP 255
Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
+++ K G ++ +C G + A G + GM +T+P + +
Sbjct: 256 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 315
Query: 311 VDVVGVFRYKNTWPLCLELLRSGK 334
G + ELL++ K
Sbjct: 316 FTSAGFW--------VTELLKNNK 331
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 112 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 171
E G +R DH + Y +C + F +N++ H DL P+N+ +
Sbjct: 109 ENGFLPFRLDHIRKMAYQICKSVNFLH--------SNKLTH-TDL---KPENILFVQSDY 156
Query: 172 CEPLSVGVHACRRANIGPETNVLIMGAGPIG---LVTMLAARAFGAPRIVI 219
E + + R I P+ V+ G+ T+++ R + AP +++
Sbjct: 157 TEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL 207
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 42/227 (18%)
Query: 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE--VK 93
+P+ GP VL+++ I SDV ++K V P G E G I G E K
Sbjct: 44 VPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPA--GFEGVGTIVAGGDEPYAK 101
Query: 94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 153
+LV G RVA G+S W GS A V
Sbjct: 102 SLV---------GKRVAFATGLSNW-------------------------GSWAEYAVAE 127
Query: 154 ADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA 211
A C L D V E+GA + PL+ G + V GA + + + A+
Sbjct: 128 AAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQEGEKAFVXTAGASQLCKLIIGLAKE 187
Query: 212 FGAPRIVIVDVDDYRLSVAKEIGADNIV-KVSTNLQDIAEEVEKIQK 257
G IV V D+ ++++ K+IGA +++ + + + + EV K ++
Sbjct: 188 EGFRPIVTVRRDE-QIALLKDIGAAHVLNEKAPDFEATLREVXKAEQ 233
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 26/279 (9%)
Query: 34 FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
+ L GP DV +R+ GIC +D+H K L +++ PMV GHE G + +VGS+V
Sbjct: 27 YTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82
Query: 93 KTLVPGDRVTLVPGDRVALEPGISCWRC--DHC--KGGRYNLCPEMKFFATPPVHGSLAN 148
GD + V C R +C K YN + P G A
Sbjct: 83 SKFTVGD-IVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV----YINGQPTQGGFAK 137
Query: 149 QVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTM 206
V K+P+ +++E+ A +C ++V P I+G G +G + +
Sbjct: 138 ATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGV 197
Query: 207 LAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 266
A+A G VI + R +++GAD+ V I + K+ + + +D
Sbjct: 198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKMSE-LADSLDYV 248
Query: 267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
D ++ + L GK+ L+G+ ++ + LTP
Sbjct: 249 IDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
++++ EL ++ DV V+M A I SD++ ++ + + P V G+E + V
Sbjct: 42 VELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVVAV 99
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCD 121
GS V L PGD V +P + G+ WR +
Sbjct: 100 GSNVTGLKPGDWV--IPAN-----AGLGTWRTE 125
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
++++ EL ++ DV V+M A I SD++ ++ + + P V G+E + V
Sbjct: 29 VELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVVAV 86
Query: 89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCD 121
GS V L PGD V +P + G+ WR +
Sbjct: 87 GSNVTGLKPGDWV--IPAN-----AGLGTWRTE 112
>pdb|3CER|A Chain A, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|B Chain B, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|C Chain C, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|D Chain D, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|E Chain E, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
Length = 343
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
E V +A G N+++++ + + G ++V+ R+ V G DV KT R AD ++
Sbjct: 14 ESVTVAGIDCGTNSIRLKIARVDADGXHEVVPRILRVIRLGQDVD--KTHRFADEALERA 71
Query: 75 MVIGHECAGVI 85
V E AGVI
Sbjct: 72 YVAAREFAGVI 82
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI------- 85
P LP G D+LVR + VG+ SD++Y + D VK P IG E G +
Sbjct: 55 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALGLSA 110
Query: 86 ---EKVGSEVKTLVPGD--RVTLVP 105
VG V + PG T+VP
Sbjct: 111 SARYTVGQAVAYMAPGSFAEYTVVP 135
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI------- 85
P LP G D+LVR + VG+ SD++Y + D VK P IG E G +
Sbjct: 47 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALGLSA 102
Query: 86 ---EKVGSEVKTLVPGD--RVTLVP 105
VG V + PG T+VP
Sbjct: 103 SARYTVGQAVAYMAPGSFAEYTVVP 127
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI------- 85
P LP G D+LVR + VG+ SD++Y + D VK P IG E G +
Sbjct: 26 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALGLSA 81
Query: 86 ---EKVGSEVKTLVPGD--RVTLVPGDRVALEPGI 115
VG V + PG T+VP P +
Sbjct: 82 SARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSV 116
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P L V VR++AV I SD ++R F +G + AG + VGS+V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDT----SMR-GQFATPW-AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 156
GDRV G + +CP P G+ + V +
Sbjct: 86 VGDRV----------------------YGAQNEMCPRT------PDQGAFSQYTVTRGRV 117
Query: 157 CFKLPDNVSLEEGA 170
K+P +S E+ A
Sbjct: 118 WAKIPKGLSFEQAA 131
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 34/134 (25%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P L V VR++AV I SD T F +G + AG + VGS+V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSD-----TKMRGQFATPW-AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 156
GDRV G + +CP P G+ + V +
Sbjct: 86 VGDRV----------------------YGAQNEMCPRT------PDQGAFSQYTVTRGRV 117
Query: 157 CFKLPDNVSLEEGA 170
K+P +S E+ A
Sbjct: 118 WAKIPKGLSFEQAA 131
>pdb|1ZB7|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type G Light
Chain
Length = 455
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVS 266
K N QDIA + + A G+GID+S
Sbjct: 291 KALQNFQDIANRLNIVSSAQGSGIDIS 317
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 32 QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
+P LG +V + M+A G+ D L L V +G E AGV+ + G
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALGMYPGVAS----LGSEGAGVVVETGPG 282
Query: 92 VKTLVPGDRV 101
V L PGDRV
Sbjct: 283 VTGLAPGDRV 292
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 74 PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
P+ +G + +GV+ + G +VK PGD V
Sbjct: 95 PLTLGRDVSGVVMECGLDVKYFKPGDEV 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,527,474
Number of Sequences: 62578
Number of extensions: 495721
Number of successful extensions: 1829
Number of sequences better than 100.0: 121
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1466
Number of HSP's gapped (non-prelim): 154
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)